Miyakogusa Predicted Gene

Lj0g3v0150289.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150289.1 tr|C1EGE6|C1EGE6_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_103805,44.35,1e-18,seg,NULL; PAN_4,NULL,CUFF.9220.1
         (333 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33380.1 | Symbols:  | unknown protein; Has 194 Blast hits to...   369   e-102
AT4G33380.2 | Symbols:  | unknown protein; LOCATED IN: cellular_...   362   e-100

>AT4G33380.1 | Symbols:  | unknown protein; Has 194 Blast hits to
           189 proteins in 23 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other
           Eukaryotes - 10 (source: NCBI BLink). |
           chr4:16072064-16074605 FORWARD LENGTH=328
          Length = 328

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/338 (57%), Positives = 227/338 (67%), Gaps = 15/338 (4%)

Query: 1   MARG--EW-GAQRGKWICSYKKITLVVCFFNIAVALFCLRSLYAS-LYIYSGSVGRNIVV 56
           MARG  EW G   G  + S+K+ITL+VCFFNI +ALF LR LYAS L+IYS +   N+V 
Sbjct: 1   MARGGGEWTGGIAGTGVLSFKRITLLVCFFNILIALFVLRFLYASSLHIYSNN--DNVVK 58

Query: 57  YRPDQIRKMEESIQIRKSHKPVELIKWVEALGEEFSRDNVEVELPQHLKQKIVDEVLQRL 116
           Y  D+IRKMEESI+IR+S +P  +++ V+ L  E S      EL  ++K K+VDE+LQRL
Sbjct: 59  YTADEIRKMEESIRIRRSKEPTLILQLVKKLKHEVSTAESSTELSPNVKHKLVDEILQRL 118

Query: 117 GXXXXXXXXXXXXQVIVKERETVVNWRKEKLEEVKLAVTG-GASNSTISHEEAGMLVRAL 175
                          + + RE V  WR EKLEE K  + G    NST+  EEAGMLVRAL
Sbjct: 119 KSFEDKSN-------VTQLREVVETWRNEKLEEAKELIQGQNGVNSTLIVEEAGMLVRAL 171

Query: 176 ESDWGALSEELGLWIPVEVANEVHDDKXXXXXXXXXXXXXXXXXXXXCKTELHTDYGGTA 235
           E +W  LSEE+G W+P EV N  HDDK                    C  ELHTDYGG A
Sbjct: 172 ELEWDVLSEEIGFWLPAEVTNVEHDDKPEGEEEPEEILAGRPVPAV-CNAELHTDYGGAA 230

Query: 236 VRWGLTHHKDSAADCCQACLDHAKRAKEGDKKCNIWVYCPSEFGCHSPDIYQHKHQECWL 295
           VRWGLTHHK+SAADCCQACLD AKRAK G+ +CNIWVYCPSEFGC SPDIY+HKHQECWL
Sbjct: 231 VRWGLTHHKESAADCCQACLDQAKRAKPGETRCNIWVYCPSEFGCFSPDIYEHKHQECWL 290

Query: 296 KYDEKPKLNFKDRYPEWYRNSHPSAPVIVPWAAGVVGA 333
           KY EKPK NFKDRY E YRN+HP AP IVPW +GVV A
Sbjct: 291 KYAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVVTA 328


>AT4G33380.2 | Symbols:  | unknown protein; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: pollen tube. |
           chr4:16072064-16074605 FORWARD LENGTH=326
          Length = 326

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/338 (57%), Positives = 225/338 (66%), Gaps = 17/338 (5%)

Query: 1   MARG--EW-GAQRGKWICSYKKITLVVCFFNIAVALFCLRSLYAS-LYIYSGSVGRNIVV 56
           MARG  EW G   G  + S+K+ITL+VCFFNI +ALF LR LYAS L+IYS +   N+V 
Sbjct: 1   MARGGGEWTGGIAGTGVLSFKRITLLVCFFNILIALFVLRFLYASSLHIYSNN--DNVVK 58

Query: 57  YRPDQIRKMEESIQIRKSHKPVELIKWVEALGEEFSRDNVEVELPQHLKQKIVDEVLQRL 116
           Y  D+IRKMEESI+IR+S +P  +++    L  E S      EL  ++K K+VDE+LQRL
Sbjct: 59  YTADEIRKMEESIRIRRSKEPTLILQL--KLKHEVSTAESSTELSPNVKHKLVDEILQRL 116

Query: 117 GXXXXXXXXXXXXQVIVKERETVVNWRKEKLEEVKLAVTG-GASNSTISHEEAGMLVRAL 175
                          + + RE V  WR EKLEE K  + G    NST+  EEAGMLVRAL
Sbjct: 117 KSFEDKSN-------VTQLREVVETWRNEKLEEAKELIQGQNGVNSTLIVEEAGMLVRAL 169

Query: 176 ESDWGALSEELGLWIPVEVANEVHDDKXXXXXXXXXXXXXXXXXXXXCKTELHTDYGGTA 235
           E +W  LSEE+G W+P EV N  HDDK                    C  ELHTDYGG A
Sbjct: 170 ELEWDVLSEEIGFWLPAEVTNVEHDDKPEGEEEPEEILAGRPVPAV-CNAELHTDYGGAA 228

Query: 236 VRWGLTHHKDSAADCCQACLDHAKRAKEGDKKCNIWVYCPSEFGCHSPDIYQHKHQECWL 295
           VRWGLTHHK+SAADCCQACLD AKRAK G+ +CNIWVYCPSEFGC SPDIY+HKHQECWL
Sbjct: 229 VRWGLTHHKESAADCCQACLDQAKRAKPGETRCNIWVYCPSEFGCFSPDIYEHKHQECWL 288

Query: 296 KYDEKPKLNFKDRYPEWYRNSHPSAPVIVPWAAGVVGA 333
           KY EKPK NFKDRY E YRN+HP AP IVPW +GVV A
Sbjct: 289 KYAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVVTA 326