Miyakogusa Predicted Gene
- Lj0g3v0149819.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0149819.1 Non Chatacterized Hit- tr|D8RJ74|D8RJ74_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,22.12,2e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
N,CUFF.9180.1
(558 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 601 e-172
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 136 4e-32
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 9e-32
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 126 4e-29
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 123 3e-28
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 9e-28
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 9e-27
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 6e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 114 2e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 114 2e-25
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 113 3e-25
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 113 3e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 109 6e-24
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 7e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 1e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 107 2e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 106 5e-23
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 102 9e-22
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 3e-21
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 93 5e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 92 9e-19
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 91 2e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 89 7e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 85 1e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 80 3e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 77 2e-14
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 70 3e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 69 7e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 69 9e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 2e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 67 4e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 67 5e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 1e-10
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 62 9e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 62 1e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 58 2e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 57 3e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 55 9e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 55 1e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 54 3e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 54 3e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 53 5e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 53 5e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 51 2e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 51 3e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 50 3e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 50 3e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 50 3e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 49 7e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 601 bits (1549), Expect = e-172, Method: Compositional matrix adjust.
Identities = 292/558 (52%), Positives = 398/558 (71%), Gaps = 4/558 (0%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+VAGH+ +N ++EAWK+F SME +GIKPTWKSY++F+KELC++SR ++I+K+ ++M ASK
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
I IRD++F WVI+ +E GE KEK+ + K + E EE++
Sbjct: 534 IVIRDDIFSWVISSMEKNGE---KEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVD 590
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
D + V S + P L + DV E+CR+LSSS DW QE LEKS ++FTPE VVEV
Sbjct: 591 DYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEV 650
Query: 181 LQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYP 240
L+ G+ VL FFSWV K+ GYKH +E+YN++IK+A GKDFK MR+LF+EMRR
Sbjct: 651 LRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCL 710
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
+T +TW IMIM YGR GLTN+A+ FKE+K G PS ST+K LI LC +KGR V++A
Sbjct: 711 ITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEAT 770
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALC 360
+ + EMI +G VPD+EL++ YLGCLCEVG+ +A+ C DSL KIG+ V ++YS+ IRALC
Sbjct: 771 RTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALC 830
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
R GK+EEAL+ G E+S LDQ T GSI+H LL++G L+ AL K+++MK+ G K +
Sbjct: 831 RIGKLEEALSELASFEG-ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGV 889
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
HVYTSLIV+FFKEKQ+ K +E ++M+ EP+VVT +A+I GYM++ + +AWN F
Sbjct: 890 HVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRN 949
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
M+ +G PDF+TYS + CLC+ +SE+A+KL+ +MLD GI PSTINFRTVF+GLNREGK
Sbjct: 950 MEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Query: 541 RDLARVVLQQKSDLIRRR 558
DLAR+ LQ+KS L+ +R
Sbjct: 1010 HDLARIALQKKSALVAQR 1027
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 217/474 (45%), Gaps = 49/474 (10%)
Query: 116 EDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPE 175
ED + ++ E+VD S V VHE+ ++ ++++LEK + RF PE
Sbjct: 108 EDEKAQKVLHEEVDFSPV-----------VHEITSVVRGDDVLVSMEDRLEKLSFRFEPE 156
Query: 176 FVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMR 235
V VL+ C K H + FF+WV+++ G+ H YN + IA ++ + L EM
Sbjct: 157 IVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEME 216
Query: 236 RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC--GR-- 291
+N TWTI+I +YG+ + F++++ G+ + Y +I +LC GR
Sbjct: 217 KNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGD 276
Query: 292 -----------------------------KGRKVDDALKMYGEMINAGHVPDKELIETYL 322
K KVD + +M+ + + + L
Sbjct: 277 LALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 336
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPLSY-SLIIRALCRAGKVEEALALAGEVVGAEKS 381
C G + EA + LK + Y ++++ LCRA ++ +AL + + +
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD--IMKRRK 394
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
D G II LR+ + AL + + +K+ G + YT ++ H FK KQ K
Sbjct: 395 LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCN 454
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ EM ++G EP+ V +A++ G++ R +AW VF M+ KG P +++YS+ + LC
Sbjct: 455 LFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVV--LQQKSD 553
+ R +E +K+ +M IV F V + + G+++ ++ +Q++S+
Sbjct: 515 RSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSN 568
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 181/408 (44%), Gaps = 26/408 (6%)
Query: 162 QEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSG 221
+E L+ +R +VL+ N YG N L FF W+++QPG+KH +Y +
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
K F + L EM R+ + T+ +I YGR N AMN F +++ G P R TY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 282 KYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
LI K +D A+ MY M G PD + CL + G + A K +
Sbjct: 438 CTLIDIHA--KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 342 KKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR 400
G T L +Y++++ +A + AL L ++ A D+VT ++ L G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP-DKVTYSIVMEVLGHCGY 554
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
LE+A A M+Q+ VY L+ + K V KA + + M +G PNV TC++
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE------------- 507
L+ ++ V + +A+ + M G P +TY++LL+C C GRS+
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC-CTDGRSKLDMGFCGQLMAST 673
Query: 508 --EAMKLIFKMLDCGIVPSTI-----NFRTVFFGLNREGKRDLARVVL 548
A + KM G + NF + +RE KR L V+
Sbjct: 674 GHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVV 721
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y+ ++ L RA + L E+V + + VT +IH+ R L +A+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M++ G K Y +LI K + AM++ + MQ G P+ T S +I
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
A +F M +G P+ TY++++ K + A+KL M + G P + +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 531 VFFGLNREGKRDLARVV---LQQKS 552
V L G + A V +QQK+
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKN 569
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 181/408 (44%), Gaps = 26/408 (6%)
Query: 162 QEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSG 221
+E L+ +R +VL+ N YG N L FF W+++QPG+KH +Y +
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
K F + L EM R+ + T+ +I YGR N AMN F +++ G P R TY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 282 KYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
LI K +D A+ MY M G PD + CL + G + A K +
Sbjct: 438 CTLIDIHA--KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 342 KKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR 400
G T L +Y++++ +A + AL L ++ A D+VT ++ L G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP-DKVTYSIVMEVLGHCGY 554
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
LE+A A M+Q+ VY L+ + K V KA + + M +G PNV TC++
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE------------- 507
L+ ++ V + +A+ + M G P +TY++LL+C C GRS+
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC-CTDGRSKLDMGFCGQLMAST 673
Query: 508 --EAMKLIFKMLDCGIVPSTI-----NFRTVFFGLNREGKRDLARVVL 548
A + KM G + NF + +RE KR L V+
Sbjct: 674 GHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVV 721
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y+ ++ L RA + L E+V + + VT +IH+ R L +A+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M++ G K Y +LI K + AM++ + MQ G P+ T S +I
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
A +F M +G P+ TY++++ K + A+KL M + G P + +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 531 VFFGLNREGKRDLARVV---LQQKS 552
V L G + A V +QQK+
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKN 569
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 181/408 (44%), Gaps = 26/408 (6%)
Query: 162 QEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSG 221
+E L+ +R +VL+ N YG N L FF W+++QPG+KH +Y +
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
K F + L EM R+ + T+ +I YGR N AMN F +++ G P R TY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 282 KYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
LI K +D A+ MY M G PD + CL + G + A K +
Sbjct: 438 CTLIDIHA--KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 342 KKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR 400
G T L +Y++++ +A + AL L ++ A D+VT ++ L G
Sbjct: 496 VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP-DKVTYSIVMEVLGHCGY 554
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
LE+A A M+Q+ VY L+ + K V KA + + M +G PNV TC++
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE------------- 507
L+ ++ V + +A+ + M G P +TY++LL+C C GRS+
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC-CTDGRSKLDMGFCGQLMAST 673
Query: 508 --EAMKLIFKMLDCGIVPSTI-----NFRTVFFGLNREGKRDLARVVL 548
A + KM G + NF + +RE KR L V+
Sbjct: 674 GHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVV 721
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y+ ++ L RA + L E+V + + VT +IH+ R L +A+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M++ G K Y +LI K + AM++ + MQ G P+ T S +I
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
A +F M +G P+ TY++++ K + A+KL M + G P + +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 531 VFFGLNREGKRDLARVV---LQQKS 552
V L G + A V +QQK+
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKN 569
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 189/385 (49%), Gaps = 13/385 (3%)
Query: 155 SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH--NVLNFFSWVRKQPGYKHTAESYN 212
++D LIQ K E I F + +++ +K G +R + T +SYN
Sbjct: 129 TIDRLLIQMKDE--GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 186
Query: 213 LAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKAD 272
+ ++I VSG K N+F++M P T T+ +++ + + + A++ +++
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P+ Y+ LI +L K +V++AL++ EM G VPD E + LC+ +
Sbjct: 247 GCVPNSVIYQTLIHSL--SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 333 EARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
EA K + + G+ ++Y ++ LC+ G+V+ A L + E V ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE-----IVIFNTL 359
Query: 392 IHALLRKGRLEDALAKI-DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
IH + GRL+DA A + D + GI + Y SLI ++KE VG A+E++ +M+ G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+PNV + + L+ G+ + + +A+NV M G P+ ++ L++ CK R EA+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGL 535
++ +M G P F ++ GL
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGL 504
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 4/296 (1%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +I Y + GL +A+ +++ G P+ +Y L+ C K K+D+A +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC--KLGKIDEAYNVLN 448
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
EM G P+ + C+ + EA + + + G + +++ +I LC
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
+++ AL L +++ +E + VT ++I+A LR+G +++A ++ M QG L Y
Sbjct: 509 EIKHALWLLRDMI-SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
SLI + +V KA + E+M + G+ P+ ++C+ LI G +A M L
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+G PD T++ L+ LC+ GR E+ + + K+ GI P T+ F T+ L + G
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 148/299 (49%), Gaps = 7/299 (2%)
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
+MR ++TI++ + ++G + A N E+ ADG P+ + LI A C K
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC--K 471
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLS 351
++ +A++++ EM G PD + + LCEV + A + G ++
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
Y+ +I A R G+++EA L E+V + S LD++T S+I L R G ++ A + + M
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMV-FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+ G + LI + V +A+E +EM G P++VT ++LI G R
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
D +F +++ +G PD T++ L++ LCK G +A L+ + ++ G VP N RT
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP---NHRT 706
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 196/491 (39%), Gaps = 45/491 (9%)
Query: 9 NHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVF 68
N I A + + M G P Y I L K +R + L++L+EM E F
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 69 HWVITYLENKGEFAVKEKVQQMHTASKLAPEKFS--------------ESKKQVFVGIKV 114
+ VI L K+ AP+ + ++ K +F I
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 115 EEDV-------------RVDQLK---SEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDW 158
E V R+D K S+ V ++P + TY+ ++ + +
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL-IYGYWKEGLVGLAL 409
Query: 159 SLIQEKLEKSAIRFTPEFVVEVLQICNKYG-----HNVLNFFSWVRKQPGYKHTAESYNL 213
++ + K + + V C K G +NVLN S G K +N
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFC-KLGKIDEAYNVLNEMS----ADGLKPNTVGFNC 464
Query: 214 AIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADG 273
I +F EM R T+ +I + A+ +++ ++G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
+ TY LI A R+G ++ +A K+ EM+ G D+ + + LC G V +
Sbjct: 525 VVANTVTYNTLINAFL-RRG-EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 334 ARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII 392
AR + + + G+ +S +++I LCR+G VEEA+ E+V S+ D VT S+I
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV-LRGSTPDIVTFNSLI 641
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
+ L R GR+ED L ++ +GI + +L+ K V A +++E + G+
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 453 PNVVTCSALIR 463
PN T S L++
Sbjct: 702 PNHRTWSILLQ 712
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 191/402 (47%), Gaps = 42/402 (10%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFK--HMRNLFFEMRRNNYPVTSETWTI 248
L F W KQ Y+ ++ +AI I++ GK+ + N+F ++ + + + ++T
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I + G A+N FK+++ DG P+ TY +I+ + G+ G + + +M +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYN-VILNVFGKMGTPWNKITSLVEKMKS 272
Query: 309 AGHVPDKELIETYLGCLCEVGSV-LEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVE 366
G PD T + C C+ GS+ EA + + +K G++ ++Y+ ++ ++ + +
Sbjct: 273 DGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
EA+ + E+V S VT S+I A R G L++A+ + M ++G K + YT+L
Sbjct: 332 EAMKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN------------------V 468
+ F + +V AM I EEM+ +G +PN+ T +A I+ Y N +
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 469 ERPIDAWN-----------------VFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
I WN VF MK G P+ ET++ L++ + G E+AM
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 512 LIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
+ +MLD G+ P + TV L R G + + VL + D
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 137/606 (22%), Positives = 252/606 (41%), Gaps = 73/606 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCK-ASRTEDILKVLDEMQAS 59
+++ + EA +FK ME G KPT +Y V + K + I ++++M++
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 60 KIAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVR 119
IA ++ +IT K +H + A + F E K F KV +
Sbjct: 274 GIAPDAYTYNTLITCC----------KRGSLH---QEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 120 VD-------QLKSEKVDCSLVL----PHLKTYSER-DVHEVCRILSSSMDW-SLIQEKLE 166
+D ++ KV +VL P + TY+ + +L +M+ + + EK
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 167 KSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKH 226
K + FT ++ + K + ++ F +R G K ++N IK+ + F
Sbjct: 381 KPDV-FTYTTLLSGFERAGKV-ESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTE 437
Query: 227 MRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLII 286
M +F E+ TW ++ ++G+ G+ + FKE+K G+ P R T+ LI
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 287 AL--CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI 344
A CG + A+ +Y M++AG PD T L L G ++ K ++
Sbjct: 498 AYSRCG----SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED- 552
Query: 345 GYTVP--LSYSLIIRALCRAGKVEEALALAGEVVG------------------------- 377
G P L+Y ++ A ++ +LA EV
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 378 AEKS---------SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
AE++ S D T S++ R+ + A +D MK++G ++ Y SL+
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
+ GK+ EI+ E+ G +P++++ + +I Y R DA +F M+ G P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
D TY+ + EEA+ ++ M+ G P+ + ++ G + ++D A++ +
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 549 QQKSDL 554
+ +L
Sbjct: 793 EDLRNL 798
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 177/414 (42%), Gaps = 48/414 (11%)
Query: 155 SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH--NVLNFFSWVRKQPGYKHTAESYN 212
+ DW + Q+ + V ++ + K G + N F+ +++ G+ SY
Sbjct: 157 AFDWFMKQKDYQS---MLDNSVVAIIISMLGKEGRVSSAANMFNGLQED-GFSLDVYSYT 212
Query: 213 LAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT-NMAMNCFKEIKA 271
I + ++ N+F +M + T T+ +++ ++G++G N + +++K+
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 272 DGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
DG +P TY LI C ++G +A +++ EM AG DK L +
Sbjct: 273 DGIAPDAYTYNTLIT--CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 332 LEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSS-LDQVTCG 389
EA K + + G++ + +Y+ +I A R G ++EA+ L ++ AEK + D T
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM--AEKGTKPDVFTYT 388
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
+++ R G++E A++ + M+ G K I + + I + + + M+I +E+
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 450 GYEPNVVT-----------------------------------CSALIRGYMNVERPIDA 474
G P++VT + LI Y A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
V+ RM G PD TY+ +L L + G E++ K++ +M D P+ + +
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 164/360 (45%), Gaps = 12/360 (3%)
Query: 162 QEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSG 221
+E L R +VL+ + Y N L FF W+++QPG+KH +Y +
Sbjct: 314 EEALHNFGFRMDAYQANQVLKQMDNYA-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 372
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
K F + L EM R+ + T+ +I YGR AMN F +++ G P R TY
Sbjct: 373 KQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTY 432
Query: 282 KYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
LI K +D A+ MY M AG PD + CL + G + A + +
Sbjct: 433 CTLIDIHA--KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEM 490
Query: 342 KKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR 400
G T L +++++I +A E AL L ++ A D+VT ++ L G
Sbjct: 491 VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP-DKVTYSIVMEVLGHCGF 549
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
LE+A M+++ VY L+ + K V KA + + M Q+G PNV TC++
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
L+ ++ V R +A+N+ M G P +TY++LL+C C RS F M CG
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSC-CTDARSN------FDMGFCG 662
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+Q G K H YT+++ + + KQ G+ ++++EM + G +PN VT + LI Y
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+A NVF +M+ G PD TY L+ K G + AM + +M + G+ P T + +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 532 FFGLNREG 539
L + G
Sbjct: 471 INCLGKAG 478
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
D T +++ L R + + +D M + G K Y LI + + + +AM +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 444 EEMQQSGYEPNVVTCSALI-----RGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
+MQ++G EP+ VT LI G++++ A +++ RM+ G PD TYS+++
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDI-----AMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
CL K G A +L +M+ G P+ + F
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTF 502
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 6/213 (2%)
Query: 314 DKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALA 372
D T +G L E K D + + G ++Y+ +I + RA ++EA+ +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 373 GEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF 430
++ G E D+VT ++I + G L+ A+ M++ G+ Y+ +I
Sbjct: 418 NQMQEAGCEP---DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 431 FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
K + A + EM G PN+VT + +I + A ++ M+ G PD
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
TYS+++ L G EEA + +M VP
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 197/437 (45%), Gaps = 42/437 (9%)
Query: 141 SERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRK 200
+ +D +C+IL+ D S ++ L +++++ +P + EVL+ + G L+ F W
Sbjct: 62 ASQDAERICKILTKFTD-SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 120
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
Q G+KHT +YN I+ K FK + +L +M+ ++ ET+ ++ Y R
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVK 179
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
A+ F +++ G+ S + ++ L K R V DA K++ +M PD +
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLS--KSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEV---- 375
L + ++L + +K G+ + +Y +II A C+A K EEA+ E+
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 376 --------------VGAEKS----------------SLDQVTCGSIIHALLRKGRLEDAL 405
+G+EK L+ T +++ A R+EDA
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAY 357
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+D M+ +G+ Y ++ H + ++ +A E+ + M EP V T ++R +
Sbjct: 358 KTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMF 414
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
N ER A ++ MK KG P +S L+T LC + +EA + +MLD GI P
Sbjct: 415 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPG 474
Query: 526 INFRTVFFGLNREGKRD 542
F + L EG++D
Sbjct: 475 HMFSRLKQTLLDEGRKD 491
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 176/441 (39%), Gaps = 55/441 (12%)
Query: 14 AWKIFKSMEYQ-GIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVI 72
A +FK E Q G K T +Y I+ L K + + I ++D+M+A K+ + E F +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALIS 169
Query: 73 TYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSL 132
+ VKE + H + K E D +
Sbjct: 170 RRYARARK--VKEAIGAFHKMEEFG-------------------------FKMESSDFNR 202
Query: 133 VLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH--N 190
+L L R+V + ++ +K++K RF P+ + + +G N
Sbjct: 203 MLDTLS--KSRNVGDAQKVF----------DKMKKK--RFEPDIKSYTI-LLEGWGQELN 247
Query: 191 VLNFFSWVR--KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI 248
+L R K G++ +Y + I K ++ F EM + N + +
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I G N A+ F+ K+ G+ TY L+ A C ++++DA K EM
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW--SQRMEDAYKTVDEMRL 365
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEA 368
G P+ + L L + EA + ++ TV +Y +++R C +++ A
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS-CEPTVS-TYEIMVRMFCNKERLDMA 423
Query: 369 LALAGEVVGAEKSSLDQV-TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
+ + E+ G K L + S+I AL + +L++A + M GI+ H+++ L
Sbjct: 424 IKIWDEMKG--KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 481
Query: 428 VHFFKEKQVGKAMEIIEEMQQ 448
E + K +++ +M +
Sbjct: 482 QTLLDEGRKDKVTDLVVKMDR 502
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 103 ESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSE--RDVHEVCRILSSSMDWS- 159
E V ++ +R+ +S S + L + SE RDV +V + +S + S
Sbjct: 24 ECSSSATVWVRFNMTIRIINRQSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSP 83
Query: 160 --LIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKI 217
++ L++S +R + E V +VL G FF W KQ Y+H+ +Y++ I+
Sbjct: 84 QLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIES 143
Query: 218 AVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPS 277
+ +K M +L MR+ + ET+ I++ Y R + A+ F ++ P+
Sbjct: 144 TAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPN 202
Query: 278 RSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKC 337
+ L+ ALC K + V A +++ M + PD + L + ++ +AR+
Sbjct: 203 LVAFNGLLSALC--KSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 338 TDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC-------G 389
+ G + ++YS+++ LC+AG+V+EAL + S+D C
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIV--------RSMDPSICKPTTFIYS 311
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
++H + RLE+A+ M++ G+K + V+ SLI F K ++ +++EM+
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
G PN +C+ ++R + +A++VF +M +K PD +TY+M++ C+ E A
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETA 430
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
K+ M G+ PS F + GL E A V+L++
Sbjct: 431 DKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 6/344 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G++ + ++Y+ + +D + L EM T+TI I + GR G N A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
K + +G P TY LI ALC RK+D A +++ +M H PD+ T L
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALC--TARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ + ++ ++K G+ VP +++++++ ALC+AG EA +V+ +
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGH-VPDVVTFTILVDALCKAGNFGEAFDTL-DVMRDQG 393
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ T ++I LLR RL+DAL M+ G+K T + Y I ++ K A+
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
E E+M+ G PN+V C+A + R +A +FY +K G PD TY+M++ C
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
KVG +EA+KL+ +M++ G P I ++ L + + D A
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 137/558 (24%), Positives = 227/558 (40%), Gaps = 90/558 (16%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++AG I EA ++F+ M +G P ++ LCK LK+L +M
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
++ +I L G+ VKE + H KL F V +
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQ--VKEAMCFFHQMKKLVYPDF----------------VTL 680
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDW-----SLIQEKLEKSAIRFTPE 175
L V SL+ K + + C +++ W S++ E +A+ F+
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYN--CADQPANLFWEDLIGSILAEAGIDNAVSFSER 738
Query: 176 FVVEVLQICNKYGHNVL-----------------NFFSWVRKQPGYKHTAESYNLAIKIA 218
V IC + G ++L F K G + +YNL I
Sbjct: 739 LVAN--GIC-RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 219 VSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR 278
+ + +++F +++ T+ ++ YG+ G + +KE+ +
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 279 STYKYLIIALCGRKGRKVDDALKMYGEMINA----------GHVPD-----------KEL 317
T+ +I L K VDDAL +Y ++++ G + D K+L
Sbjct: 856 ITHNIVISGLV--KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 318 IETYL--GCL--CEVGSVL--------EARKCTDSLKKI---GYTVPL-SYSLIIRALCR 361
E L GC C + ++L EA K++ G L +YS+++ LC
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 362 AGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMK-QQGIKL 418
G+V+E L E+ ++S L D V II+ L + RLE+AL + MK +GI
Sbjct: 974 VGRVDEGLHYFKEL---KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 419 TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVF 478
++ Y SLI++ V +A +I E+Q++G EPNV T +ALIRGY +P A+ V+
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Query: 479 YRMKLKGPFPDFETYSML 496
M G P+ TY L
Sbjct: 1091 QTMVTGGFSPNTGTYEQL 1108
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 122/591 (20%), Positives = 231/591 (39%), Gaps = 101/591 (17%)
Query: 9 NHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVF 68
+ + EAWK+F M+ +KPT +Y + L K + ++ +++ + M F
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 69 HWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKV 128
+ + L E + K+ P+ F+ + + G+ +K+ +V
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN--TIIFGL----------VKNGQV 659
Query: 129 DCSLVLPH-LKTYSERDVHEVCRILSSSMDWSLIQEKL-----------EKSAIRFTPEF 176
++ H +K D +C +L + SLI++ ++ A F +
Sbjct: 660 KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 177 VVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAI-KIAVSGKDFKHMRNLFFEMR 235
+ +L + G + FS G +S + I + + + R LF +
Sbjct: 720 IGSILA---EAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776
Query: 236 RN-NYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
++ T+ ++I + +A + F ++K+ G P +TY +L+ A G+ G
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY-GKSG- 834
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL 354
K+D+ ++Y EM + H CE ++ ++++
Sbjct: 835 KIDELFELYKEM--STHE-------------CEANTI-------------------THNI 860
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
+I L +AG V++AL L +++ S T G +I L + GRL +A + M
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 415 GIKLTIHVYTSLIVHFFKEKQ-----------------------------------VGKA 439
G + +Y LI F K + V +
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL-KGPFPDFETYSMLLT 498
+ +E+++SG P+VV + +I G R +A +F MK +G PD TY+ L+
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
L G EEA K+ ++ G+ P+ F + G + GK + A V Q
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 143/636 (22%), Positives = 259/636 (40%), Gaps = 112/636 (17%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
I+EA++I K M+ +G P +YTV I LC A + + +V ++M+ + D V +
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK-PDRVTY- 331
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLK-----S 125
IT L+ + + V+Q +SE +K V V + VD L
Sbjct: 332 -ITLLDRFSDNRDLDSVKQF----------WSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 126 EKVDC------SLVLPHLKTYSERDVHEVCRILS-SSMDWSL-IQEKLEKSAIRFTPEFV 177
E D +LP+L TY+ +C +L +D +L + +E ++ T
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTL----ICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 178 VEVLQICNKYGHNVLNFFSWVR-KQPGYKHTAESYNLAI-KIAVSGKDFKHMRNLFFEMR 235
+ + K G +V ++ + K G + N ++ +A +G+D + + +F+ ++
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD-REAKQIFYGLK 495
Query: 236 RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADG---------------------- 273
S T+ +M+ Y ++G + A+ E+ +G
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 274 -------------YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
P+ TY L+ L G+ G K+ +A++++ M+ G P+ T
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGL-GKNG-KIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEAL--------- 369
CLC+ V A K + +G VP +Y+ II L + G+V+EA+
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Query: 370 ------ALAGEVVGAEKSSLDQ----------VTCGS---------IIHALLRKGRLEDA 404
L + G K+SL + C +I ++L + +++A
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 405 LAKIDAMKQQGI-KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS-GYEPNVVTCSALI 462
++ + + GI + + +I + K V A + E+ + G +P + T + LI
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 463 RGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
G + + A +VF ++K G PD TY+ LL K G+ +E +L +M
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 523 PSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRRR 558
+TI V GL + G D A L DL+ R
Sbjct: 853 ANTITHNIVISGLVKAGNVDDA---LDLYYDLMSDR 885
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL-AKID 409
+Y+ ++ A ++GK++E L E+ E + + +T +I L++ G ++DAL D
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEA-NTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M + T Y LI K ++ +A ++ E M G PN + LI G+
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
A +F RM +G PD +TYS+L+ CLC VGR +E + ++ + G+ P + +
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 530 TVFFGLNREGKRDLARVVLQQ 550
+ GL + + + A V+ +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNE 1021
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 12/327 (3%)
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
+MR + + + ++ +I L + AM ++ + +G+ PS TY L++ L R
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR- 236
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI-----GYT 347
R +D + + EM G P+ + T+ C+ +G + + + LK++ G
Sbjct: 237 -RDIDSVMGLLKEMETLGLKPN---VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 348 VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
V ++Y+++I ALC A K++ A + E + + D+VT +++ L+
Sbjct: 293 V-VTYTVLIDALCTARKLDCAKEVF-EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
M++ G + +T L+ K G+A + ++ M+ G PN+ T + LI G +
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
V R DA +F M+ G P TY + + K G S A++ KM GI P+ +
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 528 FRTVFFGLNREGKRDLARVVLQQKSDL 554
+ L + G+ A+ + D+
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDI 497
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%)
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
TC ++ AL G+LE+ D M+++ IK + Y ++ + + +A + +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
++ G+ N + + LI + +A V+ RM L+G P +TYS L+ L K
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
+ M L+ +M G+ P+ F L R GK + A +L++ D
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 12/400 (3%)
Query: 145 VHEVCRILSSSMDWSLIQEKLEKSAIRFTP----EFVVEVLQICNKYGHNVLNFFSWVRK 200
V+E+ R+LS D ++ LE + + ++P V +VL+ C G FF W R+
Sbjct: 38 VNEISRVLS---DHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARR 94
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNY-PVTSETWTIMIMLYGRIGLT 259
P + H+ ESY++ ++I S K F + + E R NY ++S+ + I+ Y R L
Sbjct: 95 IPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLP 154
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
+ A F + G P L+ +LC +K V+ A + +G+ G VP +
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKK--HVNHAQEFFGKAKGFGIVPSAKTYS 212
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGA 378
+ + ARK D + + V L+Y+ ++ ALC++G V+ + E +G
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE-MGN 271
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
D + IHA G + A +D MK+ + ++ + +I K ++V
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A +++EM Q G P+ T ++++ + + A + RM PD TY+M+L
Sbjct: 332 AYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
L ++GR + A ++ M + P+ + + GL R+
Sbjct: 392 LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK 431
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 195/437 (44%), Gaps = 37/437 (8%)
Query: 142 ERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQ 201
E H+V +L + +W L+ P +V+ + + FF WV K
Sbjct: 39 EVAAHDVASLLKTP-NWEK-NSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKH 96
Query: 202 PGYKHTAESYNLAIKIAVSG---------------------KDFKHMRNLFFEMR----- 235
Y N +K+ VS K+ + F E+R
Sbjct: 97 SSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGF 156
Query: 236 RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRK 295
R NYP ++ ++M ++ L +A ++ ++ADG+ Y+ ++ ALC K
Sbjct: 157 RLNYP----CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC--KNGY 210
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYS 353
+ A +++ G V D + + L C ++ +A K D + K P +SYS
Sbjct: 211 TEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYS 270
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
++I LC G++EEA L ++ G + T +I AL +G ++ A D M
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQM-GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
+G K +H YT LI ++ ++ +A + +M + P+V+T +ALI GY R +
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
A+ + M+ + P+ T++ L+ LC+VG+ +A+ L+ +MLD G+ P +++ +
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 534 GLNREGKRDLARVVLQQ 550
GL REG + A +L
Sbjct: 450 GLCREGHMNTAYKLLSS 466
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 196/436 (44%), Gaps = 10/436 (2%)
Query: 111 GIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAI 170
G+ + + ++V + S++V C+ P+ +YS +H +C + + L + EK
Sbjct: 243 GLNLRDALKVFDVMSKEVTCA---PNSVSYSIL-IHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 171 RFTPEFVVEVLQICNK-YGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRN 229
T + V + +C++ N F + + G K +Y + I +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR-GCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
+ +M ++ + T+ +I Y + G A ++ P+ T+ L+ LC
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
R G+ A+ + M++ G PD + LC G + A K S+
Sbjct: 418 -RVGKPYK-AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 350 -LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
L+++ II A C+ GK + A A G ++ + SLD+VT ++I + + G+ DAL +
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLML-RKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
+ + + I T H ++ K +V + + ++ ++ + G P+VVT + L+ G +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
++ + MKL G P+ Y++++ LC+ GR EEA KL+ M D G+ P+ + +
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 529 RTVFFGLNREGKRDLA 544
+ G GK D A
Sbjct: 655 TVMVKGYVNNGKLDRA 670
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 143/646 (22%), Positives = 244/646 (37%), Gaps = 172/646 (26%)
Query: 10 HISEAWKIFKSMEYQ-GIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVF 68
++ +A K+F M + P SY++ I LC+ R E+ + D+M +
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 69 HWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKV 128
+I L ++G L + F+ + + G K
Sbjct: 305 TVLIKALCDRG----------------LIDKAFNLFDEMIPRGCK--------------- 333
Query: 129 DCSLVLPHLKTYSE------RD-----VHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFV 177
P++ TY+ RD + VCR ++++++ S I +
Sbjct: 334 ------PNVHTYTVLIDGLCRDGKIEEANGVCR--------KMVKDRIFPSVITYNA--- 376
Query: 178 VEVLQICNKY---GHNVLNF-FSWVRKQPGYKHTAESYN-LAIKIAVSGKDFKHMRNLFF 232
+ N Y G V F V ++ K ++N L + GK +K + +L
Sbjct: 377 -----LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV-HLLK 430
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMA------MNCFKEIKADGYSPSRSTYKYLII 286
M N ++ ++I R G N A MNCF P T+ +I
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD------IEPDCLTFTAIIN 484
Query: 287 ALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG- 345
A C K K D A G M+ G D+ T + +C+VG +A ++L K+
Sbjct: 485 AFC--KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 346 YTVPLSYSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVT-----------CGS-- 390
T P S ++I+ L + KV+E LA+ G++ +G S + T GS
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 391 -------------------IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
II+ L + GR+E+A + AM+ G+ YT ++ +
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAW--NVFYRMKLKGPFPD 489
++ +A+E + M + GYE N S+L++G++ ++ ID + + L+ P+
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPE 722
Query: 490 F--ETYSM--------------LLTCLCKVGRSEEA------------------------ 509
E S+ L+T LCK GR++E+
Sbjct: 723 CINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMES 782
Query: 510 ----------MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
M+LI +L G VPS +F V GL +EG + AR
Sbjct: 783 YCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAR 828
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 5/379 (1%)
Query: 173 TPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFF 232
T EFV VL+ ++ ++ L FF+W R P Y T+ Y K S K ++ M +
Sbjct: 76 TSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILK 135
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI-KADGYSPSRSTYKYLIIALCGR 291
+M+ + ++ ET +I YG+ G + A+ F + K G + Y L+ ALC
Sbjct: 136 QMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDV 195
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL- 350
K A + MI G PDK + C G + EA++ D + + G+ P
Sbjct: 196 K--MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPAR 253
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
L+I L AG +E A + ++ D T +I A+ + G +E +
Sbjct: 254 GRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP-DIQTFNILIEAISKSGEVEFCIEMYYT 312
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
+ G+ + I Y +LI K ++ +A ++ + G++P + +I+G
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGM 372
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
DA++ F MK+K P+ Y+ML+T + G+ +A + +M + G+VP + F
Sbjct: 373 FDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDM 432
Query: 531 VFFGLNREGKRDLARVVLQ 549
V GL GK DLA + Q
Sbjct: 433 VTDGLKNGGKHDLAMRIEQ 451
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 200/437 (45%), Gaps = 33/437 (7%)
Query: 115 EEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSS-SMDWSLIQEK--LEKSAIR 171
+ED + +L+S + V+ + E H R+L + +D S K L++ +R
Sbjct: 47 DEDSNISELRSIDRE---VISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVR 103
Query: 172 FTPEFVVEVL------------QICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAV 219
+ V EVL C K + FF W +Q ++HT SY+L +KI
Sbjct: 104 VSGLLVREVLVGILRNLSYDNKARCAKLAYR---FFLWSGEQECFRHTVNSYHLLMKIFA 160
Query: 220 SGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRS 279
++K M L EM ++ +P T+ T+ ++I G GL A+ F + K Y P +
Sbjct: 161 ECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKH 220
Query: 280 TYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTD 339
+Y ++ +L G K K+ + + Y +M+ G PD L +G + + D
Sbjct: 221 SYNAILNSLLGVKQYKLIEWV--YKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFD 278
Query: 340 SLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALL 396
+ + G++ +Y++++ L + K AL + VG + S L T +I L
Sbjct: 279 EMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT---LIDGLS 335
Query: 397 RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVV 456
R G LE +D M + G + + YT +I + ++ KA E+ EM G PNV
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 457 TCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
T +++IRG +A + M+ +G P+F YS L++ L K G+ EA K+I +M
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Query: 517 LDCG----IVPSTINFR 529
+ G +VP + +R
Sbjct: 456 VKKGHYVHLVPKMMKYR 472
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 180/382 (47%), Gaps = 47/382 (12%)
Query: 205 KHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN-----NYPVTSETWTIMIMLYGRIGLT 259
K + +S+N + + ++ + H F++ N N ++ ++I ++
Sbjct: 145 KRSVKSFNSVLNVIIN-EGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFV 203
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
+ A+ F+ + P TY L+ LC K ++D+A+ + EM + G P +
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLC--KEERIDEAVLLLDEMQSEGCSPSPVIYN 261
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVG 377
+ LC+ G + K D++ G VP ++Y+ +I LC GK+++A++L +V
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKG-CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV- 319
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
+ K + VT G++I+ L+++ R DA+ + +M+++G L H+Y+ LI FKE +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPD-------- 489
+AM + +M + G +PN+V S L+ G +P +A + RM G P+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 490 ---FET------------------------YSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
F+T YS+L+ LC VGR +EAM + KML GI
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 523 PSTINFRTVFFGLNREGKRDLA 544
P T+ + ++ GL G D A
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAA 521
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 23/370 (6%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLY 253
F K +K + + I+ + DF + L +R N + ++ ++ Y
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 254 GRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH-- 311
G+ L + A++ F + D + RS + + L+ Y ++N+
Sbjct: 123 GKAHLPDKAVDLFHRM-VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM 181
Query: 312 --VPDKELIETYLGCLC---------EVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALC 360
P+ + LC EV + RKC GYT Y ++ LC
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPD----GYT----YCTLMDGLC 233
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
+ +++EA+ L E+ +E S V +I L +KG L +D M +G
Sbjct: 234 KEERIDEAVLLLDEM-QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
Y +LI + ++ KA+ ++E M S PN VT LI G + R DA +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
M+ +G + YS+L++ L K G++EEAM L KM + G P+ + + + GL REGK
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 541 RDLARVVLQQ 550
+ A+ +L +
Sbjct: 413 PNEAKEILNR 422
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P+ TY LI LC KG K+D A+ + M+++ +P+ T + L +
Sbjct: 287 GCVPNEVTYNTLIHGLC-LKG-KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 333 EARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
+A + S+++ GY + YS++I L + GK EEA++L ++ AEK + S+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM--AEKGCKPNIVVYSV 402
Query: 392 -IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+ L R+G+ +A ++ M G + Y+SL+ FFK +A+++ +EM ++G
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
N S LI G V R +A V+ +M G PD YS ++ LC +G + A+
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAAL 522
Query: 511 KLIFKML---DCGIVPSTINFRTVFFGLNREGKRDLARVV 547
KL +ML + P + + + GL + +D++R V
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ--KDISRAV 560
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/468 (20%), Positives = 187/468 (39%), Gaps = 46/468 (9%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+ A ++F+ M + P +Y + LCK R ++ + +LDEMQ+ + +++
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDC 130
+I L KG+ K+ P + + + + +K + D V L E++
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL--ERMVS 320
Query: 131 SLVLPHLKTYS--------ERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQ 182
S +P+ TY +R + R+LSS +E+ ++
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSS----------MEERGYHLNQHIYSVLIS 370
Query: 183 ICNKYGHNVLNFFSWVR-KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPV 241
K G W + + G K Y++ + + + M +
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 242 TSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALK 301
+ T++ ++ + + GL A+ +KE+ G S ++ Y LI LCG GR V +A+
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG-VGR-VKEAMM 488
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK------CTDSLKKIGYTVPLSYSLI 355
++ +M+ G PD + + LC +GS+ A K C + K V +Y+++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV--TYNIL 546
Query: 356 IRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQG 415
+ LC + A+ L ++ D +TC + ++ L K ++ K + ++
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLD-RGCDPDVITCNTFLNTLSEK---SNSCDKGRSFLEE- 601
Query: 416 IKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
L+V K ++V A I+E M P T + ++R
Sbjct: 602 ----------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVR 639
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 8/330 (2%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLY 253
FF W Q ++HTA Y+L +KI ++K M L EM ++ YP T+ T+ ++I
Sbjct: 138 FFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTC 197
Query: 254 GRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVP 313
G GL + F + K Y P + +Y ++ +L G K K+ D + Y +M+ G P
Sbjct: 198 GEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWV--YEQMLEDGFTP 255
Query: 314 DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALA 372
D + +G + D + K G++ L +Y++++ L K AL L
Sbjct: 256 DVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL 315
Query: 373 GEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF 430
+ VG E + T +I L R G+LE +D + G + YT +I +
Sbjct: 316 NHMREVGVEPGVIHFTT---LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGY 372
Query: 431 FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
++ KA E+ +EM + G PNV T +++IRG+ + +A + M+ +G P+F
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF 432
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
YS L+ L G+ EA +++ M++ G
Sbjct: 433 VVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 1/199 (0%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
Y L+++ G+ + L E++ + T +I G D + +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMI-KDGYPTTACTFNLLICTCGEAGLARDVVEQFIKS 213
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
K + H Y +++ KQ + E+M + G+ P+V+T + ++ + +
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ + M G PD TY++LL L + A+ L+ M + G+ P I+F T+
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 532 FFGLNREGKRDLARVVLQQ 550
GL+R GK + + + +
Sbjct: 334 IDGLSRAGKLEACKYFMDE 352
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 180/392 (45%), Gaps = 45/392 (11%)
Query: 167 KSAIRFTPEFVVEVLQI--CNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDF 224
K I+ +P FV VL+ + +FF W RKQ Y H E Y + + KD
Sbjct: 109 KFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDV 168
Query: 225 KHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYL 284
+R + E+++ +P+T +I +G++G+ + ++++K +G P+ TY +L
Sbjct: 169 DRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFL 228
Query: 285 IIALCGRKGRKVDDALKMYGEMINAGHV-PDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
+ L VD A +++ E++ +G + PD
Sbjct: 229 MNGLVS--AMFVDSAERVF-EVMESGRIKPDI---------------------------- 257
Query: 344 IGYTVPLSYSLIIRALCRAGKVEEALA--LAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
++Y+ +I+ C+AG+ ++A+ E G E D++T ++I A
Sbjct: 258 ------VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEA---DKITYMTMIQACYADSDF 308
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
+A M ++GI++ H ++ +I KE ++ + + E M + G +PNV + L
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
I GY DA + +RM +G PD TYS+++ LCK GR EEA+ G+
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428
Query: 522 VPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
+++ + ++ GL + G+ D A + ++ S+
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 160/353 (45%), Gaps = 5/353 (1%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
K+ G + T +YN + VS +F M T+ MI Y + G T
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
AM ++++ G+ + TY +I A + +Y EM G
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADS--DFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGA 378
+G LC+ G + E +++ + G ++ Y+++I ++G VE+A+ L ++
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID- 390
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
E D VT +++ L + GR+E+AL + G+ + Y+SLI K +V +
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK-GPFPDFETYSMLL 497
A + EEM + G + +ALI + + +A +F RM+ + G TY++LL
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 498 TCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ + K R+EEA+KL M+D GI P+ FR + GL GK A +L +
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 131/326 (40%), Gaps = 43/326 (13%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+F M R +T++I Y + G A+ + +G+ P TY ++ L
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
C K +V++AL + G + + + L + G V EA + + + + G T
Sbjct: 408 C--KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 349 -PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
Y+ +I A + KV+EA+AL R+E+
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALF--------------------------KRMEE---- 495
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
++G T++ YT L+ FKE + +A+++ + M G P AL G
Sbjct: 496 -----EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI-VPSTI 526
+ A + + G D M+ T LCK GR +EA KL + + G VP I
Sbjct: 551 SGKVARACKILDELAPMGVILDAACEDMINT-LCKAGRIKEACKLADGITERGREVPGRI 609
Query: 527 NFRTVFF-GLNREGKRDLARVVLQQK 551
RTV L + GK DLA ++ K
Sbjct: 610 --RTVMINALRKVGKADLAMKLMHSK 633
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 176/379 (46%), Gaps = 9/379 (2%)
Query: 165 LEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDF 224
L +S I P ++ VL C G+ FF W KQPGY H+ E + I + F
Sbjct: 88 LNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQF 147
Query: 225 KHMRNLFFEMRRNNYP-VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
+ L EMR+ N + E + +++ + + A+ E+ G P +
Sbjct: 148 GAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 207
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
L+ ALC K V +A K++ +M P+ + L C G ++EA++ +K+
Sbjct: 208 LLDALC--KNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 264
Query: 344 IGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI-IHALLR-KGR 400
G + ++ ++ AGK+ +A L ++ ++ V C ++ I AL R + R
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM--RKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
+++A+ M++ G + I YT+LI F K + K ++++M++ G P+ VT
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
++ + E+ + + +MK +G PD Y++++ CK+G +EA++L +M G
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 521 IVPSTINFRTVFFGLNREG 539
+ P F + G +G
Sbjct: 443 LSPGVDTFVIMINGFTSQG 461
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 172/357 (48%), Gaps = 14/357 (3%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM 251
+N F W++ Q Y + YN+ I++ R LFFEM++ + +ET+ +I
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALIN 186
Query: 252 LYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
+GR G AMN ++ +PSRSTY LI A CG G +AL++ +M + G
Sbjct: 187 AHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINA-CGSSG-NWREALEVCKKMTDNGV 244
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTD--SLKKIGYTVP--LSYSLIIRALCRAGKVEE 367
PD + T+ L S + K L K P ++++II L + G+ +
Sbjct: 245 GPD---LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 301
Query: 368 ALALAGEVVGAEKSS---LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
AL L + EK + D VT SI+H KG +E+ A +AM +G+K I Y
Sbjct: 302 ALDLFNSM--REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
+L+ + G A+ ++ +++Q+G P+VV+ + L+ Y +P A VF M+ +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
P+ TY+ L+ G EA+++ +M GI P+ ++ T+ +R K+
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 237/564 (42%), Gaps = 43/564 (7%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
M+ H N + +A +F M+ KP ++Y I +A + + ++D+M +
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
IA ++ +I + G + +V + T + + P+ + + V K
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI--VLSAYKSGRQYSK 266
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
E + + V P T++ ++ + ++ SS L EK A P+ VV
Sbjct: 267 ALSYFELMKGAKVRPDTTTFN-IIIYCLSKLGQSSQALDLFNSMREKRA-ECRPD-VVTF 323
Query: 181 LQICNKYG-----HNVLNFFSWVRKQPGYKHTAESYN-LAIKIAVSGKDFKHMRNLFFEM 234
I + Y N F + + G K SYN L AV G + ++ ++
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALMGAYAVHGMSGTAL-SVLGDI 381
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
++N ++T ++ YGR A F ++ + P+ TY LI A G G
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY-GSNGF 440
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS--- 351
+ +A++++ +M G P+ + V ++L A C+ S KK+ LS
Sbjct: 441 -LAEAVEIFRQMEQDGIKPN----------VVSVCTLLAA--CSRSKKKVNVDTVLSAAQ 487
Query: 352 ----------YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
Y+ I + A ++E+A+AL + + +K D VT +I R +
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALY-QSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
+A++ + M+ I LT VY+S++ + K+ QV +A I +M+ +G EP+V+ +++
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
+ Y E+ A +F M+ G PD S L+ K G+ L+ M + I
Sbjct: 607 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Query: 522 VPSTINFRTVFFGLN--REGKRDL 543
+ F +F N +E KR +
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAI 690
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 158/379 (41%), Gaps = 26/379 (6%)
Query: 179 EVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN 238
E L++C K N G ++N+ + SG+ + + F M+
Sbjct: 231 EALEVCKKMTDN------------GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS--PSRSTYKYLIIALCGRKGRKV 296
+ T+ I+I ++G ++ A++ F ++ P T+ I+ L KG ++
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS-IMHLYSVKG-EI 336
Query: 297 DDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSL 354
++ ++ M+ G P+ +G G A +K+ G +P +SY+
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG-IIPDVVSYTC 395
Query: 355 IIRALCRA---GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
++ + R+ GK +E + + E+ + VT ++I A G L +A+ M
Sbjct: 396 LLNSYGRSRQPGKAKEVFLM----MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+Q GIK + +L+ + K+ ++ Q G N ++ I Y+N
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
A ++ M+ K D T+++L++ C++ + EA+ + +M D I + + +V
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 532 FFGLNREGKRDLARVVLQQ 550
+++G+ A + Q
Sbjct: 572 LCAYSKQGQVTEAESIFNQ 590
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 109/578 (18%), Positives = 226/578 (39%), Gaps = 80/578 (13%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+++ + S S+A F+ M+ ++P ++ + I L K ++ L + + M+ +
Sbjct: 254 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 313
Query: 61 IAIRDEV--FHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK--------KQVFV 110
R +V F ++ KGE V + A L P S +
Sbjct: 314 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 373
Query: 111 GIKVEEDVRVDQLKSEKVDCSLVL-------------------------PHLKTYSER-D 144
+ V D++ + + + V + +L P++ TY+ D
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 433
Query: 145 VHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH--NVLNFFSWVRKQP 202
+ L+ +++ I ++E+ I+ V +L C++ NV S + +
Sbjct: 434 AYGSNGFLAEAVE---IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR- 489
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G +YN AI ++ + + L+ MR+ S T+TI+I R+ A
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
++ KE++ ++ Y ++ A K +V +A ++ +M AG PD
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYS--KQGQVTEAESIFNQMKMAGCEPD-------- 599
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSS 382
+ S+L A ++ + GK E L L E G E
Sbjct: 600 --VIAYTSMLHAYNASE---------------------KWGKACE-LFLEMEANGIEP-- 633
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
D + C +++ A + G+ + +D M+++ I T V+ + ++ +A+++
Sbjct: 634 -DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 692
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
I+ M ++ + ++ + + +FY++ G + +TY++LL L
Sbjct: 693 IQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLA 752
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVF-FGLNREG 539
VG + ++++ M GI PS +R + FG G
Sbjct: 753 VGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAG 790
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 136/580 (23%), Positives = 247/580 (42%), Gaps = 106/580 (18%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+ AWK F +E G+KP +YT I LCKA+R ++ +++ + ++ ++ ++
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFS--------ESKKQVFVGIKVEEDVRVDQ 122
+I + G+F + + A P + +V +KV E+++ D
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD- 372
Query: 123 LKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSL-IQEKLEKSAIRFTPEFVVEVL 181
P+L TY+ + +CR + +D + +++ ++K+ +
Sbjct: 373 ----------AAPNLSTYNIL-IDMLCR--AGKLDTAFELRDSMQKAGL----------- 408
Query: 182 QICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPV 241
F VR + N+ + + +F EM +Y V
Sbjct: 409 -------------FPNVR----------TVNIMVDRLCKSQKLDEACAMFEEM---DYKV 442
Query: 242 TSE---TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
+ T+ +I G++G + A ++++ + Y LI GRK +D
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH-GRK-ED 500
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK---------------- 342
K+Y +MIN PD +L+ TY+ C+ + G + R + +K
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 343 ---KIGY---TVPL--------------SYSLIIRALCRAGKVEEALALAGEVV--GAEK 380
K G+ T L +Y+++I C+ GKV +A L E+ G E
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ VT GS+I L + RL++A + K + I+L + +Y+SLI F K ++ +A
Sbjct: 621 TV---VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
I+EE+ Q G PN+ T ++L+ + E +A F MK P+ TY +L+ L
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
CKV + +A +M G+ PSTI++ T+ GL + G
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 132/590 (22%), Positives = 244/590 (41%), Gaps = 78/590 (13%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ + NH +F+ M+ G +PT +T I+ K R + L +LDEM++S
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
+ +++ I G+ + K A+ L P++ + + +G+ + + R+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS---MIGVLCKAN-RL 289
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
D E V+ + HL E++ C ++M SA +F + +
Sbjct: 290 D----EAVE---MFEHL----EKNRRVPCTYAYNTMIMGY------GSAGKFDEAYSLLE 332
Query: 181 LQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYP 240
Q + G + +YN + +F EM+++ P
Sbjct: 333 RQ-----------------RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP 375
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
S T+ I+I + R G + A ++ G P+ T ++ LC K +K+D+A
Sbjct: 376 NLS-TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC--KSQKLDEAC 432
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL-------KKIGYTVPLS-- 351
M+ EM PD+ + + L +VG V +A K + + I YT +
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 352 ------------YSLIIRALC---------------RAGKVEEALALAGEVVGAEKSSLD 384
Y +I C +AG+ E+ A+ E+ A + D
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPD 551
Query: 385 QVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
+ +IH L++ G + +MK+QG L Y +I F K +V KA +++E
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
EM+ G+EP VVT ++I G ++R +A+ +F K K + YS L+ KVG
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 505 RSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDL 554
R +EA ++ +++ G+ P+ + ++ L + + + A V Q +L
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 177/404 (43%), Gaps = 9/404 (2%)
Query: 135 PHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNF 194
P+ + + V+++C +L + + L + + PEFV+ VL+ K + + +
Sbjct: 26 PYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRL-KDVNRAIEY 84
Query: 195 FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
F W ++ H ESYN + + ++F + + EM + + T M++
Sbjct: 85 FRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCV 144
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
+ + + ++ + P+ S Y LI A D L ++ +M G+ P
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN--HSDMMLTLFQQMQELGYEPT 202
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAG 373
L T + + G V A D +K + Y++ I + + GKV+ A
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
E + A D+VT S+I L + RL++A+ + +++ + Y ++I+ +
Sbjct: 263 E-IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
+ +A ++E + G P+V+ + ++ + + +A VF MK K P+ TY
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTY 380
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNR 537
++L+ LC+ G+ + A +L M G+ P N RTV ++R
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFP---NVRTVNIMVDR 421
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 130/568 (22%), Positives = 241/568 (42%), Gaps = 65/568 (11%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
M+ G+ S EA+ + + +G P+ +Y + L K + ++ LKV +EM+
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
A ++ +I L G ++ TA +L + S K +F ++ ++ V
Sbjct: 374 -APNLSTYNILIDMLCRAG---------KLDTAFEL---RDSMQKAGLFPNVRTV-NIMV 419
Query: 121 DQL-KSEKVD--CSLVLPHLKTYSERDVHEVCRILSS------SMDWSLIQEKLEKSAIR 171
D+L KS+K+D C++ D C ++ D + EK+ S R
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 172 FTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLF 231
T V Y + NFF+ RK+ G+K +K M N
Sbjct: 480 -TNSIV---------YTSLIKNFFNHGRKEDGHKI-----------------YKDMIN-- 510
Query: 232 FEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGR 291
+N P T M ++ + G F+EIKA + P +Y LI L
Sbjct: 511 ----QNCSPDLQLLNTYMDCMF-KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI-- 563
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPL 350
K ++ +++ M G V D + C+ G V +A + + +K G+ +
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y +I L + +++EA L E +++ L+ V S+I + GR+++A ++
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
+ Q+G+ ++ + SL+ K +++ +A+ + M++ PN VT LI G V +
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
A+ + M+ +G P +Y+ +++ L K G EA L + G VP + +
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 531 VFFGLNREGKRDLARVVLQQKSDLIRRR 558
+ GL+ G R + L +++ RRR
Sbjct: 803 MIEGLSN-GNRAMDAFSLFEET---RRR 826
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 38/239 (15%)
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEV-VGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
P SY+ ++ + R + + GE+ V S++ TC ++ ++ +L +
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN--TCIEMVLGCVKANKLREGYDV 155
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
+ M++ + YT+LI F + + ++MQ+ GYEP V + LIRG+
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 468 VERP-------------------------ID----------AWNVFYRMKLKGPFPDFET 492
R ID AW F+ ++ G PD T
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQK 551
Y+ ++ LCK R +EA+++ + VP T + T+ G GK D A +L+++
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 171/358 (47%), Gaps = 27/358 (7%)
Query: 190 NVLNFFSW-VRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI 248
+ ++FF + VR +P Y TA N I + V +L+ +M P+ ++ I
Sbjct: 89 DAIDFFDYMVRSRPFY--TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I + + +++ F ++ G+ P T+ L+ LC ++ +AL ++G M+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED--RISEALALFGYMVE 204
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT-VPLSYSLIIRALCRAGKVEE 367
G LEA D + +IG T V ++++ +I LC G+V E
Sbjct: 205 TG--------------------FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A AL ++VG + +D VT G+I++ + + G + AL + M++ IK + +Y+++I
Sbjct: 245 AAALVNKMVG-KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
K+ A + EM + G PNV T + +I G+ + R DA + M +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
PD T++ L++ K G+ EA KL +ML I P T+ + ++ +G + + D A+
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 43/356 (12%)
Query: 223 DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYK 282
D K NL +M + ++ +I + G + A F E+ G +P+ TY
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK-CTDSL 341
+I C GR DA ++ +MI PD + + G + EA K C + L
Sbjct: 336 CMIDGFCSF-GR-WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 342 KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
+ + ++Y+ +I C+ + ++A + + +S D VT +II R R+
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRV 448
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
++ + + + ++G+ Y +LI F + + A ++ +EM G P+ +TC+ L
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 462 IRGYMNVER--------------PID---------------------AWNVFYRMKLKGP 486
+ G+ E+ ID AW++F + + G
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
PD +TY+++++ C +A L KM D G P + T+ G + G+ D
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P TY +I C K + DDA M+ M + PD T + C V E
Sbjct: 399 PDTVTYNSMIYGFC--KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 452
Query: 336 KCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHA 394
+ + + G +Y+ +I C + A L E++ + D +TC +++
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYG 511
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
+LE+AL + ++ I L Y +I K +V +A ++ + G EP+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
V T + +I G+ DA +F++MK G PD TY+ L+ K G +++++LI
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 515 KMLDCG 520
+M G
Sbjct: 632 EMRSNG 637
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 275 SPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEA 334
SP T+ +I C + ++VD+ +++ E+ G V + T + CEV ++ A
Sbjct: 429 SPDVVTFNTIIDVYC--RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 335 RKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH 393
+ + G ++ ++++ C K+EEAL L EV+ K LD V IIH
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIH 545
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
+ + ++++A ++ G++ + Y +I F + + A + +M+ +G+EP
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
+ T + LIRG + + + M+ G D T M +C+V E
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEE 659
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 25/235 (10%)
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSS 382
C C+ + + L K+G+ + +++ ++ LC ++ EALAL G +V
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV------ 203
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
G LE A+A D M + G+ + + +LI E +V +A +
Sbjct: 204 --------------ETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
+ +M G +VVT ++ G + A N+ +M+ PD YS ++ LCK
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRR 557
G +A L +ML+ GI P+ + + G G+ A+ +L+ D+I R
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR---DMIER 360
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 171/358 (47%), Gaps = 27/358 (7%)
Query: 190 NVLNFFSW-VRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI 248
+ ++FF + VR +P Y TA N I + V +L+ +M P+ ++ I
Sbjct: 89 DAIDFFDYMVRSRPFY--TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I + + +++ F ++ G+ P T+ L+ LC ++ +AL ++G M+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED--RISEALALFGYMVE 204
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT-VPLSYSLIIRALCRAGKVEE 367
G LEA D + +IG T V ++++ +I LC G+V E
Sbjct: 205 TG--------------------FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A AL ++VG + +D VT G+I++ + + G + AL + M++ IK + +Y+++I
Sbjct: 245 AAALVNKMVG-KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
K+ A + EM + G PNV T + +I G+ + R DA + M +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
PD T++ L++ K G+ EA KL +ML I P T+ + ++ +G + + D A+
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 43/356 (12%)
Query: 223 DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYK 282
D K NL +M + ++ +I + G + A F E+ G +P+ TY
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK-CTDSL 341
+I C GR DA ++ +MI PD + + G + EA K C + L
Sbjct: 336 CMIDGFCSF-GRW-SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 342 KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
+ + ++Y+ +I C+ + ++A + + +S D VT +II R R+
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRV 448
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
++ + + + ++G+ Y +LI F + + A ++ +EM G P+ +TC+ L
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 462 IRGYMNVER--------------PID---------------------AWNVFYRMKLKGP 486
+ G+ E+ ID AW++F + + G
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
PD +TY+++++ C +A L KM D G P + T+ G + G+ D
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 8/257 (3%)
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P TY +I C K + DDA M+ M + PD T + C V E
Sbjct: 399 PDTVTYNSMIYGFC--KHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 452
Query: 336 KCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHA 394
+ + + G +Y+ +I C + A L E++ + D +TC +++
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYG 511
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
+LE+AL + ++ I L Y +I K +V +A ++ + G EP+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
V T + +I G+ DA +F++MK G PD TY+ L+ K G +++++LI
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 515 KMLDCGIVPSTINFRTV 531
+M G + V
Sbjct: 632 EMRSNGFSGDAFTIKMV 648
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 25/235 (10%)
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSS 382
C C+ + + L K+G+ + +++ ++ LC ++ EALAL G +V
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV------ 203
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
G LE A+A D M + G+ + + +LI E +V +A +
Sbjct: 204 --------------ETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
+ +M G +VVT ++ G + A N+ +M+ PD YS ++ LCK
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRR 557
G +A L +ML+ GI P+ + + G G+ A+ +L+ D+I R
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR---DMIER 360
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 47/387 (12%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAI-KIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
L+FF + +KHT ++ + I K+A+ G+ ++ L +M+ + + + + +I
Sbjct: 60 LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQ-VDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 251 MLYGRIGLTNMAMNCF-----------------------------------KEIKADGYS 275
+Y ++GL A+ F +++K DG+
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P+ TY L+ ALC K KVD A K+ EM N G PD T + +CEVG V E R
Sbjct: 179 PNVFTYNVLLKALC--KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 336 KCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS-SLDQVTCGSIIHA 394
+ + + + Y+ +I LC+ + A L E+V EK S + ++ ++I+
Sbjct: 237 ELAERFEPVVSV----YNALINGLCKEHDYKGAFELMREMV--EKGISPNVISYSTLINV 290
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS-GYEP 453
L G++E A + + M ++G I+ +SL+ F A+++ +M + G +P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
NVV + L++G+ + + A +VF M+ G P+ TY L+ K G + A+ +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 514 FKMLDCGIVPSTINFRTVFFGLNREGK 540
KML G P+ + + + L R K
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSK 437
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 150/348 (43%), Gaps = 6/348 (1%)
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
++ YN I D+K L EM +++ +I + G +A
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 264 NCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA-GHVPDKELIETYL 322
+ ++ G P+ T L+ C +G D AL ++ +MI G P+ T +
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKG-CFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLV 359
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
C G++++A +++IG + + +Y +I + G ++ A+ + +++
Sbjct: 360 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML-TSGC 418
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
+ V +++ AL R + ++A + I+ M ++ ++ + + I ++ A +
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 442 IIEEM-QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+ +M QQ PN+VT + L+ G R +A+ + + ++G TY+ LL
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
C G A++L+ KM+ G P I + ++GK + A +L
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 13/270 (4%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A++ F ++ G SP+ TY LI R +D A+ ++ +M+ +G P+ +
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRG--SLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 322 LGCLCEVGSVLEARKCTDSLKK--IGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
+ LC EA + + K +VP +++ I+ LC AG+++ A + ++
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVP-TFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
+ + VT ++ L + R+E+A + +G++ + Y +L+ G A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMN---VERPIDAWNVFY--RMKLKGPFPDFETYS 494
++++ +M G P+ +T + +I Y ER ++ R K + PD +Y+
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWR---PDVISYT 604
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
++ LC+ E+ + L+ +M+ GIVPS
Sbjct: 605 NVIWGLCRSNCREDGVILLERMISAGIVPS 634
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/506 (19%), Positives = 216/506 (42%), Gaps = 28/506 (5%)
Query: 6 VSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRD 65
+ N I + +++ M+ G +P +Y V +K LCK ++ + K+L EM ++K D
Sbjct: 157 LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPD 215
Query: 66 EVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVR-VDQLK 124
V + T + + E + ++ +++ A + P + G+ E D + +L
Sbjct: 216 AVSY--TTVISSMCEVGLVKEGREL--AERFEP--VVSVYNALINGLCKEHDYKGAFELM 269
Query: 125 SEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEF--VVEVLQ 182
E V+ + P++ +YS ++ +C + +S + + L++ P + +++
Sbjct: 270 REMVE-KGISPNVISYSTL-INVLCNSGQIELAFSFLTQMLKRGC---HPNIYTLSSLVK 324
Query: 183 ICNKYG--HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYP 240
C G + L+ ++ + + G + +YN ++ S + ++F M
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
T+ +I + + G + A+ + ++ G P+ Y ++ ALC + K +A
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC--RHSKFKEAE 442
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRA 358
+ M P ++ LC+ G + A K +++ P ++Y+ ++
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 359 LCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
L +A ++EEA L E+ G E SS T +++H G AL + M G
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSS---STYNTLLHGSCNAGLPGIALQLVGKMMVDGK 559
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ--QSGYEPNVVTCSALIRGYMNVERPIDA 474
+I+ + K+ + +A ++++ + + + P+V++ + +I G D
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCL 500
+ RM G P T+S+L+ C
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCF 645
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG---KAMEIIEEMQ 447
+I L G+++ + MK QG + ++ S+I + +QVG +A+E+ ++
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY---RQVGLAERAVEMFYRIK 138
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
+ G +P+V + ++ + R + V+ MK G P+ TY++LL LCK + +
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 508 EAMKLIFKMLDCGIVPSTINFRTVF-----FGLNREGKRDLA 544
A KL+ +M + G P +++ TV GL +EG R+LA
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-RELA 239
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 171/378 (45%), Gaps = 8/378 (2%)
Query: 165 LEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDF 224
L +S + P + VL C G+ FF W KQP Y H+ E Y +KI + F
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQF 163
Query: 225 KHMRNLFFEMRRNNYP-VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
+ L EMR+ N + E + +++ + + A+ E+ G+ P +
Sbjct: 164 GAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGC 223
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
L+ ALC K V DA K++ +M V + G C VG ++EA+ + +
Sbjct: 224 LLDALC--KHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYG-WCRVGKMMEAKYVLVQMNE 280
Query: 344 IGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI-IHALLRKGRL 401
G+ + Y+ ++ AGK+ +A L ++ + C ++ I AL + R+
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM--RRRGFEPNANCYTVLIQALCKVDRM 338
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
E+A+ M++ + + YT+L+ F K ++ K ++++M + G P+ +T +
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHI 398
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
+ + E + + +M+ PD Y++++ CK+G +EA++L +M + G+
Sbjct: 399 MVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 458
Query: 522 VPSTINFRTVFFGLNREG 539
P F + GL +G
Sbjct: 459 SPGVDTFVIMINGLASQG 476
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 113/214 (52%), Gaps = 15/214 (7%)
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
P + ++++ A V++A+ + E+ G E D+ G ++ AL + G ++DA
Sbjct: 183 PELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP---DEYVFGCLLDALCKHGSVKDAAK 239
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME---IIEEMQQSGYEPNVVTCSALIR 463
+ M+ + + + +TSL+ + + VGK ME ++ +M ++G+EP++V + L+
Sbjct: 240 LFEDMRMR-FPVNLRYFTSLLYGWCR---VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
GY N + DA+++ M+ +G P+ Y++L+ LCKV R EEAMK+ +M
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 524 STINFRTVFFGLNREGKRDLARVVLQQKSDLIRR 557
+ + + G + GK D +VL D+I++
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVL---DDMIKK 386
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 4/312 (1%)
Query: 234 MRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
MR ++ + T+ IMI G ++A+ ++ +D P+ TY LI A G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSY 352
VD+ALK+ EM++ G PD T + +C+ G V A + +L+ G +SY
Sbjct: 244 --VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
++++RAL GK EE L ++ +EK + VT +I L R G++E+A+ + MK
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMF-SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
++G+ + Y LI F +E ++ A+E +E M G P++V + ++ +
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
A +F ++ G P+ +Y+ + + L G A+ +I +M+ GI P I + ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 533 FGLNREGKRDLA 544
L REG D A
Sbjct: 481 SCLCREGMVDEA 492
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 210/514 (40%), Gaps = 80/514 (15%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G + +I +A ++ + +E G +P +Y I CK +R +D +VLD M++
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
+ ++ +I L ++G+ + KV + P + + I +E
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYT-------ILIE----- 236
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
T E V E +++ + L + + I +
Sbjct: 237 -----------------ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI---------I 270
Query: 181 LQICNKYGHNVLNFFSWVR--KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN 238
+C K G V F VR + G + SYN+ ++ ++ ++ L +M
Sbjct: 271 RGMC-KEGM-VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
T++I+I R G AMN K +K G +P +Y LI A C R+GR +D
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-REGR-LDV 386
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRA 358
A++ MI+ G +PD ++Y+ ++
Sbjct: 387 AIEFLETMISDGCLPDI----------------------------------VNYNTVLAT 412
Query: 359 LCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKL 418
LC+ GK ++AL + G++ G S + + ++ AL G AL I M GI
Sbjct: 413 LCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 419 TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVF 478
Y S+I +E V +A E++ +M+ + P+VVT + ++ G+ R DA NV
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 479 YRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
M G P+ TY++L+ + G EAM+L
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 133/260 (51%), Gaps = 4/260 (1%)
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL 350
R G ++ +L + M+ G+ PD L + + ++ +A + + L+K G
Sbjct: 101 RSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y+ +I C+ ++++A + + + S D VT +I +L +G+L+ AL ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSP-DTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
+ + T+ YT LI E V +A+++++EM G +P++ T + +IRG M E
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG-MCKEG 277
Query: 471 PID-AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+D A+ + ++LKG PD +Y++LL L G+ EE KL+ KM P+ + +
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 530 TVFFGLNREGKRDLARVVLQ 549
+ L R+GK + A +L+
Sbjct: 338 ILITTLCRDGKIEEAMNLLK 357
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
I H R G ++L ++ M ++G + + T LI FF + + KA+ ++E +++ G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+P+V +ALI G+ + R DA V RM+ K PD TY++++ LC G+ + A+
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
K++ ++L P+ I + + EG D A
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 132/337 (39%), Gaps = 11/337 (3%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+ EA K+ M +G+KP +Y I+ +CK + +++ ++ ++
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPE--KFSESKKQVFVGIKVEEDVRVDQLKSEKV 128
++ L N+G++ EK+ + K P +S + K+EE + + +L EK
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 129 DCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQIC-NKY 187
+ P +Y + CR + ++ + + + + +C N
Sbjct: 364 ----LTPDAYSYDPL-IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 188 GHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWT 247
L F + + G + SYN S D ++ EM N T+
Sbjct: 419 ADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 248 IMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI 307
MI R G+ + A ++++ + PS TY +++ C K +++DA+ + M+
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC--KAHRIEDAINVLESMV 535
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI 344
G P++ + + G EA + + L +I
Sbjct: 536 GNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 147/308 (47%), Gaps = 4/308 (1%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGE 305
+TI I+ R A F+ +K G P+ TY +I C K V A +Y E
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC--KTGNVRQAYGLYKE 294
Query: 306 MINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGK 364
++ A +P+ + T + C+ ++ AR + K G L Y+ +I C++G
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
+ EA+ L E+ S D T +I+ L + ++ +A MK + I + Y
Sbjct: 355 MLEAVGLLSEMESLNLSP-DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
SLI + KE + +A+++ EM SG EPN++T S LI GY NV A +++ M +K
Sbjct: 414 SLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
G PD TY+ L+ K +EA++L ML+ GI P+ F + G +EG+ +A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 545 RVVLQQKS 552
Q+ +
Sbjct: 534 IDFYQENN 541
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 133/309 (43%), Gaps = 4/309 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K Y + I + +F M+++ T++ MI Y + G A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+KEI P+ + L+ C K R++ A ++ M+ G P+ + +
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFC--KARELVTARSLFVHMVKFGVDPNLYVYNCLI 346
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
C+ G++LEA ++ + + + +Y+++I LC +V EA L ++ E+
Sbjct: 347 HGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN-ERI 405
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
T S+IH ++ +E AL M G++ I +++LI + + + AM
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ EM G P+VVT +ALI + +A ++ M G P+ T++ L+
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 502 KVGRSEEAM 510
K GR A+
Sbjct: 526 KEGRLSVAI 534
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
+SL+I G EEAL ++ E+ K S D C SI++ L+R+ R + M
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREM----KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+G+ +H+Y L FK+ K ++++EM G +PNV + I +
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+A +F MK G P+ TYS ++ CK G +A L ++L ++P+ + F T+
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 532 FFGLNREGKRDLAR 545
G + + AR
Sbjct: 311 VDGFCKARELVTAR 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 8/302 (2%)
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNM--AMNCFKEIKADGYSPSRSTYKYLI 285
R+LF M + + V + +++G NM A+ E+++ SP TY LI
Sbjct: 324 RSLFVHMVK--FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
LC +V +A +++ +M N P + + C+ ++ +A + G
Sbjct: 382 NGLCIED--QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 346 YTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
+ ++S +I C ++ A+ L E+ + D VT ++I A ++ +++A
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT-IKGIVPDVVTYTALIDAHFKEANMKEA 498
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
L M + GI H + L+ F+KE ++ A++ +E Q N V + LI G
Sbjct: 499 LRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEG 558
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
+ A F M+ G PD +Y +L + R + M L M+ GI+P+
Sbjct: 559 LCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Query: 525 TI 526
+
Sbjct: 619 LL 620
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 191/476 (40%), Gaps = 27/476 (5%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G V R W ++ M +G+ P Y V + K K+LDEM +
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM--TS 227
Query: 61 IAIRDEVFHWVITYLE----NKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEE 116
+ I+ V+ + I L+ NK E A EK+ ++ + P ++ S + G
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEA--EKMFELMKKHGVLPNLYTYSA--MIDGYCKTG 283
Query: 117 DVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEF 176
+VR +++ + +LP++ + V C+ SL ++F +
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTL-VDGFCKARELVTARSLFVH-----MVKFGVDP 337
Query: 177 VVEVLQICNKYGH----NVLNFFSWVRKQPGYKHTAE--SYNLAIKIAVSGKDFKHMRNL 230
+ V C +GH N+L + + + + +Y + I L
Sbjct: 338 NLYVYN-CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 231 FFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCG 290
F +M+ +S T+ +I Y + A++ E+ A G P+ T+ LI C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEA-RKCTDSLKKIGYTVP 349
R + A+ +Y EM G VPD + + ++ EA R +D L+ +
Sbjct: 457 V--RDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+++ ++ + G++ A+ E ++S + V +I L + G + A
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQEN-NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
M+ GI I Y S++ +EK++ M + +M ++G PN++ L R Y
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFY 629
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKG-------RLEDALAKIDAMKQ 413
++ ++ A+ + GA K +L + S+I L R RL +AL I
Sbjct: 71 KSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDI----- 125
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
Q K +I V++ LI+ F + +A+ + EM+ S P+ C +++ G + R
Sbjct: 126 QSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDS 182
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
W + M +G PD Y +L C K G + KL+ +M GI P+ +
Sbjct: 183 VWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYIL 242
Query: 534 GLNREGKRDLA 544
L R+ K + A
Sbjct: 243 DLCRDNKMEEA 253
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 194/477 (40%), Gaps = 76/477 (15%)
Query: 145 VHEVCRILSSSMDWSLIQEKLEKSAIR-FTPEFVVEVLQICNKYGHNVLNFFSWVRKQPG 203
V EV R++ W+ E ++ +R P V VL+ + L FF W +Q
Sbjct: 144 VREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDE-RVALKFFYWADRQWR 202
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIG------ 257
Y+H Y +++ K + R + M+R T E ++ +++ Y R G
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 258 --LTNM---------------------------AMNCFKEIKADGYSPSRSTYKYLIIAL 288
LT M A+ + ++ G P+ TY +I
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
C +V++A+++ +M + G +PDK T +G LC+ ++E R + K V
Sbjct: 323 CDL--HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV 380
Query: 349 P-------------------------------------LSYSLIIRALCRAGKVEEALAL 371
P L YS I+ ALC+ G++ EA L
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 372 AGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
E++ D VT ++++ R G ++ A + M G K YT+L+
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFE 491
+ + +A E++ ++ + PN +T S ++ G + +A +V M LKG FP
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 492 TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
++LL LC+ GR+ EA K + + L+ G + +NF TV G + + D A VL
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 617
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 155/327 (47%), Gaps = 6/327 (1%)
Query: 227 MRNLFFEMRRNNYPVTSE-TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI 285
+R+L +M + + V + T+ +I + + + A+ K+ + G+ + Y ++
Sbjct: 366 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 425
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIET-YLGCLCEVGSVLEARKCTDSLKKI 344
ALC ++GR + +A + EM++ GH P + T + C +G V +A+K +
Sbjct: 426 HALC-KEGR-MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 345 GYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLED 403
G+ +SY+ ++ +CR GK EA + + S + +T I+H L R+G+L +
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMN-MSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
A + M +G L+ ++ + +A + +EE G NVV + +I
Sbjct: 543 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 602
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
G+ + A +V M L D TY+ L+ L K GR EA +L+ KML GI P
Sbjct: 603 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Query: 524 STINFRTVFFGLNREGKRDLARVVLQQ 550
+ + +RTV + GK D +L++
Sbjct: 663 TPVTYRTVIHRYCQMGKVDDLVAILEK 689
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 119/545 (21%), Positives = 232/545 (42%), Gaps = 52/545 (9%)
Query: 6 VSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRD 65
V N + +A + + M+ GI P +Y I+ C R E+ +++L++M SK + D
Sbjct: 288 VRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMH-SKGCLPD 346
Query: 66 EVFHWVIT-YL-ENKGEFAVKEKVQQMHTASKLAPEKFS-------------ESKKQVFV 110
+V ++ I YL + K V++ +++M L P++ + + F+
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Query: 111 GIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAI 170
E+ R+D+L + VH +C+ S LI E L K
Sbjct: 407 KDAQEKGFRIDKLGYSAI----------------VHALCKEGRMSEAKDLINEMLSKG-- 448
Query: 171 RFTPEFVVEVLQICNKYGH----NVLNFFSWVRKQPGYKHTAESYNLAIK-IAVSGKDFK 225
P VV + N + + V G+K SY + + +GK +
Sbjct: 449 -HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 226 HMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI 285
R + + + S T+++++ R G + A + +E+ G+ P L+
Sbjct: 508 -AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 566
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
+LC R GR +A K E +N G + T + C+ + A D + I
Sbjct: 567 QSLC-RDGR-THEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624
Query: 346 -YTVPLSYSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLE 402
+ +Y+ ++ L + G++ EA L +++ G + + VT ++IH + G+++
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP---VTYRTVIHRYCQMGKVD 681
Query: 403 DALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI 462
D +A ++ M + TI Y +I ++ +A ++ ++ ++ + TC AL+
Sbjct: 682 DLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 739
Query: 463 RGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG-I 521
GY+ P+ A+ V RM + PD + L L G+ +EA KL+ ++++ G I
Sbjct: 740 EGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHI 799
Query: 522 VPSTI 526
P ++
Sbjct: 800 SPQSL 804
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 177/377 (46%), Gaps = 26/377 (6%)
Query: 195 FSWVRKQ--PGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML 252
FS +R+ G+ +Y+ + + + LF EM+R T+TIM+
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 253 YGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHV 312
+ + GL A F E++ G +P+ TY LI A K +KV A +++ M++ G +
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL--KAKKVSYANELFETMLSEGCL 585
Query: 313 PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVP------------------LSYS 353
P+ + C+ G V +A C + G VP ++Y
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKA--CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
++ C++ +VEEA L + + E +Q+ ++I L + G+L++A M +
Sbjct: 644 ALLDGFCKSHRVEEARKLL-DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
G T++ Y+SLI +FK K+ A +++ +M ++ PNVV + +I G V + +
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
A+ + M+ KG P+ TY+ ++ +G+ E ++L+ +M G+ P+ + +R +
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 534 GLNREGKRDLARVVLQQ 550
+ G D+A +L++
Sbjct: 823 HCCKNGALDVAHNLLEE 839
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 196/442 (44%), Gaps = 28/442 (6%)
Query: 131 SLVLPHLKTYSERDVHEVCRILS-SSMDWSLIQEKLE-------KSAIRFTPEF------ 176
S + L Y +VH+V I++ SS+D I + + + + +F +F
Sbjct: 73 SFLHDSLVDYGNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSE 132
Query: 177 --VVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM 234
V+EVL++ + V++FF W +Q GYKHTA YN + + V D K ++
Sbjct: 133 SLVIEVLRLIAR-PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQI 191
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
R ++ V E +++ + R G ++A+ +K + PSRSTY LI A K
Sbjct: 192 RDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFL--KAD 249
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL 354
++D A ++ EM A D + + LC+VG EA ++ + TV Y+
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTV--FYTK 307
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
+I LC A EEA+ + A + VT +++ L K +L ++ M +
Sbjct: 308 LISGLCEASLFEEAMDFLNR-MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI------RGYMNV 468
G + ++ SL+ + A +++++M + G+ P V + LI + +N
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
+ A + M G + S CLC G+ E+A +I +M+ G +P T +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 529 RTVFFGLNREGKRDLARVVLQQ 550
V L K +LA ++ ++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEE 508
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 20/305 (6%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A + +E+ G+ P STY ++ LC K++ A ++ EM G V D
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLC--NASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ C+ G + +ARK + ++++G T + +Y+ +I A +A KV A L E + +E
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEG 583
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAM----------------KQQGIKLTIHVYT 424
+ VT ++I + G++E A + M + + Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
+L+ F K +V +A ++++ M G EPN + ALI G V + +A V M
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
G TYS L+ KV R + A K++ KML+ P+ + + + GL + GK D A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 545 RVVLQ 549
++Q
Sbjct: 764 YKLMQ 768
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 137/355 (38%), Gaps = 74/355 (20%)
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
FK+ + P+ TY L+ C K +V++A K+ M G P++ + + + L
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFC--KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 326 CEVGSVLEARKCTDSLKKIGYTVPLS---------------------------------- 351
C+VG + EA++ + + G+ L
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 352 --YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
Y+ +I LC+ GK +EA L +++ + + VT ++I G++E L ++
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY---- 465
M +G+ Y LI H K + A ++EEM+Q+ + + +I G+
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 863
Query: 466 -----------------------MNVERPIDAWNVFYRMKLKGPFPDFE--------TYS 494
+ ++ I A + ++L F TY+
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 923
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
L+ LC + E A +L +M G++P +F ++ GL R K A ++L
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 285 IIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI 344
I+ C + ++ AL G+MI GH P + L C V +A D + +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 345 GYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRL 401
GY + Y+ II LC++ +V+ AL L + EK + D VT S+I L GR
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM---EKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
DA + M ++ I + + +LI KE +V +A E EEM + +P++VT S L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
I G R +A +F M KG FPD TYS+L+ CK + E MKL +M G+
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 522 VPSTINFRTVFFGLNREGKRDLARVVLQQ 550
V +T+ + + G R GK ++A + ++
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 158/321 (49%), Gaps = 6/321 (1%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
L+ +M+ P T I++ + R ++A++ ++ G+ PS T+ L+ C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK--IGYT 347
+G +V DAL M+ +M+ G+ P+ + T + LC+ V A + ++K IG
Sbjct: 163 --RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 348 VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
V ++Y+ +I LC +G+ +A + + E D T ++I A +++GR+ +A
Sbjct: 221 V-VTYNSLISGLCSSGRWSDATRMVSCMTKREIYP-DVFTFNALIDACVKEGRVSEAEEF 278
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
+ M ++ + I Y+ LI ++ +A E+ M G P+VVT S LI GY
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
++ +F M +G + TY++L+ C+ G+ A ++ +M+ CG+ P+ I
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 528 FRTVFFGLNREGKRDLARVVL 548
+ + GL GK + A V+L
Sbjct: 399 YNVLLHGLCDNGKIEKALVIL 419
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 8/282 (2%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+ F ++ GY P+ Y +I LC K ++VD+AL + M G PD +
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLC--KSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 322 LGCLCEVGSVLEARKCTDSL-KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ LC G +A + + K+ Y +++ +I A + G+V EA E++ +
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI---R 284
Query: 381 SSLDQ--VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
SLD VT +I+ L RL++A M +G + Y+ LI + K K+V
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
M++ EM Q G N VT + LI+GY + A +F RM G P+ TY++LL
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
LC G+ E+A+ ++ M G+ + + + G+ + G+
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 148/329 (44%), Gaps = 16/329 (4%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI---MLYGRIGLT 259
GYK YN I K + +L M ++ T+ +I GR
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 260 NMAMNCF--KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKEL 317
++C +EI D + T+ LI A C ++GR V +A + Y EMI PD
Sbjct: 241 TRMVSCMTKREIYPDVF-----TFNALIDA-CVKEGR-VSEAEEFYEEMIRRSLDPDIVT 293
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVV 376
+ LC + EA + + G + ++YS++I C++ KVE + L E+
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM- 352
Query: 377 GAEKSSL-DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
+++ + + VT +I R G+L A M G+ I Y L+ +
Sbjct: 353 -SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 436 VGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSM 495
+ KA+ I+ +MQ++G + ++VT + +IRG DAW+++ + +G PD TY+
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 496 LLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
++ L K G EA L KM + GI+P+
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 389 GSIIHALLRKG----RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
GS +LR G +L+D+L M Q +I ++ L+ K K+ + + E
Sbjct: 46 GSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWE 105
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
+MQ G N+ TC+ L+ + + A + +M G P T+ LL C+
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 505 RSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
R +A+ + +M+ G P+ + + T+ GL + + D A +L +
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 225/528 (42%), Gaps = 77/528 (14%)
Query: 24 QGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYLENKGEFAV 83
+G+ P +T I CK + E+ +K+ +M+ + +A F+ VI L G +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY-- 311
Query: 84 KEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSER 143
E F +K V G++ P L TYS
Sbjct: 312 --------------DEAFMFKEKMVERGME---------------------PTLITYSIL 336
Query: 144 DVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPG 203
V + R + +++E +K F P +V Y + + +F
Sbjct: 337 -VKGLTRAKRIGDAYFVLKEMTKKG---FPPNVIV--------YNNLIDSFIE------- 377
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
A S N AI+I KD M +TS T+ +I Y + G + A
Sbjct: 378 ----AGSLNKAIEI----KDL---------MVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 264 NCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLG 323
KE+ + G++ ++ ++ +I LC D AL+ GEM+ P L+ T +
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSH--LMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTVPLSYS-LIIRALCRAGKVEEALALAGEVVGAEKSS 382
LC+ G +A + G+ V S ++ LC AGK++EA + E++G
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG-RGCV 537
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
+D+V+ ++I K +L++A +D M ++G+K + Y+ LI F +V +A++
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
++ +++G P+V T S +I G ER + F M K P+ Y+ L+ C+
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
GR A++L M GI P++ + ++ G++ + + A+++ ++
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 4/311 (1%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
L+F+ + V + T ++ G + A KEI G R +Y LI C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
G+K K+D+A EM+ G PD + L + V EA + D K+ G
Sbjct: 552 GKK--KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 350 L-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
+ +YS++I C+A + EE E++ ++ + V +I A R GRL AL
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
+ MK +GI YTSLI +V +A + EEM+ G EPNV +ALI GY +
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
+ + + M K P+ TY++++ + G EA +L+ +M + GIVP +I +
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 529 RTVFFGLNREG 539
+ +G ++G
Sbjct: 789 KEFIYGYLKQG 799
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL----KKIGYTVPLSYSL 354
AL ++ + N G P K L L E +KC ++ K + V L ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRAN---EFQKCCEAFDVVCKGVSPDVYL-FTT 265
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
I A C+ GKVEEA+ L ++ A + + VT ++I L GR ++A + M ++
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAP-NVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
G++ T+ Y+ L+ + K++G A +++EM + G+ PNV+ + LI ++ A
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ M KG TY+ L+ CK G+++ A +L+ +ML G + +F +V
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR--LEDALAKI 408
SY L+I L A + A + ++ ++ + CG LR R + DA+A +
Sbjct: 128 SYCLLIGLLLDANLLSAARVVLIRLING---NVPVLPCG------LRDSRVAIADAMASL 178
Query: 409 DAMKQQGIK-----LTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
+ I+ L I VY + FK A+++ + G P+ TC+ L+
Sbjct: 179 SLCFDEEIRRKMSDLLIEVYCTQ----FKRDGCYLALDVFPVLANKGMFPSKTTCNILLT 234
Query: 464 GYMNV---ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
+ ++ +A++V KG PD ++ + CK G+ EEA+KL KM + G
Sbjct: 235 SLVRANEFQKCCEAFDVV----CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 521 IVPSTINFRTVFFGLNREGKRDLA 544
+ P+ + F TV GL G+ D A
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEA 314
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 225/528 (42%), Gaps = 77/528 (14%)
Query: 24 QGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYLENKGEFAV 83
+G+ P +T I CK + E+ +K+ +M+ + +A F+ VI L G +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY-- 311
Query: 84 KEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSER 143
E F +K V G++ P L TYS
Sbjct: 312 --------------DEAFMFKEKMVERGME---------------------PTLITYSIL 336
Query: 144 DVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPG 203
V + R + +++E +K F P +V Y + + +F
Sbjct: 337 -VKGLTRAKRIGDAYFVLKEMTKKG---FPPNVIV--------YNNLIDSFIE------- 377
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
A S N AI+I KD M +TS T+ +I Y + G + A
Sbjct: 378 ----AGSLNKAIEI----KDL---------MVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 264 NCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLG 323
KE+ + G++ ++ ++ +I LC D AL+ GEM+ P L+ T +
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSH--LMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTVPLSYS-LIIRALCRAGKVEEALALAGEVVGAEKSS 382
LC+ G +A + G+ V S ++ LC AGK++EA + E++G
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG-RGCV 537
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
+D+V+ ++I K +L++A +D M ++G+K + Y+ LI F +V +A++
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
++ +++G P+V T S +I G ER + F M K P+ Y+ L+ C+
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
GR A++L M GI P++ + ++ G++ + + A+++ ++
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 4/311 (1%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
L+F+ + V + T ++ G + A KEI G R +Y LI C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
G+K K+D+A EM+ G PD + L + V EA + D K+ G
Sbjct: 552 GKK--KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 350 L-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
+ +YS++I C+A + EE E++ ++ + V +I A R GRL AL
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
+ MK +GI YTSLI +V +A + EEM+ G EPNV +ALI GY +
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
+ + + M K P+ TY++++ + G EA +L+ +M + GIVP +I +
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 529 RTVFFGLNREG 539
+ +G ++G
Sbjct: 789 KEFIYGYLKQG 799
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL----KKIGYTVPLSYSL 354
AL ++ + N G P K L L E +KC ++ K + V L ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRAN---EFQKCCEAFDVVCKGVSPDVYL-FTT 265
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
I A C+ GKVEEA+ L ++ A + + VT ++I L GR ++A + M ++
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAP-NVVTFNTVIDGLGMCGRYDEAFMFKEKMVER 324
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
G++ T+ Y+ L+ + K++G A +++EM + G+ PNV+ + LI ++ A
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ M KG TY+ L+ CK G+++ A +L+ +ML G + +F +V
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR--LEDALAKI 408
SY L+I L A + A + ++ ++ + CG LR R + DA+A +
Sbjct: 128 SYCLLIGLLLDANLLSAARVVLIRLING---NVPVLPCG------LRDSRVAIADAMASL 178
Query: 409 DAMKQQGIK-----LTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
+ I+ L I VY + FK A+++ + G P+ TC+ L+
Sbjct: 179 SLCFDEEIRRKMSDLLIEVYCTQ----FKRDGCYLALDVFPVLANKGMFPSKTTCNILLT 234
Query: 464 GYMNV---ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
+ ++ +A++V KG PD ++ + CK G+ EEA+KL KM + G
Sbjct: 235 SLVRANEFQKCCEAFDVV----CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 521 IVPSTINFRTVFFGLNREGKRDLA 544
+ P+ + F TV GL G+ D A
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEA 314
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 144/300 (48%), Gaps = 10/300 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ I++ + G ++A++ K+++ P Y +I ALC K V+DAL ++
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK--NVNDALNLFT 280
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRA 362
EM N G P+ + + CLC G +A + + +KI V +++S +I A +
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV-VTFSALIDAFVKE 339
Query: 363 GKVEEALALAGEVVGAEKSSLDQ--VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
GK+ EA L E++ K S+D T S+I+ RL++A + M + +
Sbjct: 340 GKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
Y +LI F K K+V + ME+ EM Q G N VT + LI G+ +A VF +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
M G PD TYS+LL LC G+ E A+ + + + P + + G+ + GK
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 4/280 (1%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+N F ++ PS + L+ A+ K K D + + +M N G +
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIA--KMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ C C + A + K+GY + + + ++ C ++ +A++L G++V
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
D T ++IH L R R +A+A +D M +G + + Y ++ K + A+
Sbjct: 183 QP-DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
++++M+Q EP VV + +I N + DA N+F M KG P+ TY+ L+ CL
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
C GR +A +L+ M++ I P+ + F + +EGK
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 152/344 (44%), Gaps = 43/344 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T++I+I + R ++A+ ++ GY P T L+ C G ++ DA+ + G
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC--HGNRISDAVSLVG 175
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+M+ G+ PD T + L EA D + G L +Y +++ LC+ G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 364 KVEEALALAGEVVGAEKSSLDQ--VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
++ AL+L ++ E+ ++ V +II AL + DAL M +GI+ +
Sbjct: 236 DIDLALSLLKKM---EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN-------------- 467
Y SLI + A ++ +M + PNVVT SALI ++
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 468 VERPID---------------------AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
++R ID A ++F M K FP+ TY+ L+ CK R
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+E M+L +M G+V +T+ + T+ G + + D A++V +Q
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 151/333 (45%), Gaps = 6/333 (1%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
YN I + K+ NLF EM T+ +I G + A ++
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
+P+ T+ LI A K K+ +A K+Y EMI PD + + C
Sbjct: 319 ERKINPNVVTFSALIDAFV--KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 331 VLEARKCTD-SLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL-DQVTC 388
+ EA+ + + K + ++Y+ +I+ C+A +V+E + L E+ +++ + + VT
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTY 434
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
++IH + ++A M G+ I Y+ L+ +V A+ + E +Q+
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
S EP++ T + +I G + D W++F + LKG P+ TY+ +++ C+ G EE
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
A L +M + G +P + + T+ R+G +
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 103/187 (55%), Gaps = 1/187 (0%)
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
K+++A+ L G++V + + V ++ A+ + + + ++ + M+ GI ++ Y
Sbjct: 61 KLDDAVNLFGDMVKS-RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+ LI F + Q+ A+ ++ +M + GYEP++VT ++L+ G+ + R DA ++ +M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
G PD T++ L+ L + R+ EA+ L+ +M+ G P + + V GL + G DL
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 544 ARVVLQQ 550
A +L++
Sbjct: 240 ALSLLKK 246
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 177/405 (43%), Gaps = 19/405 (4%)
Query: 135 PHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVE---VLQICN-KYGHN 190
P L TY V+ +C+ + SL++ K+E+ I P V+ + +CN K ++
Sbjct: 219 PDLVTYGIV-VNGLCKRGDIDLALSLLK-KMEQGKIE--PGVVIYNTIIDALCNYKNVND 274
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
LN F+ + + G + +YN I+ + + L +M T++ +I
Sbjct: 275 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+ + G A + E+ P TY LI C ++D+A M+ MI+
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMFELMISKD 391
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKK---IGYTVPLSYSLIIRALCRAGKVEE 367
P+ T + C+ V E + + + +G TV +Y+ +I +A + +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV--TYTTLIHGFFQARECDN 449
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A + ++V ++ D +T ++ L G++E AL + +++ ++ I+ Y +I
Sbjct: 450 AQIVFKQMV-SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
K +V ++ + G +PNVVT + ++ G+ +A +F MK +GP
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV--PSTINFRT 530
PD TY+ L+ + G + +LI +M C V STI T
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVT 613
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 6/342 (1%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNN--YPVTSETWTIMIMLYGRIGLTNMAMNCFKE 268
YN+ I + KD K L+ + ++ YP +T IMI + G + + ++
Sbjct: 222 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYP-NVKTHNIMISGLSKCGRVDDCLKIWER 280
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEV 328
+K + TY LI LC VD A ++ E+ D T LG C
Sbjct: 281 MKQNEREKDLYTYSSLIHGLC--DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC 338
Query: 329 GSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
G + E+ + ++ +SY+++I+ L GK++EA + ++ A+ + D+ T
Sbjct: 339 GKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEA-TMIWRLMPAKGYAADKTTY 397
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
G IH L G + AL + ++ G L ++ Y S+I K+K++ +A +++EM +
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
G E N C+ALI G + R +A M G P +Y++L+ LCK G+ E
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGE 517
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
A + +ML+ G P + + GL R+ K DLA + Q
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 123/552 (22%), Positives = 230/552 (41%), Gaps = 36/552 (6%)
Query: 12 SEAWKIFKSM-EYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+A +FK M E G +P +SY + +A + + + + + +A + ++
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDC 130
+I K EF P+ FS S V D K+ K+D
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYST------------VINDLAKAGKLDD 202
Query: 131 SLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHN 190
+L L SER V + +D ++EK K+A+ + + N HN
Sbjct: 203 ALEL--FDEMSERGVAPDVTCYNILID-GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 191 VL------------NFFSWVR-KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN 237
++ W R KQ + +Y+ I + ++F E+
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 238 NYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVD 297
+ T+ M+ + R G ++ ++ I S + +Y LI L + K+D
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLL--ENGKID 376
Query: 298 DALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLII 356
+A ++ M G+ DK ++ LC G V +A ++ G + + +Y+ II
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 357 RALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
LC+ ++EEA L E+ L+ C ++I L+R RL +A + M + G
Sbjct: 437 DCLCKKKRLEEASNLVKEM-SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID-AW 475
+ T+ Y LI K + G+A ++EM ++G++P++ T S L+ G +R ID A
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR-DRKIDLAL 554
Query: 476 NVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL 535
++++ G D +++L+ LC VG+ ++AM ++ M + + + T+ G
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 536 NREGKRDLARVV 547
+ G + A V+
Sbjct: 615 FKVGDSNRATVI 626
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 211/531 (39%), Gaps = 38/531 (7%)
Query: 7 SRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDE 66
+R + WK +G KP SY+ I +L KA + +D L++ DEM +A
Sbjct: 168 ARGFLDWMWK-------EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220
Query: 67 VFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSE 126
++ +I + +KEK + TA +L +S V+ +K + K
Sbjct: 221 CYNILI-------DGFLKEKDHK--TAMELWDRLLEDS--SVYPNVKTHNIMISGLSKCG 269
Query: 127 KVDCSLVLPHLKTYSERD---------VHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFV 177
+VD L + +ER+ +H +C + S+ E E+ A +
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 178 VEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN 237
+ C + G + W + SYN+ IK + ++ M
Sbjct: 330 TMLGGFC-RCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 238 NYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVD 297
Y T+ I I G N A+ +E+++ G Y +I LC +K +++
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK--RLE 446
Query: 298 DALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLII 356
+A + EM G + + +G L + EA + K G +SY+++I
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 357 RALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
LC+AGK EA A E++ D T ++ L R +++ AL Q G+
Sbjct: 507 CGLCKAGKFGEASAFVKEML-ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV---ERPID 473
+ + ++ LI ++ AM ++ M+ N+VT + L+ G+ V R
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
W Y+M L+ PD +Y+ ++ LC AM+ + GI P+
Sbjct: 626 IWGYMYKMGLQ---PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 176/380 (46%), Gaps = 10/380 (2%)
Query: 172 FTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLF 231
+P+ V+++L+ K F + PGY H+A Y+ ++ + H+ +
Sbjct: 8 LSPKHVLKLLK-SEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV 66
Query: 232 FEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKAD-GYSPSRSTYKYLIIALCG 290
+R + +I YG+ + + A++ FK ++ G P+ +Y L+ A
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL 350
K ++L Y E AG P+ + + C+ +AR D + K G+ +
Sbjct: 127 AKQWVKVESLFAYFE--TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 351 -SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI-IHALLRKGRLEDALAKI 408
SYS +I L +AGK+++AL L E+ +E+ VTC +I I L++ + A+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEM--SERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 409 D-AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
D ++ + + + +I K +V ++I E M+Q+ E ++ T S+LI G +
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
A +VF + + D TY+ +L C+ G+ +E+++L +++++ + ++
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVS 361
Query: 528 FRTVFFGLNREGKRDLARVV 547
+ + GL GK D A ++
Sbjct: 362 YNILIKGLLENGKIDEATMI 381
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 155/350 (44%), Gaps = 6/350 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G ++YN+ IK++ K+F+ R M + + +++ +I + G + A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHV-PDKELIETY 321
+ F E+ G +P + Y LI K K A++++ ++ V P+ +
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT--AMELWDRLLEDSSVYPNVKTHNIM 261
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ L + G V + K + +K+ L +YS +I LC AG V++A ++ E+ K
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL-DERK 320
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+S+D VT +++ R G+++++L M+ + + I Y LI + ++ +A
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEAT 379
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
I M GY + T I G A V ++ G D Y+ ++ CL
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
CK R EEA L+ +M G+ ++ + GL R+ + A L++
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 185/460 (40%), Gaps = 18/460 (3%)
Query: 13 EAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVI 72
E W + +E + P K++ + I L K R +D LK+ + M+ ++ + +I
Sbjct: 240 ELWD--RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 73 TYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGI----KVEEDVRVDQLKSEKV 128
L + G E V K + + + + + G K++E + + ++ K
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYN--TMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 129 DCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYG 188
++V ++ + + E +I ++M W L+ K +A + T + L + N Y
Sbjct: 356 SVNIVSYNILI---KGLLENGKIDEATMIWRLMPAK-GYAADKTTYGIFIHGLCV-NGYV 410
Query: 189 HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI 248
+ L V G+ +Y I K + NL EM ++ + S
Sbjct: 411 NKALGVMQEVESSGGHLDVY-AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I R A +E+ +G P+ +Y LI LC K K +A EM+
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC--KAGKFGEASAFVKEMLE 527
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPLSYSLIIRALCRAGKVEE 367
G PD + L LC + A + + G T + ++++I LC GK+++
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A+ + + + + VT +++ + G A M + G++ I Y +++
Sbjct: 588 AMTVMANM-EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
+ V AME ++ + G P V T + L+R +N
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 83/168 (49%), Gaps = 5/168 (2%)
Query: 391 IIHALLRK---GRLEDALAKI-DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
+ H +LR+ R+ + +++I + ++ Q K V S+I + K +A+++ + M
Sbjct: 45 VYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 447 QQ-SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
++ G EP + + + L+ ++ ++ + ++F + G P+ +TY++L+ CK
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
E+A + M G P ++ TV L + GK D A + + S+
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 153/307 (49%), Gaps = 7/307 (2%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +MI Y + G N A++ + SP TY ++ +LC K+ A+++
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLC--DSGKLKQAMEVLD 228
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
M+ PD + C V A K D ++ G T + +Y++++ +C+ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
+++EA+ ++ + + +T I+ ++ GR DA + M ++G ++ +
Sbjct: 289 RLDEAIKFLNDMP-SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
LI ++ +G+A++I+E+M Q G +PN ++ + L+ G+ ++ A RM
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
+G +PD TY+ +LT LCK G+ E+A++++ ++ G P I + TV GL + GK
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 544 ARVVLQQ 550
A +L +
Sbjct: 468 AIKLLDE 474
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 168/339 (49%), Gaps = 10/339 (2%)
Query: 210 SYNLAIK-IAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKE 268
+YN ++ + SGK + M L ++R+ YP T+TI+I R AM E
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI-TYTILIEATCRDSGVGHAMKLLDE 264
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEV 328
++ G +P TY L+ +C ++GR +D+A+K +M ++G P+ L +C
Sbjct: 265 MRDRGCTPDVVTYNVLVNGIC-KEGR-LDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 329 GSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQ 385
G ++A K + + G++ ++++++I LCR G + A+ + ++ G + +SL
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
++H ++ +++ A+ ++ M +G I Y +++ K+ +V A+EI+ +
Sbjct: 383 ---NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
+ G P ++T + +I G + A + M+ K PD TYS L+ L + G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
+EA+K + GI P+ + F ++ GL + + D A
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/522 (20%), Positives = 212/522 (40%), Gaps = 78/522 (14%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G +A KI + +E G P +Y V I CKA + L VLD M S
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
+ ++ ++ L + G+ Q M ++
Sbjct: 203 DVV---TYNTILRSLCDSGKLK-----QAMEVLDRML----------------------- 231
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
+ DC P + TY+ + CR L+ E ++ + V V
Sbjct: 232 ------QRDC---YPDVITYTIL-IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 181 LQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYP 240
IC + + F G + ++N+ ++ S + L +M R +
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
+ T+ I+I R GL A++ +++ G P+ +Y L+ C K +K+D A+
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC--KEKKMDRAI 399
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALC 360
+ M++ G PD ++Y+ ++ ALC
Sbjct: 400 EYLERMVSRGCYPD----------------------------------IVTYNTMLTALC 425
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
+ GKVE+A+ + ++ ++ S +T ++I L + G+ A+ +D M+ + +K
Sbjct: 426 KDGKVEDAVEILNQL-SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
Y+SL+ +E +V +A++ E ++ G PN VT ++++ G + A +
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
M +G P+ +Y++L+ L G ++EA++L+ ++ + G++
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
+L+ V + + ++R G LE+ ++ M G I T+LI F + + KA +
Sbjct: 99 ALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
I+E ++ SG P+V+T + +I GY +A +V RM + PD TY+ +L LC
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLC 215
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
G+ ++AM+++ +ML P I + + R+ A +L + D
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 185/419 (44%), Gaps = 74/419 (17%)
Query: 203 GYKHTAESYNLAIKIAV-SGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNM 261
G+ SYN + + S ++ N+F EM + T+ I+I + G ++
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+ F +++ G P+ TY LI C K RK+DD K+ M G P+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYC--KLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVP-------------------------------- 349
+ LC G + E + + GY++
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 350 ----LSYSLIIRALCRAGKVEEALALAGE--VVG---------------AEKSSLDQ--- 385
++Y+ +I ++C+AG + A+ + V G ++K +++
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 386 --------------VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
VT ++I+ G++EDA+A ++ MK++G+ + Y++++ F
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFE 491
+ V +A+ + EM + G +P+ +T S+LI+G+ R +A +++ M G PD
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 492 TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK-RDLARVVLQ 549
TY+ L+ C G E+A++L +M++ G++P + + + GLN++ + R+ R++L+
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 160/326 (49%), Gaps = 10/326 (3%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
SYN+ I K + + EM R Y + T+ +I Y + G + A+ E+
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
G +PS TY LI ++C K ++ A++ +M G P++ T + + G
Sbjct: 337 LRHGLTPSVITYTSLIHSMC--KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 330 SVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
+ EA + + G++ + +Y+ +I C GK+E+A+A+ E + + S D V+
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL-EDMKEKGLSPDVVSY 453
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
+++ R +++AL M ++GIK Y+SLI F ++++ +A ++ EEM +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 449 SGYEPNVVTCSALIRGYM---NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
G P+ T +ALI Y ++E+ + N M KG PD TYS+L+ L K R
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHN---EMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTV 531
+ EA +L+ K+ VPS + + T+
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 174/408 (42%), Gaps = 26/408 (6%)
Query: 164 KLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYK--------HTAESYNLAI 215
+L + FTPE +L +L F +W + H + L
Sbjct: 38 QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYK 97
Query: 216 KIAVSGKDF------KHMRNLFFEMRRNNYPV---TSETWTIMIMLYGRIGLTNMAMNCF 266
+ +D +L F+ + Y + TS + +++ Y R+ L + A++
Sbjct: 98 TAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIV 157
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLC 326
+A G+ P +Y ++ A R R + A ++ EM+ + P+ + C
Sbjct: 158 HLAQAHGFMPGVLSYNAVLDATI-RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC 216
Query: 327 EVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVV--GAEKSS 382
G++ A D ++ G +P ++Y+ +I C+ K+++ L + G E
Sbjct: 217 FAGNIDVALTLFDKMETKG-CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP-- 273
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
+ ++ +I+ L R+GR+++ + M ++G L Y +LI + KE +A+ +
Sbjct: 274 -NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
EM + G P+V+T ++LI A +M+++G P+ TY+ L+ +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G EA +++ +M D G PS + + + G GK + A VL+
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 210/489 (42%), Gaps = 12/489 (2%)
Query: 14 AWKIFKSME--YQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWV 71
A +FKS++ Y T + + +K + S + L ++ QA ++ V
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175
Query: 72 I-TYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDC 130
+ + +K + E V + S+++P F+ + + G ++ V +K++
Sbjct: 176 LDATIRSKRNISFAENVFKEMLESQVSPNVFTYN--ILIRGFCFAGNIDVALTLFDKMET 233
Query: 131 SLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHN 190
LP++ TY+ + C++ + L++ K + V + +C +
Sbjct: 234 KGCLPNVVTYNTL-IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
++F + GY +YN IK +F + EM R+ + T+T +I
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+ G N AM +++ G P+ TY L+ +KG +++A ++ EM + G
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF-SQKGY-MNEAYRVLREMNDNG 410
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEAL 369
P + C G + +A + +K+ G + + SYS ++ CR+ V+EAL
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 370 ALAGEVVGAEKS-SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
+ E+V EK D +T S+I + R ++A + M + G+ YT+LI
Sbjct: 471 RVKREMV--EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
+ E + KA+++ EM + G P+VVT S LI G R +A + ++ + P
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 489 DFETYSMLL 497
TY L+
Sbjct: 589 SDVTYHTLI 597
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 150/343 (43%), Gaps = 44/343 (12%)
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
Y T ++ +I YGR GL A++ F +K G P+ TY +I A CG+ G +
Sbjct: 264 YGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQ 322
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK---------------------- 336
K + EM G PD+ + L +C G + EA +
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 337 ---CTDSLKKIGYTV----P--------LSYSLIIRALCRAGKVEEALALAGEV--VGAE 379
C + + + P +SYS +I +AG+ +EAL L GE+ +G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI- 440
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
+LD+V+ +++ + GR E+AL + M GIK + Y +L+ + K+ + +
Sbjct: 441 --ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
++ EM++ PN++T S LI GY +A +F K G D YS L+
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
LCK G A+ LI +M GI P+ + + ++ R D
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 36/304 (11%)
Query: 247 TIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEM 306
+ MI GR G +A F+ A GY + + LI A GR G ++A+ ++ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAY-GRSGLH-EEAISVFNSM 294
Query: 307 INAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVE 366
G P+ ++Y+ +I A + G
Sbjct: 295 KEYGLRPNL----------------------------------VTYNAVIDACGKGGMEF 320
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
+ +A + + D++T S++ R G E A D M + I+ + Y +L
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP 486
+ K Q+ A EI+ +M PNVV+ S +I G+ R +A N+F M+ G
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARV 546
D +Y+ LL+ KVGRSEEA+ ++ +M GI + + + G ++GK D +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 547 VLQQ 550
V +
Sbjct: 501 VFTE 504
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
+++ +I + + G + A+N F E++ G + R +Y L+ ++ + GR ++AL +
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL-SIYTKVGRS-EEALDILR 468
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRA 362
EM + G D LG + G E +K +K+ + +P L+YS +I +
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR-EHVLPNLLTYSTLIDGYSKG 527
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G +EA+ + E A + D V ++I AL + G + A++ ID M ++GI +
Sbjct: 528 GLYKEAMEIFREFKSAGLRA-DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 423 YTSLIVHFFKEKQVGKAME 441
Y S+I F + + ++ +
Sbjct: 587 YNSIIDAFGRSATMDRSAD 605
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 159/343 (46%), Gaps = 4/343 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K A +YN I V +DF + + M+++ T+T+++ L + G + A
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
F E++ G Y LI C RKG + A ++ E+ G P +
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNC-RKG-NMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
+C+VG + A + ++ G + + ++ +I CR G V+EA ++ +V+ +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA-SMIYDVMEQKGF 430
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
D TC +I R R ++A + M + G+KL+ YT+LI + KE V +A
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ EM G +PN +T + +I Y + +A + M+ G PD TY+ L+ C
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
+EAM+L +M G+ +++ + + GL++ GK D A
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 10/320 (3%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
+F M + +T + TI++ R G + KE G P TY +I A
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 290 -GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
R V+ LK+ M G V +K + + G + +A K D +++ G
Sbjct: 271 KQRDFSGVEGVLKV---MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 349 PLS-YSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
+ Y+ +I CR G ++ A L E+ G SS T G++I + + G + A
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY---TYGALIDGVCKVGEMGAAE 384
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
++ M+ +G+ +T V+ +LI + ++ V +A I + M+Q G++ +V TC+ + +
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
++R +A +RM G +Y+ L+ CK G EEA +L +M G+ P+
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 526 INFRTVFFGLNREGKRDLAR 545
I + + + ++GK AR
Sbjct: 505 ITYNVMIYAYCKQGKIKEAR 524
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 136/338 (40%), Gaps = 43/338 (12%)
Query: 198 VRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIG 257
V K+ G + +Y L ++++V LF EMR +T +I R G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 258 LTNMAMNCFKEIKADGYSPSRSTYKYLIIALC--GRKGRKVDDALKMYGEMINAGHVPDK 315
A F E+ G SPS TY LI +C G G +M + +N V
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 316 ELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV--------------------------- 348
LI+ Y C G V EA D +++ G+
Sbjct: 404 TLIDGY----CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 349 ---------PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKG 399
+SY+ +I C+ G VEEA L E+ ++ + +T +I+A ++G
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM-SSKGVQPNAITYNVMIYAYCKQG 518
Query: 400 RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
++++A M+ G+ + YTSLI V +AM + EM G + N VT +
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 460 ALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
+I G + +A+ ++ MK KG D + Y+ L+
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 141/312 (45%), Gaps = 51/312 (16%)
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK-----CT 338
++ + +K R++D L+++ M+++G + + LC G V +++K
Sbjct: 193 IVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSV 252
Query: 339 DSLKKIGYTVPLSYSLIIRALCRA---GKVEEALALAGEVVGAEKSSLDQVTCGSIIHAL 395
+K YT Y+ II A + VE L +V+ + ++VT ++
Sbjct: 253 KGIKPEAYT----YNTIINAYVKQRDFSGVEGVL----KVMKKDGVVYNKVTYTLLMELS 304
Query: 396 LRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNV 455
++ G++ DA D M+++GI+ +HVYTSLI ++ + +A + +E+ + G P+
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 456 VTCSALIRGY--------------------MNVERPI---------------DAWNVFYR 480
T ALI G +N+ + + +A ++
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
M+ KG D T + + +C ++ R +EA + +F+M++ G+ ST+++ + +EG
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 541 RDLARVVLQQKS 552
+ A+ + + S
Sbjct: 485 VEEAKRLFVEMS 496
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 154/387 (39%), Gaps = 28/387 (7%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKA---SRTEDILKVLDEMQ 57
+V G R + ++ K+ K +GIKP +Y I K S E +LKV+
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK--- 286
Query: 58 ASKIAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAP---EKFSESKKQVFVGIKV 114
+D V + +TY E +VK +M A KL E+ ES V+ + +
Sbjct: 287 ------KDGVVYNKVTYTLLM-ELSVKNG--KMSDAEKLFDEMRERGIESDVHVYTSL-I 336
Query: 115 EEDVRVDQLKS-----EKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSA 169
+ R +K +++ + P TY + VC++ L+ E K
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL-IDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 170 IRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRN 229
F + C K + + V +Q G++ + N K + +
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
F M +++ ++T +I +Y + G A F E+ + G P+ TY +I A C
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV- 348
K K+ +A K+ M G PD + + C +V EA + + G
Sbjct: 516 --KQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEV 375
++Y+++I L +AGK +EA L E+
Sbjct: 574 SVTYTVMISGLSKAGKSDEAFGLYDEM 600
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/562 (22%), Positives = 238/562 (42%), Gaps = 42/562 (7%)
Query: 10 HISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFH 69
++ A K+ +SM +G+ P +Y V I LCK R ED +L EM + +++ + +
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 70 WVIT-YLENKGEFAVKEKVQQMHTAS-------------KLAPEKFSESKKQVFVGIKVE 115
+I L+ + A K V +M + ++ E E K +F G+
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA- 375
Query: 116 EDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTP- 174
S ++P + Y+ + CR + + L+ E ++K I +P
Sbjct: 376 ---------------SGLIPQAQAYASL-IEGYCREKNVRQGYELLVE-MKKRNIVISPY 418
Query: 175 EFVVEVLQICNKYGHNVLNFFSWVRKQ--PGYKHTAESYNLAIKIAVSGKDFKHMRNLFF 232
+ V +C+ ++ ++ V++ G + Y IK + F +
Sbjct: 419 TYGTVVKGMCSS--GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
EM+ + +I+ + + A + E+ +G P+ TY I +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI--E 534
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-S 351
+ A K EM G +P+K L + C+ G V+EA S+ G +
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
Y++++ L + KV++A + E+ G + + D + G +I+ + G ++ A + D M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
++G+ + +Y L+ F + ++ KA E+++EM G PN VT +I GY
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+A+ +F MKLKG PD Y+ L+ C++ E A+ IF G ST F +
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT-IFGTNKKGCASSTAPFNAL 772
Query: 532 FFGLNREGKRDLARVVLQQKSD 553
+ + GK +L VL + D
Sbjct: 773 INWVFKFGKTELKTEVLNRLMD 794
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 130/563 (23%), Positives = 229/563 (40%), Gaps = 58/563 (10%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+V G S + A+ I K M G +P YT IK + SR D ++VL EM+
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVG--IKVEEDV 118
IA ++ +I L + L P F+ F+ I+ E
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG---AFISGYIEASEFA 539
Query: 119 RVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVV 178
D+ E +C VLP+ ++L + LI E +K
Sbjct: 540 SADKYVKEMRECG-VLPN-------------KVLCTG----LINEYCKKG---------- 571
Query: 179 EVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN 238
+V++ C+ Y V G A++Y + + +F EMR
Sbjct: 572 KVIEACSAYRSMV---------DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
++ ++I + ++G A + F E+ +G +P+ Y L+ C R G +++
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC-RSG-EIEK 680
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS--YSLII 356
A ++ EM G P+ T + C+ G + EA + D +K G VP S Y+ ++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL-VPDSFVYTTLV 739
Query: 357 RALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLE---DALAKI-DAMK 412
CR VE A+ + G SS ++I+ + + G+ E + L ++ D
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASS--TAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
+ K Y +I + KE + A E+ +MQ + P V+T ++L+ GY + R
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM-----LDCGIVPSTIN 527
+ + VF G PD YS+++ K G + +A+ L+ +M +D G S
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917
Query: 528 FRTVFFGLNREGKRDLARVVLQQ 550
R + G + G+ ++A V++
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMEN 940
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 184/459 (40%), Gaps = 84/459 (18%)
Query: 169 AIRFTPEFVVEVLQICN-KYGHNVLNFFSWVRKQPGYKHTAESYN-LAIKIAVSGKDFKH 226
+I PE V+ VL+ +L+FF+WV Q + +S++ LA+ + G F+
Sbjct: 57 SIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGS-FEK 115
Query: 227 MRNLFFEMRRNNYPVTSETWTIMI-------------MLYGRI-------GLTNMAMNCF 266
++ M N+PV +E W+ ++ +L+G + G A+ F
Sbjct: 116 ALSVVERMIERNWPV-AEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVF 174
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLC 326
P S K L+ AL + ++D +Y M+ V D + + C
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALL--RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHC 232
Query: 327 EVGSVL-----------EARKCT---DSLKKIGYT------VPL--SYSLIIRALCRAGK 364
G+V E R T D K+ + VPL +Y ++I LC+ +
Sbjct: 233 RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKR 292
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALL---------------------------- 396
+E+A +L E + + SLD T +I LL
Sbjct: 293 LEDAKSLLVE-MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 397 -------RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
++G +E A A D M G+ Y SLI + +EK V + E++ EM++
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
+ T +++G + A+N+ M G P+ Y+ L+ + R +A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
M+++ +M + GI P + ++ GL++ + D AR L
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 39/342 (11%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T TIMI Y R A + GY P T+ L+ C +GR V +A+ +
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC-LEGR-VSEAVALVD 164
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY------------------ 346
M+ PD + T + LC G V EA D + + G+
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 347 ------------------TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
+ YS++I +LC+ G ++AL+L E+ + D VT
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTY 283
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
S+I L G+ +D + M + I + +++LI F KE ++ +A E+ EM
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
G P+ +T ++LI G+ +A +F M KG PD TYS+L+ CK R ++
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
M+L ++ G++P+TI + T+ G + GK + A+ + Q+
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 152/325 (46%), Gaps = 13/325 (4%)
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC--G 290
EM++ VT T + L GR+ + A+ + G+ P TY ++ LC G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRV---SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL 350
+D KM I A V +I++ LC+ GS +A + ++ G +
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDS----LCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 351 -SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+YS +I LC GK ++ + E++G D VT ++I +++G+L +A +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP-DVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M +GI Y SLI F KE + +A ++ + M G EP++VT S LI Y +
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
R D +F + KG P+ TY+ L+ C+ G+ A +L +M+ G+ PS + +
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 530 TVFFGLNREGKRDLARVVLQ--QKS 552
+ GL G+ + A + + QKS
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKS 484
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+LF +M N + ++I+I + G + A++ F E++ G TY LI L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 289 C----------------GR-----------------KGRKVDDALKMYGEMINAGHVPDK 315
C GR K K+ +A ++Y EMI G PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 316 ELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGE 374
+ + C+ + EA + D + G + +YS++I + C+A +V++ + L E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 375 VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
+ ++ + +T +++ + G+L A M +G+ ++ Y L+
Sbjct: 411 I-SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
++ KA+EI E+MQ+S + + +I G N + DAW++F + KG PD TY+
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+++ LCK G EA L KM + G P + +
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 135/299 (45%), Gaps = 18/299 (6%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
+++ I + V + L+ EM + T+ +I + + + A F +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
+ G P TY LI + C K ++VDD ++++ E+ + G +P+ T + C+ G
Sbjct: 377 VSKGCEPDIVTYSILINSYC--KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 330 SVLEARKCTDSLKKIGYTVP---LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV 386
+ A++ + G VP ++Y +++ LC G++ +AL + EK ++
Sbjct: 435 KLNAAKELFQEMVSRG--VPPSVVTYGILLDGLCDNGELNKALEIF------EKMQKSRM 486
Query: 387 TCGS-----IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
T G IIH + +++DA + ++ +G+K + Y +I K+ + +A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+ +M++ G P+ T + LIR ++ I + + MK+ G D T M++ L
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 168/392 (42%), Gaps = 12/392 (3%)
Query: 145 VHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYG-HNVLNFFSWVRKQPG 203
++ +C+ +S++ L ++ E++ ++ + + +C + L+ F+ + + G
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-G 275
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
K +Y+ I + + + EM N T++ +I ++ + G A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 264 NCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLG 323
+ E+ G +P TY LI C K + +A +M+ M++ G PD +
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFC--KENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVV--GAE 379
C+ V + + + G +P ++Y+ ++ C++GK+ A L E+V G
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGL-IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
S VT G ++ L G L AL + M++ + L I +Y +I +V A
Sbjct: 453 PSV---VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ + G +P+VVT + +I G +A +F +MK G PD TY++L+
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+++LI +M CG + + V
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMV 601
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 149/350 (42%), Gaps = 14/350 (4%)
Query: 14 AWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVIT 73
A +F+ ME + IK + Y++ I LCK +D L + +EM+ I + +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 74 YLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLV 133
L N G++ K+ + + P+ + S + V +K + + +L +E + +
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFS-ALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 134 LPHLKTYS---ERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICN-KYGH 189
P TY+ + E C ++ M ++ + E + ++ + + C K
Sbjct: 348 -PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS----ILINSYCKAKRVD 402
Query: 190 NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIM 249
+ + F + + +T L + SGK + LF EM P + T+ I+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGK-LNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 250 IMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA 309
+ G N A+ F++++ + Y +I +C KVDDA ++ + +
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC--NASKVDDAWSLFCSLSDK 519
Query: 310 GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRA 358
G PD +G LC+ GS+ EA +K+ G T +Y+++IRA
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+ A+ R + + L M+ GI+ ++ T +I + ++K++ A ++ + G
Sbjct: 76 LCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
YEP+ +T S L+ G+ R +A + RM PD T S L+ LC GR EA+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
LI +M++ G P + + V L + G LA
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 5/198 (2%)
Query: 349 PLSYSLIIRALCRAGKVEEALAL--AGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
P+ ++ + A+ R + + L E+ G E D T +I+ RK +L A +
Sbjct: 70 PIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEH---DMYTMTIMINCYCRKKKLLFAFS 126
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
+ + G + +++L+ F E +V +A+ +++ M + P++VT S LI G
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
R +A + RM G PD TY +L LCK G S A+ L KM + I S +
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 527 NFRTVFFGLNREGKRDLA 544
+ V L ++G D A
Sbjct: 247 QYSIVIDSLCKDGSFDDA 264
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 6/273 (2%)
Query: 281 YKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDS 340
Y + I+ C +V AL + G+M+ G+ PD+ I + + C V +A D
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 341 LKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLR 397
+ +IGY + +Y+ II +LC+ +V +A E+ E+ + + VT ++++ L
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCN 237
Query: 398 KGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT 457
R DA + M ++ I + Y++L+ F K +V +A E+ EEM + +P++VT
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 458 CSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML 517
S+LI G +R +A +F M KG D +Y+ L+ CK R E+ MKL +M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 518 DCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G+V +T+ + T+ G + G D A+ Q
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 125/269 (46%), Gaps = 4/269 (1%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
GY P Y +I +LC K ++V+DA + E+ G P+ + LC
Sbjct: 185 GYKPDIVAYNAIIDSLC--KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 333 EA-RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
+A R +D +KK ++YS ++ A + GKV EA L E+V D VT S+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP-DIVTYSSL 301
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
I+ L R+++A D M +G + Y +LI F K K+V M++ EM Q G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
N VT + LI+G+ A F +M G PD TY++LL LC G E+A+
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 512 LIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+ M + + + TV G+ + GK
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 4/281 (1%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
N A + FKEI+ G P+ TY L+ LC + DA ++ +MI P+
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLC--NSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
L + G VLEA++ + + ++ + +YS +I LC +++EA + +V +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV-S 323
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
+ D V+ ++I+ + R+ED + M Q+G+ Y +LI FF+ V K
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A E +M G P++ T + L+ G + A +F M+ + D TY+ ++
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+CK G+ EEA L + G+ P + + T+ GL +G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 123/244 (50%), Gaps = 6/244 (2%)
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYS 353
K++DA+ ++ +M+ + P L + ++ ++ +G L +++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 354 LIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
++I C +V AL++ G+++ G E D+VT GS+++ R+ R+ DA++ +D M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEP---DRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+ G K I Y ++I K K+V A + +E+++ G PNVVT +AL+ G N R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
DA + M K P+ TYS LL K G+ EA +L +M+ I P + + ++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 532 FFGL 535
GL
Sbjct: 302 INGL 305
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 228 RNLFFEMRRNNYPVTSETWTIMI---MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYL 284
+ LF EM R + T++ +I L+ RI N F + + G +Y L
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM---FDLMVSKGCLADVVSYNTL 336
Query: 285 IIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI 344
I C K ++V+D +K++ EM G V + T + + G V +A++ +
Sbjct: 337 INGFC--KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 345 GYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLED 403
G + + +Y++++ LC G++E+AL + E + + LD VT ++I + + G++E+
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIF-EDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
A + ++ +G+K I YT+++ + + + + +M+Q G N T S
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 144/374 (38%), Gaps = 45/374 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+V G RN +S+A + M G KP +Y I LCK R D E++
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK-KQVFVGIKVEEDVR 119
I + ++ L N ++ ++ K+ P + S FV K + +
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV--KNGKVLE 278
Query: 120 VDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVE 179
+L E V S + P + TYS ++ +C + ++++++ F + +V
Sbjct: 279 AKELFEEMVRMS-IDPDIVTYSSL-INGLC-----------LHDRIDEANQMF--DLMV- 322
Query: 180 VLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNY 239
G SYN I K + LF EM +
Sbjct: 323 ---------------------SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 240 PVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDA 299
+ T+ +I + + G + A F ++ G SP TY L+ LC +++ A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG--ELEKA 419
Query: 300 LKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK--CTDSLKKIGYTVPLSYSLIIR 357
L ++ +M D T + +C+ G V EA C+ SLK + + ++Y+ ++
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI-VTYTTMMS 478
Query: 358 ALCRAGKVEEALAL 371
LC G + E AL
Sbjct: 479 GLCTKGLLHEVEAL 492
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 165/352 (46%), Gaps = 4/352 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G+ Y I + + ++LFFEM + T+T++I + G+
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+++++ DG P+ TY ++ LC K + DA +++ EM G + T +
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLC--KDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
G LC + EA K D +K G L +Y+ +I C GK+ +AL+L ++ +
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL-KSRGL 369
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
S VT ++ RKG A + M+++GIK + YT LI F + + KA++
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ M++ G P+V T S LI G+ + +A +F M K P+ Y+ ++ C
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
K G S A+KL+ +M + + P+ ++R + L +E K A ++++ D
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 173/383 (45%), Gaps = 64/383 (16%)
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN-------------NYPVTSET----- 245
++HT ES ++ +++ +SG F H ++L ++ +Y SET
Sbjct: 35 FQHTHESISILLRLLLSGNLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKF 94
Query: 246 --WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGR------------ 291
+ ++I Y + N++++ F E+ +G+ P + + YL+ + G
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 292 --------------------KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
+ +++ + + E+ G P+ + T + C+ G +
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 332 LEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV---- 386
+A+ + K+G +Y+++I L + G ++ + EK D V
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM------YEKMQEDGVFPNL 268
Query: 387 -TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
T +++ L + GR +DA D M+++G+ I Y +LI +E ++ +A +++++
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M+ G PN++T + LI G+ V + A ++ +K +G P TY++L++ C+ G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 506 SEEAMKLIFKMLDCGIVPSTINF 528
+ A K++ +M + GI PS + +
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTY 411
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 158/345 (45%), Gaps = 9/345 (2%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG--RIGLTN 260
G+ + +N + V F + F E N V + ++ I++ G G
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE---NKSKVVLDVYSFGILIKGCCEAGEIE 180
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
+ + E+ G+SP+ Y LI C +KG +++ A ++ EM G V ++
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCC-KKG-EIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAE 379
+ L + G + + + +++ G L +Y+ ++ LC+ G+ ++A + E+
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RER 297
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
S + VT ++I L R+ +L +A +D MK GI + Y +LI F ++GKA
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ + +++ G P++VT + L+ G+ A + M+ +G P TY++L+
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
+ E+A++L M + G+VP + + G +G+ + A
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 10/345 (2%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
S+ + IK + + +L E+ + +T +I + G A + F E+
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
G + TY LI L +K +MY +M G P+ + LC+ G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKK--QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG 282
Query: 330 SVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKS---SLDQ 385
+A + D +++ G + + +Y+ +I LCR K+ EA +VV KS + +
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA----NKVVDQMKSDGINPNL 338
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
+T ++I G+L AL+ +K +G+ ++ Y L+ F ++ A ++++E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M++ G +P+ VT + LI + + A + M+ G PD TYS+L+ C G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
EA +L M++ P+ + + T+ G +EG A +L++
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 43/319 (13%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
+YN + K +F EMR T+ +I R N A ++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
K+DG +P+ TY LI CG K+ AL + ++ + G P + C G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVG--KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 330 SVLEARKCTDSLKKIGY-TVPLSYSLIIRALCRAGKVEEA--LALAGEVVGAEKSSLDQV 386
A K +++ G ++Y+++I R+ +E+A L L+ E +G D
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP---DVH 444
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
T +IH KG++ +A +M ++ + +Y ++I+ + KE +A+++++EM
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
++ PNV +Y ++ LCK +S
Sbjct: 505 EEKELAPNVA-----------------------------------SYRYMIEVLCKERKS 529
Query: 507 EEAMKLIFKMLDCGIVPST 525
+EA +L+ KM+D GI PST
Sbjct: 530 KEAERLVEKMIDSGIDPST 548
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
LD + G +I G +E + + + + G + +YT+LI K+ ++ KA ++
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
EM + G N T + LI G + ++ +M+ G FP+ TY+ ++ LCK
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA-RVVLQQKSDLIR 556
GR+++A ++ +M + G+ + + + T+ GL RE K + A +VV Q KSD I
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 4/221 (1%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +I + +G A++ +++K+ G SPS TY L+ C RKG A KM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC-RKG-DTSGAAKMVK 397
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
EM G P K + ++ +A + S++++G + +YS++I C G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
++ EA L +V + ++V ++I ++G AL + M+++ + + Y
Sbjct: 458 QMNEASRLFKSMV-EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
+I KE++ +A ++E+M SG +P+ S + R
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 14/348 (4%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
Q Y + YN+ I++ R LFFEM++ + +ET+ +I +GR G
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 63
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
AMN ++ +PSRSTY LI A CG G +AL++ +M + G PD + T
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINA-CGSSG-NWREALEVCKKMTDNGVGPD---LVT 118
Query: 321 YLGCLCEVGSVLEARKCTD--SLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVV 376
+ L S + K L K P ++++II L + G+ +AL L +
Sbjct: 119 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM- 177
Query: 377 GAEKSS---LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
EK + D VT SI+H KG +E+ A +AM +G+K I Y +L+ +
Sbjct: 178 -REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
G A+ ++ +++Q+G P+VV+ + L+ Y +P A VF M+ + P+ TY
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
+ L+ G EA+++ +M GI P+ ++ T+ +R K+
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 237/564 (42%), Gaps = 43/564 (7%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
M+ H N + +A +F M+ KP ++Y I +A + + ++D+M +
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
IA ++ +I + G + +V + T + + P+ + + V K
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNI--VLSAYKSGRQYSK 134
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
E + + V P T++ ++ + ++ SS L EK A P+ VV
Sbjct: 135 ALSYFELMKGAKVRPDTTTFN-IIIYCLSKLGQSSQALDLFNSMREKRA-ECRPD-VVTF 191
Query: 181 LQICNKYG-----HNVLNFFSWVRKQPGYKHTAESYN-LAIKIAVSGKDFKHMRNLFFEM 234
I + Y N F + + G K SYN L AV G + ++ ++
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALMGAYAVHGMSGTAL-SVLGDI 249
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
++N ++T ++ YGR A F ++ + P+ TY LI A G G
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY-GSNGF 308
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS--- 351
+ +A++++ +M G P+ + V ++L A C+ S KK+ LS
Sbjct: 309 -LAEAVEIFRQMEQDGIKPN----------VVSVCTLLAA--CSRSKKKVNVDTVLSAAQ 355
Query: 352 ----------YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
Y+ I + A ++E+A+AL + + +K D VT +I R +
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALY-QSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
+A++ + M+ I LT VY+S++ + K+ QV +A I +M+ +G EP+V+ +++
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
+ Y E+ A +F M+ G PD S L+ K G+ L+ M + I
Sbjct: 475 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Query: 522 VPSTINFRTVFFGLN--REGKRDL 543
+ F +F N +E KR +
Sbjct: 535 PFTGAVFFEIFSACNTLQEWKRAI 558
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 158/379 (41%), Gaps = 26/379 (6%)
Query: 179 EVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN 238
E L++C K N G ++N+ + SG+ + + F M+
Sbjct: 99 EALEVCKKMTDN------------GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS--PSRSTYKYLIIALCGRKGRKV 296
+ T+ I+I ++G ++ A++ F ++ P T+ I+ L KG ++
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS-IMHLYSVKG-EI 204
Query: 297 DDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSL 354
++ ++ M+ G P+ +G G A +K+ G +P +SY+
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG-IIPDVVSYTC 263
Query: 355 IIRALCRA---GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
++ + R+ GK +E + + E+ + VT ++I A G L +A+ M
Sbjct: 264 LLNSYGRSRQPGKAKEVFLM----MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+Q GIK + +L+ + K+ ++ Q G N ++ I Y+N
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
A ++ M+ K D T+++L++ C++ + EA+ + +M D I + + +V
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Query: 532 FFGLNREGKRDLARVVLQQ 550
+++G+ A + Q
Sbjct: 440 LCAYSKQGQVTEAESIFNQ 458
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 109/578 (18%), Positives = 226/578 (39%), Gaps = 80/578 (13%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+++ + S S+A F+ M+ ++P ++ + I L K ++ L + + M+ +
Sbjct: 122 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 61 IAIRDEV--FHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK--------KQVFV 110
R +V F ++ KGE V + A L P S +
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 241
Query: 111 GIKVEEDVRVDQLKSEKVDCSLVL-------------------------PHLKTYSER-D 144
+ V D++ + + + V + +L P++ TY+ D
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 301
Query: 145 VHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH--NVLNFFSWVRKQP 202
+ L+ +++ I ++E+ I+ V +L C++ NV S + +
Sbjct: 302 AYGSNGFLAEAVE---IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR- 357
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G +YN AI ++ + + L+ MR+ S T+TI+I R+ A
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
++ KE++ ++ Y ++ A K +V +A ++ +M AG PD
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAY--SKQGQVTEAESIFNQMKMAGCEPD-------- 467
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSS 382
+ S+L A ++ + GK E L L E G E
Sbjct: 468 --VIAYTSMLHAYNASE---------------------KWGKACE-LFLEMEANGIEP-- 501
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
D + C +++ A + G+ + +D M+++ I T V+ + ++ +A+++
Sbjct: 502 -DSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 560
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
I+ M ++ + ++ + + +FY++ G + +TY++LL L
Sbjct: 561 IQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLA 620
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVF-FGLNREG 539
VG + ++++ M GI PS +R + FG G
Sbjct: 621 VGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAG 658
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 217/528 (41%), Gaps = 56/528 (10%)
Query: 21 MEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYLENKGE 80
M GIKP ++ V IK LC+A + + +L++M + + ++ F V+ +G+
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 81 FAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTY 140
++++ +F S V V + V
Sbjct: 240 LDGALRIREQMV-------EFGCSWSNVSVNVIV-------------------------- 266
Query: 141 SERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPE---FVVEVLQICNKYGH--NVLNFF 195
H C+ + IQE + F P+ F V +C K GH + +
Sbjct: 267 -----HGFCKEGRVEDALNFIQEMSNQDG--FFPDQYTFNTLVNGLC-KAGHVKHAIEIM 318
Query: 196 SWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGR 255
V Q GY +YN I + K + +M + + T+ +I +
Sbjct: 319 D-VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 256 IGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDK 315
A + + + G P T+ LI LC + +V A++++ EM + G PD+
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSKGCEPDE 435
Query: 316 ELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGE 374
+ LC G + EA ++ G ++Y+ +I C+A K EA + E
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 375 --VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
V G ++S VT ++I L + R+EDA +D M +G K + Y SL+ HF +
Sbjct: 496 MEVHGVSRNS---VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
+ KA +I++ M +G EP++VT LI G R A + +++KG
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCG-IVPSTINFRTVFFGLNREG 539
Y+ ++ L + ++ EA+ L +ML+ P +++R VF GL G
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 38/324 (11%)
Query: 262 AMNCFKEI-KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
A+N +E+ DG+ P + T+ L+ LC K V A+++ M+ G+ PD +
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLC--KAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 321 YLGCLCEVGSVLEARKCTDSL-KKIGYTVPLSYSLIIRALCRAGKVEEALALAG------ 373
+ LC++G V EA + D + + ++Y+ +I LC+ +VEEA LA
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 374 ----------------------------EVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
E + ++ D+ T +I +L KG+L++AL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+ M+ G ++ Y +LI F K + +A EI +EM+ G N VT + LI G
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
R DA + +M ++G PD TY+ LLT C+ G ++A ++ M G P
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 526 INFRTVFFGLNREGKRDLARVVLQ 549
+ + T+ GL + G+ ++A +L+
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLR 599
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 174/397 (43%), Gaps = 41/397 (10%)
Query: 192 LNFFSWVRKQPGYKHTAESYN-LAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
L F+ K+P + Y + +++ SG F M+ + +M+ + + + T+ I+I
Sbjct: 67 LRLFNLASKKPNFSPEPALYEEILLRLGRSGS-FDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 251 MLYGRIGLTNMAM-------------------NCFKEIKADGYS---------------- 275
Y + L + + N + DG S
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 276 -PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEA 334
P ST+ LI ALC + ++ A+ M +M + G VPD++ T + E G + A
Sbjct: 186 KPDVSTFNVLIKALC--RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 335 RKCTDSLKKIGYT-VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH 393
+ + + + G + +S ++I+ C+ G+VE+AL E+ + DQ T ++++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
L + G ++ A+ +D M Q+G ++ Y S+I K +V +A+E++++M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
N VT + LI + +A + + KG PD T++ L+ LC AM+L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 514 FKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+M G P + + L +GK D A +L+Q
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 214/523 (40%), Gaps = 57/523 (10%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G++ + A +I + M G + S V + CK R ED L + EM
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 61 IAIRDE-VFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGI----KVE 115
D+ F+ ++ L G VK ++ M + + + V G+ +V+
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGH--VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 116 EDVRV-DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTP 174
E V V DQ+ + DCS P+ TY+ + +C+ L + K +
Sbjct: 348 EAVEVLDQMITR--DCS---PNTVTYNTL-ISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 175 EFVVEVLQICNKYGHNV-LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFE 233
F + +C H V + F +R + G + +YN+ I S N+ +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 234 MRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
M + + T+ +I + + T A F E++ G S + TY LI LC K
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC--KS 518
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SY 352
R+V+DA ++ +MI G PDK + L C G + +A ++ G + +Y
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
+I LC+AG+VE + LLR +++
Sbjct: 579 GTLISGLCKAGRVE------------------------VASKLLR------------SIQ 602
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM-QQSGYEPNVVTCSALIRGYMNVERP 471
+GI LT H Y +I F++++ +A+ + EM +Q+ P+ V+ + RG N P
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 472 I-DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
I +A + + KG P+F + ML L + E +KL+
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLV 705
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 5/350 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K ++N+ IK + + +M +T+T ++ Y G + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA-GHVPDKELIETY 321
+ +++ G S S + ++ C ++GR V+DAL EM N G PD+ T
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFC-KEGR-VEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ LC+ G V A + D + + GY + +Y+ +I LC+ G+V+EA+ + +++
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-TRD 360
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
S + VT ++I L ++ ++E+A + +GI + + SLI + AM
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
E+ EEM+ G EP+ T + LI + + +A N+ +M+L G TY+ L+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
CK ++ EA ++ +M G+ +++ + T+ GL + + + A ++ Q
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 164/369 (44%), Gaps = 12/369 (3%)
Query: 190 NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIM 249
+ LNF + Q G+ ++N + KH + M + Y T+ +
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 250 IMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA 309
I ++G A+ ++ SP+ TY LI LC K +V++A ++ + +
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC--KENQVEEATELARVLTSK 394
Query: 310 GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEA 368
G +PD + + LC + A + + ++ G +Y+++I +LC GK++EA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 369 LALAG--EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
L + E+ G +S +T ++I + + +A D M+ G+ Y +L
Sbjct: 455 LNMLKQMELSGCARSV---ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP 486
I K ++V A +++++M G +P+ T ++L+ + A ++ M G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR----D 542
PD TY L++ LCK GR E A KL+ + GI + + V GL R+ K +
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 543 LARVVLQQK 551
L R +L+Q
Sbjct: 632 LFREMLEQN 640
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 134/270 (49%), Gaps = 8/270 (2%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+ F +I G+ P+ TY LI LC K R ++ A++++ +M G P+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLC--KNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 322 LGCLCEVGSVLEAR-KCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ LCE+G +A D +K+ ++++ +I A + GK+ EA L ++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
D T GS+I+ L G L++A M++ G +YT+LI F K K+V M
Sbjct: 290 YP-DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+I EM Q G N +T + LI+GY V RP A VF +M + PD TY++LL L
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 501 CKVGRSEEAMKLIFKM----LDCGIVPSTI 526
C G+ E+A+ + M +D IV TI
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 11/360 (3%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLY 253
F W+R SY ++ + F +LF M + + +T ++ +
Sbjct: 41 FCFWIR-------AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVI 93
Query: 254 GRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVP 313
++ ++ ++ F++++ G P T ++ +C + A G+M+ G P
Sbjct: 94 AKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC--LSSQPCRASCFLGKMMKLGFEP 151
Query: 314 DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALA 372
D + L C + +A D + +G+ + +Y+ +IR LC+ + A+ L
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 373 GEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
++ G S + VT +++ L GR DA + M ++ I+ + +T+LI F K
Sbjct: 212 NQM-GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
++ +A E+ M Q P+V T +LI G +A +FY M+ G +P+
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKS 552
Y+ L+ CK R E+ MK+ ++M G+V +TI + + G G+ D+A+ V Q S
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G+ P T+ L+ C +++DA+ ++ +++ G P+ T + CLC+ +
Sbjct: 148 GFEPDLVTFTSLLNGYC--HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 333 EARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGS 390
A + + + G + P ++Y+ ++ LC G+ +A L +++ + + +T +
Sbjct: 206 HAVELFNQMGTNG-SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM-KRRIEPNVITFTA 263
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I A ++ G+L +A + M Q + + Y SLI + +A ++ M+++G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
PN V + LI G+ +R D +FY M KG + TY++L+ C VGR + A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
++ +M P + + GL GK + A ++ +
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 174/400 (43%), Gaps = 16/400 (4%)
Query: 132 LVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH-- 189
L +P L +H VC + S S K+ K + F P+ +V + N Y H
Sbjct: 112 LGIPPLLCTCNIVMHCVC-LSSQPCRASCFLGKMMK--LGFEPD-LVTFTSLLNGYCHWN 167
Query: 190 ---NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETW 246
+ + F + G+K +Y I+ + H LF +M N T+
Sbjct: 168 RIEDAIALFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 247 TIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEM 306
++ IG A +++ P+ T+ LI A K K+ +A ++Y M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV--KVGKLMEAKELYNVM 284
Query: 307 INAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKV 365
I PD + + LC G + EAR+ +++ G Y + Y+ +I C++ +V
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 366 EEALALAGEVVGAEKSSL-DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
E+ + + E+ ++K + + +T +I GR + A + M + I Y
Sbjct: 345 EDGMKIFYEM--SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
L+ +V KA+ I E M++ + N+VT + +I+G + + DA+++F + K
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
G P+ TY+ +++ C+ G EA L KM + G +P+
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 126/314 (40%), Gaps = 17/314 (5%)
Query: 10 HISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFH 69
H++ A ++F M G +P +Y + LC+ R D +L +M +I F
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 70 WVITYLENKGEFAVKEKVQQMHTASKLAPEKFS-ESKKQVFVGIKVEEDVRVDQLKSEKV 128
+I G+ +++ + + P+ F+ S + ++ R E+
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 129 DCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQIC---- 184
C P+ Y+ +H C+ + E +K + T + V + C
Sbjct: 323 GC---YPNEVIYTTL-IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 185 NKYGHNVLNFFSWVRKQPGYKHTAESYNLAIK-IAVSGKDFKHMRNLFFEMRRNNYPVTS 243
V N S R P + +YN+ + + +GK K + +F MR+ +
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIR----TYNVLLDGLCCNGKVEKALM-IFEYMRKREMDINI 433
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T+TI+I ++G A + F + + G P+ TY +I C R+G + +A ++
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC-RRGL-IHEADSLF 491
Query: 304 GEMINAGHVPDKEL 317
+M G +P++ +
Sbjct: 492 KKMKEDGFLPNESV 505
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 155/329 (47%), Gaps = 7/329 (2%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
GY H S+ + VS FK +L M+ N V+ + + YGR+ +
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+ F ++K PS+ Y ++ L + +++ A K Y M G P + +
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILV--EENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 323 GCLC-EVGSVLEARKCTDSLKKIGYTVPLSYS--LIIRALCRAGKVEEALALAGEVVGAE 379
LC G+V K + K G P SY+ +I LCR G+++EA L E+V +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCD-PDSYTYGTLISGLCRFGRIDEAKKLFTEMV-EK 221
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
+ VT S+I+ L +++A+ ++ MK +GI+ + Y+SL+ K+ + +A
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA 281
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
ME+ E M G PN+VT + LI G ++ +A + RM L+G PD Y +++
Sbjct: 282 MELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
C + + EA + +M+ GI P+ + +
Sbjct: 342 FCAISKFREAANFLDEMILGGITPNRLTW 370
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 165/358 (46%), Gaps = 17/358 (4%)
Query: 180 VLQICNKYG--HNVLNFFSWVRKQPGYK--HTAESYNLAIKIAVSGKDFKHMRNLFFEMR 235
+L IC YG H + K + + ++Y + I V + MR
Sbjct: 89 LLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR 148
Query: 236 RNNYPVTSETWTIMIMLYGR-IGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
P T + ++I R G + + F E+ G P TY LI LC R GR
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC-RFGR 207
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYS 353
+D+A K++ EM+ P + + LC +V EA + + +K G + +YS
Sbjct: 208 -IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
++ LC+ G+ +A+ L E++ A + VT ++I L ++ ++++A+ +D M
Sbjct: 267 SLMDGLCKDGRSLQAMELF-EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN-------VVTCSALIRGYM 466
QG+K +Y +I F + +A ++EM G PN V T + ++RG +
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG-L 384
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
P A+ ++ M+ +G + ET L+ CLCK G ++A++L+ +++ G +PS
Sbjct: 385 CANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPS 442
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 44/305 (14%)
Query: 200 KQPGYKHTAESYNLAIK-IAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGL 258
++ G T S N+ IK + + +F EM + S T+ +I R G
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 259 TNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI 318
+ A F E+ +P+ TY LI LCG K VD+A++ EM + G P+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK--NVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEAL-------- 369
+ + LC+ G L+A + + + G + +Y+ +I LC+ K++EA+
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 370 -------ALAGEVVGA---------EKSSLDQVTCGSI--------IHALLRKGRLEDAL 405
L G+V+ + LD++ G I IH +
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC 385
Query: 406 AKIDA--------MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT 457
A + M+ +GI + + SL+ K+ + KA+++++E+ G P+ T
Sbjct: 386 ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGT 445
Query: 458 CSALI 462
LI
Sbjct: 446 WKLLI 450
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 205/480 (42%), Gaps = 54/480 (11%)
Query: 113 KVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDV------HEVCRILSSSMDWSLIQEKLE 166
K DV V + + CS V P L+ E + H + ILS +W L+
Sbjct: 26 KFSTDVTVPSPVTRRQFCS-VSPLLRNLPEEESDSMSVPHRLLSILSKP-NWH-KSPSLK 82
Query: 167 KSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYN-------------- 212
+P V + + + LNF W+ + P YKH+ SY
Sbjct: 83 SMVSAISPSHVSSLFSL-DLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGV 141
Query: 213 ------LAIKIAVSGKDFKHMRNLFFEMRRNN-----YPVTSETWTIMIMLYGRIGLTNM 261
L IK S D ++ +L +M ++ Y + + ++ R GL +
Sbjct: 142 VFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDE 201
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
+ E+ D P+ TY ++ C K V++A + +++ AG PD +
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYC--KLGNVEEANQYVSKIVEAGLDPDFFTYTSL 259
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL--------SYSLIIRALCRAGKVEEALALAG 373
+ C+ RK DS K+ +PL +Y+ +I LC A +++EA+ L
Sbjct: 260 IMGYCQ-------RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFV 312
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
++ E + T +I +L R +AL + M++ GIK IH YT LI +
Sbjct: 313 KMKDDECFPTVR-TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
+ KA E++ +M + G PNV+T +ALI GY DA +V M+ + P+ TY
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
+ L+ CK +AM ++ KML+ ++P + + ++ G R G D A +L +D
Sbjct: 432 NELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 158/331 (47%), Gaps = 21/331 (6%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+LF +M+ + T T+T++I + A+N KE++ G P+ TY LI +L
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV---------LEARKCTD 339
C + K + A ++ G+M+ G +P+ + C+ G + +E+RK +
Sbjct: 369 CSQC--KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 340 SLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKG 399
+ + +Y+ +I+ C++ V +A+ + +++ K D VT S+I R G
Sbjct: 427 NTR--------TYNELIKGYCKSN-VHKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSG 476
Query: 400 RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
+ A + M +G+ YTS+I K K+V +A ++ + ++Q G PNVV +
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 460 ALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDC 519
ALI GY + +A + +M K P+ T++ L+ LC G+ +EA L KM+
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 520 GIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G+ P+ + L ++G D A QQ
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 127/576 (22%), Positives = 237/576 (41%), Gaps = 75/576 (13%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G+ R + A+K+F M +G + +YT I LC A R ++ + + +M+
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK--- 315
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
DE F V TY + + S+ E + K+ GIK
Sbjct: 316 ---DDECFPTVRTY----------TVLIKSLCGSERKSEALNLVKEMEETGIK------- 355
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
P++ TY+ + +C L+ + LEK + + +
Sbjct: 356 --------------PNIHTYTVL-IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 181 LQICNKY----GHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRR 236
C + +V+ + P + +YN IK K M L + R
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTR----TYNELIKGYCKSNVHKAMGVLNKMLER 456
Query: 237 NNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKV 296
P T+ +I R G + A + G P + TY +I +LC K ++V
Sbjct: 457 KVLPDVV-TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC--KSKRV 513
Query: 297 DDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDS-LKKIGYTVPLSYSLI 355
++A ++ + G P+ + + C+ G V EA + L K L+++ +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 356 IRALCRAGKVEEALALAGEVV--GAEKS-SLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
I LC GK++EA L ++V G + + S D + +IH LL+ G + A ++ M
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI----LIHRLLKDGDFDHAYSRFQQML 629
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
G K H YT+ I + +E ++ A +++ +M+++G P++ T S+LI+GY ++ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLC--KVGRS----------------EEAMKLIF 514
A++V RM+ G P T+ L+ L K G+ + ++L+
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 515 KMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
KM++ + P+ ++ + G+ G +A V
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 215/532 (40%), Gaps = 43/532 (8%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
MV G+ ++ EA + + G+ P + +YT I C+ + KV +EM K
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL-K 282
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
R+EV + H L + + +FV +K +E
Sbjct: 283 GCRRNEVAY--------------------THLIHGLCVARRIDEAMDLFVKMKDDE---- 318
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
P ++TY+ + +C S +L++E E + V +
Sbjct: 319 ------------CFPTVRTYTVL-IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 181 LQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYP 240
+C++ + G +YN I + ++ M
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
+ T+ +I Y + + + AM ++ P TY LI C R G D A
Sbjct: 426 PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQC-RSGN-FDSAY 482
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRAL 359
++ M + G VPD+ + + LC+ V EA DSL++ G + Y+ +I
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 360 CRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
C+AGKV+EA L E + ++ + +T ++IH L G+L++A + M + G++ T
Sbjct: 543 CKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
+ T LI K+ A ++M SG +P+ T + I+ Y R +DA ++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+M+ G PD TYS L+ +G++ A ++ +M D G PS F ++
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 161/382 (42%), Gaps = 38/382 (9%)
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
YK YN + M+ ++ EM + T+ M+ Y ++G A
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 264 NCFKEIKADGYSPSRSTYKYLIIALCGRK------------------------------- 292
+I G P TY LI+ C RK
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 293 --GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL 350
R++D+A+ ++ +M + P + LC EA +++ G +
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 351 -SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-TCGSIIHALLRKGRLEDALAKI 408
+Y+++I +LC K E+A L G+++ EK + V T ++I+ ++G +EDA+ +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQML--EKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
+ M+ + + Y LI + K V KAM ++ +M + P+VVT ++LI G
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
A+ + M +G PD TY+ ++ LCK R EEA L + G+ P+ + +
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 529 RTVFFGLNREGKRDLARVVLQQ 550
+ G + GK D A ++L++
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEK 557
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 128/617 (20%), Positives = 233/617 (37%), Gaps = 121/617 (19%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G I EA +F M+ PT ++YTV IK LC + R + L ++ EM+ +
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGI----KVEE 116
I + +I L ++ +F ++ L P + + + G +E+
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN--ALINGYCKRGMIED 411
Query: 117 DVRVDQL-KSEKVDCSLVLPHLKTYSE-------RDVHEVCRILSSSMDWSLIQEKLEKS 168
V V +L +S K+ P+ +TY+E +VH+ +L+ ++ ++
Sbjct: 412 AVDVVELMESRKLS-----PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVL------- 459
Query: 169 AIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMR 228
P+ V +YN I +F
Sbjct: 460 -----PDVV--------------------------------TYNSLIDGQCRSGNFDSAY 482
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
L M T+T MI + A + F ++ G +P+ Y LI
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
C K KVD+A M +M++ +P+ + LC G + EA + + KIG
Sbjct: 543 C--KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 349 PLSY-SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
+S +++I L + G + A + +++ + + D T + I R+GRL DA
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP-------------- 453
+ M++ G+ + Y+SLI + Q A ++++ M+ +G EP
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 454 ---------------------------------------NVVTCSALIRGYMNVERPIDA 474
N + LI G V A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 475 WNVFYRM-KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
VF M + +G P ++ LL+C CK+ + EA K++ M+ G +P + + +
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 534 GLNREGKRDLARVVLQQ 550
GL ++G+++ V Q
Sbjct: 840 GLYKKGEKERGTSVFQN 856
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 106/519 (20%), Positives = 207/519 (39%), Gaps = 62/519 (11%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G+ R I +A + + ME + + P ++Y IK CK S + VL++M K
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERK 457
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK--KQVFVGIKVEEDV 118
+ ++ +I G F ++ + L P++++ + + +VEE
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 119 RV-DQLKSEKVDCSLV------------------------------LPHLKTYSERDVHE 147
+ D L+ + V+ ++V LP+ T++ +H
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL-IHG 576
Query: 148 VCRILSSSMDWSLIQEKLEKSAIR---FTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGY 204
+C + +L++EK+ K ++ T ++ L + H F + G
Sbjct: 577 LCAD-GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS--GT 633
Query: 205 KHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMN 264
K A +Y I+ ++ +MR N T++ +I YG +G TN A +
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 265 CFKEIKADGYSPSRSTYKYLIIALCGRKGRK----------------VDDALKMYGEMIN 308
K ++ G PS+ T+ LI L K K D +++ +M+
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVE 366
P+ + E + +CEVG++ A K D +++ P L ++ ++ C+ K
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 367 EALALAGEVVGAEKSSLDQV-TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTS 425
EA + +++ L Q+ +C +I L +KG E + + Q G +
Sbjct: 814 EAAKVVDDMICV--GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871
Query: 426 LIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
+I K+ V E+ M+++G + + T S LI G
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 17/339 (5%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
+YN +K ++ L +M++N T+ ++ Y ++G A + +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 270 KADGYSPSRSTYKYLIIALCG----RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
K P TY LI LC R+G ++ DA+K + PD T +
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK------SLKLQPDVVTYNTLIDGC 355
Query: 326 CEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLD 384
E+G LEARK + ++ G +++++ ++ LC+ K E E+V S D
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 385 QVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
VT ++I A L+ G L AL + M Q+GIK+ +++ KE+++ +A ++
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 445 EMQQSGYEPNVVTCSALIRGYM---NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ G+ + VT LI G+ VE+ ++ W+ ++K+ P T++ L+ LC
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT---PTVSTFNSLIGGLC 532
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
G++E AM+ ++ + G++P F ++ G +EG+
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGS---VLEARKCTDSLKKIGYTVPL-SYSL 354
AL+++ +MI P+ T L L S + AR+ D + KIG ++ + ++++
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
++ C GK+E+AL + +V K + D VT +I+ A+ +KGRL D + MK+
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
G+ Y +L+ + K + +A +I+E M+Q+ P++ T + LI G N +
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
+ MK PD TY+ L+ ++G S EA KL+ +M + G+ + +
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 535 LNREGKRD 542
L +E KR+
Sbjct: 390 LCKEEKRE 397
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 5/269 (1%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G+SP TY LI A K + AL+M EM G + + T L LC+ +
Sbjct: 411 GFSPDIVTYHTLIKAYL--KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
Query: 333 EARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
EA +S K G+ V ++Y +I R KVE+AL + E+ K + T S+
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV-KITPTVSTFNSL 527
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
I L G+ E A+ K D + + G+ + S+I+ + KE +V KA E E + +
Sbjct: 528 IGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
+P+ TC+ L+ G A N F+ ++ D TY+ +++ CK + +EA
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALN-FFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 512 LIFKMLDCGIVPSTINFRTVFFGLNREGK 540
L+ +M + G+ P + + L +GK
Sbjct: 647 LLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 8/313 (2%)
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
+T T I ++ Y + A F ++ G S + T+ L+ C K++DAL
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEG--KLEDAL 224
Query: 301 KMYGEMINAGHV-PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIR 357
M M++ V PD T L + + G + + ++ +KK G VP ++Y+ ++
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGL-VPNRVTYNNLVY 283
Query: 358 ALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIK 417
C+ G ++EA + E++ D T +I+ L G + + L +DAMK ++
Sbjct: 284 GYCKLGSLKEAFQIV-ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ 342
Query: 418 LTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE-RPIDAWN 476
+ Y +LI F+ +A +++E+M+ G + N VT + ++ E R
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 477 VFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLN 536
V + + G PD TY L+ KVG A++++ +M GI +TI T+ L
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 537 REGKRDLARVVLQ 549
+E K D A +L
Sbjct: 463 KERKLDEAHNLLN 475
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 44/351 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T +IMI + R + A + +I GY P + L+ LC +V +AL++
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC--RVSEALELVD 182
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV---------------- 348
M+ GH P + T + LC G V +A D + + G+
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 349 --------------------PLSYSLIIRALCRAGKVEEALALAGEV-VGAEKSSLDQVT 387
+ YS+II LC+ G ++ A L E+ + K+ D +T
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA--DIIT 300
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
++I GR +D + M ++ I + ++ LI F KE ++ +A ++++EM
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
Q G PN +T ++LI G+ R +A + M KG PD T+++L+ CK R +
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 508 EAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRRR 558
+ ++L +M G++ +T+ + T+ G + GK ++A+ + Q+ ++ RR
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE---MVSRR 468
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 37/303 (12%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G+ P+ T L+ LC KV DA+ + M+ G P++ L +C+ G
Sbjct: 188 GHKPTLITLNTLVNGLC--LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 333 EARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGE---------------VV 376
A + +++ + + YS+II LC+ G ++ A L E ++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 377 GA-------------------EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIK 417
G K S + VT +I + +++G+L +A + M Q+GI
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 418 LTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNV 477
Y SLI F KE ++ +A+++++ M G +P+++T + LI GY R D +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 478 FYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNR 537
F M L+G + TY+ L+ C+ G+ E A KL +M+ + P ++++ + GL
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 538 EGK 540
G+
Sbjct: 486 NGE 488
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 147/328 (44%), Gaps = 14/328 (4%)
Query: 203 GYKHTAESYNLAIK-IAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNM 261
G+K T + N + + ++GK L M + T+ ++ + + G T +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGK-VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
AM ++++ Y +I LC K +D+A ++ EM G D T
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 322 LGCLCEVGSVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
+G C G + K + +KI V +++S++I + + GK+ EA L E++
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNV-VTFSVLIDSFVKEGKLREADQLLKEMM-QR 362
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
+ + +T S+I ++ RLE+A+ +D M +G I + LI + K ++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+E+ EM G N VT + L++G+ + A +F M + PD +Y +LL
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 500 LCKVGRSEEAMKLIFKM------LDCGI 521
LC G E+A+++ K+ LD GI
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 157/365 (43%), Gaps = 9/365 (2%)
Query: 172 FTPEFVV--EVLQICNKYGHNVLNFFSWVRK--QPGYKHTAESYNLAIKIAVSGKDFKHM 227
F P V VL + K G L +RK + K A Y++ I +
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAM-ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIA 287
NLF EM + T+ +I + G + +++ SP+ T+ LI +
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
K K+ +A ++ EM+ G P+ + + C+ + EA + D + G
Sbjct: 343 FV--KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 348 VP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
++++++I C+A ++++ L L E+ + VT +++ + G+LE A
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
M + ++ I Y L+ ++ KA+EI ++++S E ++ +I G
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
N + DAW++F + LKG D Y+++++ LC+ +A L KM + G P +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 527 NFRTV 531
+ +
Sbjct: 580 TYNIL 584
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 144/347 (41%), Gaps = 38/347 (10%)
Query: 189 HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI 248
N N F+ + + G+K +YN I + + L +M + T+++
Sbjct: 280 DNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGR----------------- 291
+I + + G A KE+ G +P+ TY LI C
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 292 ----------------KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
K ++DD L+++ EM G + + T + C+ G + A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 336 KCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH 393
K + +++ + +SY +++ LC G++E+AL + G++ + K LD IIH
Sbjct: 459 KLFQEMVSRRVRPDI-VSYKILLDGLCDNGELEKALEIFGKIEKS-KMELDIGIYMIIIH 516
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
+ +++DA ++ +G+KL Y +I ++ + KA + +M + G+ P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+ +T + LIR ++ + A + MK G D T M++ L
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 45/301 (14%)
Query: 290 GRKGRKVDDALKMYGEMINAGHVP---DKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
G G K DDA+ ++ +MI + +P D + + + + VL K +S K I +
Sbjct: 63 GLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES-KGIAH 121
Query: 347 TVPLSYSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
++ + S++I CR K+ A + G++ +G E D V ++++ L + R+ +A
Sbjct: 122 SI-YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEP---DTVIFNTLLNGLCLECRVSEA 177
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT------- 457
L +D M + G K T+ +L+ +V A+ +I+ M ++G++PN VT
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 458 -C---------------------------SALIRGYMNVERPIDAWNVFYRMKLKGPFPD 489
C S +I G +A+N+F M++KG D
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 490 FETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
TY+ L+ C GR ++ KL+ M+ I P+ + F + +EGK A +L+
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 550 Q 550
+
Sbjct: 358 E 358
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 171/400 (42%), Gaps = 62/400 (15%)
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
+ H ES L I DF + N+ +M++ + + ++ + + N+ M
Sbjct: 60 FTHMVESRPLPSII-----DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 264 NCF-------------KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
NCF ++ G+ P T+ LI C G ++++A+ M +M+ G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC--LGNRMEEAMSMVNQMVEMG 172
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEAL 369
PD + T + LC+ G V A D ++ G + Y+ ++ LC +G+ +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 370 ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVH 429
+L + K D +T ++I A +++G+ DA + M + I I YTSLI
Sbjct: 233 SLLRGMT-KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 430 FFKE-----------------------------------KQVGKAMEIIEEMQQSGYEPN 454
F E K+V AM+I EM Q G N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
+T + LI+G+ V +P A VF M +G P+ TY++LL CLC G+ ++A+ +
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 515 KM----LDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
M +D G+ P+ + + GL GK + A +V +
Sbjct: 412 DMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 142/327 (43%), Gaps = 39/327 (11%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
N A++ F + PS + L+ + K +K D + + + G D
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIA--KMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
+ C C+ A + K+G+ + +++ +I C ++EEA+++ ++V
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
D V +II +L + G + AL+ D M+ GI+ + +YTSL+ +
Sbjct: 172 GIKP-DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA---WN------------------- 476
A ++ M + +P+V+T +ALI ++ + +DA +N
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 477 -------------VFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
+FY M+ KG FPD Y+ L+ CK + ++AMK+ ++M G+
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 524 STINFRTVFFGLNREGKRDLARVVLQQ 550
+TI + T+ G + GK ++A+ V
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSH 377
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 11/282 (3%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
++N I V F L+ EM R + T+T +I + G + A F +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
+ G P Y LI C K +KVDDA+K++ EM G + T + +VG
Sbjct: 309 ETKGCFPDVVAYTSLINGFC--KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 330 SVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-- 386
A++ + G + +Y++++ LC GKV++AL + ++ +K +D V
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM---QKREMDGVAP 423
Query: 387 ---TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
T ++H L G+LE AL + M+++ + + I YT +I K +V A+ +
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKG 485
+ G +PNVVT + +I G +A +F +MK G
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 5/301 (1%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
+ +M+ +S T ++ + +GL A N F E+ G P S+YK ++I C
Sbjct: 169 MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIG-C 227
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
R G K+ +A + MI G +PD L LCE G V A + +G+
Sbjct: 228 FRDG-KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPN 286
Query: 350 L-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK- 407
L +++ +I LC+ G +++A + E+V + T ++I L ++G E A
Sbjct: 287 LINFTSLIDGLCKKGSIKQAFEMLEEMV-RNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
+ ++ K +H YTS+I + KE ++ +A + M++ G PNV T + LI G+
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
A+ + M +G P+ TY+ + LCK R+ EA +L+ K CG+ +
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 465
Query: 528 F 528
+
Sbjct: 466 Y 466
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 3/323 (0%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
+ G ++ + N ++IAV ++ N+F EM S ++ +M++ R G
Sbjct: 174 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
A + G+ P +T ++ ALC + V+ A+ + +MI+ G P+
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALC--ENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
+ + LC+ GS+ +A + + + + G+ + +++ +I LC+ G E+A L ++V +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
+ + T S+I ++ +L A MK+QG+ ++ YT+LI K G+
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A E++ M G+ PN+ T +A I R +A+ + + G D TY++L+
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 499 CLCKVGRSEEAMKLIFKMLDCGI 521
CK +A+ +M G
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGF 494
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 151/350 (43%), Gaps = 7/350 (2%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G+K ++ I K + EM RN + T T +I + G T A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 263 MNCF-KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
F K +++D Y P+ TY +I C K K++ A ++ M G P+ T
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYC--KEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ C+ GS A + + + G+ + +Y+ I +LC+ + EA L +
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ D VT +I ++ + ALA M + G + + + LI F ++K++ ++
Sbjct: 460 EA-DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPID-AWNVFYRMKLKGPFPDFETYSMLLTC 499
+ + + G P T +++I Y E ID A F+ MK G PD TY L++
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCK-EGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
LCK +EA KL M+D G+ P + T+ + + A ++L+
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 170/424 (40%), Gaps = 55/424 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G + I +A+++ + M G KP ++T I LCK TE ++ ++
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL---- 348
Query: 61 IAIRDEVFHW-VITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQ-VFVGIKVEEDV 118
+R + + V TY G + ++K+ + A FS K+Q +F + +
Sbjct: 349 --VRSDTYKPNVHTYTSMIGGYCKEDKLNR-------AEMLFSRMKEQGLFPNVNTYTTL 399
Query: 119 RVDQLKSEKVDCSL----------VLPHLKTYSERDVHEVCRILSSSMDWSLIQEK---- 164
K+ + +P++ TY+ + +C+ + + L+ +
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA-IDSLCKKSRAPEAYELLNKAFSCG 458
Query: 165 LEKSAIRFTPEFVVEVLQICNKYGHN-VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKD 223
LE + +T + + + C + N L FF + K G++ N+ I K
Sbjct: 459 LEADGVTYT----ILIQEQCKQNDINQALAFFCRMNKT-GFEADMRLNNILIAAFCRQKK 513
Query: 224 FKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
K LF + T ET+T MI Y + G ++A+ F +K G P TY
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS 573
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
LI LC K VD+A K+Y MI+ G P + + V E K DS
Sbjct: 574 LISGLC--KKSMVDEACKLYEAMIDRGLSPPE---------VTRVTLAYEYCKRNDSANA 622
Query: 344 IGYTVPLSYSL-------IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALL 396
+ PL L ++R LC KV A AL + + + SS D+VT + A
Sbjct: 623 MILLEPLDKKLWIRTVRTLVRKLCSEKKVGVA-ALFFQKLLEKDSSADRVTLAAFTTACS 681
Query: 397 RKGR 400
G+
Sbjct: 682 ESGK 685
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 168/382 (43%), Gaps = 26/382 (6%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNL------------------FF 232
VL+FF W R + ES + I +AV+ KD K ++L FF
Sbjct: 104 VLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFF 161
Query: 233 EM---RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
++ ++ + + + GL A F+++ G S + + L
Sbjct: 162 DLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL- 220
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
+ K A+ ++ E G + + +C++G + EA ++ GYT
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 350 -LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
+SYS ++ CR G++++ L EV+ + + GSII L R +L +A
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
M +QGI VYT+LI F K + A + EM P+V+T +A+I G+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
++A +F+ M KG PD T++ L+ CK G ++A ++ M+ G P+ + +
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 529 RTVFFGLNREGKRDLARVVLQQ 550
T+ GL +EG D A +L +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHE 481
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 8/333 (2%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
SYN+ I K +L M Y +++ ++ Y R G + + +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
K G P+ Y +I LC + K+ +A + + EMI G +PD + T + C+ G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLC--RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 330 SVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQV 386
+ A K + T L+Y+ II C+ G + EA L E+ G E D V
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP---DSV 422
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
T +I+ + G ++DA + M Q G + YT+LI KE + A E++ EM
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
+ G +PN+ T ++++ G +A + + G D TY+ L+ CK G
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
++A +++ +ML G+ P+ + F + G G
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 4/329 (1%)
Query: 223 DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYK 282
D + F+EM + T+T +I + +IG A F E+ G P T+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK 342
LI C K + DA +++ MI AG P+ T + LC+ G + A + +
Sbjct: 426 ELINGYC--KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 343 KIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
KIG + +Y+ I+ LC++G +EEA+ L GE A ++ D VT +++ A + G +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEM 542
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
+ A + M +G++ TI + L+ F + +++ M G PN T ++L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
++ Y A ++ M +G PD +TY L+ CK +EA L +M G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 522 VPSTINFRTVFFGLNREGKRDLARVVLQQ 550
S + + G + K AR V Q
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 168/382 (43%), Gaps = 26/382 (6%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNL------------------FF 232
VL+FF W R + ES + I +AV+ KD K ++L FF
Sbjct: 104 VLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFF 161
Query: 233 EM---RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
++ ++ + + + GL A F+++ G S + + L
Sbjct: 162 DLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL- 220
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
+ K A+ ++ E G + + +C++G + EA ++ GYT
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 350 -LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
+SYS ++ CR G++++ L EV+ + + GSII L R +L +A
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
M +QGI VYT+LI F K + A + EM P+V+T +A+I G+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
++A +F+ M KG PD T++ L+ CK G ++A ++ M+ G P+ + +
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 529 RTVFFGLNREGKRDLARVVLQQ 550
T+ GL +EG D A +L +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHE 481
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 8/333 (2%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
SYN+ I K +L M Y +++ ++ Y R G + + +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
K G P+ Y +I LC + K+ +A + + EMI G +PD + T + C+ G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLC--RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 330 SVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQV 386
+ A K + T L+Y+ II C+ G + EA L E+ G E D V
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP---DSV 422
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
T +I+ + G ++DA + M Q G + YT+LI KE + A E++ EM
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
+ G +PN+ T ++++ G +A + + G D TY+ L+ CK G
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
++A +++ +ML G+ P+ + F + G G
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 4/329 (1%)
Query: 223 DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYK 282
D + F+EM + T+T +I + +IG A F E+ G P T+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK 342
LI C K + DA +++ MI AG P+ T + LC+ G + A + +
Sbjct: 426 ELINGYC--KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 343 KIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
KIG + +Y+ I+ LC++G +EEA+ L GE A ++ D VT +++ A + G +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-DTVTYTTLMDAYCKSGEM 542
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
+ A + M +G++ TI + L+ F + +++ M G PN T ++L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
++ Y A ++ M +G PD +TY L+ CK +EA L +M G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 522 VPSTINFRTVFFGLNREGKRDLARVVLQQ 550
S + + G + K AR V Q
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 208/514 (40%), Gaps = 46/514 (8%)
Query: 6 VSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRD 65
V + +A K++ M +GI P S+T+ +K CK SR L++L+ M + +
Sbjct: 122 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 181
Query: 66 EVFHWVIT--YLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQL 123
+ V+ Y EN + + + + L F+ K + V K + DV+ +
Sbjct: 182 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFN---KLLRVLCK-KGDVKECEK 237
Query: 124 KSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQI 183
+KV VLP+L TY+ L Q A+R +
Sbjct: 238 LLDKVIKRGVLPNLFTYN-------------LFIQGLCQRGELDGAVRMVGCLI------ 278
Query: 184 CNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS 243
+ G K +YN I F+ +M S
Sbjct: 279 -----------------EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T+ +I Y + G+ +A + +G+ P + TY+ LI LC + + AL ++
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG--ETNRALALF 379
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRA 362
E + G P+ L T + L G +LEA + + + + G + ++++++ LC+
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G V +A L +V+ ++ D T +IH + ++E+AL +D M G+ ++
Sbjct: 440 GCVSDADGLV-KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y SL+ K + ME + M + G PN+ T + L+ + +A + MK
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
K PD T+ L+ CK G + A L KM
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 272 DGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
+G P TY LI C KG V A ++ G+ + G VPD+ + + LC G
Sbjct: 315 EGLEPDSYTYNTLIAGYC--KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 332 LEARKC-TDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-TCG 389
A ++L K + Y+ +I+ L G + EA LA E+ +EK + +V T
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM--SEKGLIPEVQTFN 430
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
+++ L + G + DA + M +G I + LI + + ++ A+EI++ M +
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
G +P+V T ++L+ G + D + M KG P+ T+++LL LC+ + +EA
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ L+ +M + + P + F T+ G + G D A + ++
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 118/543 (21%), Positives = 231/543 (42%), Gaps = 36/543 (6%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+V G N +E +++F M G+ ++ ++ LCK ++ K+LD++
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGI----KVEE 116
+ ++ I L +GE + V+ + + P+ + + G+ K +E
Sbjct: 247 VLPNLFTYNLFIQGLCQRGE--LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 117 -DVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQ--EKLEKSAI--R 171
+V + ++ +E ++ P TY+ +++ ++Q E++ A+
Sbjct: 305 AEVYLGKMVNEGLE-----PDSYTYN--------TLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 172 FTPE-FVVEVL--QICNKYGHN-VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHM 227
F P+ F L +C++ N L F+ + G K YN IK +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGLSNQGMILEA 410
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIA 287
L EM +T+ I++ ++G + A K + + GY P T+ LI
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
+ K+++AL++ M++ G PD + L LC+ + + ++ + G
Sbjct: 471 YSTQ--LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 348 VPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
L ++++++ +LCR K++EAL L E+ + D VT G++I + G L+ A
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP-DAVTFGTLIDGFCKNGDLDGAYT 587
Query: 407 KIDAMKQQGIKLTIHVYT-SLIVHFFKEK-QVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
M ++ K++ T ++I+H F EK V A ++ +EM P+ T ++ G
Sbjct: 588 LFRKM-EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
+ + M G P T ++ CLC R EA +I +M+ G+VP
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Query: 525 TIN 527
+N
Sbjct: 707 AVN 709
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 167/380 (43%), Gaps = 8/380 (2%)
Query: 174 PEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAI-KIAVSGKDFKHMRNLFF 232
P+ V V++ C K L F+ +RK+ G+KHT +Y I K+ GK F+ M +
Sbjct: 7 PKHVTAVIK-CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGK-FEAMEEVLV 64
Query: 233 EMRRN-NYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGR 291
+MR N + + + YGR G A+N F+ + D Y + + Y I
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFE--RMDFYDCEPTVFSYNAIMSVLV 122
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL- 350
D A K+Y M + G PD + C+ A + +++ G + +
Sbjct: 123 DSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 182
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y ++ E L G+++ A SL T ++ L +KG +++ +D
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKML-ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
+ ++G+ + Y I + ++ A+ ++ + + G +P+V+T + LI G +
Sbjct: 242 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+A +M +G PD TY+ L+ CK G + A +++ + G VP +R+
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 531 VFFGLNREGKRDLARVVLQQ 550
+ GL EG+ + A + +
Sbjct: 362 LIDGLCHEGETNRALALFNE 381
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 8/294 (2%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
++ ++ F ++ G +Y +I LC R R V AL + G+M+ G+ PD +
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLC-RCSRFVI-ALSVVGKMMKFGYEPDVVTVS 143
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGA 378
+ + C+ V +A ++++G+ + Y+ II C+ G V +A+ L +
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM--- 200
Query: 379 EKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQV 436
E+ + D VT S++ L GR DA + M + I + +T++I F KE +
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
+AM++ EEM + +P+V T ++LI G R +A + M KG PD TY+ L
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ CK R +E KL +M G+V TI + T+ G + G+ D A+ + +
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 173/414 (41%), Gaps = 86/414 (20%)
Query: 216 KIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS 275
KIA S K++ + +LF M ++ I+I R +A++ ++ GY
Sbjct: 78 KIAKS-KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYE 136
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P T LI C +G +V DA+ + +M G PD + T + C++G V +A
Sbjct: 137 PDVVTVSSLINGFC--QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 336 KCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVV------------------ 376
+ D +++ G ++Y+ ++ LC +G+ +A L ++V
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 377 ---GAEKSSL-------------DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
G ++ D T S+I+ L GR+++A +D M +G +
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
Y +LI F K K+V + ++ EM Q G + +T + +I+GY RP A +F R
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 481 MKLKGPFPDFETYSMLLTCLC-----------------------------------KVGR 505
M + P+ TYS+LL LC K+G
Sbjct: 375 MDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 506 SEEAMKLIFKMLDC-GIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRRR 558
E+A L F+ L C G+ P +++ T+ G R+ + D KSDL+ R+
Sbjct: 432 VEDAWDL-FRSLSCKGLKPDVVSYTTMISGFCRKRQWD--------KSDLLYRK 476
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 42/305 (13%)
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC--GR--------------------- 291
+IGL N A+ F ++ DG TY L+ LC GR
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 292 ----------KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
K K +A+K+Y EM PD + + LC G V EA++ D +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 342 KKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL-DQVTCGSIIHALLRK 398
G +P ++Y+ +I C++ +V+E L E+ A++ + D +T +II +
Sbjct: 306 VTKG-CLPDVVTYNTLINGFCKSKRVDEGTKLFREM--AQRGLVGDTITYNTIIQGYFQA 362
Query: 399 GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTC 458
GR DA +I + + I Y+ L+ +V KA+ + E MQ+S E ++ T
Sbjct: 363 GR-PDAAQEI--FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 459 SALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
+ +I G + DAW++F + KG PD +Y+ +++ C+ + +++ L KM +
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Query: 519 CGIVP 523
G++P
Sbjct: 480 DGLLP 484
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 9/292 (3%)
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
K + Y S Y + I+ C + ++ AL + G+M+ G+ P + L C V
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 330 SVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQV 386
+ +A + K GY + Y+ +I LC+ G++ AL L E+ EK L D V
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVV 212
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
T +++ L GR DA + M ++ I + +T+LI F K+ + +A E+ +EM
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
QS +PN VT +++I G R DA F M KG FP+ TY+ L++ CK
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRRR 558
+E MKL +M G + T+ G + GK RV L ++ RR
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK---LRVALDIFCWMVSRR 381
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 8/241 (3%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
GY P+ Y LI LC K +++ AL++ EM G D T L LC G
Sbjct: 171 GYEPNVVVYNTLIDGLC--KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 333 EA-RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLD--QVTCG 389
+A R D +K+ ++++ +I + G ++EA L E++ +SS+D VT
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI---QSSVDPNNVTYN 285
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
SII+ L GRL DA D M +G + Y +LI F K + V + M++ + M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
G+ ++ T + LI GY V + A ++F M + PD T+ +LL LC G E A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 510 M 510
+
Sbjct: 406 L 406
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 150/322 (46%), Gaps = 10/322 (3%)
Query: 230 LFFEMRRNNYPVTSE--TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIA 287
++F + Y ++ + ++TI+I + R + A++ ++ GY PS T+ L+
Sbjct: 91 IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
C ++ DA + M+ +G+ P+ + T + LC+ G + A + + ++K G
Sbjct: 151 FC--LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 348 VPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDA 404
+ +Y+ ++ LC +G+ +A + +++ K S+ D VT ++I +++G L++A
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMM---KRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
M Q + Y S+I ++ A + + M G PNVVT + LI G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
+ + +F RM +G D TY+ L+ C+VG+ A+ + M+ + P
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 525 TINFRTVFFGLNREGKRDLARV 546
I + GL G+ + A V
Sbjct: 386 IITHCILLHGLCVNGEIESALV 407
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 4/323 (1%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
+ GY+ YN I + L EM + T+ ++ G +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
A +++ +P T+ LI K +D+A ++Y EMI + P+ +
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFV--KQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
+ LC G + +A+K D + G + ++Y+ +I C+ V+E + L + + E
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF-QRMSCE 345
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
+ D T ++IH + G+L AL M + + I + L+ ++ A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ ++M++S +V + +I G ++ AW +F R+ ++G PD TY++++
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 500 LCKVGRSEEAMKLIFKMLDCGIV 522
LCK G EA +LI +M + GI+
Sbjct: 466 LCKNGPRREADELIRRMKEEGII 488
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 188/429 (43%), Gaps = 53/429 (12%)
Query: 155 SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNV-----LNFFSWVRKQPGYKH-TA 208
S+D+S I+ + +P V V++ C H + L FF+W + Y H +
Sbjct: 98 SLDFSQIETS------QVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSP 151
Query: 209 ESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKE 268
YN I ++ + F +L M+ N ++ ET+TI+I Y R GL + A++CF
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEV 328
++ G P + + ++I+ RK R+ +A + + + PD + + C
Sbjct: 212 MEDYGCVPDKIAFS-IVISNLSRK-RRASEAQSFFDSLKDRFE-PDVIVYTNLVRGWCRA 268
Query: 329 GSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVV--GAEKSSL-- 383
G + EA K +K G + +YS++I ALCR G++ A + +++ G +++
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 384 ------------------------------DQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
D +T +I A R LE+A+ ++ M +
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
+ ++ + ++ + K++ V A + +M ++ EPN VT + L+R ++ +
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD--CGIVPSTINFRTV 531
+ M K P+ TY +L+T C +G A KL +M++ C + PS + V
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKC-LTPSLSLYEMV 507
Query: 532 FFGLNREGK 540
L R G+
Sbjct: 508 LAQLRRAGQ 516
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 231 FFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCG 290
FF+ ++ + +T ++ + R G + A FKE+K G P+ TY +I ALC
Sbjct: 243 FFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC- 301
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-P 349
R G ++ A ++ +M+++G P+ + + G + + + +KK+G
Sbjct: 302 RCG-QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
++Y+ +I A CR +E A+ + ++ +K ++ T +I + +K + A
Sbjct: 361 ITYNFLIEAHCRDENLENAVKVLNTMI-KKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M + + Y L+ F K +++ +EM EPNV T L+ + +
Sbjct: 420 KMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMG 479
Query: 470 RPIDAWNVFYRM-KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
+A+ +F M + K P Y M+L L + G+ ++ +L+ KM+ G+V
Sbjct: 480 HWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 161/360 (44%), Gaps = 16/360 (4%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G T ++N + D + + ++ EM+R N + T+ I+I + + G A
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+++ G++ + ++ LI C K DDA + EM+NAG P Y+
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYC--KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEV-VGAE 379
LC+ G + +AR+ S+ P +SY+ ++ + GK EA L ++ G
Sbjct: 351 CALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDI 405
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
S+ VT ++I L G LE A + M Q I + YT+L+ F K + A
Sbjct: 406 HPSI--VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM-KLKGPFPDFETYSMLLT 498
E+ +EM + G +P+ + G + + A+ + M PD Y++ +
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRRR 558
LCKVG +A++ K+ G+VP + + TV G G+ +AR + + ++R+R
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE---MLRKR 580
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 159/373 (42%), Gaps = 46/373 (12%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
+YN+ I + R +MRR+ + VT ++ +I Y + GL + A E+
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
G P+ STY I ALC GR +DDA E++++ PD T + ++G
Sbjct: 335 LNAGIYPTTSTYNIYICALCDF-GR-IDDA----RELLSSMAAPDVVSYNTLMHGYIKMG 388
Query: 330 SVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
+EA D L+ G P ++Y+ +I LC +G +E A L E+ + D +T
Sbjct: 389 KFVEASLLFDDLRA-GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT-TQLIFPDVIT 446
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
+++ ++ G L A D M ++GIK + YT+ V + KA + EEM
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 448 QS------------------------------------GYEPNVVTCSALIRGYMNVERP 471
+ G P+ VT + +IRGY+ +
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
A N++ M K +P TY +L+ K GR E+A + +M G+ P+ + +
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 532 FFGLNREGKRDLA 544
+G+ + G D A
Sbjct: 627 LYGMCKAGNIDEA 639
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 170/421 (40%), Gaps = 31/421 (7%)
Query: 151 ILSSSMDWSLIQEKLEKSAIRF---TPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHT 207
ILSS D + K R P ++ VL + FF+W+++Q K +
Sbjct: 59 ILSSHGDSNKPNRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQS 118
Query: 208 AESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI----------------- 250
+++ ++I ++ D M + R+ E ++I
Sbjct: 119 RQAFAAMLEI-LAENDL--MSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLL 175
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+Y + + + F+++ G+ PS ++ L R R ++ A +Y MI G
Sbjct: 176 WVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVL--RDSRMMNKASAVYETMIEHG 233
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEAL 369
+P T L + G + K +K+ ++Y+++I + GK+EEA
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 370 ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVH 429
G++ + ++ + +I ++G +DA D M GI T Y I
Sbjct: 294 RFHGDMRRS-GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 430 FFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPD 489
++ A E++ M P+VV+ + L+ GY+ + + ++A +F ++ P
Sbjct: 353 LCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Query: 490 FETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
TY+ L+ LC+ G E A +L +M I P I + T+ G + G +A V
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 550 Q 550
+
Sbjct: 469 E 469
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 38/295 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+T ++ + + G +MA + E+ G P Y Y A+ + D A +++
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD--GYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 305 EMINAGH-VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAG 363
EM+ H PD + + LC+VG++++A + + ++G VP
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG-LVP-------------- 548
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
D VT ++I L G+ + A D M ++ + ++ Y
Sbjct: 549 --------------------DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
LI K ++ +A + EM++ G PNV+T +AL+ G +A+ +M+
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
+G P+ +Y+ML++ C + EE +KL +MLD I P R +F L ++
Sbjct: 649 EGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 37/341 (10%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T++I I + R ++A+ ++ GY P T L+ C K ++ DA+ +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK--RISDAVALVD 177
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+M+ G+ PD T + L EA D + + G L +Y ++ LC+ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 364 KVEEALALAGEVVGAE--------KSSLDQ--------------------------VTCG 389
++ AL L ++ A + +D VT
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
S+I+ L GR DA + M ++ I + + +LI FFKE ++ +A ++ EEM Q
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
+P+ +T + LI G+ R +A +F M K P+ +TY+ L+ CK R E+
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
++L +M G+V +T+ + T+ G + G D A++V +Q
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 47/287 (16%)
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYS 353
KVDDA+ ++G+M+ + P L + ++ + ++ +G + L +YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 354 LIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
+ I CR ++ ALA+ ++ +G E D VT S+++ R+ DA+A +D M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEP---DIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG------- 464
+ G K +T+LI F + +A+ ++++M Q G +P++VT ++ G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 465 -------------------------------YMNVERPIDAWNVFYRMKLKGPFPDFETY 493
Y +VE +D +F M+ KG P+ TY
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD---LFTEMETKGIRPNVVTY 296
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+ L+ CLC GR +A +L+ ML+ I P+ + F + +EGK
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
G ++A+N +++A + + +I +LC K R V+ A+ ++ EM G P+
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLC--KYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 317 LIETYLGCLCEVGSVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGE 374
+ + CLC G +A + ++ KKI V ++++ +I A + GK+ EA L E
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV-VTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 375 VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
++ D +T +I+ RL++A M + I Y +LI F K K
Sbjct: 354 MI-QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
+V +E+ EM Q G N VT + +I+G+ A VF +M D TYS
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 495 MLLTCLCKVGRSEEAMKLIFKML 517
+LL LC G+ + A+ +IFK L
Sbjct: 473 ILLHGLCSYGKLDTAL-VIFKYL 494
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 224/526 (42%), Gaps = 34/526 (6%)
Query: 19 KSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVF---HWVITYL 75
+ M+ GI +Y++FI C+ S+ L VL +M K+ ++ + Y
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM--KLGYEPDIVTLSSLLNGYC 164
Query: 76 ENKGEFAVKEKVQQMHTASKLAPEKFSESK--KQVFVGIKVEEDVR-VDQLKSEKVDCSL 132
+K V QM P+ F+ + +F+ K E V VDQ+
Sbjct: 165 HSKRISDAVALVDQM-VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--- 220
Query: 133 VLPHLKTYSERDVHEVCRILSSSMDWSL-IQEKLEKSAIRFTPEFVVEVLQICNKYGHN- 190
P L TY V+ +C+ +D +L + K+E + I+ ++ KY H
Sbjct: 221 --PDLVTYGTV-VNGLCK--RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 191 -VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIM 249
++ F+ + + G + +YN I + + L M T+ +
Sbjct: 276 VAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 250 IMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA 309
I + + G A +E+ P TY LI C ++D+A +M+ M++
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN--RLDEAKQMFKFMVSK 392
Query: 310 GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK---IGYTVPLSYSLIIRALCRAGKVE 366
+P+ + T + C+ V + + + + +G TV +Y+ II+ +AG +
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV--TYTTIIQGFFQAGDCD 450
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
A + ++V + + D +T ++H L G+L+ AL +++ ++L I +Y ++
Sbjct: 451 SAQMVFKQMV-SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP 486
I K +VG+A ++ + +P+VVT + +I G + +A ++F +MK G
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV--PSTINFRT 530
P+ TY+ L+ + + +LI +M G V STI+ T
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVT 612
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
KV++A+ L G++V + V ++ A+ + + E ++ + M+ GI ++ Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFP-SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+ I F + Q+ A+ ++ +M + GYEP++VT S+L+ GY + +R DA + +M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
G PD T++ L+ L ++ EA+ L+ +M+ G P + + TV GL + G DL
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 544 ARVVLQQ 550
A +L +
Sbjct: 242 ALNLLNK 248
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 48/322 (14%)
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
+A++ F E++ G P+ TY LI LC GR DA ++ M+ P+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNY-GRW-SDASRLLSNMLEKKINPNVVTFNA 333
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
+ + G ++EA K + + + ++Y+L+I C +++EA + +V
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV--S 391
Query: 380 KSSLDQV-TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
K L + T ++I+ + R+ED + M Q+G+ YT++I FF+
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 439 AMEIIEEM-----------------------------------QQSGYEPNVVTCSALIR 463
A + ++M Q+S E N+ + +I
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
G + +AW++F + +K PD TY+ +++ LC +EA L KM + G +P
Sbjct: 512 GMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 524 STINFRTVFFGLNREGKRDLAR 545
++ + T+ R RD R
Sbjct: 569 NSGTYNTLI----RANLRDCDR 586
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 166/373 (44%), Gaps = 6/373 (1%)
Query: 165 LEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWV-RKQPGYKHTAESYNLAIKIAVSGKD 223
L +TP V VL+ +G L FF ++ Y H A S++LAI IA
Sbjct: 47 LSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHL 106
Query: 224 FKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
+ +L MR + +T+ I+ Y G + A+ F + G +++
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
++ LC K ++V+ A +++ + V D L C + +A + + +
Sbjct: 167 ILDVLC--KSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVE 223
Query: 344 IGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLE 402
G L+ Y+ +++ RAG++ A E+ +D VT +++H G ++
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 403 DALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI 462
A D M ++G+ ++ Y ++I K+ V A+ + EEM + GYEPNV T + LI
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 463 RGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
RG + + RM+ +G P+F+TY+M++ + E+A+ L KM +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 523 PSTINFRTVFFGL 535
P+ + + G+
Sbjct: 403 PNLDTYNILISGM 415
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
P +++++ AGK ++A+ L + D + +I+ L + R+E A
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNM-HEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
A++ + T+ Y ++ + K+ KA+E+++EM + G PN+ T + +++G+
Sbjct: 185 RALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
+ AW F MK + D TY+ ++ G + A + +M+ G++PS +
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 529 RTVFFGLNREGKRDLARVVLQQKSDLIRR 557
+ L ++ + A V+ ++ ++RR
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEE---MVRR 329
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 8/287 (2%)
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
G T++A+N +++A + Y +I +LC K R DDAL ++ EM N G P+
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC--KYRHEDDALNLFTEMENKGVRPNVI 289
Query: 317 LIETYLGCLCEVGSVLEA-RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEV 375
+ + CLC G +A R +D +++ +++S +I A + GK+ +A L E+
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 376 VGAEKSSLDQ--VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
+ K S+D T S+I+ RL +A ++ M ++ + Y +LI F K
Sbjct: 350 I---KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
K+V K ME+ EM Q G N VT + LI G+ +A VF +M G P+ TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
++LL LCK G+ +AM + + + P + + G+ + GK
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 37/341 (10%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ I+I + R ++A+ ++ GY P T L+ C G ++ DA+ +
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC--HGNRISDAVALVD 172
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+M+ G+ PD T + L EA D + + G L +Y ++ LC+ G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 364 KVEEALALAGEVVGA---------------------EKSSLDQ-------------VTCG 389
+ AL L ++ A E +L+ +T
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
S+I L GR DA + M ++ I + +++LI F K+ ++ KA ++ EEM +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
+PN+ T S+LI G+ ++R +A + M K P+ TY+ L+ CK R ++
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
M+L +M G+V +T+ + T+ G + D A++V +Q
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%), Gaps = 17/220 (7%)
Query: 347 TVPLSYSLI------------IRALCRAG----KVEEALALAGEVVGAEKSSLDQVTCGS 390
T PLS+S R + R G ++++A+ L G V+ + +
Sbjct: 25 TFPLSFSFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFG-VMAQSRPFPSIIEFSK 83
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
++ A+ + + + ++ + M+ GI ++ Y LI F + ++ A+ ++ +M + G
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
YEP++VT ++L+ G+ + R DA + +M G PD T++ L+ L ++ EA+
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
LI +M+ G P + + V GL + G DLA +L +
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 163/365 (44%), Gaps = 39/365 (10%)
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
K F + +L +M+R T+ I+I + R ++A+ ++ GY PS T
Sbjct: 24 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 83
Query: 282 KYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
L+ C G+++ DA+ + +M+ G+ PD T + L EA D +
Sbjct: 84 SSLLNGYC--HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 342 KKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR 400
+ G L +Y +++ LC+ G ++ A L ++ A K D V +II +L +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRH 200
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIV-------------------------------- 428
++DAL M+ +GI+ + Y+SLI
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 429 ---HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKG 485
F KE + +A ++ ++M + +P++ T ++LI G+ +R A +F M K
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 486 PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
FPD +TY+ L+ CK R E+ +L +M G+V T+ + T+ GL +G D A+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 546 VVLQQ 550
V +Q
Sbjct: 381 KVFKQ 385
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 209/530 (39%), Gaps = 56/530 (10%)
Query: 8 RNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEV 67
R+ IS A + M G +P+ + + + C R D + ++D+M
Sbjct: 58 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 68 FHWVI--TYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKS 125
F +I +L NK AV VD++
Sbjct: 118 FTTLIHGLFLHNKASEAV----------------------------------ALVDRMVQ 143
Query: 126 EKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICN 185
P+L TY V+ +C+ + ++L+ K+E + I ++
Sbjct: 144 RGCQ-----PNLVTYGVV-VNGLCKRGDIDLAFNLLN-KMEAAKIEADVVIFNTIIDSLC 196
Query: 186 KYGH--NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS 243
KY H + LN F + + G + +Y+ I S + L +M
Sbjct: 197 KYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T+ +I + + G A ++ P TY LI C ++D A +M+
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD--RLDKAKQMF 313
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK---IGYTVPLSYSLIIRALC 360
M++ PD + T + C+ V + + + +G TV +Y+ +I+ L
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV--TYTTLIQGLF 371
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
G + A + ++V ++ D +T ++ L G+LE AL D M++ IKL I
Sbjct: 372 HDGDCDNAQKVFKQMV-SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
++YT++I K +V ++ + G +PNVVT + +I G + +A+ + +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV--PSTINF 528
MK GP PD TY+ L+ + G + +LI +M C V STI
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 49/321 (15%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+N FKE++ G P+ TY LI LC GR DA ++ +MI P+
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSY-GR-WSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL------------------------------- 350
+ + G +EA K D + K +
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 351 -----SYSLIIRALCRAGKVEEALALAGE-----VVGAEKSSLDQVTCGSIIHALLRKGR 400
+Y+ +I+ C++ +VE+ L E +VG D VT ++I L G
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG------DTVTYTTLIQGLFHDGD 375
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
++A M G+ I Y+ L+ ++ KA+E+ + MQ+S + ++ +
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
+I G + D W++F + LKG P+ TY+ +++ LC +EA L+ KM + G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 521 IVPSTINFRTVFFGLNREGKR 541
+P + + T+ R+G +
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDK 516
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 88/160 (55%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
++ A+ + + + ++ + M++ GI ++ Y LI F + Q+ A+ ++ +M + G
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
YEP++VT S+L+ GY + +R DA + +M G PD T++ L+ L ++ EA+
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
L+ +M+ G P+ + + V GL + G DLA +L +
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 175
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 155/344 (45%), Gaps = 43/344 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T++I I + R ++A+ ++ GY P T L+ C K ++ DA+ +
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK--RISDAVALVD 177
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+M+ G+ PD T + L EA D + + G L +Y ++ LC+ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 364 KVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
++ AL+L ++ EK + D V +II L + ++DAL M +GI+ +
Sbjct: 238 DIDLALSLLKKM---EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 422 VYTSLIV-----------------------------------HFFKEKQVGKAMEIIEEM 446
Y+SLI F KE ++ +A ++ +EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
+ +P++ T S+LI G+ +R +A ++F M K FP+ TYS L+ CK R
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
EE M+L +M G+V +T+ + T+ G + D A++V +Q
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 157/332 (47%), Gaps = 9/332 (2%)
Query: 224 FKHMR---NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRST 280
+KHM NLF EM T++ +I G + A ++ +P+ T
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 281 YKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTD- 339
+ LI A K K+ +A K+Y EMI PD + + C + EA+ +
Sbjct: 331 FSALIDAFV--KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 340 SLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL-DQVTCGSIIHALLRK 398
+ K + ++YS +I+ C+A +VEE + L E+ +++ + + VT ++IH +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYTTLIHGFFQA 446
Query: 399 GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTC 458
++A M G+ I Y L+ K ++ KAM + E +Q+S EP++ T
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 459 SALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
+ +I G + D W +F + LKG P+ Y+ +++ C+ G EEA L+ KM +
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 519 CGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G +P++ + T+ R+G R+ + ++++
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 150/333 (45%), Gaps = 45/333 (13%)
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
G ++A++ K+++ Y +I LC K + +DDAL ++ EM N G PD
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC--KYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 317 LIETYLGCLCEVGSVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGE 374
+ + CLC G +A + + +KI V +++S +I A + GK+ EA L E
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNV-VTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 375 VVGAEKSSLDQ--VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
++ K S+D T S+I+ RL++A + M + + Y++LI F K
Sbjct: 354 MI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVF-------------- 478
K+V + ME+ EM Q G N VT + LI G+ +A VF
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 479 YRMKLKGPF---------------------PDFETYSMLLTCLCKVGRSEEAMKLIFKML 517
Y + L G PD TY++++ +CK G+ E+ +L +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 518 DCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G+ P+ I + T+ G R+G ++ A +L++
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYS 353
KVDDA+ ++G+M+ + P L + ++ + ++ +G + L +YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 354 LIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
+ I CR ++ ALA+ ++ +G E D VT S+++ R+ DA+A +D M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEP---DIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN---- 467
+ G K +T+LI F + +A+ ++++M Q G +P++VT ++ G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 468 --------------VERPI-----------------DAWNVFYRMKLKGPFPDFETYSML 496
+E + DA N+F M KG PD TYS L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
++CLC GR +A +L+ M++ I P+ + F + +EGK
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 1/187 (0%)
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
KV++A+ L G++V + + V ++ A+ + + E ++ + M+ GI ++ Y
Sbjct: 63 KVDDAVDLFGDMVKS-RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+ I F + Q+ A+ ++ +M + GYEP++VT S+L+ GY + +R DA + +M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
G PD T++ L+ L ++ EA+ L+ +M+ G P + + TV GL + G DL
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 544 ARVVLQQ 550
A +L++
Sbjct: 242 ALSLLKK 248
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 157/411 (38%), Gaps = 53/411 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G H+ +A +F M+ +GI+P +Y+ I LC R D ++L +M K
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK--KQVFVGIKVEEDV 118
I F +I +G+ EK+ + P+ F+ S + +++E
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 119 RVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVV 178
+ +L K DC P++ TYS +LI+ + + E
Sbjct: 384 HMFELMISK-DC---FPNVVTYS-----------------TLIKGFCKAKRVEEGMELFR 422
Query: 179 EVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN 238
E+ Q G +Y I +D + + +F +M
Sbjct: 423 EM-------------------SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
T+ I++ + G AM F+ ++ P TY +I +C K KV+D
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC--KAGKVED 521
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL----SYSL 354
+++ + G P+ T + C GS EA +K+ G PL +Y+
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG---PLPNSGTYNT 578
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
+IRA R G E + L E+ + D T G ++ +L GRL+ +
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAG-DASTIG-LVTNMLHDGRLDKSF 627
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 175/421 (41%), Gaps = 79/421 (18%)
Query: 210 SYNLAIKIAVSGKDFKHMR-NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKE 268
+YN+ +++ + + F + ++ EM + N T+ I++ + G T+ A F +
Sbjct: 164 TYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDD 223
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEV 328
+ G SP+R TY LI LC R DDA K++ EM +G+ PD L C++
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRG--SADDARKLFYEMQTSGNYPDSVAHNALLDGFCKL 281
Query: 329 GSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
G ++EA + +K G+ + L YS +I L RA + +A L ++ + D +
Sbjct: 282 GRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML-KKNIKPDIIL 340
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY------------------------ 423
+I L + G++EDAL + +M +GI + Y
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 424 -----------TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY------- 465
T LI + V +A EI E+++SG P+V T +ALI G
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 466 --------MNVERP------------------------IDAWNVFYRMKLKGPFPDFETY 493
M V RP + A+ G PD +Y
Sbjct: 461 EARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSY 520
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
++L+ C+ G + A+KL+ + G+ P ++ + T+ GL+R G+ + A + K D
Sbjct: 521 NVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDD 580
Query: 554 L 554
Sbjct: 581 F 581
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 135/308 (43%), Gaps = 3/308 (0%)
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
E++ V S + ++I Y ++G+ A+ F +K P TY +I+ + R+
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYN-VILRVMMRE 175
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LS 351
A +Y EM+ P+ + L + G +A+K D + G + ++
Sbjct: 176 EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVT 235
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
Y+++I LC+ G ++A L E+ + D V +++ + GR+ +A +
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYP-DSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
++ G L + Y+SLI F+ ++ +A E+ M + +P+++ + LI+G +
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
DA + M KG PD Y+ ++ LC G EE L +M + P +
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 532 FFGLNREG 539
+ R G
Sbjct: 415 ICSMCRNG 422
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 182/434 (41%), Gaps = 25/434 (5%)
Query: 14 AWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVIT 73
A+ ++ M P ++ + + L K RT D K+ D+M I+ + +I+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 74 YLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGI-KVEEDVRVDQLKSEKVDCSL 132
L +G K+ S P+ S + + G K+ V +L
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPD--SVAHNALLDGFCKLGRMVEAFELLRLFEKDGF 299
Query: 133 VLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVE--VLQICNKYG-- 188
VL L+ YS + + R + + L L+K+ P+ ++ ++Q +K G
Sbjct: 300 VL-GLRGYSSL-IDGLFRARRYTQAFELYANMLKKN---IKPDIILYTILIQGLSKAGKI 354
Query: 189 HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI 248
+ L S + + G YN IK + R+L EM + T TI
Sbjct: 355 EDALKLLSSMPSK-GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I R GL A F EI+ G SPS +T+ LI LC K ++ +A + +M
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC--KSGELKEARLLLHKM-E 470
Query: 309 AGHVPDKELIETYLG-----CLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRA 362
G L ++ G + E GS+L+A + G + + SY+++I CRA
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G ++ AL L V+ + S D VT ++I+ L R GR E+A A + + + V
Sbjct: 531 GDIDGALKLL-NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAV 587
Query: 423 YTSLIVHFFKEKQV 436
Y SL+ ++++V
Sbjct: 588 YRSLMTWSCRKRKV 601
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 42/350 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T +IMI R ++A + +I GY P T+ LI LC +GR V +AL++
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC-LEGR-VSEALELVD 166
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAG 363
M+ GH P + + LC G V +A D + + G+ ++Y +++ +C++G
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
+ A+ L + + K LD V II L + G L++A + M+ +G K I +Y
Sbjct: 227 QTALAMELLRK-MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 424 TSLIVH-----------------------------------FFKEKQVGKAMEIIEEMQQ 448
T+LI F KE ++ +A E+ +EM Q
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
G P+ VT ++LI G+ + A ++ M KG P+ T+++L+ CK ++
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRRR 558
++L KM G+V T+ + T+ G GK ++A+ + Q+ ++ RR
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE---MVSRR 452
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 273 GYSPSRSTYKYLIIALC--GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
G+ P+ TY ++ +C G+ ++ KM I V +I+ LC+ GS
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG----LCKDGS 262
Query: 331 VLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
+ A + ++ G+ + Y+ +IR C AG+ ++ L +++ K + D V
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI-KRKITPDVVAFS 321
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
++I +++G+L +A M Q+GI YTSLI F KE Q+ KA +++ M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
G PN+ T + LI GY D +F +M L+G D TY+ L+ C++G+ E A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+L +M+ + P ++++ + GL G+ + A + ++
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 19/371 (5%)
Query: 172 FTPEFVV--EVLQICNKYGHNVLNFFSWVRK--QPGYKHTAESYNLAIKIAVSGKDFKHM 227
F P V VL++ K G L +RK + K A Y++ I +
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAM-ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIA 287
NLF EM + +T +I + G + +++ +P + LI
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID- 325
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
C K K+ +A +++ EMI G PD + + C+ + +A D + G
Sbjct: 326 -CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 348 VPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSL-----DQVTCGSIIHALLRKGRL 401
+ +++++I C+A +++ L L K SL D VT ++I G+L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELF------RKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
E A M + ++ I Y L+ + KA+EI E++++S E ++ + +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
I G N + DAW++F + LKG PD +TY++++ LCK G EA L KM + G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 522 VPSTINFRTVF 532
P+ + +
Sbjct: 559 SPNGCTYNILI 569
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 39/313 (12%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+LF EM R+ ++ + + R ++ ++ K+++ G + + T +I
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
C + RK+ A G++I G+ PD
Sbjct: 118 C--RCRKLSLAFSAMGKIIKLGYEPD---------------------------------- 141
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVG-AEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
+++S +I LC G+V EAL L +V K +L +T ++++ L G++ DA+
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL--ITLNALVNGLCLNGKVSDAVLL 199
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
ID M + G + Y ++ K Q AME++ +M++ + + V S +I G
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
+A+N+F M++KG D Y+ L+ C GR ++ KL+ M+ I P +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 528 FRTVFFGLNREGK 540
F + +EGK
Sbjct: 320 FSALIDCFVKEGK 332
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 130/293 (44%), Gaps = 6/293 (2%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
+++ I V + L EM + + T+T +I + + + A + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
+ G P+ T+ LI C K +DD L+++ +M G V D T + CE+G
Sbjct: 379 VSKGCGPNIRTFNILINGYC--KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 330 SVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
+ A++ + +++ + +SY +++ LC G+ E+AL + E + K LD
Sbjct: 437 KLEVAKELFQEMVSRRVRPDI-VSYKILLDGLCDNGEPEKALEIF-EKIEKSKMELDIGI 494
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
IIH + +++DA ++ +G+K + Y +I K+ + +A + +M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+ G+ PN T + LIR ++ + + +K G D T M++ L
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 71/140 (50%)
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M+ +GI ++ + +I + +++ A + ++ + GYEP+ VT S LI G R
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+A + RM G P T + L+ LC G+ +A+ LI +M++ G P+ + +
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 531 VFFGLNREGKRDLARVVLQQ 550
V + + G+ LA +L++
Sbjct: 218 VLKVMCKSGQTALAMELLRK 237
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/555 (22%), Positives = 233/555 (41%), Gaps = 47/555 (8%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
I ++ +IF+ M G P+ + + + K+ + L EM KI F+
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFSES-------KKQVF-VGIKVEEDVRVDQ 122
+I L +G F + Q S AP + + KK F I++ +D
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL-----LDH 293
Query: 123 LKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIR----------- 171
+KS+ VD + TY+ +H++CR + + L+++ + K I
Sbjct: 294 MKSKGVDADVC-----TYNML-IHDLCRSNRIAKGYLLLRD-MRKRMIHPNEVTYNTLIN 346
Query: 172 -FTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNL 230
F+ E V I ++ + +L+F G ++N I +S +FK +
Sbjct: 347 GFSNEGKV---LIASQLLNEMLSF--------GLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 231 FFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCG 290
F+ M + ++ +++ + ++A + +K +G R TY +I LC
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC- 454
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-P 349
K +D+A+ + EM G PD + C+VG A++ + ++G +
Sbjct: 455 -KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+ YS +I CR G ++EA+ + E + E + D T ++ +L + G++ +A +
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIY-EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M GI + LI + + KA + +EM + G+ P T +L++G
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+A + D Y+ LLT +CK G +A+ L +M+ I+P + +
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 530 TVFFGLNREGKRDLA 544
++ GL R+GK +A
Sbjct: 693 SLISGLCRKGKTVIA 707
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 168/388 (43%), Gaps = 28/388 (7%)
Query: 187 YGHNVLNFFSWVRKQPGYK--HTAESYNLAIKIAVSGKDFKHMRNLFFEMRR-------- 236
+G L F WV KQPG + H + + I V + + R++ E+
Sbjct: 89 HGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFV 148
Query: 237 -----------NNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI 285
N+ P + I+I +Y R G+ ++ F+ + G++PS T ++
Sbjct: 149 FGALMTTYRLCNSNP---SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 205
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
++ + G V EM+ PD + LC GS ++ ++K G
Sbjct: 206 GSVV-KSGEDVS-VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 263
Query: 346 YTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
Y + +Y+ ++ C+ G+ + A+ L + + ++ D T +IH L R R+
Sbjct: 264 YAPTIVTYNTVLHWYCKKGRFKAAIELL-DHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 322
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
+ M+++ I Y +LI F E +V A +++ EM G PN VT +ALI G
Sbjct: 323 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 382
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
+++ +A +FY M+ KG P +Y +LL LCK + A +M G+
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 442
Query: 525 TINFRTVFFGLNREGKRDLARVVLQQKS 552
I + + GL + G D A V+L + S
Sbjct: 443 RITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/543 (22%), Positives = 218/543 (40%), Gaps = 22/543 (4%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+ EA +I+++M +G ++ V + LCKA + + + + M + I F
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK--KQVFVGIKVEEDVRVDQLKS-EK 127
+I N GE V T P F+ K + G + E + LKS
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF--LKSLHA 646
Query: 128 VDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKY 187
V ++ T + +C+ + + SL E +++S + + + + +C K
Sbjct: 647 VPAAVDTVMYNTL----LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK- 701
Query: 188 GHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSG--KDFKHMRNLFFEMRRNNYPVTSE- 244
G V+ K+ + + V G K + ++F + +N T +
Sbjct: 702 GKTVIAIL--FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 245 -TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T MI Y R+G + E+ P+ +TY L+ RK V + +Y
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK--DVSTSFLLY 817
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRA 362
+I G +PDK + + +CE + K + G V +++++I C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G++ A L +V+ + SLD+ TC +++ L R R +++ + M +QGI
Sbjct: 878 GEINWAFDLV-KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y LI + + A + EEM P V SA++R + D + R
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA-DEATLLLRFM 995
Query: 483 LKGPF-PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
LK P +++ L+ CK G EA++L M +CG+ +++ + GL +G
Sbjct: 996 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1055
Query: 542 DLA 544
LA
Sbjct: 1056 ALA 1058
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 11/344 (3%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
YN + + +LF EM + + S T+T +I R G T +A+ KE +
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 271 ADGYS-PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
A G P++ Y + + K + + +M N GH PD + +G
Sbjct: 716 ARGNVLPNKVMYTCFVDGM--FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 330 SVLEARKCTDSLKKIGYTVP----LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQ 385
+ K D L ++G +Y++++ + V + L ++ D+
Sbjct: 774 KI---EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII-LNGILPDK 829
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
+TC S++ + LE L + A +G+++ + + LI ++ A ++++
Sbjct: 830 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 889
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M G + TC A++ R ++ V + M +G P+ Y L+ LC+VG
Sbjct: 890 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
+ A + +M+ I P + + L + GK D A ++L+
Sbjct: 950 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 6/226 (2%)
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
G N A + K + + G S + T ++ L + + ++ + EM G P+
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVL--NRNHRFQESRMVLHEMSKQGISPESR 935
Query: 317 LIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEV 375
+ LC VG + A + + P ++ S ++RAL + GK +EA L +
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 995
Query: 376 VGAE-KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
+ + ++ T +++H + G + +AL M G+KL + Y LI +
Sbjct: 996 LKMKLVPTIASFT--TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
+ A E+ EEM+ G+ N T ALIRG + E ++ +
Sbjct: 1054 DMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 40/361 (11%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
LF EM+ N T + +T ++ +Y ++G A++ F+E+K G SP+ TY LI L
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL- 313
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR---------KCTDS 340
G+ GR VD+A Y +M+ G PD + + L +VG V E +CT +
Sbjct: 314 GKAGR-VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPT 372
Query: 341 LKKIGYTV----------------------------PLSYSLIIRALCRAGKVEEALALA 372
+ + +YS++I C+ +VE+AL L
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 373 GEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
E+ C S+I+AL + R E A +K+ ++ VY +I HF K
Sbjct: 433 EEMDEKGFPPCPAAYC-SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
++ +A+++ EM+ G P+V +AL+ G + +A ++ +M+ G D +
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINS 551
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKS 552
++++L + G A+++ + GI P + + T+ G + A ++++
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Query: 553 D 553
D
Sbjct: 612 D 612
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 175/431 (40%), Gaps = 73/431 (16%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNY-PVTSETWTIMI 250
+ FF W K+ ++H +Y I+ + + M E+ RN Y V+ + ++
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELV 169
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL----------------CG---- 290
GR + + A++ F + K P+ STY +I+ L C
Sbjct: 170 KALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDC 229
Query: 291 ---------------RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
+ GR D A++++ EM + P +++ T LG +VG V +A
Sbjct: 230 FPDTITYSALISSYEKLGRN-DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 336 KCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEA-------------------------L 369
+ +K+ G + + +Y+ +I+ L +AG+V+EA L
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 370 ALAGEV---------VGAEKSSLDQVTCGSIIHALLR-KGRLEDALAKIDAMKQQGIKLT 419
G V +G + + V+ ++I AL K + + + D MK + +
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
Y+ LI + K +V KA+ ++EEM + G+ P +LI +R A +F
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+K Y++++ K G+ EA+ L +M + G P + + G+ + G
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 540 KRDLARVVLQQ 550
+ A +L++
Sbjct: 529 MINEANSLLRK 539
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 215/496 (43%), Gaps = 59/496 (11%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+S+A +F + + KPT +Y I L + + E + +V EM + F
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM-----CNEGDCFPD 232
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPE------KFSESKKQVFVGI-----KVEEDVR 119
ITY + EK+ + +A +L E + +E +GI KVE+ +
Sbjct: 233 TITY---SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 120 V-DQLKSEKVDCSLVLPHLKTYSE--RDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPE- 175
+ +++K + CS P + TY+E + + + R+ + + ++ L TP+
Sbjct: 290 LFEEMK--RAGCS---PTVYTYTELIKGLGKAGRVDEA---YGFYKDMLRDG---LTPDV 338
Query: 176 -FVVEVLQICNKYGH-----NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGK-DFKHMR 228
F+ ++ I K G NV + R P T SYN IK K +
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP----TVVSYNTVIKALFESKAHVSEVS 394
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+ F +M+ ++ + T++I+I Y + A+ +E+ G+ P + Y LI AL
Sbjct: 395 SWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 454
Query: 289 CGRKGRKVDDALKMYGEMI-NAGHVPDKE---LIETYLGCLCEVGSVLEARKCTDSLKKI 344
K ++ + A +++ E+ N G+V + +I+ + C G + EA + +K
Sbjct: 455 G--KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC----GKLSEAVDLFNEMKNQ 508
Query: 345 GYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII-HALLRKGRLE 402
G + +Y+ ++ + +AG + EA +L ++ E + +II + R G
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKM--EENGCRADINSHNIILNGFARTGVPR 566
Query: 403 DALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI 462
A+ + +K GIK Y +L+ F +A ++ EM+ G+E + +T S+++
Sbjct: 567 RAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Query: 463 RGYMNVERPIDAWNVF 478
NV+ D + F
Sbjct: 627 DAVGNVDHEKDDVSSF 642
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 128/576 (22%), Positives = 240/576 (41%), Gaps = 72/576 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
MV + R + A + F+ M +GI PT + YT I ++ L + +M+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 61 IAIRDEVFHWVITYLENKGE-------FAVKEKVQQMHTASKLAPEKFSESKKQVFVGIK 113
I + + ++ G F +++ + AS K + Q +
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYG--KIIYAHCQTCNMER 432
Query: 114 VEEDVRVDQLKSEKVDCSLVLPH--LKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIR 171
E VR +++ E +D + + H + Y+ +++ ++ ++L++
Sbjct: 433 AEALVR--EMEEEGIDAPIAIYHTMMDGYT---------MVADEKKGLVVFKRLKECG-- 479
Query: 172 FTPEFVVE--VLQICNKYGHNVLNF-FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMR 228
FTP V ++ + K G S V K+ G KH ++Y++ I V KD+ +
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 229 NLFF-----------------------------------EMRRNNYPVTSETWTIMIMLY 253
+F EM++ + T+ T+ +I Y
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 254 GRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVP 313
+ G ++ F ++ G P+ T+ LI L + R+++ A+++ EM AG
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK--RQMEKAVEILDEMTLAGVSA 657
Query: 314 DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALA 372
++ + VG +A + L+ G V + +Y +++A C++G+++ ALA+
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 373 GEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
E+ A + +I R+G + +A I MK++G+K IH YTS I K
Sbjct: 718 KEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
+ +A + IEEM+ G +PN+ T + LI+G+ P A + + MK G PD
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 493 YSMLLTCLCKVGRSEEA------MKLIFKMLDCGIV 522
Y LLT L EA M + +M++ G++
Sbjct: 837 YHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLI 872
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 37/321 (11%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
+F ++ + T T+ +I LY ++G + A+ + +K +G + TY +I
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
K + +A ++ +M+ G PD L + C +G++ A + ++K+ +
Sbjct: 531 --KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH--- 585
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
R R T IIH + G + +L D
Sbjct: 586 -------RPTTR-------------------------TFMPIIHGYAKSGDMRRSLEVFD 613
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M++ G T+H + LI +++Q+ KA+EI++EM +G N T + +++GY +V
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
A+ F R++ +G D TY LL CK GR + A+ + +M I ++ +
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 530 TVFFGLNREGKRDLARVVLQQ 550
+ G R G A ++QQ
Sbjct: 734 ILIDGWARRGDVWEAADLIQQ 754
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 39/311 (12%)
Query: 248 IMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI 307
+M+ YGR G + A F+ ++A G +P+ Y LI A GR +D+AL
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA--VGRDMDEALS------ 365
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVE 366
C +K+ G + L +YS+I+ +AG E
Sbjct: 366 -----------------------------CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAE 396
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
A E K+ L+ G II+A + +E A A + M+++GI I +Y ++
Sbjct: 397 AADYWFDEAKRIHKT-LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTM 455
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP 486
+ + K + + + +++ G+ P VVT LI Y V + A V MK +G
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARV 546
+ +TYSM++ K+ A + M+ G+ P I + + G D A
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 547 VLQQKSDLIRR 557
+++ L R
Sbjct: 576 TVKEMQKLRHR 586
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 179/441 (40%), Gaps = 42/441 (9%)
Query: 150 RILSSSMD-WSLIQEKLEKSAIRFTPEFVVEVLQICNKYG--HNVLNFFSWVRKQPGYKH 206
RIL ++ D W + EK + EF + +++ + G H F +R + G
Sbjct: 285 RILDTNGDNWQAVISAFEKISKPSRTEFGL-MVKFYGRRGDMHRARETFERMRAR-GITP 342
Query: 207 TAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCF 266
T+ Y I G+D + +M+ ++ T+++++ + + G A F
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 267 KEIKADGYSPSRSTYKYLIIALCGR-------------KGRKVDDALKMYGEMINA---- 309
E K + + S Y +I A C + +D + +Y M++
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 462
Query: 310 -----GHVPDKELIE--------TYLGCL----CEVGSVLEARKCTDSLKKIGYTVPL-S 351
G V K L E TY GCL +VG + +A + + +K+ G L +
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTY-GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
YS++I + A A+ ++V E D + +II A G ++ A+ + M
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMV-KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
++ + T + +I + K + +++E+ + M++ G P V T + LI G + +
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
A + M L G + TY+ ++ VG + +A + ++ + G+ + +
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 532 FFGLNREGKRDLARVVLQQKS 552
+ G+ A V ++ S
Sbjct: 701 LKACCKSGRMQSALAVTKEMS 721
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 149/393 (37%), Gaps = 49/393 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
M+ G V + A+ +F+ M +G+KP Y I C + ++ + EMQ +
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSES--------KKQVFVGI 112
F +I G+ +V M P + + K+Q+ +
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 113 KVEEDVRVDQLKSEKVDCSLVLPHLKTYSE--RDVHEVCRILSSSMDWSLIQ-EKLEK-- 167
++ +++ + + + + + ++ + + + R+ + +D + E L K
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Query: 168 -------SAIRFTPEFVVEVLQICNKYGHNVLNFFSWVR--------------KQPGYKH 206
SA+ T E + N + +N+L W R K+ G K
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPR-NSFVYNIL-IDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 207 TAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCF 266
+Y I D EM +T+T +I + R L A++C+
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG------EMINAGHVPDKELIET 320
+E+KA G P ++ Y L+ +L R + +A G EM+ AG + D
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSLLSRAS--IAEAYIYSGVMTICKEMVEAGLIVDMGTAVH 880
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYS 353
+ CLC++ + + T++L+K T P +S
Sbjct: 881 WSKCLCKIEA--SGGELTETLQK---TFPPDWS 908
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 158/344 (45%), Gaps = 43/344 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T +IMI + R +A + +I GY P+ T+ LI LC +GR V +AL++
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC-LEGR-VSEALELVD 182
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAG 363
M+ GH PD I T + LC G EA D + + G ++Y ++ +C++G
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 364 KVEEALALAGEVVGAEKS-SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
+ A+ L ++ E++ LD V II L + G L++A + M+ +GI I
Sbjct: 243 QTALAMELLRKM--EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 423 Y-----------------------------------TSLIVHFFKEKQVGKAMEIIEEMQ 447
Y + LI F KE ++ +A E+ +EM
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL-KGPFPDFETYSMLLTCLCKVGRS 506
G P+ +T ++LI G+ E +D N + + KG P+ T+++L+ CK R
Sbjct: 361 HRGIAPDTITYTSLIDGFCK-ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
++ ++L KM G+V T+ + T+ G GK ++A+ + Q+
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 138/281 (49%), Gaps = 8/281 (2%)
Query: 273 GYSPSRSTYKYLIIALC--GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
G P+ TY ++ +C G+ ++ KM I V +I+ LC+ GS
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG----LCKHGS 278
Query: 331 VLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
+ A + ++ G T + +Y+++I C AG+ ++ L +++ K + + VT
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRKINPNVVTFS 337
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
+I + +++G+L +A M +GI YTSLI F KE + KA ++++ M
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
G +PN+ T + LI GY R D +F +M L+G D TY+ L+ C++G+ A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+L +M+ + P+ + ++ + GL G+ + A + ++
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 162/368 (44%), Gaps = 12/368 (3%)
Query: 160 LIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRK--QPGYKHTAESYNLAIKI 217
+++ + +A+ + P VL + K G L +RK + K A Y++ I
Sbjct: 219 MVEYGCQPNAVTYGP-----VLNVMCKSGQTALAM-ELLRKMEERNIKLDAVKYSIIIDG 272
Query: 218 AVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPS 277
+ NLF EM T+ I+I + G + +++ +P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 278 RSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKC 337
T+ LI + K K+ +A +++ EMI+ G PD + + C+ + +A +
Sbjct: 333 VVTFSVLIDSFV--KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 338 TDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALL 396
D + G + +++++I C+A ++++ L L ++ D VT ++I
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFC 449
Query: 397 RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVV 456
G+L A M + + I Y L+ + KA+EI E++++S E ++
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 457 TCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
+ +I G N + DAW++F + LKG P +TY++++ LCK G EA L KM
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 517 LDCGIVPS 524
+ G P
Sbjct: 570 EEDGHAPD 577
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 134/291 (46%), Gaps = 8/291 (2%)
Query: 255 RIGLTNM----AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
R GL ++ A++ F+++ P+ + L A+ K ++ D L + +M G
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIA--KTKQYDLVLALCKQMELKG 118
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEAL 369
+ + + C C + A + K+GY +++S +I LC G+V EAL
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 370 ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVH 429
L +V D +T ++++ L G+ +A+ ID M + G + Y ++
Sbjct: 179 ELVDRMVEMGHKP-DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 430 FFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPD 489
K Q AME++ +M++ + + V S +I G +A+N+F M++KG +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 490 FETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
TY++L+ C GR ++ KL+ M+ I P+ + F + +EGK
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 172/390 (44%), Gaps = 11/390 (2%)
Query: 135 PHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTP-EFVVEVLQICNKYG--HNV 191
P+ TY ++ +C+ +++ L++ K+E+ I+ ++ + + +C K+G N
Sbjct: 226 PNAVTYGPV-LNVMCKSGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLC-KHGSLDNA 282
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM 251
N F+ + + G +YN+ I + + L +M + T++++I
Sbjct: 283 FNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 252 LYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
+ + G A KE+ G +P TY LI C K +D A +M M++ G
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC--KENHLDKANQMVDLMVSKGC 399
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALA 370
P+ + C+ + + + + G ++Y+ +I+ C GK+ A
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 371 LAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF 430
L E+V + K + VT ++ L G E AL + +++ ++L I +Y +I
Sbjct: 460 LFQEMV-SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 431 FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
+V A ++ + G +P V T + +I G +A +F +M+ G PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
TY++L+ G + +++KLI ++ CG
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 8/231 (3%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P+ T+ LI C K ++DD L+++ +M G V D T + CE+G +
Sbjct: 398 GCDPNIRTFNILINGYC--KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 333 EARKCTDSLKKIGYTVP---LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
A++ + + VP ++Y +++ LC G+ E+AL + E + K LD
Sbjct: 456 VAKELFQEM--VSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKIEKSKMELDIGIYN 512
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
IIH + +++DA ++ +G+K + Y +I K+ + +A + +M++
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
G+ P+ T + LIR ++ + + +K G D T M++ L
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 130/269 (48%), Gaps = 13/269 (4%)
Query: 295 KVDDALKMYGEMINAGHVP---DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS 351
K DDA+ ++ +MI++ +P D + + + + VL K + LK I + + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME-LKGIAHNL-YT 125
Query: 352 YSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
S++I CR K+ A + G+++ G E ++ +T ++I+ L +GR+ +AL +D
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNT---ITFSTLINGLCLEGRVSEALELVD 182
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M + G K + +L+ + +AM +I++M + G +PN VT ++
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+ A + +M+ + D YS+++ LCK G + A L +M GI + I +
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 530 TVFFGLNREGKRDLARVVLQQKSDLIRRR 558
+ G G+ D +L+ D+I+R+
Sbjct: 303 ILIGGFCNAGRWDDGAKLLR---DMIKRK 328
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 138/288 (47%), Gaps = 10/288 (3%)
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
G ++A++ K+++ Y +I ALC K V+DAL ++ EM N G P+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK--NVNDALNLFTEMDNKGIRPNVV 291
Query: 317 LIETYLGCLCEVGSVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGE 374
+ + CLC G +A + + +KI V +++S +I A + GK+ EA L E
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV-VTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 375 VVGAEKSSLDQ--VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
++ K S+D T S+I+ RL++A + M + + Y +LI F K
Sbjct: 351 MI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
K+V + ME+ EM Q G N VT + LI+G A +F +M G PD T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
YS+LL LCK G+ E+A+ + + + P + + G+ + GK
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
Y P+ T+ LI L K +A+ + M+ G PD T + LC+ G +
Sbjct: 181 YQPNTVTFNTLIHGLFLHN--KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 334 ARKCTDSLKK--IGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
A ++K I V + Y+ II ALC V +AL L E+ + + VT S+
Sbjct: 239 ALSLLKKMEKGKIEADVVI-YTTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSL 296
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
I L GR DA + M ++ I + +++LI F KE ++ +A ++ +EM +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
+P++ T S+LI G+ +R +A ++F M K FP+ TY+ L+ CK R EE M+
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 512 LIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
L +M G+V +T+ + T+ GL + G D+A+ + ++
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 137/287 (47%), Gaps = 6/287 (2%)
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
A G P TY ++ LC R +D AL + +M D + T + LC +
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRG--DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 331 VLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
V +A + G + +Y+ +IR LC G+ +A L +++ K + + VT
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFS 329
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
++I A +++G+L +A D M ++ I I Y+SLI F ++ +A + E M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
PNVVT + LI+G+ +R + +F M +G + TY+ L+ L + G + A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ--QKSDL 554
K+ KM+ G+ P I + + GL + GK + A VV + QKS +
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 277 SRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK 336
S Y Y I+ C + ++ AL + G+M+ G+ PD + + L C + EA
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 337 CTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHAL 395
D + + Y ++++ +I L K EA+AL +V A D T G++++ L
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGL 230
Query: 396 LRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNV 455
++G ++ AL+ + M++ I+ + +YT++I K V A+ + EM G PNV
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 456 VTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
VT ++LIR N R DA + M + P+ T+S L+ K G+ EA KL +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 516 MLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
M+ I P + ++ G + D A+
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 295 KVDDALKMYGEMINAGHVPD---------------------------KELIETY------ 321
K+DDA+ ++GEM+ + +P + L +Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 322 --LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
+ C C + A + K+GY + + S ++ C ++ EA+AL ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
E + VT ++IH L + +A+A ID M +G + + Y +++ K +
Sbjct: 180 EYQP-NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A+ ++++M++ E +VV + +I N + DA N+F M KG P+ TY+ L+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
CLC GR +A +L+ M++ I P+ + F + +EGK
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 6/333 (1%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
Y I + K+ NLF EM T+ +I G + A ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
+P+ T+ LI A K K+ +A K+Y EMI PD + + C
Sbjct: 318 ERKINPNVVTFSALIDAFV--KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 331 VLEARKCTD-SLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL-DQVTC 388
+ EA+ + + K + ++Y+ +I+ C+A +VEE + L E+ +++ + + VT
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTY 433
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
++I L + G + A M G+ I Y+ L+ K ++ KA+ + E +Q+
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
S EP++ T + +I G + D W++F + LKG P+ Y+ +++ C+ G EE
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
A L +M + G +P++ + T+ R+G +
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 176/400 (44%), Gaps = 15/400 (3%)
Query: 135 PHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQ-ICN-KYGHNVL 192
P L TY V+ +C+ + SL++ K+EK I ++ +CN K ++ L
Sbjct: 218 PDLFTYGTV-VNGLCKRGDIDLALSLLK-KMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 193 NFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML 252
N F+ + + G + +YN I+ + + L +M T++ +I
Sbjct: 276 NLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 253 YGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHV 312
+ + G A + E+ P TY LI C ++D+A M+ MI+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMFELMISKDCF 392
Query: 313 PDKELIETYLGCLCEVGSVLEARKCTDSLKK---IGYTVPLSYSLIIRALCRAGKVEEAL 369
P+ T + C+ V E + + + +G TV +Y+ +I+ L +AG + A
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV--TYNTLIQGLFQAGDCDMAQ 450
Query: 370 ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVH 429
+ ++V ++ D +T ++ L + G+LE AL + +++ ++ I+ Y +I
Sbjct: 451 KIFKKMV-SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 430 FFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPD 489
K +V ++ + G +PNV+ + +I G+ +A +F MK G P+
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 490 FETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV--PSTIN 527
TY+ L+ + G + +LI +M CG V STI+
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 9/237 (3%)
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P+ TY LI C K ++V++ ++++ EM G V + T + L + G A+
Sbjct: 393 PNVVTYNTLIKGFC--KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 336 KCTDSLKKIGYTVP---LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII 392
K + G VP ++YS+++ LC+ GK+E+AL + E + K D T +I
Sbjct: 451 KIFKKMVSDG--VPPDIITYSILLDGLCKYGKLEKALVVF-EYLQKSKMEPDIYTYNIMI 507
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
+ + G++ED ++ +G+K + +YT++I F ++ +A + EM++ G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
PN T + LIR + + + M+ G D T SM++ L GR E++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
K+++A+ L GE+V + + V ++ A+ + + + ++ + M+ I ++ Y
Sbjct: 60 KLDDAVDLFGEMVQS-RPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
LI F + Q+ A+ ++ +M + GYEP++VT S+L+ GY + +R +A + +M +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
P+ T++ L+ L ++ EA+ LI +M+ G P + TV GL + G DL
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 544 ARVVLQQ 550
A +L++
Sbjct: 239 ALSLLKK 245
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 175/396 (44%), Gaps = 72/396 (18%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
++ G+K +YN+ + KD K + +F +M++ + T+TIMI GRIG
Sbjct: 230 RRGGHKLDIFAYNMLLDAL--AKDEKACQ-VFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
+ A+ F E+ +G + + Y L+ L KG+ VD A++++ M+ G P++
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLA--KGKMVDKAIQVFSRMVETGCRPNEYTYS 344
Query: 320 TYL------GCLCEVGSVLEARK----------CTDSLKKIGY------------TVPL- 350
L G L + V+E K +L K+G+ + P+
Sbjct: 345 LLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 351 ----SYSLIIRALCRAGKVEEALALAGEV------------------------------- 375
SY ++ +LC AGK EA+ + ++
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 376 ---VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
+ + S D T +I + R G +++A+ + +++ K I Y SLI K
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
V +A +EMQ+ G P+VVT S L+ + ER A+++F M +KG P+ T
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
Y++LL CL K GR+ EA+ L KM G+ P +I +
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 134/259 (51%), Gaps = 8/259 (3%)
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
+T ++ ++ ++G + A F ++ + R +Y ++ +LCG K +A+
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCG--AGKTIEAI 427
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRAL 359
+M ++ G V D + T L ++ + + +KK G + + +Y+++I +
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 360 CRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIK 417
R G+V+EA+ + E+ E+S D ++ S+I+ L + G +++A + M+++G+
Sbjct: 488 GRVGEVDEAINIFEEL---ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 418 LTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNV 477
+ Y++L+ F K ++V A + EEM G +PN+VT + L+ R +A ++
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Query: 478 FYRMKLKGPFPDFETYSML 496
+ +MK +G PD TY++L
Sbjct: 605 YSKMKQQGLTPDSITYTVL 623
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 174/363 (47%), Gaps = 10/363 (2%)
Query: 193 NFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML 252
+FF V K G + S+N+ I L +M ++ S T+ I+
Sbjct: 243 SFFCTVLK-CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 253 YGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGR-KGRKVDDALKMYGEMINAGH 311
+ +G+ + A +++ G SP TY I LCG+ + +D L + +M++ G
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYT---ILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 312 VPDKEL-IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEAL 369
+ + L LC+ G + EA + +K G + L +YS++I LC+ GK + AL
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 370 ALAGEVVGAEKSSL-DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
L E+ +K L + T G+++ L +KG L +A + +D++ G L I +Y +I
Sbjct: 419 WLYDEM--CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
+ K + +A+E+ + + ++G P+V T ++LI GY + +A + +KL G P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
+Y+ L+ G ++ +L +M GI P+ + + +F GL R K + VL
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 596
Query: 549 QQK 551
+++
Sbjct: 597 RER 599
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 147/351 (41%), Gaps = 53/351 (15%)
Query: 250 IMLYG--RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI 307
+ML G + G + A++ F ++KADG SP Y +I LC K K D AL +Y EM
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC--KLGKFDMALWLYDEMC 425
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVE 366
+ +P+ L LC+ G +LEAR DSL G T+ + Y+++I ++G +E
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
EAL L +VV + T S+I+ + + +A +D +K G+ ++ YT+L
Sbjct: 486 EALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 427 I-----------------------------------------------VHFFKEKQVGKA 439
+ H +E+ K
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ + +M+ G P+ +T + +I+ V+ A+ MK + TY++L+
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
LC G +A I+ + + + S + T+ +G ++A + Q
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQ 715
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 160/373 (42%), Gaps = 29/373 (7%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN-----YPVTSETWTI 248
FF +R ++H++ S L + + FK ++ + ++ + + T W +
Sbjct: 70 FFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDM 129
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
++ L R+ + + ++ K++K + S +Y ++ R+ D +Y E+ +
Sbjct: 130 LLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-----RETDKMWDVYKEIKD 184
Query: 309 AGHVPDKELIETYLGCLCEV----GSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGK 364
++ T + LC +VL R T K IG +V +S++ I+ C+ G
Sbjct: 185 ----KNEHTYSTVVDGLCRQQKLEDAVLFLR--TSEWKDIGPSV-VSFNSIMSGYCKLGF 237
Query: 365 VEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
V+ A + V+ G S +I+ L G + +AL M + G++
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSH---NILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y L F + A E+I +M G P+V+T + L+ G + ID V +
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN-IDMGLVLLKDM 353
Query: 483 LKGPFP--DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
L F S++L+ LCK GR +EA+ L +M G+ P + + V GL + GK
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Query: 541 RDLARVVLQQKSD 553
D+A + + D
Sbjct: 414 FDMALWLYDEMCD 426
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 174/363 (47%), Gaps = 10/363 (2%)
Query: 193 NFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML 252
+FF V K G + S+N+ I L +M ++ S T+ I+
Sbjct: 243 SFFCTVLK-CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 253 YGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGR-KGRKVDDALKMYGEMINAGH 311
+ +G+ + A +++ G SP TY I LCG+ + +D L + +M++ G
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYT---ILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 312 VPDKEL-IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEAL 369
+ + L LC+ G + EA + +K G + L +YS++I LC+ GK + AL
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 370 ALAGEVVGAEKSSL-DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
L E+ +K L + T G+++ L +KG L +A + +D++ G L I +Y +I
Sbjct: 419 WLYDEM--CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
+ K + +A+E+ + + ++G P+V T ++LI GY + +A + +KL G P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
+Y+ L+ G ++ +L +M GI P+ + + +F GL R K + VL
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 596
Query: 549 QQK 551
+++
Sbjct: 597 RER 599
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 147/351 (41%), Gaps = 53/351 (15%)
Query: 250 IMLYG--RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI 307
+ML G + G + A++ F ++KADG SP Y +I LC K K D AL +Y EM
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC--KLGKFDMALWLYDEMC 425
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVE 366
+ +P+ L LC+ G +LEAR DSL G T+ + Y+++I ++G +E
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
EAL L +VV + T S+I+ + + +A +D +K G+ ++ YT+L
Sbjct: 486 EALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 427 I-----------------------------------------------VHFFKEKQVGKA 439
+ H +E+ K
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ + +M+ G P+ +T + +I+ V+ A+ MK + TY++L+
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
LC G +A I+ + + + S + T+ +G ++A + Q
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQ 715
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 160/373 (42%), Gaps = 29/373 (7%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN-----YPVTSETWTI 248
FF +R ++H++ S L + + FK ++ + ++ + + T W +
Sbjct: 70 FFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDM 129
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
++ L R+ + + ++ K++K + S +Y ++ R+ D +Y E+ +
Sbjct: 130 LLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF-----RETDKMWDVYKEIKD 184
Query: 309 AGHVPDKELIETYLGCLCEV----GSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGK 364
++ T + LC +VL R T K IG +V +S++ I+ C+ G
Sbjct: 185 ----KNEHTYSTVVDGLCRQQKLEDAVLFLR--TSEWKDIGPSV-VSFNSIMSGYCKLGF 237
Query: 365 VEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
V+ A + V+ G S +I+ L G + +AL M + G++
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSH---NILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y L F + A E+I +M G P+V+T + L+ G + ID V +
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN-IDMGLVLLKDM 353
Query: 483 LKGPFP--DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
L F S++L+ LCK GR +EA+ L +M G+ P + + V GL + GK
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Query: 541 RDLARVVLQQKSD 553
D+A + + D
Sbjct: 414 FDMALWLYDEMCD 426
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 36/360 (10%)
Query: 226 HMRNLFFEMRRNNYPVTSETWTIMIMLYG--RIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
H+ F+E R + WT ++ + GL ++A F+ +K+DG SP+ +
Sbjct: 84 HIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGF 143
Query: 284 LIIALCGRKGR--------------------------------KVDDALKMYGEMINAGH 311
L+ + KG+ +V+DA+K++ E +
Sbjct: 144 LVSSF-AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS 202
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALA 370
D + + LC VG +A + + G + +Y+ +I+ C++ ++ +A
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 371 LAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF 430
+ +V S D VT S+I + G++ +A + +D M + GI T + L+ +
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 431 FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
K ++ A EI +M G P+VVT ++LI GY V + + ++ M +G FP+
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
TYS+L+ LC R +A +L+ ++ I+P + V G + GK + A V++++
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 5/270 (1%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGY-SPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T+ +I + + N A FK++K+ SP TY +I C K K+ +A +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC--KAGKMREASSLL 300
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRA 362
+M+ G P + + G +L A + + G + ++++ +I CR
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G+V + L E+ A + T +I+AL + RL A + + + I +
Sbjct: 361 GQVSQGFRLWEEM-NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y +I F K +V +A I+EEM++ +P+ +T + LI G+ R +A ++F++M
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
G PD T S LL+CL K G ++EA L
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 191/457 (41%), Gaps = 51/457 (11%)
Query: 26 IKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYLENKGEFAVKE 85
I+ ++ +Y + + LCKA + ++ + M++ ++ + + ++++ KG
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG------ 152
Query: 86 KVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDV 145
++H A+ L + F + V + V++D+++ L HL+ S D
Sbjct: 153 ---KLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAM---KLFDEHLRFQSCNDT 206
Query: 146 HEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYK 205
IL + EK +E+L + + + G +
Sbjct: 207 KTF-NILIRGLCGVGKAEK------------ALELLGVMSGF---------------GCE 238
Query: 206 HTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE---TWTIMIMLYGRIGLTNMA 262
+YN I+ + +F +++ + V S T+T MI Y + G A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS--VCSPDVVTYTSMISGYCKAGKMREA 296
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+ ++ G P+ T+ L+ K ++ A ++ G+MI+ G PD + +
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGY--AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 323 GCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
C VG V + + + + G + +YS++I ALC ++ +A L G++ A K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL--ASKD 412
Query: 382 SLDQ-VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ Q +I + G++ +A ++ M+++ K +T LI+ + ++ +A+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNV 477
I +M G P+ +T S+L+ + +A+++
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 36/360 (10%)
Query: 226 HMRNLFFEMRRNNYPVTSETWTIMIMLYG--RIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
H+ F+E R + WT ++ + GL ++A F+ +K+DG SP+ +
Sbjct: 84 HIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGF 143
Query: 284 LIIALCGRKGR--------------------------------KVDDALKMYGEMINAGH 311
L+ + KG+ +V+DA+K++ E +
Sbjct: 144 LVSSF-AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS 202
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALA 370
D + + LC VG +A + + G + +Y+ +I+ C++ ++ +A
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 371 LAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF 430
+ +V S D VT S+I + G++ +A + +D M + GI T + L+ +
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 431 FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
K ++ A EI +M G P+VVT ++LI GY V + + ++ M +G FP+
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
TYS+L+ LC R +A +L+ ++ I+P + V G + GK + A V++++
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 5/270 (1%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGY-SPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T+ +I + + N A FK++K+ SP TY +I C K K+ +A +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC--KAGKMREASSLL 300
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRA 362
+M+ G P + + G +L A + + G + ++++ +I CR
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G+V + L E+ A + T +I+AL + RL A + + + I +
Sbjct: 361 GQVSQGFRLWEEM-NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y +I F K +V +A I+EEM++ +P+ +T + LI G+ R +A ++F++M
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
G PD T S LL+CL K G ++EA L
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/457 (19%), Positives = 191/457 (41%), Gaps = 51/457 (11%)
Query: 26 IKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYLENKGEFAVKE 85
I+ ++ +Y + + LCKA + ++ + M++ ++ + + ++++ KG
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG------ 152
Query: 86 KVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDV 145
++H A+ L + F + V + V++D+++ L HL+ S D
Sbjct: 153 ---KLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAM---KLFDEHLRFQSCNDT 206
Query: 146 HEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYK 205
IL + EK +E+L + + + G +
Sbjct: 207 KTF-NILIRGLCGVGKAEK------------ALELLGVMSGF---------------GCE 238
Query: 206 HTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE---TWTIMIMLYGRIGLTNMA 262
+YN I+ + +F +++ + V S T+T MI Y + G A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS--VCSPDVVTYTSMISGYCKAGKMREA 296
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+ ++ G P+ T+ L+ K ++ A ++ G+MI+ G PD + +
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGY--AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 323 GCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
C VG V + + + + G + +YS++I ALC ++ +A L G++ A K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL--ASKD 412
Query: 382 SLDQ-VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ Q +I + G++ +A ++ M+++ K +T LI+ + ++ +A+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNV 477
I +M G P+ +T S+L+ + +A+++
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 224/546 (41%), Gaps = 42/546 (7%)
Query: 13 EAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRT-EDILKVLDEMQASKIAIRDEVFHWV 71
+A +F+ M+ G PT +Y V + K R+ IL VLDEM++ + + V
Sbjct: 228 KAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTV 287
Query: 72 ITYLENKGEF-AVKEKVQQMHTASKLAPEKFSESKKQVF--VGIKVEEDVRVDQLKSEKV 128
++ +G KE ++ + + QVF G+ E + +++
Sbjct: 288 LSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSC 347
Query: 129 DCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEK----SAIRFTPEFVVEVLQIC 184
V TY+E V R S +I+ +K +AI +T V++
Sbjct: 348 PADSV-----TYNEL-VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT--VIDAYGKA 399
Query: 185 NKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE 244
K + F+S K+ G +YN + + M + +M+ N
Sbjct: 400 GKEDEALKLFYSM--KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA 457
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
TW M+ L G G+ F+E+K+ G+ P R T+ LI A GR G +V DA KMYG
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY-GRCGSEV-DASKMYG 515
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPLSYSLIIRALCRAG 363
EM AG L L G +K G+ SYSL++
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML------- 568
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHA--LLRKGRLED----ALA----KIDAMKQ 413
+ A G +G E+ +++ G I + LLR L + ALA K+
Sbjct: 569 ---QCYAKGGNYLGIERIE-NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK 624
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
G K + ++ S++ F + +A I+E +++ G P++VT ++L+ Y+
Sbjct: 625 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
A + ++ PD +Y+ ++ C+ G +EA++++ +M + GI P + T
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 534 GLNREG 539
G G
Sbjct: 745 GYTAMG 750
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 7/304 (2%)
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
Y + +T ++ Y R G A++ F+ +K G SP+ TY +I+ + G+ GR
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYN-VILDVFGKMGRSWRK 264
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIR 357
L + EM + G D+ T L G + EA++ LK GY ++Y+ +++
Sbjct: 265 ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 358 ALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQG 415
+AG EAL++ E+ E++S D VT ++ A +R G ++A I+ M ++G
Sbjct: 325 VFGKAGVYTEALSVLKEM---EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 416 IKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAW 475
+ YT++I + K + +A+++ M+++G PN T +A++ R +
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 476 NVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL 535
+ MK G P+ T++ +L G + ++ +M CG P F T+
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 536 NREG 539
R G
Sbjct: 502 GRCG 505
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
T L G +A + +K++G + L +Y++I+ + G+ + + + +
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
+ D+ TC +++ A R+G L +A +K G + Y +L+ F K +
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A+ +++EM+++ + VT + L+ Y+ +A V M KG P+ TY+ ++
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK-RDLARVVLQQKSD 553
K G+ +EA+KL + M + G VP+T + V L ++ + ++ +++ KS+
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 157/395 (39%), Gaps = 11/395 (2%)
Query: 161 IQEKLEKSAIRFTPEFVVEVLQICNKYG--HNVLNFFSWVRKQPGYKHTAESYNLAIKIA 218
+ +++ ++F VL C + G FF+ + K GY+ +YN +++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTYNALLQVF 326
Query: 219 VSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR 278
+ ++ EM N+ P S T+ ++ Y R G + A + + G P+
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 279 STYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCT 338
TY +I A G+ G++ D+ALK++ M AG VP+ L L + E K
Sbjct: 387 ITYTTVIDAY-GKAGKE-DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 339 DSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRK 398
+K G + + + ALC +++ + + + D+ T ++I A R
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504
Query: 399 GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTC 458
G DA M + G + Y +L+ ++ +I +M+ G++P +
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Query: 459 SALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK---VGRSEEAMKLIFK 515
S +++ Y + + R+K FP + LL K + SE A L K
Sbjct: 565 SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK 624
Query: 516 MLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G P + F ++ R D A +L+
Sbjct: 625 H---GYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 123/292 (42%), Gaps = 14/292 (4%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
+ G+ +YN + D++ N+ +M+ + T ++++M+ Y + G
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
IK PS + L++A K R + + + + G+ PD + +
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLA--NFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG---KVEEALALAGEVV 376
L +A +S+++ G + L +Y+ ++ R G K EE L
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL---- 692
Query: 377 GAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
EKS L D V+ ++I R+G +++A+ + M ++GI+ I Y + + +
Sbjct: 693 --EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP 486
+ ++IE M ++ PN +T ++ GY + +A + ++K P
Sbjct: 751 MFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 802
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 39/342 (11%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ I+I + R ++A+ ++ GY PS T L+ C G+++ DA+ +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC--HGKRISDAVALVD 179
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+M+ G+ PD T + L EA D + + G L +Y +++ LC+ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
+ AL L ++ A K D V +II +L + ++DAL M+ +GI+ + Y
Sbjct: 240 DTDLALNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 424 TSLIV-----------------------------------HFFKEKQVGKAMEIIEEMQQ 448
+SLI F KE + +A ++ ++M +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
+P++ T ++L+ G+ +R A +F M K FPD TY+ L+ CK R E+
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+L +M G+V T+ + T+ GL +G D A+ V +Q
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 47/309 (15%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G + S + Y I G K+DDA+ ++G M+ + +P L + ++
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 333 EARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCG 389
+ ++++ L +Y+++I CR ++ ALAL G++ +G E S VT
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI---VTLS 159
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
S+++ R+ DA+A +D M + G + +T+LI F + +A+ +++ M Q
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 450 GYEPNVVTCSALIRG--------------------------------------YMNVERP 471
G +PN+VT ++ G Y +V+
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD-- 277
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
DA N+F M+ KG P+ TYS L++CLC GR +A +L+ M++ I P+ + F +
Sbjct: 278 -DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 532 FFGLNREGK 540
+EGK
Sbjct: 337 IDAFVKEGK 345
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P+ TY ++ LC R D AL + +M A D + T + LC+ V
Sbjct: 220 GCQPNLVTYGVVVNGLCKRG--DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 333 EARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
+A ++ G + +YS +I LC G+ +A L +++ +K + + VT ++
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNAL 336
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
I A +++G+ +A D M ++ I I Y SL+ F ++ KA ++ E M
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
P+VVT + LI+G+ +R D +F M +G D TY+ L+ L G + A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 512 LIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ--QKSDL 554
+ +M+ G+ P + + + GL GK + A V QKS++
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 209/530 (39%), Gaps = 56/530 (10%)
Query: 8 RNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEV 67
R+ IS A + M G +P+ + + + C R D + ++D+M
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 68 FHWVI--TYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKS 125
F +I +L NK AV VD++
Sbjct: 193 FTTLIHGLFLHNKASEAV----------------------------------ALVDRMVQ 218
Query: 126 EKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICN 185
P+L TY V+ +C+ + + +L+ K+E + I ++
Sbjct: 219 RGCQ-----PNLVTYGVV-VNGLCKRGDTDLALNLLN-KMEAAKIEADVVIFNTIIDSLC 271
Query: 186 KYGH--NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS 243
KY H + LN F + + G + +Y+ I S + L +M
Sbjct: 272 KYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T+ +I + + G A + ++ P TY L+ C ++D A +M+
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD--RLDKAKQMF 388
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK---IGYTVPLSYSLIIRALC 360
M++ PD T + C+ V + + + +G TV +Y+ +I+ L
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV--TYTTLIQGLF 446
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
G + A + ++V ++ D +T ++ L G+LE AL D M++ IKL I
Sbjct: 447 HDGDCDNAQKVFKQMV-SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
++YT++I K +V ++ + G +PNVVT + +I G + +A+ + +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV--PSTINF 528
MK GP P+ TY+ L+ + G + +LI +M C V STI
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 615
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 137/316 (43%), Gaps = 39/316 (12%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+N FKE++ G P+ TY LI LC GR DA ++ +MI P+
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSY-GR-WSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ + G +EA K D + K + +Y+ ++ C ++++A + E + ++
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKD 395
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
D VT ++I + R+ED M +G+ YT+LI F + A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMN---VERPI------------------------- 472
++ ++M G P+++T S L+ G N +E+ +
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 473 -------DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
D W++F + LKG P+ TY+ +++ LC +EA L+ KM + G +P++
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 526 INFRTVFFGLNREGKR 541
+ T+ R+G +
Sbjct: 576 GTYNTLIRAHLRDGDK 591
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
Y I+R K+++A+ L G +V + V ++ A+ + + + ++ +
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLP-SIVEFNKLLSAIAKMKKFDVVISLGEK 110
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M++ I ++ Y LI F + Q+ A+ ++ +M + GYEP++VT S+L+ GY + +R
Sbjct: 111 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
DA + +M G PD T++ L+ L ++ EA+ L+ +M+ G P+ + +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 531 VFFGLNREGKRDLARVVLQQ 550
V GL + G DLA +L +
Sbjct: 231 VVNGLCKRGDTDLALNLLNK 250
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
GY P+ T+ LI L K +A+ + M+ G PD + LC+ G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHN--KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 333 EARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTC 388
A + +++ G P L Y+ II LC+ +++AL L E+ E + + VT
Sbjct: 239 LAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM---ETKGIRPNVVTY 294
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
S+I L GR DA + M ++ I + +++LI F KE ++ +A ++ +EM +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
+P++VT S+LI G+ +R +A +F M K FPD TY+ L+ CK R EE
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
M++ +M G+V +T+ + + GL + G D+A+ + ++
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 133/290 (45%), Gaps = 4/290 (1%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+N FKE++ G P+ TY LI LC GR DA ++ +MI PD
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNY-GR-WSDASRLLSDMIERKINPDVFTFSAL 332
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ + G ++EA K D + K + +YS +I C +++EA + E + ++
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF-EFMVSKH 391
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
D VT ++I + R+E+ + M Q+G+ Y LI F+ A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
EI +EM G PN++T + L+ G + A VF ++ P TY++++ +
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
CK G+ E+ L + G+ P + + T+ G R+G ++ A + ++
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 12/293 (4%)
Query: 255 RIGLTNM----AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
R GL+ + A+ F E+ PS + L+ A+ K K D + + +M N G
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA--KMNKFDVVISLGEQMQNLG 111
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEAL 369
+ + C C + A + K+GY + + S ++ C + ++ EA+
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 370 ALAGE--VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
AL + V G + ++ VT ++IH L + +A+A ID M +G + + Y ++
Sbjct: 172 ALVDQMFVTGYQPNT---VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
K A ++ +M+Q EP V+ + +I G + DA N+F M+ KG
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
P+ TYS L++CLC GR +A +L+ M++ I P F + +EGK
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 37/305 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +++ + G T++A N +++ P Y +I LC K + +DDAL ++
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC--KYKHMDDALNLFK 280
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGK 364
EM G P+ ++YS +I LC G+
Sbjct: 281 EMETKGIRPN----------------------------------VVTYSSLISCLCNYGR 306
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
+A L +++ K + D T ++I A +++G+L +A D M ++ I +I Y+
Sbjct: 307 WSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
SLI F ++ +A ++ E M P+VVT + LI+G+ +R + VF M +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
G + TY++L+ L + G + A ++ +M+ G+ P+ + + T+ GL + GK + A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 545 RVVLQ 549
VV +
Sbjct: 486 MVVFE 490
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 171/425 (40%), Gaps = 58/425 (13%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+V G R A+ + ME ++P Y I LCK +D L + EM+
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKK-QVFV--GIKVEED 117
I + +I+ L N G ++ ++ K+ P+ F+ S FV G VE +
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 118 VRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFV 177
D++ +D P + TY SS ++ + ++L+++ F EF+
Sbjct: 347 KLYDEMVKRSID-----PSIVTY------------SSLINGFCMHDRLDEAKQMF--EFM 387
Query: 178 VEVLQICNKYGHNVLNFFSWVRKQPGYKH---TAESYNLAIKIAVSGKDFKHMRNLFFEM 234
V KH +YN IK K + +F EM
Sbjct: 388 VS-------------------------KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
+ + T+ I+I + G +MA FKE+ +DG P+ TY L+ LC K
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC--KNG 480
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK--CTDSLKKIGYTVPLSY 352
K++ A+ ++ + + P + +C+ G V + C SLK + V ++Y
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV-VAY 539
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC-GSIIHALLRKGRLEDALAKIDAM 411
+ +I CR G EEA AL E+ E +L C ++I A LR G E + I M
Sbjct: 540 NTMISGFCRKGSKEEADALFKEM--KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 412 KQQGI 416
+ G
Sbjct: 598 RSCGF 602
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 223/528 (42%), Gaps = 35/528 (6%)
Query: 19 KSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVF---HWVITYL 75
+ M+ GI +Y++ I C+ S+ L VL +M K+ + + Y
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM--KLGYEPNIVTLSSLLNGYC 162
Query: 76 ENKGEFAVKEKVQQMH-TASKLAPEKFSESKKQVFVGIKVEEDVR-VDQLKSEKVDCSLV 133
+K V QM T + F+ +F+ K E + +D++ ++
Sbjct: 163 HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ---- 218
Query: 134 LPHLKTYSERDVHEVCRILSSSMDWSLI----QEKLEKSAIRFTPEFVVEVLQICNKYGH 189
P L TY V+ +C+ + + ++L+ Q KLE + + ++ KY H
Sbjct: 219 -PDLVTYGVV-VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN-----TIIDGLCKYKH 271
Query: 190 --NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWT 247
+ LN F + + G + +Y+ I + + L +M T++
Sbjct: 272 MDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 248 IMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI 307
+I + + G A + E+ PS TY LI C ++D+A +M+ M+
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD--RLDEAKQMFEFMV 388
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK---IGYTVPLSYSLIIRALCRAGK 364
+ PD T + C+ V E + + + +G TV +Y+++I+ L +AG
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV--TYNILIQGLFQAGD 446
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
+ A + E+V ++ + +T +++ L + G+LE A+ + +++ ++ TI+ Y
Sbjct: 447 CDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
+I K +V ++ + G +P+VV + +I G+ +A +F MK
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV--PSTINFRT 530
G P+ Y+ L+ + G E + +LI +M CG STI T
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 1/187 (0%)
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
K+++A+AL GE+V + + + ++ A+ + + + ++ + M+ GI + Y
Sbjct: 61 KLDDAVALFGEMVKS-RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+ LI F + Q+ A+ ++ +M + GYEPN+VT S+L+ GY + +R +A + +M +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
G P+ T++ L+ L ++ EAM LI +M+ G P + + V GL + G DL
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 544 ARVVLQQ 550
A +L +
Sbjct: 240 AFNLLNK 246
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 161/420 (38%), Gaps = 71/420 (16%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G H+ +A +FK ME +GI+P +Y+ I LC R D ++L +M K
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
I F +I +G+ EK+
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKL--------------------------------Y 349
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
D++ +D P + TY SS ++ + ++L+++ F EF+V
Sbjct: 350 DEMVKRSID-----PSIVTY------------SSLINGFCMHDRLDEAKQMF--EFMVSK 390
Query: 181 LQICNKYGHNVL--NFFSWVR-----------KQPGYKHTAESYNLAIKIAVSGKDFKHM 227
+ +N L F + R Q G +YN+ I+ D
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIA 287
+ +F EM + P T+ ++ + G AM F+ ++ P+ TY +I
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
+C K KV+D ++ + G PD T + C GS EA +K+ G T
Sbjct: 511 MC--KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG-T 567
Query: 348 VPLS--YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
+P S Y+ +IRA R G E + L E+ + D T G ++ +L GRL+ +
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG-DASTIG-LVTNMLHDGRLDKSF 625
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ IMI R + A+ ++ GY PS T L+ C G ++ +A+ +
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC--HGNRISEAVALVD 159
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEA---------RKCTDSLKKIGYTVP------ 349
+M+ G+ PD T + L + EA + C L G +
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 350 ---------------------LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
+ YS +I +LC+ V++AL L E+ + D T
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTY 278
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
S+I L GR DA + M ++ I + + SLI F KE ++ +A ++ +EM Q
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
+PN+VT ++LI G+ +R +A +F M K PD TY+ L+ CK + +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
M+L M G+V +T+ + T+ G + D A++V +Q
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 139/313 (44%), Gaps = 49/313 (15%)
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
F + DGY S L + K+D+A+ ++GEM+ + P L +
Sbjct: 24 FSGLSYDGYREKLSRNALLHL--------KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAI 75
Query: 326 CEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEV--VGAEKSS 382
++ + ++ +G + L +Y+++I LCR ++ ALA+ G++ +G S
Sbjct: 76 AKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSI 135
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
VT S+++ R+ +A+A +D M + G + +T+L+ F+ + +A+ +
Sbjct: 136 ---VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPI------------------------------ 472
+E M G +P++VT A+I G P
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 473 -----DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
DA N+F M KG PD TYS L++CLC GR +A +L+ ML+ I P+ +
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 528 FRTVFFGLNREGK 540
F ++ +EGK
Sbjct: 313 FNSLIDAFAKEGK 325
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/527 (21%), Positives = 208/527 (39%), Gaps = 52/527 (9%)
Query: 21 MEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQ----ASKIAIRDEVFHWVITYLE 76
ME G+ +Y + I LC+ S+ L +L +M I + + +
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH--G 148
Query: 77 NKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPH 136
N+ AV Q + + F+ +F K E V + E++ P
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL----VERMVVKGCQPD 204
Query: 137 LKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH--NVLNF 194
L TY ++ +C+ + +L+ K+EK I V+ KY H + LN
Sbjct: 205 LVTYGAV-INGLCKRGEPDLALNLLN-KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 195 FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
F+ + + G + +Y+ I + + L +M T+ +I +
Sbjct: 263 FTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
+ G A F E+ P+ TY LI C ++D+A +++ M++ +PD
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD--RLDEAQQIFTLMVSKDCLPD 379
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGE 374
T + C+ A+K D ++ + R + R G
Sbjct: 380 VVTYNTLINGFCK------AKKVVDGME------------LFRDMSRRG----------- 410
Query: 375 VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
+VG + VT ++IH + ++A M G+ I Y +L+ K
Sbjct: 411 LVG------NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
++ KAM + E +Q+S EP++ T + + G + D W++F + LKG PD Y+
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
+++ CK G EEA L KM + G +P + + T+ R+G +
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
K++EA+ L GE+V + + V ++ A+ + + + ++ + M+ G+ ++ Y
Sbjct: 45 KLDEAVDLFGEMVKS-RPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+I + Q+ A+ I+ +M + GY P++VT ++L+ G+ + R +A + +M
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
G PD T++ L+ L + ++ EA+ L+ +M+ G P + + V GL + G+ DL
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 544 ARVVLQQ 550
A +L +
Sbjct: 224 ALNLLNK 230
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
M F+++ G + TY LI + D+A ++ +M++ G P+ T
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGF--FQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
L LC+ G + +A + L+K + +Y+++ +C+AGKVE+ L + +
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKG 515
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
D + ++I +KG E+A MK+ G Y +LI ++ +
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 441 EIIEEMQQSGYEPNVVT 457
E+I+EM+ + + T
Sbjct: 576 ELIKEMRSCRFAGDAST 592
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 135/288 (46%), Gaps = 8/288 (2%)
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
K + S Y + I+ C + ++ AL + G+M+ G P + + L C+
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163
Query: 330 SVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQ 385
EA DS+ G+ VP + Y+ +I LC+ + AL + EK + D
Sbjct: 164 RFQEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLNNALEV---FYCMEKKGIRADA 219
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
VT ++I L GR DA + M ++ I + +T+LI F KE + +A + +E
Sbjct: 220 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 279
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M + PNV T ++LI G+ DA +F M KG FPD TY+ L+T CK R
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
E+ MKL +M G+V + T+ G + GK ++A+ V + D
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 10/315 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
++TI+I + R ++A+ ++ G+ PS T L+ C +G + +A+ +
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC--QGNRFQEAVSLVD 173
Query: 305 EMINAGHVPDKELIETYLGCLC---EVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCR 361
M G VP+ + T + LC ++ + LE C + KK ++Y+ +I L
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME--KKGIRADAVTYNTLISGLSN 231
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
+G+ +A L ++V K + + ++I +++G L +A M ++ + +
Sbjct: 232 SGRWTDAARLLRDMV-KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
Y SLI F +G A + + M G P+VVT + LI G+ +R D +F M
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
+G D TY+ L+ C+ G+ A K+ +M+DCG+ P + + + L GK
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 542 DLARVVLQ--QKSDL 554
+ A V+++ QKS++
Sbjct: 411 EKALVMVEDLQKSEM 425
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 4/323 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G+ YN I +D + +F+ M + + T+ +I G A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+++ P+ + LI K + +A +Y EMI VP+ + +
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFV--KEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 323 GCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
C G + +A+ D + G + ++Y+ +I C++ +VE+ + L E+ +
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT-YQGL 355
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
D T ++IH + G+L A + M G+ I Y L+ ++ KA+
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
++E++Q+S + +++T + +I+G ++ +AW +F + KG PD Y +++ LC
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 502 KVGRSEEAMKLIFKMLDCGIVPS 524
+ G EA KL +M + G +PS
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPS 498
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 6/270 (2%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G+ P+ Y +I LC K R +++AL+++ M G D T + L G
Sbjct: 179 GFVPNVVIYNTVINGLC--KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 333 EA-RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-TCGS 390
+A R D +K+ + ++ +I + G + EA L E++ +S + V T S
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI--RRSVVPNVFTYNS 294
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I+ G L DA D M +G + Y +LI F K K+V M++ EM G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+ T + LI GY + A VF RM G PD TY++LL CLC G+ E+A+
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
++ + + I + + GL R K
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M+ GI ++ +T LI F + ++ A+ ++ +M + G+ P++VT +L+ G+ R
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+A ++ M G P+ Y+ ++ LCK A+++ + M GI + + T
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 531 VFFGLNREGK-RDLARVVLQQKSDLIRRR 558
+ GL+ G+ D AR++ D+++R+
Sbjct: 225 LISGLSNSGRWTDAARLL----RDMVKRK 249
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 10/300 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +++ + G ++A N +++A + Y +I +LC K R DDAL ++
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC--KYRHEDDALNLFT 284
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRA 362
EM N G P+ + + CLC +A + + +KI V ++++ +I A +
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV-VTFNALIDAFVKE 343
Query: 363 GKVEEALALAGEVVGAEKSSLDQ--VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
GK+ EA L E++ K S+D T S+I+ RL++A + M + +
Sbjct: 344 GKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
Y +LI F K K++ + +E+ EM Q G N VT + LI G+ +A VF +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
M G P+ TY+ LL LCK G+ E+AM + + + P+ + + G+ + GK
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 165/365 (45%), Gaps = 39/365 (10%)
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
K F + +L +M+R T+ I+I + R ++A+ ++ GY PS T
Sbjct: 99 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 282 KYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
L+ C G+++ DA+ + +M+ G+ PD T + L EA D +
Sbjct: 159 SSLLNGYC--HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 342 KKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR 400
+ G L +Y +++ LC+ G ++ A L ++ A K + V ++I +L +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA-KIEANVVIYSTVIDSLCKYRH 275
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIV-------------------------------- 428
+DAL M+ +G++ + Y+SLI
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 429 ---HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKG 485
F KE ++ +A ++ +EM + +P++ T S+LI G+ +R +A ++F M K
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 486 PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
FP+ TY+ L+ CK R +E ++L +M G+V +T+ + T+ G + D A+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 546 VVLQQ 550
+V +Q
Sbjct: 456 MVFKQ 460
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 139/306 (45%), Gaps = 41/306 (13%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G + S + Y I G K+DDA+ ++G M+ + +P L + ++
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 333 EARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCG 389
+ ++++G + L +Y+++I CR ++ ALAL G++ +G E S VT
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI---VTLS 159
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
S+++ R+ DA+A +D M + G + +T+LI F + +A+ +++ M Q
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 450 GYEPNVVTCSALIRG----------------------------YMNVERPI-------DA 474
G +PN+VT ++ G Y V + DA
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
N+F M+ KG P+ TYS L++CLC R +A +L+ M++ I P+ + F +
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 535 LNREGK 540
+EGK
Sbjct: 340 FVKEGK 345
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 137/290 (47%), Gaps = 4/290 (1%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+N F E++ G P+ TY LI LC + + DA ++ +MI P+
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYE--RWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ + G ++EA K D + K + +YS +I C +++EA + E++ ++
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKD 395
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ VT ++I+ + R+++ + M Q+G+ YT+LI FF+ + A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+ ++M G PN++T + L+ G + A VF ++ P TY++++ +
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
CK G+ E+ L + G+ P I + T+ G R+G ++ A + ++
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEK-SSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
Y I+R + K+++A+ L G +V + S+ + ++ A+ + + + ++ +
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFN--KLLSAIAKMKKFDLVISLGEK 110
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M++ GI ++ Y LI F + Q+ A+ ++ +M + GYEP++VT S+L+ GY + +R
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
DA + +M G PD T++ L+ L ++ EA+ L+ +M+ G P+ + +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 531 VFFGLNREGKRDLARVVLQQ 550
V GL + G DLA +L +
Sbjct: 231 VVNGLCKRGDIDLAFNLLNK 250
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/492 (19%), Positives = 192/492 (39%), Gaps = 54/492 (10%)
Query: 8 RNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEV 67
R+ IS A + M G +P+ + + + C R D + ++D+M
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 68 FHWVI--TYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKS 125
F +I +L NK AV VD++
Sbjct: 193 FTTLIHGLFLHNKASEAV----------------------------------ALVDRMVQ 218
Query: 126 EKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICN 185
P+L TY V+ +C+ + ++L+ K+E + I V+
Sbjct: 219 RGCQ-----PNLVTYGVV-VNGLCKRGDIDLAFNLLN-KMEAAKIEANVVIYSTVIDSLC 271
Query: 186 KYGH--NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS 243
KY H + LN F+ + + G + +Y+ I + + + L +M
Sbjct: 272 KYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
T+ +I + + G A + E+ P TY LI C ++D+A M+
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMF 388
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK---IGYTVPLSYSLIIRALC 360
MI+ P+ T + C+ + E + + + +G TV +Y+ +I
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV--TYTTLIHGFF 446
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
+A + A + ++V ++ + +T +++ L + G+LE A+ + +++ ++ TI
Sbjct: 447 QARDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
+ Y +I K +V ++ + G +P+V+ + +I G+ +A +F +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 481 MKLKGPFPDFET 492
M+ GP PD T
Sbjct: 566 MREDGPLPDSGT 577
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 3/293 (1%)
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
G ++A+N +++ Y +I LC K + +DDA ++ +M G PD
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC--KYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 317 LIETYLGCLCEVGSVLEA-RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEV 375
+ CLC G +A R +D L+K + ++ +I A + GK+ EA L E+
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 376 VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
V ++ D V ++I + R+E+ + M Q+G+ YT+LI FF+ +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 436 VGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSM 495
A + ++M G P+++T + L+ G N A VF M+ + D TY+
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 496 LLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
++ LCK G+ E+ L + G+ P+ + + T+ G R+G ++ A +
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYS 353
K+DDA+ ++G+M+ + P L + ++ + ++ +G + L +YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 354 LIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
+ I CR ++ ALA+ G++ +G S VT S+++ R+ +A+A +D M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSI---VTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+ G + +T+L+ F+ + +A+ ++E M G +P++VT A+I G P
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 472 I-----------------------------------DAWNVFYRMKLKGPFPDFETYSML 496
DA+++F +M+ KG PD TY+ L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
++CLC GR +A +L+ ML+ I P + F + +EGK
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 40/315 (12%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G S + TY I C R ++ AL + G+M+ G+ P + + L C +
Sbjct: 105 GISHNLYTYSIFINYFCRRS--QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 333 EARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
EA D + ++GY ++++ ++ L + K EA+AL +V + D VT G++
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTYGAV 221
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
I+ L ++G + AL ++ M++ I+ + +Y ++I K K + A ++ +M+ G
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 452 EPNVVTCSALIRGYMN--------------VERPIDAWNVFYR----------------- 480
+P+V T + LI N +E+ I+ VF+
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 481 -----MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL 535
+K K FPD Y+ L+ CK R EE M++ +M G+V +T+ + T+ G
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 536 NREGKRDLARVVLQQ 550
+ D A++V +Q
Sbjct: 402 FQARDCDNAQMVFKQ 416
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 127/306 (41%), Gaps = 38/306 (12%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A + F +++ G P TY LI LC GR DA ++ +M+ PD
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLC-NYGR-WSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEAL---------A 370
+ + G ++EA K D + K + P ++Y+ +I+ C+ +VEE +
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 371 LAGEVVG-------------------------AEKSSLDQVTCGSIIHALLRKGRLEDAL 405
L G V ++ D +T ++ L G +E AL
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+ M+++ +KL I YT++I K +V ++ + G +PNVVT + ++ G+
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
+A +F MK GP P+ TY+ L+ + G + +LI +M CG
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 526 INFRTV 531
F V
Sbjct: 567 STFGLV 572
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
K+++A+ L G++V + + V ++ A+ + + + ++ + M+ GI ++ Y
Sbjct: 55 KLDDAIGLFGDMVKS-RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 113
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+ I +F + Q+ A+ I+ +M + GY P++VT ++L+ G+ + R +A + +M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
G PD T++ L+ L + ++ EA+ L+ +M+ G P + + V GL + G+ DL
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 544 ARVVLQQ 550
A +L +
Sbjct: 234 ALNLLNK 240
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 204/505 (40%), Gaps = 33/505 (6%)
Query: 19 KSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQ----ASKIAIRDEVFHWVITY 74
+ M+ GI +Y++FI C+ S+ L +L +M I + + +
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCH- 157
Query: 75 LENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVL 134
N+ AV Q + + F+ +F K E V + E++
Sbjct: 158 -GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL----VERMVVKGCQ 212
Query: 135 PHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH--NVL 192
P L TY ++ +C+ + +L+ K+EK I ++ KY H +
Sbjct: 213 PDLVTYGAV-INGLCKRGEPDLALNLLN-KMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 193 NFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML 252
+ F+ + + G K +YN I + + L +M N + +I
Sbjct: 271 DLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 253 YGRIGLTNMAMNCFKE-IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
+ + G A + E +K+ P Y LI C K ++V++ ++++ EM G
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC--KYKRVEEGMEVFREMSQRGL 387
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-------LSYSLIIRALCRAGK 364
V + T + +AR C ++ V ++Y++++ LC G
Sbjct: 388 VGNTVTYTTL------IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
VE AL + E + LD VT ++I AL + G++ED ++ +G+K + YT
Sbjct: 442 VETALVVF-EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
+++ F ++ +A + EM++ G PN T + LIR + + + M+
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEA 509
G D T+ L+T + GR +++
Sbjct: 561 GFAGDASTFG-LVTNMLHDGRLDKS 584
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 170/409 (41%), Gaps = 56/409 (13%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN-----YPVTSETWTI 248
FF W + G+KH+ ESY + I + + ++ EM + + V T +
Sbjct: 128 FFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNV 187
Query: 249 MIMLYG----------RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
+ +G +G+ A+ CF ++K P + L+ K K DD
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRF--AKLGKTDD 245
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--------- 349
+ + +MI AG P + C+C+ G V AR + +K G VP
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG-LVPDTVTYNSMI 304
Query: 350 ----------------------------LSYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
++Y+ +I C+ GK+ L E+ G
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
+ V+ +++ A ++G ++ A+ M++ G+ + YTSLI K + A
Sbjct: 365 P-NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ EM Q G E NVVT +ALI G + ER +A +F +M G P+ +Y+ L+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
K + A++L+ ++ GI P + + T +GL K + A+VV+ +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 156/340 (45%), Gaps = 9/340 (2%)
Query: 195 FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
FS +++ + T L + A GK ++ F +M T T+ IMI
Sbjct: 215 FSKMKRFRVFPKTRSCNGLLHRFAKLGKT-DDVKRFFKDMIGAGARPTVFTYNIMIDCMC 273
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
+ G A F+E+K G P TY +I G+ GR +DD + + EM + PD
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF-GKVGR-LDDTVCFFEEMKDMCCEPD 331
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAG 373
+ C C+ G + + +K G + SYS ++ A C+ G +++A+
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF-- 389
Query: 374 EVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
V + L ++ T S+I A + G L DA + M Q G++ + YT+LI
Sbjct: 390 -YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFE 491
+++ +A E+ +M +G PN+ + +ALI G++ + A + +K +G PD
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 492 TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
Y + LC + + E A ++ +M +CGI +++ + T+
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 174/410 (42%), Gaps = 75/410 (18%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIG----- 257
G + T +YN+ I D + R LF EM+ + T+ MI +G++G
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 258 -----------------LTNMAMNCF-------------KEIKADGYSPSRSTYKYLIIA 287
N +NCF +E+K +G P+ +Y L+ A
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-- 345
C K + A+K Y +M G VP++ + + C++G++ +A + + + ++G
Sbjct: 377 FC--KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 346 YTVPLSYSLIIRALCRAGKVEEALALAG--EVVG-----AEKSSL--------------- 383
+ V ++Y+ +I LC A +++EA L G + G A ++L
Sbjct: 435 WNV-VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 384 ------------DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
D + G+ I L ++E A ++ MK+ GIK +YT+L+ +F
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK-GPFPDF 490
K + + +++EM++ E VVT LI G + A + F R+ G +
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
++ ++ LCK + E A L +M+ G+VP + ++ G ++G
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
F ++ G P+ ++Y LI K + +D AL++ E+ G PD L T++ L
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFV--KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 326 CEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLD 384
C + + A+ + +K+ G L Y+ ++ A ++G E L L E+ + +
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD-IEVT 576
Query: 385 QVTCGSIIHALLRKGRLEDALAKIDAMKQQ-GIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
VT +I L + + A+ + + G++ ++T++I K+ QV A +
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
E+M Q G P+ ++L+ G ++A + +M G D Y+ L+ L
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Query: 504 GRSEEAMKLIFKMLDCGIVPSTI 526
+ ++A + +M+ GI P +
Sbjct: 697 NQLQKARSFLEEMIGEGIHPDEV 719
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 194/489 (39%), Gaps = 34/489 (6%)
Query: 16 KIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYL 75
+ FK M G +PT +Y + I +CK E + +EM+ + ++ +I
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 76 ENKGEF----AVKEKVQQMHTASKLAPEK-----FSESKKQVFVGIKVEEDVRVDQLKSE 126
G E+++ M + F + K + +G++ +++ + LK
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK-LPIGLEFYREMKGNGLK-- 364
Query: 127 KVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTP-EFVVEVLQICN 185
P++ +YS V C+ M I+ ++ + P E+ L N
Sbjct: 365 --------PNVVSYSTL-VDAFCK---EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 186 KYGHNVLNFFSWVRK--QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS 243
N+ + F + Q G + +Y I + K LF +M + V
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM--DTAGVIP 470
Query: 244 ETWTIMIMLYGRIGLTNM--AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALK 301
+ +++G + NM A+ E+K G P Y I LC + K++ A
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE--KIEAAKV 528
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALC 360
+ EM G + + T + + G+ E D +K++ V + ++ ++I LC
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
+ V +A+ + + ++I L + ++E A + M Q+G+
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
YTSL+ FK+ V +A+ + ++M + G + +++ ++L+ G + + A +
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 481 MKLKGPFPD 489
M +G PD
Sbjct: 709 MIGEGIHPD 717
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 61/133 (45%)
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
V+ +L + +A++ +M++ P +C+ L+ + + + D F M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
G P TY++++ C+CK G E A L +M G+VP T+ + ++ G + G+
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 542 DLARVVLQQKSDL 554
D ++ D+
Sbjct: 314 DDTVCFFEEMKDM 326
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 179/422 (42%), Gaps = 45/422 (10%)
Query: 144 DVHEVCRILSS-SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQP 202
D+ +VC L+ + ++L K + T V++VL+ + + FF W Q
Sbjct: 101 DIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQT 160
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYP--VTSETWTIMIMLYGRIGLTN 260
GY H+ +YN + + ++F M L EM +N VT +T + ++ + G N
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYN 220
Query: 261 MAMNCFKEIKA-----------------------------------DGYSPSRSTYKYLI 285
A++ F E++ D P T+ LI
Sbjct: 221 KAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILI 280
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
C K RK DDA M M PD +++ C+ G + + +++ G
Sbjct: 281 HGFC--KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 346 YTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
++Y++++ +L ++ +V EAL + E + + D S+IH L + GR +DA
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVY-EKMKEDGCVPDAKFYSSLIHILSKTGRFKDA 397
Query: 405 LAKIDAMKQQGIKLTIHVYTSLI---VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
+ M QG++ + VY ++I +H +++ + ++ +E+ + PNV T + L
Sbjct: 398 AEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPL 457
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
++ + ++ + + M D TY +L+ LC G+ EEA + + G+
Sbjct: 458 LKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM 517
Query: 522 VP 523
VP
Sbjct: 518 VP 519
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 2/207 (0%)
Query: 347 TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
T ++ + ++ AL + +E A + ++ K D T +IH + + +DA A
Sbjct: 237 TDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP--DARTFNILIHGFCKARKFDDARA 294
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
+D MK + YTS + + KE + E++EEM+++G PNVVT + ++
Sbjct: 295 MMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG 354
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
++ +A V+ +MK G PD + YS L+ L K GR ++A ++ M + G+ +
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVL 414
Query: 527 NFRTVFFGLNREGKRDLARVVLQQKSD 553
+ T+ + ++A +L++ D
Sbjct: 415 VYNTMISAALHHSRDEMALRLLKRMED 441
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 141/590 (23%), Positives = 240/590 (40%), Gaps = 76/590 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G + + EA I K + + +KP +Y + LCK E L+++DEM +
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR 327
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK--KQVFVGIKVEEDV 118
+ + ++ L +G+ + + ++P F + + G K E
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA- 386
Query: 119 RVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVV 178
+L +++ + P+ TYS + CR + KL+ +A+ F E V
Sbjct: 387 ---ELLFDRMGKIGLRPNDVTYSIL-IDMFCR-----------RGKLD-TALSFLGEMVD 430
Query: 179 EVLQICNKYGHNVLNF---FSWVRKQPGYKHTAESYNLAIKIAV------------SGKD 223
L++ ++++N F + G+ AE N ++ V GK
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGF--MAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 224 FKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
K +R L+ EM + T+T ++ R GL A+ F E+ P+R TY
Sbjct: 489 NKALR-LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
+I C + + A + EM G VPD + LC G EA+ D L K
Sbjct: 548 MIEGYC--EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 344 IGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLE 402
+ + Y+ ++ CR GK+EEAL++ E+V LD V G +I L+ +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMV-QRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 403 DALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI 462
+ M +G+K +YTS+I K +A I + M G PN VT +A+I
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 463 RG-----YMNVE-------RPIDA------WNVF-----------------YRMKLKGPF 487
G ++N +P+ + + F + LKG
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNR 537
+ TY+ML+ C+ GR EEA +LI +M+ G+ P I + T+ L R
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 4/277 (1%)
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
+SPS + L+ L RK K+++AL + +++ G P+ + + LC+ E
Sbjct: 328 FSPSEAAVSSLVEGL--RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 334 ARKCTDSLKKIGY-TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII 392
A D + KIG ++YS++I CR GK++ AL+ GE+V L S+I
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT-GLKLSVYPYNSLI 444
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
+ + G + A + M + ++ T+ YTSL+ + + ++ KA+ + EM G
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
P++ T + L+ G DA +F M P+ TY++++ C+ G +A +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 513 IFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
+ +M + GIVP T ++R + GL G+ A+V +
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 125/591 (21%), Positives = 234/591 (39%), Gaps = 87/591 (14%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G V H A ++F M GI+P YT I+ LC+ +++ M+A+
Sbjct: 198 LLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG 257
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
+ ++ +I L K ++V+ + +++D+
Sbjct: 258 CDVNIVPYNVLIDGLCKK---------------------------QKVWEAVGIKKDLAG 290
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPE--FVV 178
LK P + TY V+ +C++ + ++ E L +RF+P V
Sbjct: 291 KDLK----------PDVVTYCTL-VYGLCKVQEFEIGLEMMDEML---CLRFSPSEAAVS 336
Query: 179 EVLQICNKYG--HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRR 236
+++ K G LN V G YN I G+ F LF M +
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRV-VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 237 NNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI--------------------------K 270
T++I+I ++ R G + A++ E+
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 271 ADGY---------SPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A+G+ P+ TY L+ C + K++ AL++Y EM G P T
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKG--KINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEK 380
L L G + +A K + + + ++Y+++I C G + +A E+ EK
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM--TEK 571
Query: 381 SSL-DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
+ D + +IH L G+ +A +D + + +L YT L+ F +E ++ +A
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ + +EM Q G + ++V LI G + + + + M +G PD Y+ ++
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
K G +EA + M++ G VP+ + + V GL + G + A V+ +
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 4/288 (1%)
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLC 326
K++ P TY L+ LC K ++ + L+M EM+ P + + + + L
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLC--KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR 343
Query: 327 EVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQ 385
+ G + EA + G + L Y+ +I +LC+ K EA L + +G +
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKIGLRPND 402
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
VT +I R+G+L+ AL+ + M G+KL+++ Y SLI K + A + E
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M EP VVT ++L+ GY + + A +++ M KG P T++ LL+ L + G
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
+A+KL +M + + P+ + + + G EG A L++ ++
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 195/462 (42%), Gaps = 56/462 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G+ S+ I++A +++ M +GI P+ ++T + L +A D +K+ +EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK---KQVFVGIKVEED 117
+ ++ +I +G+ + + + T + P+ +S G E
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 118 VRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFV 177
V VD L K +C L + Y+ +H CR + KLE
Sbjct: 598 VFVDGL--HKGNCEL---NEICYTGL-LHGFCR-----------EGKLE----------- 629
Query: 178 VEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN 237
E L +C + Q G Y + I ++ KD K L EM
Sbjct: 630 -EALSVCQEM------------VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 238 NYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVD 297
+T MI + G A + + +G P+ TY +I LC K V+
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC--KAGFVN 734
Query: 298 DALKMYGEMINAGHVPDKELIETYLGCLCEV---GSV--LEARKCTDSLKKIGYTVPLSY 352
+A + +M VP++ TY GC ++ G V +A + +++ K +Y
Sbjct: 735 EAEVLCSKMQPVSSVPNQV---TY-GCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
+++IR CR G++EEA L ++G + S D +T ++I+ L R+ ++ A+ ++M
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIG-DGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
++GI+ Y +LI ++GKA E+ EM + G PN
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-TCGSIIHALLRKGRLEDALAKIDA 410
+ L+I+ R+ +V + + L +++ + S L +V T +++H L++ A+ +
Sbjct: 159 FDLLIQHYVRSRRVLDGV-LVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M GI+ +++YT +I + K + +A E+I M+ +G + N+V + LI G ++
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+A + + K PD TY L+ LCKV E ++++ +ML PS +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 531 VFFGLNREGKRDLARVVLQQKSDL 554
+ GL + GK + A ++++ D
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDF 361
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 143/284 (50%), Gaps = 7/284 (2%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
++A F I G P+ TY LI C R + +AL++ M ++ + + +
Sbjct: 495 DLARIVFSNILEKGLKPNNYTYSILIDG-CFRNHDE-QNALEVVNHMTSSNIEVNGVVYQ 552
Query: 320 TYLGCLCEVGSVLEARKCTDSL---KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVV 376
T + LC+VG +AR+ ++ K++ + +SY+ II + G+++ A+A E+
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSC-MSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 377 GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQV 436
G S + +T S+++ L + R++ AL D MK +G+KL I Y +LI F K +
Sbjct: 612 GNGISP-NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
A + E+ + G P+ ++LI G+ N+ + A +++ +M G D TY+ L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+ L K G A +L +M G+VP I + + GL+++G+
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 126/544 (23%), Positives = 218/544 (40%), Gaps = 60/544 (11%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ GH N + A +F ME +G P +++V I+ K E L+ +M+
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV-- 402
Query: 61 IAIRDEVFHWVITYLEN--KGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDV 118
+ + VFH V T ++ KG Q+ A KL E F VFV
Sbjct: 403 LGLTPSVFH-VHTIIQGWLKG--------QKHEEALKLFDESFETGLANVFV-------- 445
Query: 119 RVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVV 178
C+ +L L + D E +LS K+E I P V
Sbjct: 446 -----------CNTILSWLCKQGKTD--EATELLS----------KMESRGI--GPNVVS 480
Query: 179 E---VLQICNKYGHNVLNF-FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM 234
+L C + ++ FS + ++ G K +Y++ I D ++ + M
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR---STYKYLIIALCGR 291
+N V + +I ++G T+ A +E+ A+ R S Y I
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKA----RELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL- 350
K ++D A+ Y EM G P+ + + LC+ + +A + D +K G + +
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y +I C+ +E A AL E++ E + Q S+I G + AL
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELL-EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M + G++ + YT+LI K+ + A E+ EMQ G P+ + + ++ G +
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+ +F MK P+ Y+ ++ + G +EA +L +MLD GI+P F
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 531 VFFG 534
+ G
Sbjct: 835 LVSG 838
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 175/445 (39%), Gaps = 87/445 (19%)
Query: 177 VVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKD-FKHMRNLFFEMR 235
V++VL L F++W R G + + + I I VS + + +L
Sbjct: 75 VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIR-- 132
Query: 236 RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRK 295
Y TS + +L ++ K+ G+ + + YL+ A K R+
Sbjct: 133 ---YVSTSNPTPMASVLVSKL---------VDSAKSFGFEVNSRAFNYLLNAYS--KDRQ 178
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSL 354
D A+ + +M+ +P + L L + S+ EA++ + IG ++ L
Sbjct: 179 TDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQL 238
Query: 355 IIRALCRAGKVEEALALAGEVV--GAEKSSL----------------------------- 383
++RA R K EAL + + GAE SL
Sbjct: 239 LMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK 298
Query: 384 ----DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
Q T S+I A +++G ++DA+ D M GI + + TSLI K + A
Sbjct: 299 LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPD---------- 489
+ + ++M++ G PN VT S LI + A + +M++ G P
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 490 -----------------FETY-------SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
FET + +L+ LCK G+++EA +L+ KM GI P+
Sbjct: 419 WLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 526 INFRTVFFGLNREGKRDLARVVLQQ 550
+++ V G R+ DLAR+V
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSN 503
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 152/337 (45%), Gaps = 7/337 (2%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS-ETWTIMIMLYGRIGLTNMAMNCFKEI 269
Y+LA++ D +L EM+ V S ET+T +I+ + G + A+ E+
Sbjct: 271 YSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEM 330
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
+DG S + LI C K + AL ++ +M G P+ + + G
Sbjct: 331 LSDGISMNVVAATSLITGHC--KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 330 SVLEARKCTDSLKKIGYTVPLSY-SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
+ +A + ++ +G T + + II+ + K EEAL L E E + C
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF--ETGLANVFVC 446
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
+I+ L ++G+ ++A + M+ +GI + Y ++++ ++K + A + + +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
G +PN T S LI G +A V M + Y ++ LCKVG++ +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 509 AMKLIFKMLDCG-IVPSTINFRTVFFGLNREGKRDLA 544
A +L+ M++ + S +++ ++ G +EG+ D A
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
V+ ++ +I + + G + A+ ++E+ +G SP+ TY L+ LC K ++D AL
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC--KNNRMDQAL 639
Query: 301 KM---------------YGEMINA--------------------GHVPDKELIETYLGCL 325
+M YG +I+ G P + + + +
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 326 CEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEV---VGAEKS 381
+G+++ A + K G L +Y+ +I L + G L LA E+ + A
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN----LILASELYTEMQAVGL 755
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
D++ I++ L +KG+ + + MK+ + + +Y ++I ++E + +A
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
+ +EM G P+ T L+ G + +P+ A
Sbjct: 816 LHDEMLDKGILPDGATFDILVSGQVGNLQPVRA 848
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 7/318 (2%)
Query: 237 NNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKV 296
+N V S ++++ Y + FK GY S + K L+IAL K +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALL--KENRS 204
Query: 297 DDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLI 355
D +Y EMI P+ + LC+ G + +AR + +K G + + SY+ +
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264
Query: 356 IRALCR---AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
I C+ GK+ +A A+ E+V + S + T +I + L ++ M
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENDVSP-NLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
Q +K + Y SLI ++ +A+ + ++M +G +PN++T +ALI G+ +
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
+A ++F +K +G P Y+ML+ CK+G+ ++ L +M GIVP + +
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 533 FGLNREGKRDLARVVLQQ 550
GL R G + A+ + Q
Sbjct: 444 AGLCRNGNIEAAKKLFDQ 461
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 163/333 (48%), Gaps = 21/333 (6%)
Query: 210 SYNLAI----KIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNC 265
SYN I K+ +GK +K + EM N+ T+ I+I + + +M
Sbjct: 260 SYNTLIDGYCKLGGNGKMYK-ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
FKE+ P+ +Y LI LC G K+ +A+ M +M++AG P+ +
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLC--NGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 326 CEVGSVLEARKCTDSLKKIGYTVPLS--YSLIIRALCRAGKVEEALALAGEVVGAEKSSL 383
C+ + EA S+K G VP + Y+++I A C+ GK+++ AL E+ E+ +
Sbjct: 377 CKNDMLKEALDMFGSVKGQG-AVPTTRMYNMLIDAYCKLGKIDDGFALKEEM---EREGI 432
Query: 384 --DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIK--LTIHVYTSLIVHFFKEKQVGKA 439
D T +I L R G +E A D + +G+ +T H+ L+ + ++ + KA
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHI---LMEGYCRKGESRKA 489
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM-KLKGPFPDFETYSMLLT 498
+++EM + G +P +T + +++GY A N+ +M K + + +Y++LL
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ G+ E+A L+ +ML+ G+VP+ I + V
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 6/311 (1%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
++T +I + R ++A++C ++ G+ PS T+ L+ C + +A+ +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC--HVNRFYEAMSLVD 173
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+++ G+ P+ + T + LCE G V A +KK+G + +Y+ +I L +G
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
+ + +++ S D +T ++I ++G+L +A + + M Q+ + I Y
Sbjct: 234 TWGVSARILSDMMRMGISP-DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTY 292
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
SLI + +A +++ + G+ PN VT + LI GY +R D + M
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
G D TY+ L C+ G+ A K++ +M+ CG+ P F + GL GK
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Query: 544 ARVVLQ--QKS 552
A V L+ QKS
Sbjct: 413 ALVRLEDLQKS 423
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 4/284 (1%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
N A+ F ++ PS + L+IA+ + +L + EM+ H D
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISH--DLYSFT 118
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
T + C C + A C + K+G+ + ++ ++ C + EA++L ++VG
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
+ V +II +L KG++ AL + MK+ GI+ + Y SLI F G
Sbjct: 179 GYEP-NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
+ I+ +M + G P+V+T SALI Y + ++A + M + P+ TY+ L+
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
LC G +EA K++ ++ G P+ + + T+ G + + D
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G SP T+ LI + G++G+ ++ A K Y EMI P+ + + LC G +
Sbjct: 249 GISPDVITFSALI-DVYGKEGQLLE-AKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 333 EARKCTDSLKKIGY-TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
EA+K + L G+ ++Y+ +I C+A +V++ + + V+ + D T ++
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC-VMSRDGVDGDTFTYNTL 365
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
+ G+ A + M G+ ++ + L+ ++GKA+ +E++Q+S
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
++T + +I+G ++ DAW +F + LKG PD TY ++ L + EA +
Sbjct: 426 VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHE 485
Query: 512 LIFKM 516
L KM
Sbjct: 486 LYRKM 490
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 350 LSYSLIIRALCRAGKVEEALALAG--EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
+ +S ++ A+ + K E ++L E++G S D + ++I R RL AL+
Sbjct: 80 VDFSRLLIAIAKLNKYEAVISLFRHLEMLGI---SHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
+ M + G + +I + SL+ F + +AM +++++ GYEPNVV + +I
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
+ A +V MK G PD TY+ L+T L G + +++ M+ GI P I
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 528 FRTVFFGLNREGKRDLARVVLQQKSDLIRR 557
F + +EG+ A+ +Q +++I+R
Sbjct: 257 FSALIDVYGKEGQLLEAK---KQYNEMIQR 283
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 169/388 (43%), Gaps = 38/388 (9%)
Query: 172 FTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYN------------------- 212
+TP V + + N L+F W+ + P +KH SY
Sbjct: 25 YTPSHVSSLFSL-NLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKIT 83
Query: 213 -LAIKIAVSGKDFKHMRNLFFEMRRNN-----YPVTSETWTIMIMLYGRIGLTNMAMNCF 266
L IK S +D + + MR+ + Y +T + + ++ R GL +
Sbjct: 84 ILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLY 143
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLC 326
E+ D SP T+ L+ C K V +A + +I AG PD +++ C
Sbjct: 144 TEMLEDLVSPDIYTFNTLVNGYC--KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 327 EVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQ 385
V A K + + G + +SY+ +I L A K++EAL+L ++ + +
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM-KDDNCCPNV 260
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
T +I AL G+ +A+ M + GIK +YT LI F + +A ++E
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 446 MQQSGYEPNVVTCSALIRGYM--NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
M ++G PNV+T +ALI+G+ NV + A + +M + PD TY+ L+ C
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKNVHK---AMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Query: 504 GRSEEAMKLIFKMLDCGIVPSTINFRTV 531
G + A +L+ M + G+VP N RTV
Sbjct: 378 GNLDSAYRLLSLMEESGLVP---NQRTV 402
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 7/298 (2%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGE 305
+ M++ + R+ ++A + F E+ G P+ TY LI K + +A + +
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ--NAWDVINQ 544
Query: 306 MINAGHVPDKELI-ETYLGCLCEVGSVLEARKCTDSL-KKIGYTVP-LSYSLIIRALCRA 362
M NA + E+I T + LC+VG +A++ +L K+ Y++ SY+ II +
Sbjct: 545 M-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G + A+ E+ KS + VT S+I+ + R++ AL MK +KL +
Sbjct: 604 GDTDSAVETYREMSENGKSP-NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y +LI F K+ + A + E+ + G PNV ++LI G+ N+ + A +++ +M
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
G D TY+ ++ L K G A L ++LD GIVP I + GL+++G+
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 8/306 (2%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMR-RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
++LA++ A D +L EMR + P + ET+T +I+ + + G A+ E+
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
G S L+ C KG ++ AL ++ M G PDK + + C+
Sbjct: 337 VGFGIPMSVIAATSLVNGYC--KGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 330 SVLEARKCTDSLK--KIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
+ +A + +K +I + L +++I + +A E AL + + E
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMI-QGCLKAESPEAALEIFND--SFESWIAHGFM 451
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
C I ++G+++ A + + M+Q+GI+ + Y ++++ + K + A I EM
Sbjct: 452 CNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
+ G EPN T S LI G+ + +AW+V +M + Y+ ++ LCKVG++
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 508 EAMKLI 513
+A +++
Sbjct: 572 KAKEML 577
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 138/307 (44%), Gaps = 3/307 (0%)
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+ +L+ + G + A + K ++ G P+ Y +++A C + + +D A ++ EM+
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC--RMKNMDLARSIFSEMLE 512
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEE 367
G P+ + + A + + + + Y+ II LC+ G+ +
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A + ++ ++ S+ + SII ++ G + A+ M + G + +TSLI
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
F K ++ A+E+ EM+ + ++ ALI G+ A+ +F + G
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVV 547
P+ Y+ L++ +G+ + A+ L KM++ GI + T+ GL ++G +LA +
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 548 LQQKSDL 554
+ DL
Sbjct: 753 YSELLDL 759
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/547 (20%), Positives = 224/547 (40%), Gaps = 66/547 (12%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+V G+ N + +A +F ME +G+ P ++V ++ CK E ++ M++ +
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVE----E 116
IA + H +I +G K + A ++ + F F+ K+ +
Sbjct: 411 IAPSSVLVHTMI-----QGCL----KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCK 461
Query: 117 DVRVDQLKS--EKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKS--AIRF 172
+VD S + ++ + P++ Y+ + CR+ + + S+ E LEK F
Sbjct: 462 QGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH-CRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 173 TPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAI----KIAVSGKDFKHMR 228
T +++ NK N + + + ++ YN I K+ + K + ++
Sbjct: 521 TYSILIDGF-FKNKDEQNAWDVINQMNAS-NFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
NL E R Y ++ ++ +I + ++G T+ A+ ++E+ +G SP+ T+ LI
Sbjct: 579 NLIKEKR---YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
C K ++D AL+M EM + ++ +
Sbjct: 636 C--KSNRMDLALEMTHEMKSM---------------------------------ELKLDL 660
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC-GSIIHALLRKGRLEDALAK 407
P +Y +I C+ ++ A L E+ E + V+ S+I G+++ A+
Sbjct: 661 P-AYGALIDGFCKKNDMKTAYTLFSEL--PELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
M GI + YT++I K+ + A ++ E+ G P+ + L+ G
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
+ + A + MK K P+ YS ++ + G EA +L +ML+ GIV
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Query: 528 FRTVFFG 534
F + G
Sbjct: 838 FNLLVSG 844
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 155/368 (42%), Gaps = 55/368 (14%)
Query: 227 MRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLII 286
+ NL +R + +T + ++ Y R + A++CF + P ++
Sbjct: 153 VNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS 212
Query: 287 ALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
+L + +D+A ++Y +M+ G D + + + L RK +++K
Sbjct: 213 SLV--RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR------ASLRERKPEEAVKIFRR 264
Query: 347 TVP-------LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKG 399
+ L +SL ++A C+ + AL L E+ G Q T S+I A +++G
Sbjct: 265 VMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEG 324
Query: 400 RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
+E+A+ +D M GI +++ TSL+ + K ++GKA+++ M++ G P+ V S
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 460 ALIRGY---MNVERPIDAWNVFYRMK------------------LKGPFPD--------- 489
++ + M +E+ I+ + RMK LK P+
Sbjct: 385 VMVEWFCKNMEMEKAIE---FYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDS 441
Query: 490 FETY-------SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
FE++ + + CK G+ + A + M GI P+ + + + R D
Sbjct: 442 FESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMD 501
Query: 543 LARVVLQQ 550
LAR + +
Sbjct: 502 LARSIFSE 509
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 8/283 (2%)
Query: 268 EIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCE 327
+ K+ Y S + ++ LC + K+D AL + +MI +G +P L LC+
Sbjct: 111 QTKSFDYDDCLSIHSSIMRDLCLQG--KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCK 168
Query: 328 VGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV 386
G + +A ++++G + +SY+ +I+ LC V++AL L + ++V
Sbjct: 169 AGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF-NTMNKYGIRPNRV 227
Query: 387 TCGSIIHALLRKGRLEDA----LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
TC I+HAL +KG + + L +I Q L I + T L+ FK V +A+E+
Sbjct: 228 TCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEV 287
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
+EM Q + V + +IRG + + A+ M +G PD TY+ L++ LCK
Sbjct: 288 WKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCK 347
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
G+ +EA L M + G+ P I+++ + GL G + A
Sbjct: 348 EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 14/359 (3%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLY-----G 254
++ G SYN IK S + LF M N Y + T I+++ G
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM--NKYGIRPNRVTCNIIVHALCQKG 240
Query: 255 RIGLTNMAMNCFKEI--KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHV 312
IG N + +EI + +P +++ C + G V AL+++ EM
Sbjct: 241 VIGNNNKKL--LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQ-ALEVWKEMSQKNVP 297
Query: 313 PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALAL 371
D + + LC G+++ A + K G + +Y+ +I ALC+ GK +EA L
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 372 AGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
G + + DQ++ II L G + A + +M + + + ++ +I +
Sbjct: 358 HGTMQNGGVAP-DQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYG 416
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFE 491
+ A+ ++ M G +PNV T +ALI GY+ R IDAW V M+ PD
Sbjct: 417 RYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTT 476
Query: 492 TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
TY++LL C +G A +L +ML G P I + + GL +G+ A +L +
Sbjct: 477 TYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSR 535
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 5/284 (1%)
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
EM + N P S + ++I G A ++ G +P TY LI ALC K
Sbjct: 290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC--K 347
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LS 351
K D+A ++G M N G PD+ + + LC G V A + S+ K L
Sbjct: 348 EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLL 407
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
++++I R G AL++ ++ + + T ++IH ++ GRL DA + M
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLML-SYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+ I Y L+ + A ++ +EM + G +P+++T + L+RG R
Sbjct: 467 RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRL 526
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
A ++ R++ G D + +L ++ R EA L++K
Sbjct: 527 KKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY-LVYK 569
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 178/405 (43%), Gaps = 18/405 (4%)
Query: 144 DVHEVCRILSS-SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQP 202
DV ++ +++ D ++ KLE+ ++ + E VVE+L FF W KQ
Sbjct: 96 DVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQ 155
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRR-NNYPVTSETWTIMIMLYGRIGLTNM 261
GY + Y+ I I + F L EMR+ + V S+T IMI Y +
Sbjct: 156 GYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGK 215
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI--NAGHVP-DKELI 318
A+N F K ++ L+ ALC + + V DA G +I N P D +
Sbjct: 216 AINTFHAYKRFKLEMGIDDFQSLLSALC--RYKNVSDA----GHLIFCNKDKYPFDAKSF 269
Query: 319 ETYLGCLCEV-GSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVV 376
L C V GS EA + + +G +SYS +I + G + + L L + +
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF-DRM 328
Query: 377 GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ-GIKLTIHVYTSLIVHFFKEKQ 435
E D+ +++HAL + + +A + M+++ GI+ + Y SLI K ++
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 436 VGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSM 495
+A ++ +EM + G P + T A +R E + + + +M+ G P ETY M
Sbjct: 389 TEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGE---EVFELLAKMRKMGCEPTVETYIM 445
Query: 496 LLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
L+ LC+ + + L +M + + P ++ + GL GK
Sbjct: 446 LIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGK 490
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 103/275 (37%), Gaps = 54/275 (19%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G KH SY+ I G + LF M++ + + ++ + + A
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 263 MNCFKEIKAD-GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
N K ++ + G P+ TY LI LC K RK ++A +++ EM+ G P I TY
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLC--KARKTEEAKQVFDEMLEKGLFP---TIRTY 411
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ + + E + ++K+G + +Y ++IR LCR + L L
Sbjct: 412 HAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLW-------- 463
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
D MK++ + + Y +I F ++ +A
Sbjct: 464 ----------------------------DEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAY 495
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAW 475
+EM+ G PN NVE I +W
Sbjct: 496 GYYKEMKDKGMRPN-----------ENVEDMIQSW 519
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 143/550 (26%), Positives = 231/550 (42%), Gaps = 48/550 (8%)
Query: 17 IFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYLE 76
I+ M G+ P + V I CK R + +L + I+I ++ VI+ L
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLC 172
Query: 77 NKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGI-KVEEDVRVDQLKSEKVDCSLVLP 135
G E Q + K+ + S + G KV VR L E + +L+
Sbjct: 173 EHG--LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI-- 228
Query: 136 HLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIR-FTPEFVVEVLQICNKY--GHNVL 192
H + +LSS + I+E + F P+ VV I N+ G VL
Sbjct: 229 ---------THTI--LLSSYYNLHAIEEAYRDMVMSGFDPD-VVTFSSIINRLCKGGKVL 276
Query: 193 NFFSWVRK--QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
+R+ + +Y + ++H L+ +M PV +T+++
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 336
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+ G A FK + D P+ TY L+ LC K + A + +M+
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC--KAGDLSSAEFIITQMLEKS 394
Query: 311 HVPD----KELIETYL--GCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRA 362
+P+ +I Y+ G L E S+L RK D VP +Y +I L +A
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLL--RKMEDQ-----NVVPNGFTYGTVIDGLFKA 447
Query: 363 GKVEEALALAGE--VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
GK E A+ L+ E ++G E+ + ++++ L R GR+++ + M +G+ L
Sbjct: 448 GKEEMAIELSKEMRLIGVEE---NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
YTSLI FFK A+ EEMQ+ G +VV+ + LI G + + W +
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADW-AYKG 563
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
M+ KG PD T+++++ K G SE +KL KM CGI PS ++ V L GK
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 541 RDLARVVLQQ 550
+ A +L Q
Sbjct: 624 MEEAIHILNQ 633
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 116/577 (20%), Positives = 224/577 (38%), Gaps = 49/577 (8%)
Query: 13 EAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVI 72
E + + ME + P +YT + L KA+ L + +M I + V+ ++
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 336
Query: 73 TYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSL 132
L G+ EK +M P + + + G+ D+ + ++
Sbjct: 337 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT--ALVDGLCKAGDLSSAEFIITQMLEKS 394
Query: 133 VLPHLKTYS--------ERDVHEVCRILSSSMDWSLIQEKL--------------EKSAI 170
V+P++ TYS + + E +L D +++ E+ AI
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 171 RFTPEFVVEVLQICNKYGHNVLNFFSWVRK------------QPGYKHTAESYNLAIKIA 218
+ E + ++ N ++N + + G +Y I +
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Query: 219 VSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI---MLYGRIGLTNMAMNCFKEIKADGYS 275
G D + EM+ P ++ ++I + +G++G A +K ++ G
Sbjct: 515 FKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG----ADWAYKGMREKGIE 570
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P +T+ I+ RK + LK++ +M + G P +G LCE G + EA
Sbjct: 571 PDIATFN--IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 336 KCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHAL 395
+ + + L+ I K +A+ E + + L + ++I L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 396 LRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNV 455
+ G + A + M+ +G + SL+ +F V KA+ M ++G PNV
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 456 VTCSALIRGYMNVE--RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
T + +IRG + + +D W MK +G PD TY+ L++ K+G + +M +
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKW--LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806
Query: 514 FKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+M+ G+VP T + + GK AR +L++
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 17/311 (5%)
Query: 243 SETWTIMIMLYGRIGLTNMAMNC-FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALK 301
S W +I + GL + ++ + ++ A G SP LI + C + GR
Sbjct: 93 SRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC-KVGRLSFAISL 151
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRAL 359
+ +I+ D T + LCE G EA + + K+G +P +SY+ +I
Sbjct: 152 LRNRVISI----DTVTYNTVISGLCEHGLADEAYQFLSEMVKMG-ILPDTVSYNTLIDGF 206
Query: 360 CRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
C+ G A AL E+ S L+ +T ++ + +E+A M G
Sbjct: 207 CKVGNFVRAKALVDEI-----SELNLITHTILLSSYYNLHAIEEAYRD---MVMSGFDPD 258
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
+ ++S+I K +V + ++ EM++ PN VT + L+ A ++
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+M ++G D Y++L+ L K G EA K +L+ VP+ + + + GL + G
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 540 KRDLARVVLQQ 550
A ++ Q
Sbjct: 379 DLSSAEFIITQ 389
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P+ +TY+ I K ++ D K + +++ G +++ T + LC++G +A
Sbjct: 641 PNLTTYR--IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698
Query: 336 KCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH 393
++ G+ +P ++++ ++ V +AL+ ++ A S + T +II
Sbjct: 699 MVMGDMEARGF-IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP-NVATYNTIIR 756
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
L G +++ + MK +G++ Y +LI K + +M I EM G P
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
T + LI + NV + + A + M +G P+ TY +++ LCK+
Sbjct: 817 KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 390 SIIHALLRK----GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII-E 444
S+ H L R RL A + AM G+ ++ SLI F V + +I
Sbjct: 59 SLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYS 118
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
+M G P+V + LI + V R A ++ + D TY+ +++ LC+ G
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHG 175
Query: 505 RSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDL 554
++EA + + +M+ GI+P T+++ T+ G + G A+ ++ + S+L
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL 225
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 152/341 (44%), Gaps = 8/341 (2%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G+ +N+ + + + +F E+ + + T ++ +I Y ++G +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+++ P TY LI ALC K K+D A ++ EM G +P+ + T +
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALC--KENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKS 381
G + ++ + G + Y+ ++ C+ G + A + V G +
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI---VDGMIRR 409
Query: 382 SL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
L D++T ++I R G +E AL M Q GI+L +++L+ KE +V A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ EM ++G +P+ VT + ++ + + + M+ G P TY++LL
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
LCK+G+ + A L+ ML+ G+VP I + T+ G +R
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 179/450 (39%), Gaps = 95/450 (21%)
Query: 190 NVLNFFSWVRKQPGYKHTAESYNLA----------------IKIAVSGKDFKHMRNLFF- 232
++ FF ++ QPG++ T E+Y + I++ VS K ++F
Sbjct: 100 SIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFIS 159
Query: 233 --EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFK----------------------- 267
EMR P+ +++ Y +G A+ CF+
Sbjct: 160 LVEMRVT--PMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMK 217
Query: 268 ------------EIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDK 315
EI G+ + + L+ C K + DA K++ E+ P
Sbjct: 218 LNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFC--KEGNISDAQKVFDEITKRSLQPTV 275
Query: 316 ELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALAL-- 371
T + C+VG++ E + ++K T P +YS +I ALC+ K++ A L
Sbjct: 276 VSFNTLINGYCKVGNLDEGFRLKHQMEK-SRTRPDVFTYSALINALCKENKMDGAHGLFD 334
Query: 372 -----------------------AGEVVGAEKS---------SLDQVTCGSIIHALLRKG 399
GE+ ++S D V ++++ + G
Sbjct: 335 EMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG 394
Query: 400 RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
L A +D M ++G++ YT+LI F + V A+EI +EM Q+G E + V S
Sbjct: 395 DLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFS 454
Query: 460 ALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDC 519
AL+ G R IDA M G PD TY+M++ CK G ++ KL+ +M
Sbjct: 455 ALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Query: 520 GIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
G VPS + + + GL + G+ A ++L
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%)
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
G L ++V+ L+ F KE + A ++ +E+ + +P VV+ + LI GY V +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
+ + ++M+ PD TYS L+ LCK + + A L +M G++P+ + F T+ G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 535 LNREGKRDLARVVLQQ 550
+R G+ DL + Q+
Sbjct: 355 HSRNGEIDLMKESYQK 370
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 143/311 (45%), Gaps = 12/311 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T IMI + R T A + ++ GY P +T+ LI L KV +A+ +
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG--KVSEAVVLVD 182
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG----YTVPLSYSLIIRALC 360
M+ G PD + + +C G A D L+K+ +YS II +LC
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLA---LDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 361 RAGKVEEALALAGEV-VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
R G ++ A++L E+ KSS+ VT S++ L + G+ D + M + I
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSV--VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
+ + L+ F KE ++ +A E+ +EM G PN++T + L+ GY R +A N+
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
M PD T++ L+ C V R ++ MK+ + G+V + + + + G + G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 540 KRDLARVVLQQ 550
K LA + Q+
Sbjct: 418 KIKLAEELFQE 428
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 158/375 (42%), Gaps = 39/375 (10%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
+ G + +YN + D +L +M N T++ +I R G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
A++ FKE++ G S TY L+ LC K K +D + +M++ VP+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLC--KAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAE 379
L + G + EA + + G + + +Y+ ++ C ++ EA + +V
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV-RN 362
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF--------- 430
K S D VT S+I R++D + + ++G+ Y+ L+ F
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 431 ---FKE-----------------------KQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
F+E ++ KA+EI E++Q+S + +V + +I G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
+ DAWN+F + KG P+ TY+++++ LCK G EA L+ KM + G P+
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 525 TINFRTVFFGLNREG 539
+ T+ R+G
Sbjct: 543 DCTYNTLIRAHLRDG 557
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/547 (21%), Positives = 233/547 (42%), Gaps = 19/547 (3%)
Query: 13 EAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVI 72
+A +F+ M P+ ++ F + + + +L +++ + IA + +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 73 TYLEN--KGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDV-RVDQLKSEKVD 129
K FA + M + F+ K +F+ KV E V VD++
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 130 CSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKS--AIRFTPEFVVEVLQICNKY 187
P + TY+ V+ +CR +S+ L+++ E++ A FT +++ L C
Sbjct: 191 -----PDVVTYNSI-VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL--CRDG 242
Query: 188 GHNV-LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETW 246
+ ++ F + + G K + +YN ++ + L +M T+
Sbjct: 243 CIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 247 TIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEM 306
+++ ++ + G A +KE+ G SP+ TY L+ C + ++ +A M M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN--RLSEANNMLDLM 359
Query: 307 INAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKV 365
+ PD + + C V V + K ++ K G ++YS++++ C++GK+
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 366 EEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTS 425
+ A L E+V + D +T G ++ L G+LE AL + +++ + L I +YT+
Sbjct: 420 KLAEELFQEMV-SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 426 LIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKG 485
+I K +V A + + G +PNV+T + +I G +A + +M+ G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 486 PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
P+ TY+ L+ + G + KLI +M CG + + V L KR R
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLR 598
Query: 546 VVLQQKS 552
L + S
Sbjct: 599 YCLSKGS 605
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 37/276 (13%)
Query: 295 KVDDALKMYGEMINAGHVPD------------------------KEL-----------IE 319
K DDA+ ++ EMI + +P K+L +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGA 378
+ C C A + K+GY +++ +I+ L GKV EA+ L +V
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV-E 186
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
D VT SI++ + R G AL + M+++ +K + Y+++I ++ +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A+ + +EM+ G + +VVT ++L+RG + D + M + P+ T+++LL
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
K G+ +EA +L +M+ GI P+ I + T+ G
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
+ +LI F E +V +A+ +++ M ++G +P+VVT ++++ G A ++ +M+
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
+ D TYS ++ LC+ G + A+ L +M GI S + + ++ GL + GK +
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 543 LARVVLQQKSDLIRR 557
++L+ D++ R
Sbjct: 281 DGALLLK---DMVSR 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Query: 364 KVEEALALAGEVVGAEK-SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
K ++A+AL E++ + SL V A+ R + L ++ GI I+
Sbjct: 68 KKDDAIALFQEMIRSRPLPSL--VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
+I F + + A ++ ++ + GYEP+ T + LI+G + +A + RM
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
G PD TY+ ++ +C+ G + A+ L+ KM + + + T+ L R+G D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 543 LA 544
A
Sbjct: 246 AA 247
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/563 (19%), Positives = 237/563 (42%), Gaps = 61/563 (10%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+ A ++F M +G KP ++ + ++ CKA T+ L++L+ M++ + +++
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDC 130
+++ +G EK+ + L P+ V + R+ L E
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDI-------------VTFNSRISALCKE---- 265
Query: 131 SLVLPHLKTYSERDVHEVCRIL-SSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH 189
VL + +S+ ++ E + +S+ ++L+ + K +
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL-----------------E 308
Query: 190 NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIM 249
+ F +R+ + +SYN+ ++ V F + +M + ++ I+
Sbjct: 309 DAKTLFESIRENDDLA-SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 250 IMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA 309
+ ++G+ + A +K +G P TY L+ C KVD A + EM+
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG--KVDAAKSLLQEMMRN 425
Query: 310 GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEA 368
+P+ L L ++G + EA + + + GY + ++ ++I+ LC +G++++A
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 369 LA---------------LAGEVVGAEKSSL-------DQVTCGSIIHALLRKGRLEDALA 406
+ L +G SL D +T ++++ L + GR +A
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
M + ++ Y I HF K+ ++ A ++++M++ G ++ T ++LI G
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
+ + + MK KG P+ TY+ + LC+ + E+A L+ +M+ I P+
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 527 NFRTVFFGLNREGKRDLARVVLQ 549
+F+ + + D+A+ V +
Sbjct: 666 SFKYLIEAFCKVPDFDMAQEVFE 688
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 153/368 (41%), Gaps = 46/368 (12%)
Query: 194 FFSWVRKQP---GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
F SW+ K G ++NL I+ R LF EM T+ I++
Sbjct: 130 FVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILV 189
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
Y + GLT+ + +++ G P++ Y ++ + C R+GR DD+ KM +M G
Sbjct: 190 RGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC-REGRN-DDSEKMVEKMREEG 247
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLK---KIGYTVP--LSYSLIIRALCRAGKV 365
VPD + + LC+ G VL+A + ++ +G P ++Y+L+++ C+ G
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG-- 305
Query: 366 EEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTS 425
LEDA +++++ ++ Y
Sbjct: 306 ----------------------------------LLEDAKTLFESIRENDDLASLQSYNI 331
Query: 426 LIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKG 485
+ + + +A ++++M G P++ + + L+ G + DA + MK G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 486 PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
PD TY LL C VG+ + A L+ +M+ +P+ + L + G+ A
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 546 VVLQQKSD 553
+L++ ++
Sbjct: 452 ELLRKMNE 459
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
I R L RA EE L ++ + + S++ + ++ A + ++ +
Sbjct: 45 IARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSR 104
Query: 415 --GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
K ++++Y L+ KE++V + ++M G P T + LIR +
Sbjct: 105 FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVD 164
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
A +F M KG P+ T+ +L+ CK G +++ ++L+ M G++P+ + + T+
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 533 FGLNREGKRD 542
REG+ D
Sbjct: 225 SSFCREGRND 234
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 197/450 (43%), Gaps = 14/450 (3%)
Query: 94 SKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILS 153
+ L FS V G E + D + V C + + +V VC+++
Sbjct: 85 ASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVE-----SSTNPEEVERVCKVID 139
Query: 154 S--SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESY 211
++D ++ + L++ + + + +VEVL+ FF W ++ G+ H + +Y
Sbjct: 140 ELFALDRNM-EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTY 198
Query: 212 NLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKA 271
N + I + F+ M ++ EM +T ET+TI + + A+ F+ +K
Sbjct: 199 NSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKK 257
Query: 272 DGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
+ T L+ +L GR K+ ++ + + P+ L C V ++
Sbjct: 258 YKFKIGVETINCLLDSL-GRA--KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 332 LEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGS 390
+EA + + + G + ++++++ L R+ K +A+ L V+ ++ + +
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF-HVMKSKGPCPNVRSYTI 373
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I ++ +E A+ D M G++ VYT LI F +K++ E+++EMQ+ G
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+ P+ T +ALI+ N + P A ++ +M P T++M++ E
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGR 493
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+ +M+ GI P ++ + GL EGK
Sbjct: 494 AVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 6/297 (2%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +I Y GL A + G+SP TY +I LC K K + A +++
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC--KHGKYERAKEVFA 329
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRA 362
EM+ +G PD + L C+ G V+E K ++ VP + +S ++ R+
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD-VVPDLVCFSSMMSLFTRS 388
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G +++AL V A D V +I RKG + A+ + M QQG + +
Sbjct: 389 GNLDKALMYFNSVKEAGLIP-DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
Y +++ K K +G+A ++ EM + P+ T + LI G+ + +A +F +MK
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
K D TY+ LL KVG + A ++ M+ I+P+ I++ + L +G
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 41/316 (12%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGE 305
+TI+I Y R G+ ++AMN E+ G + TY ++ LC RK + +A K++ E
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK--MLGEADKLFNE 470
Query: 306 MINAGHVPDKELIETYLGCLCEVGSVLEA-------------------RKCTDSLKKIG- 345
M PD + + C++G++ A D K+G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 346 ----------------YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
P+SYS+++ ALC G + EA + E++ ++ + C
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI-SKNIKPTVMICN 589
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ-- 447
S+I R G D + ++ M +G Y +LI F +E+ + KA ++++M+
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
Q G P+V T ++++ G+ + +A V +M +G PD TY+ ++
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 508 EAMKLIFKMLDCGIVP 523
EA ++ +ML G P
Sbjct: 710 EAFRIHDEMLQRGFSP 725
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 158/370 (42%), Gaps = 37/370 (10%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
++L I+ V + + F +R + V+ + +I RIG +A ++EI
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
G + T ++ ALC K K++ ++ G PD T + G
Sbjct: 228 RSGVGINVYTLNIMVNALC--KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 331 VLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALAL------------------ 371
+ EA + +++ G++ + +Y+ +I LC+ GK E A +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 372 -------AGEVVGAEK--SSL-------DQVTCGSIIHALLRKGRLEDALAKIDAMKQQG 415
G+VV EK S + D V S++ R G L+ AL +++K+ G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 416 IKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAW 475
+ +YT LI + ++ + AM + EM Q G +VVT + ++ G + +A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 476 NVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL 535
+F M + FPD T ++L+ CK+G + AM+L KM + I + + T+ G
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 536 NREGKRDLAR 545
+ G D A+
Sbjct: 526 GKVGDIDTAK 535
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 161/352 (45%), Gaps = 7/352 (1%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
V F S V+++ Y +YN I S + L M + T+ +I
Sbjct: 254 VGTFLSQVQEKGVYPDIV-TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVI 312
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+ G A F E+ G SP +TY+ L++ C +KG V+ K++ +M +
Sbjct: 313 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC-KKGDVVETE-KVFSDMRSRD 370
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEA 368
VPD + + G++ +A +S+K+ G +P + Y+++I+ CR G + A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL-IPDNVIYTILIQGYCRKGMISVA 429
Query: 369 LALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
+ L E++ + ++D VT +I+H L ++ L +A + M ++ + + T LI
Sbjct: 430 MNLRNEML-QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
K + AME+ ++M++ +VVT + L+ G+ V A ++ M K P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+YS+L+ LC G EA ++ +M+ I P+ + ++ G R G
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 155/354 (43%), Gaps = 8/354 (2%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
+ G + +Y + A D +F +MR + ++ M+ L+ R G +
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
A+ F +K G P Y LI C RKG + A+ + EM+ G D T
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYC-RKG-MISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL--IIRALCRAGKVEEALALAGEVVGA 378
L LC+ + EA K + + + P SY+L +I C+ G ++ A+ L + +
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERAL-FPDSYTLTILIDGHCKLGNLQNAMELF-QKMKE 508
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
++ LD VT +++ + G ++ A M + I T Y+ L+ + + +
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A + +EM +P V+ C+++I+GY D + +M +G PD +Y+ L+
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 499 CLCKVGRSEEAMKLIFKMLD--CGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ +A L+ KM + G+VP + ++ G R+ + A VVL++
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 198/465 (42%), Gaps = 25/465 (5%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+++ + S+ + EA+++ +M +G P +Y I LCK + E +V EM S
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
++ + ++ KG+ EKV + + P+ S D +
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEV 180
S K + ++P Y+ + CR S+ +L E L++ + +
Sbjct: 396 MYFNSVKE--AGLIPDNVIYTIL-IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 181 LQICN-KYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGK--DFKHMRNLFFEMRRN 237
+C K F+ + ++ + +SY L I I K + ++ LF +M+
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALF---PDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 238 NYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS----PSRSTYKYLIIALCGRKG 293
+ T+ ++ +G++G + A KEI AD S P+ +Y L+ ALC +
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTA----KEIWADMVSKEILPTPISYSILVNALCSKG- 564
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LS 351
+ +A +++ EMI+ P + + + C G+ + + + G+ VP +S
Sbjct: 565 -HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF-VPDCIS 622
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKID 409
Y+ +I R + +A L ++ E+ L D T SI+H R+ ++++A +
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKM-EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
M ++G+ YT +I F + + +A I +EM Q G+ P+
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 22/232 (9%)
Query: 341 LKKIGYTVP------LSYSLIIRALCRAGKVEEALALAGEVV---GAEK----SSLDQV- 386
+ ++G+ P LS S +I L R+G++ +A + ++ G + +SLD
Sbjct: 99 VDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTF 158
Query: 387 -TCGS-------IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
CGS +I ++ +L +A ++ +G ++I +LI + V
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A + +E+ +SG NV T + ++ + +++ KG +PD TY+ L++
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G EEA +L+ M G P + TV GL + GK + A+ V +
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 107/190 (56%), Gaps = 1/190 (0%)
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
SY+ +IR C ++E+AL LA E+ G+ S VT G +I A + G++++A+ +
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
MK G++ + VYTSLI F ++ + + +E+ + G P +T + LIRG+ +
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+ +A +F M +G P+ TY+ L+ LC VG+++EA++L+ M++ P+ + +
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 530 TVFFGLNREG 539
+ L ++G
Sbjct: 357 IIINKLCKDG 366
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 6/282 (2%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A++ +E++ + P +Y +I C +G++++ AL++ EM +G
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFC--EGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ C+ G + EA +K +G L Y+ +IR C G+++ AL EV+
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
S +T ++I + G+L++A + M ++G++ ++ YT LI + +A+
Sbjct: 279 SPC-AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+++ M + EPN VT + +I DA + MK + PD TY++LL L
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 501 CKVGRSEEAMKLIFKML-DCGIV-PSTINFRTVFFGLNREGK 540
C G +EA KL++ ML D P I++ + GL +E +
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 161/342 (47%), Gaps = 6/342 (1%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
SYN I+ GK+ + L EM+ + + TW I+I + + G + AM KE+
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
K G Y LI C ++D ++ E++ G P T + C++G
Sbjct: 239 KFMGLEADLVVYTSLIRGFC--DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 330 SVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
+ EA + + + + G + +Y+ +I LC GK +EAL L ++ ++ + VT
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP-NAVTY 355
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM-Q 447
II+ L + G + DA+ ++ MK++ + Y L+ + + +A +++ M +
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 448 QSGY-EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
S Y +P+V++ +ALI G R A +++ + K D T ++LL K G
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
+AM+L ++ D IV ++ + + G + G ++A+ +L
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 8/279 (2%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G++ + + L+ LC + + A+ + EM +PD T + CE +
Sbjct: 137 GFAFNVYNHNILLKGLC--RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 333 EARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCG 389
+A + + +K G + L ++ ++I A C+AGK++EA+ E+ +G E D V
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA---DLVVYT 251
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
S+I G L+ A D + ++G Y +LI F K Q+ +A EI E M +
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
G PNV T + LI G V + +A + M K P+ TY++++ LCK G +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
++++ M P I + + GL +G D A +L
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 149/367 (40%), Gaps = 49/367 (13%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLF-FEMRRNNYPVTSETWTIMIMLYGRIGLT 259
+ G A +YN I+ K +F F + R P T+T +I +G T
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP-NVYTYTGLIDGLCGVGKT 333
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
A+ + P+ TY +I LC K V DA+++ M PD
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLC--KDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 320 TYLGCLCEVGSVLEARKCTD-SLKKIGYTVP--LSYSLIIRALCRAGKVEEALA---LAG 373
LG LC G + EA K LK YT P +SY+ +I LC+ ++ +AL L
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL-------------------AKIDAMKQQ 414
E +GA D+VT ++++ L+ G + A+ A ID +
Sbjct: 452 EKLGAG----DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 415 G----------------IKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTC 458
G ++ ++ Y L+ KE + +A + EEMQ+ P+VV+
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 459 SALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
+ +I G + A ++ M G PD TYS L+ K+G +EA+ KM+D
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 519 CGIVPST 525
G P
Sbjct: 628 SGFEPDA 634
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG--SVLEARKCTDSLKKIGYTVP 349
K V+ A++++ ++ ++ V + + + C+ G +V + C + ++ +V
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV- 529
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
Y+ ++ +LC+ G +++A L E+ + + D V+ +I L+ G ++ A + +
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEM-QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
M + G+ + Y+ LI F K + +A+ ++M SG+EP+ C ++++
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 69/147 (46%)
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
A + M ++G ++ + L+ + + GKA+ ++ EM+++ P+V + + +IR
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
G+ + A + MK G T+ +L+ CK G+ +EAM + +M G+
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 524 STINFRTVFFGLNREGKRDLARVVLQQ 550
+ + ++ G G+ D + + +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDE 272
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 201/451 (44%), Gaps = 16/451 (3%)
Query: 94 SKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILS 153
+ L FS V G E + D + V C + + +V VC+++
Sbjct: 85 ASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVE-----SSTNPEEVERVCKVID 139
Query: 154 S--SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESY 211
++D ++ + L++ + + + +VEVL+ FF W ++ G+ H + +Y
Sbjct: 140 ELFALDRNM-EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTY 198
Query: 212 NLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKA 271
N + I + F+ M ++ EM +T ET+TI + + A+ F+ +K
Sbjct: 199 NSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKK 257
Query: 272 DGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
+ T L+ +L GR K+ ++ + + P+ L C V ++
Sbjct: 258 YKFKIGVETINCLLDSL-GRA--KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 332 LEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGS 390
+EA + + + G + ++++++ L R+ K +A+ L V+ ++ + +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF-HVMKSKGPCPNVRSYTI 373
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I ++ +E A+ D M G++ VYT LI F +K++ E+++EMQ+ G
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+ P+ T +ALI+ N + P ++ +M P T++M++ V R+ E
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF-VARNYEMG 492
Query: 511 KLIF-KMLDCGIVPSTINFRTVFFGLNREGK 540
+ ++ +M+ GI P ++ + GL EGK
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 201/451 (44%), Gaps = 16/451 (3%)
Query: 94 SKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILS 153
+ L FS V G E + D + V C + + +V VC+++
Sbjct: 84 ASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVE-----SSTNPEEVERVCKVID 138
Query: 154 S--SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESY 211
++D ++ + L++ + + + +VEVL+ FF W ++ G+ H + +Y
Sbjct: 139 ELFALDRNM-EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTY 197
Query: 212 NLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKA 271
N + I + F+ M ++ EM +T ET+TI + + A+ F+ +K
Sbjct: 198 NSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKK 256
Query: 272 DGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
+ T L+ +L GR K+ ++ + + P+ L C V ++
Sbjct: 257 YKFKIGVETINCLLDSL-GRA--KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 313
Query: 332 LEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGS 390
+EA + + + G + ++++++ L R+ K +A+ L V+ ++ + +
Sbjct: 314 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF-HVMKSKGPCPNVRSYTI 372
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I ++ +E A+ D M G++ VYT LI F +K++ E+++EMQ+ G
Sbjct: 373 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+ P+ T +ALI+ N + P ++ +M P T++M++ V R+ E
Sbjct: 433 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF-VARNYEMG 491
Query: 511 KLIF-KMLDCGIVPSTINFRTVFFGLNREGK 540
+ ++ +M+ GI P ++ + GL EGK
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 140/569 (24%), Positives = 231/569 (40%), Gaps = 69/569 (12%)
Query: 2 VAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKI 61
+ V + + + ++F M++ I P+ Y V I LCK R D ++ DEM A ++
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 62 AIRDEVFHWVITYLENKGE----FAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEED 117
++ +I G F V+E+++ H L F+ K +F VE+
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI--TFNTLLKGLFKAGMVED- 302
Query: 118 VRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFV 177
+ + E D V P T+S IL D EK E + + E
Sbjct: 303 --AENVLKEMKDLGFV-PDAFTFS---------IL---FDGYSSNEKAEAALGVY--ETA 345
Query: 178 VEVLQICNKYGHNVLNFFSWVRKQPGYKHTAES----------------YNLAIKIAVSG 221
V+ N Y ++L + + K+ G AE YN I
Sbjct: 346 VDSGVKMNAYTCSIL--LNALCKE-GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
D R M + + +I + +G A ++K G SPS TY
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 282 KYLIIALCGRKGRK--VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTD 339
LI G GRK D + EM + G +P+ T + CLC+ +LEA+
Sbjct: 463 NILI----GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 340 SLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALL 396
++ G + + Y+++I C GK+E+A + E++ G E L+ VT ++I L
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE---LNLVTYNTLIDGLS 575
Query: 397 RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVV 456
G+L +A + + ++G+K + Y SLI + V + + + EEM++SG +P +
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 457 TCSALI-----RGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
T LI G ER +F M LK PD Y+ +L C G E+A
Sbjct: 636 TYHLLISLCTKEGIELTER------LFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 512 LIFKMLDCGIVPSTINFRTVFFGLNREGK 540
L +M++ I + ++ G + GK
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 45/381 (11%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
YN+ I GK LF EM + T+ +I Y + G + + +K
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD----KELIETYLGCLC 326
AD PS T+ L+ L K V+DA + EM + G VPD L + Y
Sbjct: 277 ADHIEPSLITFNTLLKGLF--KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 327 EVGSVLEARKCTDS-LKKIGYTVPLSYSLIIRALCRAGKVEEALAL-------------- 371
++ DS +K YT S+++ ALC+ GK+E+A +
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTC----SILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 372 -----------AGEVVGA-------EKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAM 411
G++VGA EK + D + +I G +E+A +++ M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
K +G+ ++ Y LI + ++ + K +I++EM+ +G PNVV+ LI +
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
++A V M+ +G P Y+ML+ C G+ E+A + +ML GI + + + T+
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 532 FFGLNREGKRDLARVVLQQKS 552
GL+ GK A +L + S
Sbjct: 571 IDGLSMTGKLSEAEDLLLEIS 591
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 16/366 (4%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLY 253
FF+ + G +++S L + V K F+ N+F + +++ + + I
Sbjct: 132 FFAL--RNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAA 189
Query: 254 GRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVP 313
++ + F +K D PS Y LI LC KG++++DA +++ EM+ +P
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC--KGKRMNDAEQLFDEMLARRLLP 247
Query: 314 DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALAL 371
T + C+ G+ ++ K + +K + P ++++ +++ L +AG VE+A
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKA-DHIEPSLITFNTLLKGLFKAGMVEDA--- 303
Query: 372 AGEVVGAEKSSL----DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
E V E L D T + + E AL + G+K+ + + L+
Sbjct: 304 --ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
KE ++ KA EI+ G PN V + +I GY + A M+ +G
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVV 547
PD Y+ L+ C++G E A K + KM G+ PS + + G R+ + D +
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 548 LQQKSD 553
L++ D
Sbjct: 482 LKEMED 487
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 119/588 (20%), Positives = 220/588 (37%), Gaps = 83/588 (14%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G +++A ++F M + + P+ +Y I CKA E KV + M+A
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFS--------ESKKQVFVGI 112
I F+ ++ L G E V + P+ F+ S ++ +
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 113 KVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRF 172
V E +K CS++L L E + + IL M L+ ++ + +
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNAL--CKEGKIEKAEEILGREMAKGLVPNEVIYNTM-- 395
Query: 173 TPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFF 232
+ C K ++ G K +YN I+ + ++
Sbjct: 396 -------IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC-GR 291
+M+ + ET+ I+I YGR + + KE++ +G P+ +Y LI LC G
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGS 508
Query: 292 K------------GRKVDDALKMYGEMINA----GHVPD-----KELIE----------- 319
K R V +++Y +I+ G + D KE+++
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGE---- 374
T + L G + EA + + G + +Y+ +I AG V+ +AL E
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 375 --------------------------VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
+ G D + ++H G +E A
Sbjct: 629 GIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
M ++ I L Y SLI+ K ++ + +I+EM EP T + +++G+ V
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
+ + A+ + M+ KG D + L++ L + RS+EA +I +M
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQ---------------VGKAMEIIEEMQQSGYEPNV 455
+K + ++TI+V+ +++ F+ + VGK +E+ M+ P+V
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSV 214
Query: 456 VTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
+ LI G +R DA +F M + P TY+ L+ CK G E++ K+ +
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 516 MLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDL 554
M I PS I F T+ GL + G + A VL++ DL
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 156/334 (46%), Gaps = 11/334 (3%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
YN+ + D + L EM T+ +I +Y + + A++ ++
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEM---INAGHVPDKELIETYLGCLCE 327
G +P+ TY I R+GR + +A +++ E+ + A HV LI+ Y C
Sbjct: 266 RSGVAPNIVTYNSFIHGF-SREGR-MREATRLFREIKDDVTANHVTYTTLIDGY----CR 319
Query: 328 VGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV 386
+ + EA + + ++ G++ + +Y+ I+R LC G++ EA L E+ G +K D +
Sbjct: 320 MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG-KKIEPDNI 378
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
TC ++I+A + + A+ M + G+KL ++ Y +LI F K ++ A E + M
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM 438
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
+ G+ P T S L+ G+ N + + + + +G D Y L+ +CK+ +
Sbjct: 439 IEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQV 498
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+ A L M G+V ++ F T+ + R GK
Sbjct: 499 DYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 177/437 (40%), Gaps = 61/437 (13%)
Query: 161 IQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLN--FFSWVRKQPGYKHTAESYNLAIKIA 218
+ L KSAI T + + E L + + YG L+ FF W P KH+ +S I I
Sbjct: 34 VDSGLLKSAI--TTQVISE-LSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILIL 90
Query: 219 VSGKDFKHMRNLFFEMRRN---NYPVT---------------SETWTIMIMLYGRIGLTN 260
K FK L ++ + + P+ S ++ +++ Y + G+ N
Sbjct: 91 TKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIN 150
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIAL-------------------------------- 288
++ F++I++ G P L+ +L
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 289 --CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
C + G + A K+ EM G PD T + C+ EA D +++ G
Sbjct: 211 HACSKSGDP-EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGV 269
Query: 347 TVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
+ +Y+ I R G++ EA L E+ + + + VT ++I R +++AL
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+ M+ +G + Y S++ ++ ++ +A ++ EM EP+ +TC+ LI Y
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAY 387
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
+E + A V +M G D +Y L+ CKV E A + +F M++ G P
Sbjct: 388 CKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 526 INFRTVFFGLNREGKRD 542
+ + G + K+D
Sbjct: 448 ATYSWLVDGFYNQNKQD 464
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 397 RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVV 456
+ G + D++ + ++ G+K + T L+ K++ +I ++M + G N+
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 457 TCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
+ L+ P A + M+ KG FPD TY+ L++ CK EA+ + +M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 517 LDCGIVPSTINFRTVFFGLNREGK-RDLARVVLQQKSDL 554
G+ P+ + + + G +REG+ R+ R+ + K D+
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
++HA + G E A + M+++G+ I Y +LI + K+ +A+ + + M++SG
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
PN+VT ++ I G+ R +A +F +K + TY+ L+ C++ +EA+
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKS 552
+L M G P + + ++ L +G+ A +L + S
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 387 TCGSIIHALLRKGRLEDALAKI-DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
C ++++L+++ RL D + KI M + G+ IHVY L+ K KA +++ E
Sbjct: 170 ACTVLLNSLVKQ-RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE 228
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M++ G P++ T + LI Y +A +V RM+ G P+ TY+ + + GR
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR 288
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
EA +L F+ + + + + + T+ G R D A
Sbjct: 289 MREATRL-FREIKDDVTANHVTYTTLIDGYCRMNDIDEA 326
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 152/335 (45%), Gaps = 6/335 (1%)
Query: 208 AESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFK 267
A +Y + + + L +M + YP + T+ ++ +G N ++ +
Sbjct: 141 ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE 200
Query: 268 EIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCE 327
+ G +P+ TY +L+ A K R D+A+K+ E+I G P+ L C+
Sbjct: 201 RLMQKGLAPNAFTYSFLLEA--AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 328 VGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV 386
G +A L G+ + SY++++R LC G+ EEA +L E+ G +++ V
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP-SVV 317
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQG--IKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
T +I++L GR E AL + M + ++T Y +I KE +V ++ ++
Sbjct: 318 TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLD 377
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
EM +PN T +A+ + + +A+ + + K + Y ++T LC+ G
Sbjct: 378 EMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKG 437
Query: 505 RSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+ A +L+++M CG P + + GL EG
Sbjct: 438 NTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 2/259 (0%)
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YS 353
+ D+ ++ GH P+ L LC+ + +A + + + G S Y+
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
++ LC+ G V A+ L ++ S + VT +++ L G L +L ++ + Q
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPS-NTVTYNALVRGLCMLGSLNQSLQFVERLMQ 204
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
+G+ Y+ L+ +KE+ +A+++++E+ G EPN+V+ + L+ G+ R D
Sbjct: 205 KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
A +F + KG + +Y++LL CLC GR EEA L+ +M PS + + +
Sbjct: 265 AMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILIN 324
Query: 534 GLNREGKRDLARVVLQQKS 552
L G+ + A VL++ S
Sbjct: 325 SLAFHGRTEQALQVLKEMS 343
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 194/473 (41%), Gaps = 38/473 (8%)
Query: 10 HISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFH 69
++S+++ +S+ G KP T + +LCKA+R + ++V++ M +S I +
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 70 WVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK---KQVFVGIKVEEDVRVDQLKSE 126
+++ L +G M K+ + + + G+ + + E
Sbjct: 146 YLVNQLCKRGNVGYA-----MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE 200
Query: 127 KVDCSLVLPHLKTYS--------ERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVV 178
++ + P+ TYS ER E ++L +I + E + + + V
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDE-----IIVKGGEPNLVSYN----V 251
Query: 179 EVLQICNKYGHNVLNFFSWVRKQP--GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRR 236
+ C K G + + R+ P G+K SYN+ ++ ++ +L EM
Sbjct: 252 LLTGFC-KEGRTD-DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Query: 237 NNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADG--YSPSRSTYKYLIIALCGRKGR 294
+ + T+ I+I G T A+ KE+ + + ++Y +I LC K
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC--KEG 367
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS-VLEARKCTDSL-KKIGYTVPLSY 352
KVD +K EMI P+ E +G LCE S V EA SL K Y
Sbjct: 368 KVDLVVKCLDEMIYRRCKPN-EGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFY 426
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
+I +LCR G A L E+ D T ++I L +G A+ + M+
Sbjct: 427 KSVITSLCRKGNTFAAFQLLYEMTRCGFDP-DAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 413 Q-QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
+ + K T+ + ++I+ K ++ AME+ E M + PN T + L+ G
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 12/253 (4%)
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
+ G P S Y YL+ LC R V A+++ +M + G+ + + LC +GS
Sbjct: 134 SSGIIPDASAYTYLVNQLCKRG--NVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 331 VLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVT 387
+ ++ + + L + G +YS ++ A + +EA+ L E++ G E + V+
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP---NLVS 248
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
++ ++GR +DA+A + +G K + Y L+ + + +A ++ EM
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP---DFETYSMLLTCLCKVG 504
P+VVT + LI R A V M KG +Y+ ++ LCK G
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS-KGNHQFRVTATSYNPVIARLCKEG 367
Query: 505 RSEEAMKLIFKML 517
+ + +K + +M+
Sbjct: 368 KVDLVVKCLDEMI 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%)
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
E + + +E + G++PNV + L+ R A V M G PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL 535
Y+ L+ LCK G AM+L+ KM D G +T+ + + GL
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGL 186
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 26/341 (7%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGR---IGLTNMAMNCFKEIKADGYSPSRSTYKYLI 285
++ ++ +N P+ + + ++ GR I N + E+K P T LI
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK---IRPDVVTLGILI 336
Query: 286 IALCGRKGRKVDDAL----KMYGEMINAGHV--PDKELIETYLGCLCEVGSVLEARKCTD 339
LC K R+VD+AL +M G+ + G+V D T + LC+VG + EA +
Sbjct: 337 NTLC--KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 340 SLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSS---LDQVTCGSIIHA 394
+K VP ++Y+ +I CRAGK+E A EVV K + VT +I+
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETA----KEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
+ R L A+ M+++G+K + Y +LI V KAM E+M ++G P+
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
ALI G V R DA V ++K G D Y+ML+ C +E+ +++
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 515 KMLDCGIVPSTINFRTV--FFGLNREGKRDLARVVLQQKSD 553
M G P +I + T+ FFG +++ + + R++ Q + D
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFE-SVERMMEQMRED 610
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 129/261 (49%), Gaps = 5/261 (1%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
NMA+ F +++ +G + TY LI A C V+ A+ Y +M+ AG PD ++
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
+ LC+V +A + + LK+ G+++ L +Y+++I C E+ + ++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM-EK 574
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
E D +T ++I + E ++ M++ G+ T+ Y ++I + ++ +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 439 AMEIIEEMQ-QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
A+++ ++M S PN V + LI + + A ++ MK+K P+ ETY+ L
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 498 TCLCKVGRSEEAMKLIFKMLD 518
CL + + E +KL+ +M++
Sbjct: 695 KCLNEKTQGETLLKLMDEMVE 715
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 182/388 (46%), Gaps = 31/388 (7%)
Query: 182 QICNKYGHNVL--NFFSWVR-KQPGYKHTAESYNLA----IKIAVSGKDFKHMRNLFFEM 234
QI + G L +FF ++ K K ES +LA I+ A S D + +E+
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEI 142
Query: 235 -RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
+ N P+T ++I +GR+G+ N ++ ++ + ++ S + +++ + R G
Sbjct: 143 AKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNM---KNSQVRNVVVDVLLRNG 199
Query: 294 RKVDDALKMYGEMINAGHV--PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PL 350
VDDA K+ EM+ V P++ + L + + + E + + + V P
Sbjct: 200 L-VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPN 258
Query: 351 SYSL--IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRK---GRLEDAL 405
S L I +LC+ + A + +++ K+ L+ +++ L R R+ D +
Sbjct: 259 SVWLTRFISSLCKNARANTAWDILSDLM-KNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ-QSGYEPNVVTCSA---- 460
K+D +K + +T+ + LI K ++V +A+E+ E+M+ + + NV+ +
Sbjct: 318 LKMDEVKIRPDVVTLGI---LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 461 -LIRGYMNVERPIDAWNVFYRMKLKGP-FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
LI G V R +A + RMKL+ P+ TY+ L+ C+ G+ E A +++ +M +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 519 CGIVPSTINFRTVFFGLNREGKRDLARV 546
I P+ + T+ G+ R ++A V
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 175/420 (41%), Gaps = 48/420 (11%)
Query: 145 VHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGY 204
+HE I+++ + +++ L++S++ T V ++LQ FF+W Q Y
Sbjct: 98 LHEA--IMANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHY 155
Query: 205 KHTAESYNLAIKIAVS----GKDFKHMRNLFFEMRRNNYPVT------------SETWTI 248
H +YN I I S K F+ + ++ M+RNN V E +
Sbjct: 156 SHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLT 215
Query: 249 MIMLYGR-----------IGLTNMAMNCF------KEIKA------DGYSPSRSTYKYLI 285
+ + + I NM ++ KE +A P +T+ L
Sbjct: 216 HVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLF 275
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
C + R A+K+ EMI AGH P+ + C+ G V EA D + G
Sbjct: 276 FGWC--RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKG 333
Query: 346 YTVPL----SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
V +++L+I AL + K EE L G ++ D T +I + ++
Sbjct: 334 SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIST-GCLPDVSTYKDVIEGMCMAEKV 392
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
++A +D M +G I Y + + ++ +A+++ M +S P+V T + L
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
I + ++ P A+N + M + D ETY ++ L R++EA L+ ++++ G+
Sbjct: 453 ISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 26/341 (7%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGR---IGLTNMAMNCFKEIKADGYSPSRSTYKYLI 285
++ ++ +N P+ + + ++ GR I N + E+K P T LI
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK---IRPDVVTLGILI 336
Query: 286 IALCGRKGRKVDDAL----KMYGEMINAGHV--PDKELIETYLGCLCEVGSVLEARKCTD 339
LC K R+VD+AL +M G+ + G+V D T + LC+VG + EA +
Sbjct: 337 NTLC--KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 340 SLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSS---LDQVTCGSIIHA 394
+K VP ++Y+ +I CRAGK+E A EVV K + VT +I+
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETA----KEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
+ R L A+ M+++G+K + Y +LI V KAM E+M ++G P+
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
ALI G V R DA V ++K G D Y+ML+ C +E+ +++
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 515 KMLDCGIVPSTINFRTV--FFGLNREGKRDLARVVLQQKSD 553
M G P +I + T+ FFG +++ + + R++ Q + D
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFE-SVERMMEQMRED 610
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 132/269 (49%), Gaps = 5/269 (1%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
NMA+ F +++ +G + TY LI A C V+ A+ Y +M+ AG PD ++
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
+ LC+V +A + + LK+ G+++ L +Y+++I C E+ + ++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM-EK 574
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
E D +T ++I + E ++ M++ G+ T+ Y ++I + ++ +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 439 AMEIIEEMQ-QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
A+++ ++M S PN V + LI + + A ++ MK+K P+ ETY+ L
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 498 TCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
CL + + E +KL+ +M++ P+ I
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 182/388 (46%), Gaps = 31/388 (7%)
Query: 182 QICNKYGHNVL--NFFSWVR-KQPGYKHTAESYNLA----IKIAVSGKDFKHMRNLFFEM 234
QI + G L +FF ++ K K ES +LA I+ A S D + +E+
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEI 142
Query: 235 -RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
+ N P+T ++I +GR+G+ N ++ ++ + ++ S + +++ + R G
Sbjct: 143 AKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNM---KNSQVRNVVVDVLLRNG 199
Query: 294 RKVDDALKMYGEMINAGHV--PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PL 350
VDDA K+ EM+ V P++ + L + + + E + + + V P
Sbjct: 200 L-VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPN 258
Query: 351 SYSL--IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRK---GRLEDAL 405
S L I +LC+ + A + +++ K+ L+ +++ L R R+ D +
Sbjct: 259 SVWLTRFISSLCKNARANTAWDILSDLM-KNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ-QSGYEPNVVTCSA---- 460
K+D +K + +T+ + LI K ++V +A+E+ E+M+ + + NV+ +
Sbjct: 318 LKMDEVKIRPDVVTLGI---LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 461 -LIRGYMNVERPIDAWNVFYRMKLKGP-FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
LI G V R +A + RMKL+ P+ TY+ L+ C+ G+ E A +++ +M +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 519 CGIVPSTINFRTVFFGLNREGKRDLARV 546
I P+ + T+ G+ R ++A V
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 117/281 (41%), Gaps = 3/281 (1%)
Query: 183 ICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVT 242
+C +G N+ F ++ G K +Y I S + + + +M
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 243 SETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKM 302
++ + +I ++ + A+ +++K G+S Y LI C + + +M
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN--AEKVYEM 568
Query: 303 YGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCR 361
+M G PD T + + + + +++ G ++ Y +I A C
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
G+++EAL L ++ K + + V +I+A + G AL+ + MK + ++ +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI 462
Y +L ++ Q +++++EM + EPN +T L+
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 158/341 (46%), Gaps = 26/341 (7%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGR---IGLTNMAMNCFKEIKADGYSPSRSTYKYLI 285
++ ++ +N P+ + + ++ GR I N + E+K P T LI
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK---IRPDVVTLGILI 336
Query: 286 IALCGRKGRKVDDAL----KMYGEMINAGHV--PDKELIETYLGCLCEVGSVLEARKCTD 339
LC K R+VD+AL KM G+ + G+V D T + LC+VG + EA +
Sbjct: 337 NTLC--KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 340 SLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSS---LDQVTCGSIIHA 394
+K P ++Y+ +I CRAGK+E A EVV K + VT +I+
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETA----KEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
+ R L A+ M+++G+K + Y +LI V KAM E+M ++G P+
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
ALI G V R DA V ++K G D Y+ML+ C +E+ +++
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 515 KMLDCGIVPSTINFRTV--FFGLNREGKRDLARVVLQQKSD 553
M G P +I + T+ FFG +++ + + R++ Q + D
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFE-SVERMMEQMRED 610
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 132/269 (49%), Gaps = 5/269 (1%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
NMA+ F +++ +G + TY LI A C V+ A+ Y +M+ AG PD ++
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN--VEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGA 378
+ LC+V +A + + LK+ G+++ L +Y+++I C E+ + ++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM-EK 574
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
E D +T ++I + E ++ M++ G+ T+ Y ++I + ++ +
Sbjct: 575 EGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 439 AMEIIEEMQ-QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
A+++ ++M S PN V + LI + + A ++ MK+K P+ ETY+ L
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 498 TCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
CL + + E +KL+ +M++ P+ I
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 180/389 (46%), Gaps = 33/389 (8%)
Query: 182 QICNKYGHNVL--NFFSWVR-KQPGYKHTAESYNLA----IKIAVSGKDFKHMRNLFFEM 234
QI + G L +FF ++ K K ES +LA I+ A S D + +E+
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEI 142
Query: 235 -RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
+ N P+T ++I +GR+G+ N ++ ++ + ++ S + +++ + R G
Sbjct: 143 AKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNM---KNSQVRNVVVDVLLRNG 199
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEV--GSVLEARKCTDSLKKIGY--TVP 349
VDDA K+ EM+ V I + L EV G +L K + + P
Sbjct: 200 L-VDDAFKVLDEMLQKESVFPPNRITADI-VLHEVWKGRLLTEEKIIALISRFSSHGVSP 257
Query: 350 LSYSL--IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRK---GRLEDA 404
S L I +LC+ + A + +++ K+ L+ +++ L R R+ D
Sbjct: 258 NSVWLTRFISSLCKNARANAAWDILSDLM-KNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ-QSGYEPNVVTCSA--- 460
+ K+D +K + +T+ + LI K ++V +A+E+ E+M+ + + NV+ +
Sbjct: 317 VLKMDEVKIRPDVVTLGI---LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 461 --LIRGYMNVERPIDAWNVFYRMKLKGP-FPDFETYSMLLTCLCKVGRSEEAMKLIFKML 517
LI G V R +A + RMKL+ P+ TY+ L+ C+ G+ E A +++ +M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 518 DCGIVPSTINFRTVFFGLNREGKRDLARV 546
+ I P+ + T+ G+ R ++A V
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 117/281 (41%), Gaps = 3/281 (1%)
Query: 183 ICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVT 242
+C +G N+ F ++ G K +Y I S + + + +M
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 243 SETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKM 302
++ + +I ++ + A+ +++K G+S Y LI C + + +M
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN--TEKVYEM 568
Query: 303 YGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCR 361
+M G PD T + + + + +++ G ++ Y +I A C
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
G+++EAL L ++ K + + V +I+A + G AL+ + MK + ++ +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI 462
Y +L ++ Q +++++EM + EPN +T L+
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 191/422 (45%), Gaps = 19/422 (4%)
Query: 120 VDQLKSEKV-DCSLVLPHLKTYSERDVHEVCRILSSS--MDWSLIQEKLEKSAIRFTPEF 176
+ +++S V D + P T S+ D+ + +L ++ + S ++ L+++ I + E
Sbjct: 44 IQRIQSPAVPDSTCTPPQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVEL 103
Query: 177 VVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRR 236
V + + + + F W +PG+ + ++ + ++F+ +L F+ R
Sbjct: 104 VHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVR 163
Query: 237 NNYP---VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSP------SRSTYKYLIIA 287
++ V+++T+ ++I Y R G+ A+ F+ A Y P + L+ A
Sbjct: 164 SDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCKSATELRLLEVLLDA 221
Query: 288 LCGRKG--RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
LC ++G R+ L+ G +++ VP + L + +A K + +K +
Sbjct: 222 LC-KEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMN 280
Query: 346 Y-TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
++Y +I CR +V+ A+ + E+ AE ++ + II L GRL +A
Sbjct: 281 VKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEME-INFMVFNPIIDGLGEAGRLSEA 339
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
L ++ TI Y SL+ +F K + A +I++ M G +P T + +
Sbjct: 340 LGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKY 399
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
+ + + N+++++ G PD TY ++L LC+ G+ AM++ +M + GI P
Sbjct: 400 FSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
Query: 525 TI 526
+
Sbjct: 460 LL 461
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALL----RKGRLEDALAKID 409
+++ ALC+ G V EA ++ E +G S + V I + LL R +L+ A +
Sbjct: 217 VLLDALCKEGHVREA-SMYLERIGGTMDS-NWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
MK +K T+ Y +LI + + ++V AME++EEM+ + E N + + +I G
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
R +A + R + P TY+ L+ CK G A K++ M+ G+ P+T +
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 530 TVF 532
F
Sbjct: 395 HFF 397
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 351 SYSLIIRALCRAGKVEEAL---ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA--- 404
++ ++IR RAG V++A+ A KS+ + ++ AL ++G + +A
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMY 234
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
L +I ++ ++ L+ +F+ +++ +A ++ EEM+ +P VVT LI G
Sbjct: 235 LERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG 294
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
Y + R A V MK+ +F ++ ++ L + GR EA+ ++ + C P+
Sbjct: 295 YCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPT 354
Query: 525 TINFRTVFFGLNREGKRDLARVVLQ 549
+ + ++ + G A +L+
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILK 379
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 6/346 (1%)
Query: 207 TAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNY-PVTSETWTIMIMLYGRIGLTNMAMNC 265
T ++ K K F++ + F +M+ + P M L G+ G ++A+
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRF 225
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
++E++ SP+ T ++ C R G K+D +++ +M G T +
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYC-RSG-KLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 326 CEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLD 384
CE G + A K + + K G + +++ +I CRA K++EA + GE+ A + +
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM-KAVNVAPN 342
Query: 385 QVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
VT ++I+ ++G E A + M GI+ I Y +LI K+ + KA + ++
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
E+ + PN T SALI G + + ++ M G P+ +T++ML++ C+
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 505 RSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ A +++ +M+ I + V GL +GK L + +LQ+
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQE 508
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 6/346 (1%)
Query: 207 TAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNY-PVTSETWTIMIMLYGRIGLTNMAMNC 265
T ++ K K F++ + F +M+ + P M L G+ G ++A+
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRF 225
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
++E++ SP+ T ++ C R G K+D +++ +M G T +
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYC-RSG-KLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 326 CEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLD 384
CE G + A K + + K G + +++ +I CRA K++EA + GE+ A + +
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM-KAVNVAPN 342
Query: 385 QVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
VT ++I+ ++G E A + M GI+ I Y +LI K+ + KA + ++
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
E+ + PN T SALI G + + ++ M G P+ +T++ML++ C+
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 505 RSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ A +++ +M+ I + V GL +GK L + +LQ+
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQE 508
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 35/295 (11%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI-------------- 318
G P T+ L+ LC +GR V AL + M+ GH P +I
Sbjct: 5 GCRPDVVTFTTLMNGLCC-EGR-VLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALN 62
Query: 319 ------ETYLGC-----------LCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALC 360
ET++ LC+ G + A+ + G + ++YS +I + C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
R+G+ +A L +++ + + D VT ++I+AL+++G++ +A M ++GI T
Sbjct: 123 RSGRWTDAEQLLRDMI-ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
Y S+I F K+ ++ A +++ M P+VVT S LI GY +R + +F
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL 535
M +G + TY+ L+ C+VG + A L+ M+ G+ P+ I F+++ L
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 5/200 (2%)
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
++++ ++ LC G+V +ALAL +V G+II+ L + G E AL +
Sbjct: 11 VTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPY-----GTIINGLCKMGDTESALNLLS 65
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M++ IK + +Y ++I K+ A + EM G P+V+T S +I +
Sbjct: 66 KMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
R DA + M + PD T+S L+ L K G+ EA ++ ML GI P+TI +
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 530 TVFFGLNREGKRDLARVVLQ 549
++ G ++ + + A+ +L
Sbjct: 186 SMIDGFCKQDRLNDAKRMLD 205
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
D VT ++++ L +GR+ ALA +D M ++G + Y ++I K A+ ++
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLL 64
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
+M+++ + +VV +A+I I A N+F M KG FPD TYS ++ C+
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 504 GRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIRR 557
GR +A +L+ M++ I P + F + L +EGK A + D++RR
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY---GDMLRR 175
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 4/240 (1%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
YN I H +NLF EM T++ MI + R G A +++
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
+P T+ LI AL K KV +A ++YG+M+ G P + + C+
Sbjct: 139 ERQINPDVVTFSALINALV--KEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 331 VLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
+ +A++ DS+ + +++S +I C+A +V+ + + E + + VT
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE-MHRRGIVANTVTYT 255
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
++IH + G L+ A ++ M G+ + S++ +K++ KA I+E++Q+S
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 11/346 (3%)
Query: 205 KHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMN 264
K ++N+ I + K + M T T+ ++ + G A
Sbjct: 222 KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARL 281
Query: 265 CFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGC 324
E+K+ G+ P TY ++ +C +GR A ++ EM G VPD +
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCN-EGR----ASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 325 LCEVGSVLEARKCTDSLKKIGYTVPL--SYSLIIRALCRAGKVEEALALAGEVVGAEKS- 381
G + A D + K G VP +Y+ +I L K+E A L E+ EK
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQG-MVPTFYTYNTLIHGLFMENKIEAAEILIREI--REKGI 393
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
LD VT +I+ + G + A A D M GI+ T YTSLI ++ + +A E
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ E++ G +P++V + L+ G+ + A+++ M + PD TY+ L+ LC
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVV 547
G+ EEA +L+ +M GI P I++ T+ G +++G A +V
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
L E+R + S T+ I+I Y + G A E+ DG P++ TY LI LC
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
+ K +A +++ +++ G PD ++ T + C +G++ A + +
Sbjct: 444 --RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Query: 350 -LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
++Y+ ++R LC GK EEA L GE+ D ++ ++I +KG + A
Sbjct: 502 DVTYNCLMRGLCGEGKFEEARELMGEM-KRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
D M G T+ Y +L+ K ++ A E++ EM+ G PN + ++I N+
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Query: 469 E 469
+
Sbjct: 621 D 621
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 159/350 (45%), Gaps = 9/350 (2%)
Query: 203 GYKHTAESYNLAIK-IAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNM 261
G K T +YN ++ ++ G+ + R + EM+ + +T+ ++ G
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGR-IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---R 310
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A +E+K G P +Y LI C G ++ A EM+ G VP T
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRG-CSNNG-DLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ L + A +++ G + ++Y+++I C+ G ++A AL E++ +
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM-TDG 427
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
Q T S+I+ L RK + +A + + +G+K + + +L+ + +A
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+++EM P+ VT + L+RG + +A + MK +G PD +Y+ L++
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
K G ++ A + +ML G P+ + + + GL++ + +LA +L++
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-TCGSIIHALLRKGRLEDALAKIDA 410
+ L++R C+ V+EA+ + EK + TC I+ L R R+E+A
Sbjct: 158 FDLLVRCCCQLRMVDEAIECF--YLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M + IK ++ + +I KE ++ KA + M+ G +P +VT + L++G+ R
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
A + MK KG PD +TY+ +L+ +C GR+ E ++ +M + G+VP ++++
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNI 332
Query: 531 VFFGLNREGKRDLA 544
+ G + G ++A
Sbjct: 333 LIRGCSNNGDLEMA 346
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 10/284 (3%)
Query: 260 NMAMNCFKE-IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI 318
N N F E + A ++ST + ++ C + R VD+A++ + M G P E
Sbjct: 134 NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC 193
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAG--EV 375
L L + + A + ++ + +++++I LC+ GK+++A G EV
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 376 VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
G + + VT +++ +GR+E A I MK +G + + Y ++ E
Sbjct: 254 FGIKPTI---VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE-- 308
Query: 436 VGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSM 495
G+A E++ EM++ G P+ V+ + LIRG N A+ M +G P F TY+
Sbjct: 309 -GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367
Query: 496 LLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
L+ L + E A LI ++ + GIV ++ + + G + G
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 139/334 (41%), Gaps = 9/334 (2%)
Query: 200 KQPGYKHTAESYNLAIK-IAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGL 258
K G++ ++YN + + G+ + +R EM+ S ++ I+I G
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLR----EMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 259 TNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI 318
MA E+ G P+ TY LI L K++ A + E+ G V D
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN--KIEAAEILIREIREKGIVLDSVTY 400
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPLSYSLIIRALCRAGKVEEALALAGEVVG 377
+ C+ G +A D + G +Y+ +I LCR K EA L +VVG
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
D V +++ G ++ A + + M I Y L+ E +
Sbjct: 461 KGMKP-DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
+A E++ EM++ G +P+ ++ + LI GY A+ V M G P TY+ LL
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 498 TCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
L K E A +L+ +M GIVP+ +F +V
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 186/406 (45%), Gaps = 18/406 (4%)
Query: 150 RILS----SSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYK 205
R+LS S++D + + + E+ + + V E L + L FF+WV ++ G++
Sbjct: 19 RLLSVKPISNVDDAKFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFR 78
Query: 206 HTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE-TWTIMIMLYGRIGLTNMAMN 264
HT E++N I I +F+ L M N V + T+ I+ Y L A++
Sbjct: 79 HTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAID 138
Query: 265 CFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG-HVPDKELIETYLG 323
+ ++ S Y L+ ALC K + L +I G V + ++ L
Sbjct: 139 AYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILR 197
Query: 324 CLCEVGSVLEARKCTDSLKKI---GYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAE 379
++G KC + KK+ G T L SYS+ + +C++GK +A+ L E + +
Sbjct: 198 GWSKLGW---WGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKE-MKSR 253
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
+ LD V ++I A+ +E + M+++G + + + ++I ++ ++ A
Sbjct: 254 RMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDA 313
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+++EM + G +P+ +T L + +E+P + ++F RM G P +TY ML+
Sbjct: 314 YRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRK 370
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
+ G + + + M + G P + + V L ++G D+AR
Sbjct: 371 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAR 416
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 153/385 (39%), Gaps = 44/385 (11%)
Query: 159 SLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIA 218
S IQ+ L I + + V +VL N G ++ FF W ++PG SY++ ++
Sbjct: 102 SAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRAL 161
Query: 219 VSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR 278
K F M ++ M E TI + + R+ A+ F+E ++ G S
Sbjct: 162 GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCST 221
Query: 279 STYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCT 338
++ L L CLCE V A+
Sbjct: 222 ESFNAL-------------------------------------LRCLCERSHVSAAKSVF 244
Query: 339 DSLKKIGYTVPL---SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHAL 395
++ K +P SY+++I + G+VEE + E+V + D ++ +I L
Sbjct: 245 NAKKG---NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGP-DCLSYSHLIEGL 300
Query: 396 LRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNV 455
R GR+ D++ D +K +G +VY ++I +F + ++M M EPN+
Sbjct: 301 GRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNL 360
Query: 456 VTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
T S L+ G + + DA +F M +G P + L LC G AM + K
Sbjct: 361 ETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQK 420
Query: 516 MLDCGIVPSTINFRTVFFGLNREGK 540
G S ++ + L+R GK
Sbjct: 421 SRKAGCRISESAYKLLLKRLSRFGK 445
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 144/322 (44%), Gaps = 19/322 (5%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K + ES+N ++ +++F ++ N P S ++ IMI + ++G
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEVEEM 274
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
KE+ G+ P +Y +LI L GR GR ++D+++++ + + G+VPD + Y
Sbjct: 275 EKVLKEMVESGFGPDCLSYSHLIEGL-GRTGR-INDSVEIFDNIKHKGNVPDANV---YN 329
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPL-------SYSLIIRALCRAGKVEEALALAGEV 375
+C + + AR +S++ + +YS ++ L + KV +AL + E+
Sbjct: 330 AMIC---NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 376 VG-AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
+ + VT S + L G A+ ++ G +++ Y L+ +
Sbjct: 387 LSRGVLPTTGLVT--SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
+ G + + +EMQ+SGY +V ++ G + +A V KG P+ YS
Sbjct: 445 KCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 504
Query: 495 MLLTCLCKVGRSEEAMKLIFKM 516
L + L ++E A KL K+
Sbjct: 505 RLSSKLMASNKTELAYKLFLKI 526
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 153/379 (40%), Gaps = 16/379 (4%)
Query: 187 YGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETW 246
Y H F+W ++H +S+ + + F + L + N P +S +
Sbjct: 92 YAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIF 151
Query: 247 TI---------MIMLYGRIGLTNMAMNCFKEIK--ADGYSPSRSTYKYLIIALCGRKGRK 295
+ I Y R + A+ F +K DG P+ Y ++ K
Sbjct: 152 SCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYV--KSGD 208
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSL 354
+D AL+ Y M PD + C A +K+ G + S++
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
+IR +GK+EE + +A E++ + TC ++ L R+GR++DA + + +
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIEL-GCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
+ + Y SL+ E + +AME++EE+ + G P + C+ L+ G R A
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
+M G PD T+++LL LC S +A +L G P + + G
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSG 447
Query: 535 LNREGKRDLARVVLQQKSD 553
+EG+R V++ + D
Sbjct: 448 FTKEGRRKEGEVLVNEMLD 466
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 153/347 (44%), Gaps = 10/347 (2%)
Query: 195 FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
FS +P ++ ++Y A K+ + F M+ L + P + ++ Y
Sbjct: 151 FSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLI-----DGKPNVG-VYNTVVNGYV 204
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
+ G + A+ ++ + + P T+ LI C + K D AL ++ EM G P+
Sbjct: 205 KSGDMDKALRFYQRMGKERAKPDVCTFNILINGYC--RSSKFDLALDLFREMKEKGCEPN 262
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAG 373
T + G + E K + ++G + +++ LCR G+V++A L
Sbjct: 263 VVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVL 322
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
+++ ++ + GS++ L + + A+ ++ + ++G T+L+ K
Sbjct: 323 DLLN-KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKS 381
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
+ KA +E+M +G P+ VT + L+R + + DA + KG PD TY
Sbjct: 382 GRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTY 441
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+L++ K GR +E L+ +MLD ++P + + GL+ GK
Sbjct: 442 HVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 325 LCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL 383
LC+ G+ + A+ + + G + L+Y+ +I + C +G+ +A L ++ ++ +
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI-EKQINP 78
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
D VT ++I+A +++ ++ +A M + I T Y S+I F K+ +V A ++
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
+ M G P+VVT S LI GY +R + +F M +G + TY+ L+ C+V
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 504 GRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL--NREGKRDLARVVLQQKSD 553
G + A L+ +M+ CG+ P I F + GL +E ++ A + QKS+
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
Query: 222 KDFKHM--RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRS 279
KD H+ +NLF EM T+ MI + G + A + + +P
Sbjct: 22 KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIV 81
Query: 280 TYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTD 339
T+ LI A K RKV +A ++Y EM+ P + + C+ V +A++ D
Sbjct: 82 TFSALINAFV--KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 340 SLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRK 398
S+ G + +++S +I C+A +V+ + + E + + VT ++IH +
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE-MHRRGIVANTVTYTTLIHGFCQV 198
Query: 399 GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
G L+ A ++ M G+ + ++ +K++ KA I+E++Q+S
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 35/210 (16%)
Query: 376 VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
+G D V +I+ L + G +A M ++GI + Y +I F +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 436 VGKAMEIIEEMQQSGYEPNVVTCSALIR-------------------------------- 463
A +++ M + P++VT SALI
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 464 ---GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
G+ +R DA + M KG PD T+S L+ CK R + M++ +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 521 IVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
IV +T+ + T+ G + G D A+ +L +
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 170/377 (45%), Gaps = 7/377 (1%)
Query: 176 FVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMR 235
F+V +L N + + L WV ++ Y + +YN+ ++ + K F LF EMR
Sbjct: 124 FMVSLLSRENDWQRS-LALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMR 182
Query: 236 RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRK 295
+ T++ +I +G+ G+ + A++ ++++ D S Y LI R+
Sbjct: 183 QRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLI--ELSRRLCD 240
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYS 353
A+ ++ + +G PD + + + EAR + + G +P +SYS
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG-VLPNTVSYS 299
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
++ K EAL++ E+ +LD TC +I + +++A ++++
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEV-NCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
I+ + Y +++ + + + G+A+ + MQ+ E NVVT + +I+ Y
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
A N+ M+ +G P+ TYS +++ K G+ + A L K+ G+ + ++T+
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIV 478
Query: 534 GLNREGKRDLARVVLQQ 550
R G A+ +L +
Sbjct: 479 AYERVGLMGHAKRLLHE 495
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 196/454 (43%), Gaps = 48/454 (10%)
Query: 96 LAPEKFSESKKQVFVGIKVEEDVRVD---QLKSEKVDCSLVLPHLKTYSERDVHEVCRIL 152
LAP++++ S G + D + +++ ++V LVL YS ++ E+ R L
Sbjct: 186 LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL-----YS--NLIELSRRL 238
Query: 153 SSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVR------KQPGYKH 206
I +L++S I TP+ V + N YG L F R + G
Sbjct: 239 CDYSKAISIFSRLKRSGI--TPDLVA-YNSMINVYGKAKL--FREARLLIKEMNEAGVLP 293
Query: 207 TAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCF 266
SY+ + + V F ++F EM+ N + T IMI +YG++ + A F
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE----TYL 322
++ P+ +Y ++ +V +++GE I+ + ++ IE TY
Sbjct: 354 WSLRKMDIEPNVVSYNTIL---------RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYN 404
Query: 323 GCLCEVGSVLEARKCTDSLKKIGY----TVPLSYSLIIRALCRAGKVEEALALAGEV--V 376
+ G +E K T+ ++++ ++YS II +AGK++ A L ++
Sbjct: 405 TMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS 464
Query: 377 GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQV 436
G E +DQV ++I A R G + A + +K + I T++ + K +
Sbjct: 465 GVE---IDQVLYQTMIVAYERVGLMGHAKRLLHELK---LPDNIPRETAITI-LAKAGRT 517
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
+A + + +SG ++ +I Y +R ++ VF +M+ G FPD +M+
Sbjct: 518 EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 577
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCG-IVPSTINFR 529
L K E+A + +M + G + P ++F+
Sbjct: 578 LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ 611
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 140/285 (49%), Gaps = 5/285 (1%)
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
++++ +G+ P TY L+ + C R+GR + +A +Y M VPD + + L
Sbjct: 259 LEKMEEEGFEPDLVTYNTLVSSYC-RRGR-LKEAFYLYKIMYRRRVVPDLVTYTSLIKGL 316
Query: 326 CEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLD 384
C+ G V EA + + G +SY+ +I A C+ G ++++ L E++G D
Sbjct: 317 CKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP-D 375
Query: 385 QVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
+ TC I+ +R+GRL A+ + +++ + + V LIV +E + A +++
Sbjct: 376 RFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLD 435
Query: 445 EM-QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
+ ++ G+E T + LI + +A + ++K + D +TY L+ CLC++
Sbjct: 436 RIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRI 495
Query: 504 GRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
GR+ EA L+ +M D + P + + +G +E D A +L
Sbjct: 496 GRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 174/410 (42%), Gaps = 30/410 (7%)
Query: 133 VLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEF----VVEVLQICNKYG 188
+LP + S + V +C L+ S D+S++ L P + VL
Sbjct: 36 LLPQSQNPS-KIVDVICSTLNHS-DYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDA 93
Query: 189 HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM------------RR 236
+ FF WV+ G + +Y L + I VS K F E+ R
Sbjct: 94 SRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFR 153
Query: 237 NNYPVTSE------TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCG 290
T E + +++ Y ++GL F+E+ G+S S T +L+ L
Sbjct: 154 VLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGL-- 211
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL 350
K ++D ++Y M G P+ C + E + +++ G+ L
Sbjct: 212 LKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDL 271
Query: 351 -SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+Y+ ++ + CR G+++EA L +++ + D VT S+I L + GR+ +A
Sbjct: 272 VTYNTLVSSYCRRGRLKEAFYLY-KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFH 330
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M +GIK Y +LI + KE + ++ +++ EM + P+ TC ++ G++
Sbjct: 331 RMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREG 390
Query: 470 RPIDAWNVFYRM-KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
R + A N + +LK P FE L+ LC+ G+ A L+ ++++
Sbjct: 391 RLLSAVNFVVELRRLKVDIP-FEVCDFLIVSLCQEGKPFAAKHLLDRIIE 439
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
P+ + ++++ + G VEE + EV+ + S+ VTC +++ LL+ +ED
Sbjct: 166 PVVFDMLVKGYLKLGLVEEGFRVFREVLDS-GFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
M + GI + + L F + + + +E+M++ G+EP++VT + L+ Y
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
R +A+ ++ M + PD TY+ L+ LCK GR EA + +M+D GI P +++
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 529 RTVFFGLNREGKRDLARVVLQQ 550
T+ + +EG ++ +L +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHE 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 106/264 (40%), Gaps = 6/264 (2%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K SYN I + + L EM N+ T +++ + R G A
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+N E++ +LI++LC ++G+ + + GH E +
Sbjct: 396 VNFVVELRRLKVDIPFEVCDFLIVSLC-QEGKPFAAKHLLDRIIEEEGHEAKPETYNNLI 454
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
L ++ EA LK + +Y +I LCR G+ EA +L E+ +E
Sbjct: 455 ESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG--KA 439
D CG++++ ++ + A + + Y SL V E G KA
Sbjct: 515 P-DSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSL-VKAVCETGCGYKKA 572
Query: 440 MEIIEEMQQSGYEPNVVTCSALIR 463
+E+ E MQ+ G+ PN +TC LI+
Sbjct: 573 LELQERMQRLGFVPNRLTCKYLIQ 596
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 66/377 (17%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM-RRNNYPVTSET--WTI 248
L FF WV + G+ H +S+ L ++ ++ RN F + RR+N V + +
Sbjct: 85 LRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNS 143
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC--GRKGRKVDDALKMYGEM 306
+I YG GL ++ F+ +K G SPS T+ L+ L GR G D ++ EM
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHD----LFDEM 199
Query: 307 INA-GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAG 363
G PD T + C+ V EA + + ++ + P ++Y+ II LCRAG
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM-ELYHCNPDVVTYNTIIDGLCRAG 258
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
KV+ A +++ +L+K + + Y
Sbjct: 259 KVKIA--------------------HNVLSGMLKKA--------------TDVHPNVVSY 284
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER----------PID 473
T+L+ + ++++ +A+ + +M G +PN VT + LI+G R D
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
A+ F PD T+++L+ C G + AMK+ +ML+ + P + ++ +
Sbjct: 345 AFTTFA--------PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 534 GLNREGKRDLARVVLQQ 550
L + D A + +
Sbjct: 397 TLCMRNEFDRAETLFNE 413
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 152/382 (39%), Gaps = 54/382 (14%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG--RIG 257
KQ G + ++N + I + +LF EMRR Y VT +++T ++ G +
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT-YGVTPDSYTFNTLINGFCKNS 223
Query: 258 LTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR----------------------- 294
+ + A FK+++ +P TY +I LC R G+
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC-RAGKVKIAHNVLSGMLKKATDVHPNVV 282
Query: 295 -------------KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKC---- 337
++D+A+ ++ +M++ G P+ T + L E E +
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342
Query: 338 TDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLR 397
D+ +++++I+A C AG ++ A+ + E++ K D + +I L
Sbjct: 343 NDAFTTFAPDA-CTFNILIKAHCDAGHLDAAMKVFQEMLNM-KLHPDSASYSVLIRTLCM 400
Query: 398 KGRLEDALAKIDAMKQQGI-------KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+ + A + + ++ + K Y + + + +A ++ ++ + G
Sbjct: 401 RNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG 460
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+ + + LI G+ + A+ + M + PD ETY +L+ L K+G + A
Sbjct: 461 VQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAH 519
Query: 511 KLIFKMLDCGIVPSTINFRTVF 532
+ +ML +P F +V
Sbjct: 520 DTLQRMLRSSYLPVATTFHSVL 541
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 152/346 (43%), Gaps = 4/346 (1%)
Query: 195 FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
F P ++ E+ N + S L M R+N + + ++
Sbjct: 91 FGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLA 150
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
RI + AM + + G P TY +I LC +KG + AL + +M +G PD
Sbjct: 151 RIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLC-KKGH-IRTALVLLEDMSLSGSPPD 208
Query: 315 KELIETYLGCLCEVGSVLEA-RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAG 373
T + C+ + G+ +A R D L+ ++Y++++ +CR A+ +
Sbjct: 209 VITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVL- 267
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
E + E D VT S+++ R+G LE+ + I + G++L Y +L+
Sbjct: 268 EDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSH 327
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
+ + EI+ M Q+ Y P V+T + LI G A + FY+M + PD TY
Sbjct: 328 EYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+ +L + K G ++A++L+ + + P I + +V GL ++G
Sbjct: 388 NTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKG 433
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 148/331 (44%), Gaps = 4/331 (1%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
+YN I+ + + + + +N P T+T+++ L R + A+ +++
Sbjct: 211 TYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDM 270
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
+G P TY L+ C R+G +++ + +++ G + T L LC
Sbjct: 271 AVEGCYPDIVTYNSLVNYNC-RRG-NLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE 328
Query: 330 SVLEARKCTDSLKKIGYT-VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
E + + + + Y ++Y+++I LC+A + A+ +++ +K D VT
Sbjct: 329 YWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML-EQKCLPDIVTY 387
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
+++ A+ ++G ++DA+ + +K + Y S+I K+ + KA+E+ +M
Sbjct: 388 NTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLD 447
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
+G P+ +T +LI G+ +A V +G TY +++ LCK E
Sbjct: 448 AGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEM 507
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
A++++ ML G P + + G+ G
Sbjct: 508 AIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 160/362 (44%), Gaps = 40/362 (11%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
+F EMR ++Y V S + I + R +A + ++K G+S TY I LC
Sbjct: 31 VFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLC 90
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLC---EVGSVLEARKCTDSLKK--- 343
K + DAL +M G +PD YL LC +VG ++ C +
Sbjct: 91 KVKKFDLIDAL--LSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPD 148
Query: 344 -IGYTVPLS--------------YSLIIRA---------------LCRAGKVEEALALAG 373
+ YT+ ++ ++ +IR+ LC A KV+ A +
Sbjct: 149 VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVA 208
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
E + + + L V ++I + GR+E A A M + G + + Y L+ +++
Sbjct: 209 EEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDN 268
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR-MKLKGPFPDFET 492
+ +A ++ EM +SG + + + + L++ + V P +N + M+ +G F D +
Sbjct: 269 NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVS 327
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKS 552
YS L+ C+ + +A +L +M G+V + + + ++ REG +A+ +L Q +
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 553 DL 554
+L
Sbjct: 388 EL 389
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 140/359 (38%), Gaps = 38/359 (10%)
Query: 231 FFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCG 290
FF M + ++TI+I R G A+ + + G SP L++ LC
Sbjct: 137 FFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC- 195
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELI-ETYLGCLCEVGSVLEARKCTDSLKKIG---- 345
RKVD A +M E I + V ++ + C+ G + +A + KIG
Sbjct: 196 -HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPD 254
Query: 346 ---YTVPLSYSLIIRALCRAGKVEEALALAGEVVGA------------------------ 378
Y V L+Y L RA V + +G + A
Sbjct: 255 LVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMV 314
Query: 379 ----EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
+ D V+ ++I R A + M+Q+G+ + + YTSLI F +E
Sbjct: 315 KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREG 374
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
A +++++M + G P+ + + ++ A+ VF M PD +Y+
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
L++ LC+ GR EA+KL M P + F+ + GL R K A V Q D
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 156/386 (40%), Gaps = 50/386 (12%)
Query: 197 WVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRI 256
W K G+ +Y+ I K F + L +M + + + + L R
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
A+ F + G P +Y LI L R G KV DA++++ MI +G PD +
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLF-RAG-KVTDAVEIWNAMIRSGVSPDNK 185
Query: 317 LIETYLGCLCEVGSV-----LEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALAL 371
+ LC V + A + + K+ V Y+ +I C+AG++E+A AL
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV---YNALISGFCKAGRIEKAEAL 242
Query: 372 AGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY------ 423
+ +G E D VT +++ L+ A + M + GI+L + Y
Sbjct: 243 KSYMSKIGCEP---DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
Query: 424 -----------------------------TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
++LI F + KA + EEM+Q G N
Sbjct: 300 HCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN 359
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
VVT ++LI+ ++ A + +M G PD Y+ +L LCK G ++A +
Sbjct: 360 VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFN 419
Query: 515 KMLDCGIVPSTINFRTVFFGLNREGK 540
M++ I P I++ ++ GL R G+
Sbjct: 420 DMIEHEITPDAISYNSLISGLCRSGR 445
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 6/279 (2%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P+ Y +I C K +++A ++ E+ G +P E T + C+ G +
Sbjct: 235 GCIPNIVFYNTIIGGYC--KLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292
Query: 333 EARKCTDSLKKIGYTVPLSY-SLIIRALCRAG-KVEEALALAGEVVGAEKSSLDQVTCGS 390
+ + +K+ G V + + + II A R G KV+ A ++ G ++ A D T
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWII-ANDCKPDVATYNI 350
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I+ L ++G+ E A+ +D ++G+ Y LI + K K+ A +++ +M + G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+P++VT LI G + DA N+ ++ +G PD Y+ML++ LCK GR A
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
L +MLD I+P + T+ G R G D AR V
Sbjct: 471 LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 144/377 (38%), Gaps = 54/377 (14%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
SY I+ K++ L +M T+ I+I G + A+N ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
G SP + Y L+ LC + GR + L ++ EM++ +PD + T + G
Sbjct: 442 IDRGVSPDAAIYNMLMSGLC-KTGRFLPAKL-LFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 330 SVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
EARK + G V + ++ +I+ CR+G ++EALA + E D+ T
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM-NEEHLVPDKFTY 558
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
+II +++ + A+ M++ K + YTSLI F + A E +EMQ
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Query: 449 SGYEPNVVTCSALIRGYM----NVERPIDAWNV--------------------------- 477
PNVVT + LIR +E+ + W +
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGK 678
Query: 478 -------------------FYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
F+RMK G Y+ L CLC G + A KM+
Sbjct: 679 VLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVK 738
Query: 519 CGIVPSTINFRTVFFGL 535
G P ++F + G
Sbjct: 739 KGFSPDPVSFAAILHGF 755
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 181/453 (39%), Gaps = 53/453 (11%)
Query: 145 VHEVCRILSSSMDWS-LIQEKLEKSAIRFT--PEFVVEVLQICNKYGHNVLNFFSWVRKQ 201
V + IL + +WS ++ + +RF FV + +Q + G + F W+ +
Sbjct: 35 VSDTVSILKTQQNWSQILDDCFADEEVRFVDISPFVFDRIQDV-EIG---VKLFDWLSSE 90
Query: 202 PGYKHTAESYNLA--IKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
+ + + + +K+ + F + ++ +R N +T E + ++ Y G
Sbjct: 91 KKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSL 150
Query: 260 NMAMNCFKEIKADGYS--PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD--- 314
+ A+ + + + Y P L+ L K R++ DA K+Y EM + G D
Sbjct: 151 SKAVEIYDYV-VELYDSVPDVIACNSLLSLLV--KSRRLGDARKVYDEMCDRGDSVDNYS 207
Query: 315 -----------------KELIE---------------TYLGCLCEVGSVLEARKCTDSLK 342
++LIE T +G C++G + A LK
Sbjct: 208 TCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 343 KIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-TCGSIIHALLRKGR 400
G+ L ++ +I C+ G + L EV E+ V +II A R G
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV--KERGLRVSVWFLNNIIDAKYRHGY 325
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
D I + K + Y LI KE + A+ ++E + G PN ++ +
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
LI+ Y + A + +M +G PD TY +L+ L G ++A+ + K++D G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 521 IVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
+ P + + GL + G+ A+++ + D
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 6/296 (2%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ I+I + G +A+ E G P+ +Y LI A C K ++ D A K+
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC--KSKEYDIASKLLL 404
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAG 363
+M G PD + L G + +A L G + + Y++++ LC+ G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 364 KVEEALALAGEVVGAEKSSL-DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
+ A L E++ +++ L D ++I +R G ++A ++G+K+ +
Sbjct: 465 RFLPAKLLFSEML--DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
+ ++I F + + +A+ + M + P+ T S +I GY+ + A +F M+
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
P+ TY+ L+ C G + A + +M +VP+ + + T+ L +E
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 145/384 (37%), Gaps = 78/384 (20%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCG--------------- 290
+ +I Y ++G A FKE+K G+ P+ T+ +I C
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 291 -------------------RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
R G KVD A + G +I PD + LC+ G
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 332 LEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKS-SLDQVTC 388
A D K G +P LSY+ +I+A C++ + + A L ++ AE+ D VT
Sbjct: 362 EVAVGFLDEASKKGL-IPNNLSYAPLIQAYCKSKEYDIASKLLLQM--AERGCKPDIVTY 418
Query: 389 GSIIHALLRKGRLEDAL--------------AKIDAMKQQGIKLT--------------- 419
G +IH L+ G ++DA+ A I M G+ T
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 420 ------IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
+VY +LI F + +A ++ + G + +VV +A+I+G+ +
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
A RM + PD TYS ++ K A+K+ M P+ + + ++
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598
Query: 534 GLNREGKRDLARVVLQ--QKSDLI 555
G +G +A + Q DL+
Sbjct: 599 GFCCQGDFKMAEETFKEMQLRDLV 622
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 173/396 (43%), Gaps = 23/396 (5%)
Query: 163 EKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGK 222
E L ++ F+ E + +L+ L F+ KQ ++ ++Y + I +
Sbjct: 59 EALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRAR 118
Query: 223 DFKHMRNLFFEMRRNN----------------YPVTSETWTIMIMLYGRIGLTNMAMNCF 266
+++ ++ E+ N + + + +++ +Y GL A++ F
Sbjct: 119 NYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVF 178
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLC 326
+ G PS + L+ L RKG AL +Y +MI+ PD + C
Sbjct: 179 DNMGNYGRIPSLLSCNSLLSNLV-RKGENFV-ALHVYDQMISFEVSPDVFTCSIVVNAYC 236
Query: 327 EVGSVLEA---RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL 383
G+V +A K T+S + V ++Y+ +I G VE + ++ S
Sbjct: 237 RSGNVDKAMVFAKETESSLGLELNV-VTYNSLINGYAMIGDVE-GMTRVLRLMSERGVSR 294
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
+ VT S+I +KG +E+A + +K++ + H+Y L+ + + Q+ A+ +
Sbjct: 295 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 354
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
+ M + G N C++LI GY + ++A +F RM PD TY+ L+ C+
Sbjct: 355 DNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA 414
Query: 504 GRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
G +EA+KL +M +VP+ + + + G +R G
Sbjct: 415 GYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 110/514 (21%), Positives = 212/514 (41%), Gaps = 67/514 (13%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G+ + EA +IF M +KP +Y + C+A ++ LK+ D+M +
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK--KQVFV------GI 112
+ ++ ++ G F + +M + ++ S S + +F +
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 113 KVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRF 172
K+ E+V L ++ + ++++ L + V+E IL + + R
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEK--VNEAKEILDNV------------NIFRC 537
Query: 173 TPEFVVEVLQICNKYGHNVLNF-----FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHM 227
P V+ Q + + V N ++ G T E YN I A + +
Sbjct: 538 KP--AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKV 595
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA-MNCFKEIKADGYSPSRSTYKYLII 286
+L E+R T T+ +I + IG+ + A CF+ I+ G + L +
Sbjct: 596 ADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK-GIT--------LNV 646
Query: 287 ALCGRKGR------KVDDALKMYGEMIN-----AGHVPDKELIETYLGCLCEVGSVLEAR 335
+C + K+D+A + ++++ G+ KE +E + L+ +
Sbjct: 647 NICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA------SATTCLKTQ 700
Query: 336 KCTDSL-----KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGS 390
K +S+ KK+ + Y++ I LC+AGK+E+A L +++ +++ D+ T
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+IH G + A D M +GI I Y +LI K V +A ++ ++ Q G
Sbjct: 761 LIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG 820
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
PN +T + LI G + + NV M+LK
Sbjct: 821 ITPNAITYNTLIDGL------VKSGNVAEAMRLK 848
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 45/329 (13%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+T +I Y + GL A + F+ +K + Y L+ C R G ++ DA++++
Sbjct: 298 TYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC-RTG-QIRDAVRVHD 355
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTD-----SLKKIGYTVPLSYSLIIRAL 359
MI G + + + + C+ G ++EA + SLK +T Y+ ++
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT----YNTLVDGY 411
Query: 360 CRAGKVEEALALAGEV---------------------VGAEKSSL-------------DQ 385
CRAG V+EAL L ++ +GA L D+
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
++C +++ AL + G +A+ + + +G+ +I K ++V +A EI++
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
+ +P V T AL GY V +A+ V M+ KG FP E Y+ L++ K
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH 591
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
+ L+ ++ G+ P+ + + G
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITG 620
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 26/297 (8%)
Query: 235 RRNNYPVTSE--TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
R N++ + + T+ ++ Y R G + A+ ++ P+ TY L+ R
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY-SRI 449
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPLS 351
G D L ++ M+ G D+ T L L ++G EA K +++ G T ++
Sbjct: 450 G-AFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV----------TCGSIIHALLRKGRL 401
+++I LC+ KV EA K LD V T ++ H + G L
Sbjct: 509 LNVMISGLCKMEKVNEA-----------KEILDNVNIFRCKPAVQTYQALSHGYYKVGNL 557
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
++A A + M+++GI TI +Y +LI FK + + K +++ E++ G P V T AL
Sbjct: 558 KEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGAL 617
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
I G+ N+ A+ + M KG + S + L ++ + +EA L+ K++D
Sbjct: 618 ITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 143/311 (45%), Gaps = 11/311 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKAD-GYSPSRSTYKYLI--IALCGRKGRKVDDALK 301
T +I++ Y R G + AM KE ++ G + TY LI A+ G + L+
Sbjct: 227 TCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG-DVEGMTRVLR 285
Query: 302 MYGEM-INAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRAL 359
+ E ++ V LI+ Y C+ G + EA + LK+ Y +++
Sbjct: 286 LMSERGVSRNVVTYTSLIKGY----CKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 341
Query: 360 CRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
CR G++ +A+ + ++ + + C S+I+ + G+L +A M +K
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRT-NTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
H Y +L+ + + V +A+++ ++M Q P V+T + L++GY + D +++
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
M +G D + S LL L K+G EAMKL +L G++ TI + GL +
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 540 KRDLARVVLQQ 550
K + A+ +L
Sbjct: 521 KVNEAKEILDN 531
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ-GIKLT 419
R G+ AL + +++ E S D TC +++A R G ++ A+ + G++L
Sbjct: 202 RKGENFVALHVYDQMISFEVSP-DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
+ Y SLI + V ++ M + G NVVT ++LI+GY +A +VF
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+K K D Y +L+ C+ G+ +A+++ M++ G+ +T ++ G + G
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 540 KRDLARVVLQQKSD 553
+ A + + +D
Sbjct: 381 QLVEAEQIFSRMND 394
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 118/584 (20%), Positives = 225/584 (38%), Gaps = 54/584 (9%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G+ + ++ + M +G+ +YT IK CK E+ V + ++ K
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVG-IKVEEDVR 119
+ ++ ++ G+ +++ V+ ++ + + G K + V
Sbjct: 327 LVADQHMYGVLMDGYCRTGQ--IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 120 VDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVE 179
+Q+ S D SL P TY+ V CR L + +K + + +
Sbjct: 385 AEQIFSRMNDWSLK-PDHHTYNTL-VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI- 441
Query: 180 VLQICNKYG--HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN 237
+L+ ++ G H+VL+ + + K+ G S + ++ DF L+ +
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKR-GVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 238 NYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVD 297
+ T +MI ++ N A + P+ TY+ L K
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 298 DALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLII 356
A+K Y E G P E+ T + + + + L+ G T + +Y +I
Sbjct: 561 FAVKEYME--RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI 618
Query: 357 RALCRAGKVEEALALAGEVVGAEKS-SLDQVTCGSIIHALLRKGRLEDA---LAKI---- 408
C G +++A A E++ EK +L+ C I ++L R ++++A L KI
Sbjct: 619 TGWCNIGMIDKAYATCFEMI--EKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFD 676
Query: 409 ------------------DAMKQQGIKLTIH-------------VYTSLIVHFFKEKQVG 437
+K Q I ++ VY I K ++
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 736
Query: 438 KAMEIIEEMQQSG-YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
A ++ ++ S + P+ T + LI G A+ + M LKG P+ TY+ L
Sbjct: 737 DARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+ LCK+G + A +L+ K+ GI P+ I + T+ GL + G
Sbjct: 797 IKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 147/320 (45%), Gaps = 3/320 (0%)
Query: 195 FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
F + +QP ++H+ S+ + I G+ F + ++ + R + YP+T E +T +I +Y
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
L ++ F ++ ++P ++ L +G + A +++ G +P+
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY-LQKAFELFKSSRLHGVMPN 189
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAG 373
+ C + A + + + + SY ++I+ CR G+V A+ L
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
+++ + D+++ +++++L RK +L +A + MK +G + Y ++I+ F +E
Sbjct: 250 DMLN-KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
+ A +++++M +G PN V+ LI G + + M KG P F
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS 368
Query: 494 SMLLTCLCKVGRSEEAMKLI 513
+ L+ C G+ EEA ++
Sbjct: 369 NCLVKGFCSFGKVEEACDVV 388
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%)
Query: 398 KGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT 457
+G L+ A + + G+ Y L+ F + A ++ +M + P+V +
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 458 CSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML 517
LI+G+ + A + M KG PD +Y+ LL LC+ + EA KL+ +M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 518 DCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
G P +++ T+ G RE + AR VL
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 320
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 165/350 (47%), Gaps = 18/350 (5%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNM- 261
G K + S N + + + + F + + F+ + ++ +T +T +++ ++
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRF-DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIE 208
Query: 262 -AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIET 320
A EI + G P+ TY ++ R ++ A ++ EM++ G PD
Sbjct: 209 SAYKVLDEIPSMGLVPNLVTYTTILGGYVARG--DMESAKRVLEEMLDRGWYPDATTYTV 266
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGA 378
+ C++G EA D ++K P ++Y ++IRALC+ K EA + E++
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEK-NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML-- 323
Query: 379 EKSSL-DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
E+S + D C +I AL ++++A M + + ++LI KE +V
Sbjct: 324 ERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVT 383
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA---WNVFYRMKLKGPFPDFETYS 494
+A ++ +E ++ G P+++T + LI G +A W+ Y K K P+ TY+
Sbjct: 384 EARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCK---PNAFTYN 439
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
+L+ L K G +E ++++ +ML+ G P+ F +F GL + GK + A
Sbjct: 440 VLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 12/292 (4%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
+Y + V+ D + + + EM + + T+T+++ Y ++G + A ++
Sbjct: 228 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
+ + P+ TY +I ALC K +K +A M+ EM+ +PD L + LCE
Sbjct: 288 EKNEIEPNEVTYGVMIRALC--KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDH 345
Query: 330 SVLEA----RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQ 385
V EA RK LK S +I LC+ G+V EA L E SL
Sbjct: 346 KVDEACGLWRK---MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSL-- 400
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
+T ++I + KG L +A D M ++ K Y LI K V + + ++EE
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
M + G PN T L G + + DA + + G D E++ + L
Sbjct: 461 MLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESWELFL 511
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 145/356 (40%), Gaps = 42/356 (11%)
Query: 199 RKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML---YGR 255
+ PG+ H ++Y+ + + F + +L ++R N+YP + I L YG
Sbjct: 74 KSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLR-NSYPPIKCGENLFIDLLRNYGL 132
Query: 256 IGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDK 315
G +M F I G S + L+ L + ++ D M+
Sbjct: 133 AGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLI--QNQRFDLVHAMF------------ 178
Query: 316 ELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGE 374
+S + G T + + +L+++ALC+ +E A + E
Sbjct: 179 ----------------------KNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 375 VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEK 434
+ + VT +I+ + +G +E A ++ M +G YT L+ + K
Sbjct: 217 IPSMGLVP-NLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 435 QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
+ +A ++++M+++ EPN VT +IR ++ +A N+F M + PD
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
++ LC+ + +EA L KML +P T+ L +EG+ AR + +
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 185/424 (43%), Gaps = 35/424 (8%)
Query: 147 EVCRIL-SSSMDWSLIQE---KLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRK-Q 201
++C +L +S+ +L Q L+ ++I + V+++L+ + L+FF W +
Sbjct: 26 QLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLR 85
Query: 202 PGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNM 261
PGYKH+A +Y+ + + +L M+ + + I++ R G
Sbjct: 86 PGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFES 145
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA--GHVPD---KE 316
A+ ++ G + S Y ++IAL + ++ AL + +++ A H D +
Sbjct: 146 ALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL--ALSILFKLLEASDNHSDDDTGRV 203
Query: 317 LIETYLGCLCEVGSVLEARKCTD-------------SLKKIGYTVPLSYSLIIRALCRAG 363
+I +YL V +L + D +K+ + SY++ I G
Sbjct: 204 IIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDT-WSYNICIHGFGCWG 262
Query: 364 KVEEALALAGEVVGAEKSSL-------DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
++ AL+L E+ E+SS+ D T S+IH L G+ +DAL D +K G
Sbjct: 263 DLDAALSLFKEM--KERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH 320
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWN 476
+ Y LI K ++ AM I EMQ +G+ P+ + + L+ G + + +A
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ 380
Query: 477 VFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLN 536
+F +M +G TY++L+ L + GR+E L + G I F V L
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 537 REGK 540
REGK
Sbjct: 441 REGK 444
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 32/319 (10%)
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE------TWTIMIMLYGRIG 257
+K SYN+ I D +LF EM+ + S T+ +I + G
Sbjct: 244 FKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFG 303
Query: 258 LTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKEL 317
A+ + E+K G+ P STY+ LI C K ++DDA+++YGEM G VPD +
Sbjct: 304 KAKDALIVWDELKVSGHEPDNSTYRILIQGCC--KSYRMDDAMRIYGEMQYNGFVPDTIV 361
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-------LSYSLIIRALCRAGKVEEALA 370
C + L+ARK T++ + V +Y+++I L R G+ E
Sbjct: 362 YN------CLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFT 415
Query: 371 LAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF 430
L ++ + +D +T + L R+G+LE A+ ++ M+ +G + + +SL++ F
Sbjct: 416 LFCDL-KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Query: 431 FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
K+ + ++++ +++ PNV+ +A + +++RP + K K P F
Sbjct: 475 HKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEA--SLKRP--------QSKDKDYTPMF 524
Query: 491 ETYSMLLTCLCKVGRSEEA 509
+ L + VG ++
Sbjct: 525 PSKGSFLDIMSMVGSEDDG 543
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 373 GEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI-KLTIHVYTSLIVHFF 431
G+ V A+ S D + + L KG L A + G+ LT + Y S++ F
Sbjct: 582 GQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFV 641
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFE 491
K+ A ++++M ++ ++ T + +I+G + R A V R+ +G + D
Sbjct: 642 KKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIV 701
Query: 492 TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
Y+ L+ L K R +EA +L M GI P +++ T+ ++ GK
Sbjct: 702 MYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%)
Query: 377 GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQV 436
G + L T S++ + ++KG + A +D M + I Y +I K +
Sbjct: 622 GMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRA 681
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
A +++ + + G ++V + LI R +A +F MK G PD +Y+ +
Sbjct: 682 DLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTM 741
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
+ K G+ +EA K + MLD G +P+ +
Sbjct: 742 IEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 6/281 (2%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A F+EI G P Y +I C + D A + +G ++ +G+ P
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLG--RTDKAFQYFGALLKSGNPPSLTTSTIL 449
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+G GS+ +A ++K G + + +Y+ ++ + ++ + L E+ A
Sbjct: 450 IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI 509
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
S D T +IH+++ +G +++A I + ++G + +T +I F K +A
Sbjct: 510 SP-DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+ M +P+VVTCSAL+ GY +R A +F ++ G PD Y+ L+
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
C VG E+A +LI M+ G++P+ + GL EGKR
Sbjct: 629 CSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL--EGKR 667
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 175/449 (38%), Gaps = 85/449 (18%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGK-DFKHM--------------RNLFFEMR 235
VL FF W G +H++ S + I I VSG +++ + R+L M+
Sbjct: 129 VLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMK 188
Query: 236 -----RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYL---IIA 287
R + V ++I+I R NMA+ ++ G PSR L I+
Sbjct: 189 DLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILR 248
Query: 288 LCG------------RKGRKVDDAL------------------KMYGEMINAGHVPDKEL 317
+ G +GR ++ A+ ++ M + G PD
Sbjct: 249 VHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA 308
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALAL----- 371
++ LC+ G + EA LK G + +S S +I C+ GK EEA+ L
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 372 -----------------AGEVVGA--------EKSSLDQVTC-GSIIHALLRKGRLEDAL 405
G+++ A E L C ++I GR + A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
A+ + G ++ T LI + + A + M+ G + +VVT + L+ GY
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
+ + + M+ G PD TY++L+ + G +EA ++I +++ G VPST
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 526 INFRTVFFGLNREGKRDLARVVLQQKSDL 554
+ F V G ++ G A ++ +DL
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 37/236 (15%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
++F M+ + T+ ++ YG+ N E+++ G SP +TY LI ++
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
R +D+A ++ E+I G VP
Sbjct: 524 VVRG--YIDEANEIISELIRRGFVPS---------------------------------- 547
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
L+++ +I + G +EA L + D VTC +++H + R+E A+
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP-DVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
+ + G+K + +Y +LI + + KA E+I M Q G PN T AL+ G
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 6/281 (2%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A F+EI G P Y +I C + D A + +G ++ +G+ P
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLG--RTDKAFQYFGALLKSGNPPSLTTSTIL 449
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+G GS+ +A ++K G + + +Y+ ++ + ++ + L E+ A
Sbjct: 450 IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI 509
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
S D T +IH+++ +G +++A I + ++G + +T +I F K +A
Sbjct: 510 SP-DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
+ M +P+VVTCSAL+ GY +R A +F ++ G PD Y+ L+
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
C VG E+A +LI M+ G++P+ + GL EGKR
Sbjct: 629 CSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL--EGKR 667
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 175/449 (38%), Gaps = 85/449 (18%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGK-DFKHM--------------RNLFFEMR 235
VL FF W G +H++ S + I I VSG +++ + R+L M+
Sbjct: 129 VLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMK 188
Query: 236 -----RNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYL---IIA 287
R + V ++I+I R NMA+ ++ G PSR L I+
Sbjct: 189 DLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILR 248
Query: 288 LCG------------RKGRKVDDAL------------------KMYGEMINAGHVPDKEL 317
+ G +GR ++ A+ ++ M + G PD
Sbjct: 249 VHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA 308
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALAL----- 371
++ LC+ G + EA LK G + +S S +I C+ GK EEA+ L
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 372 -----------------AGEVVGA--------EKSSLDQVTC-GSIIHALLRKGRLEDAL 405
G+++ A E L C ++I GR + A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
A+ + G ++ T LI + + A + M+ G + +VVT + L+ GY
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
+ + + M+ G PD TY++L+ + G +EA ++I +++ G VPST
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 526 INFRTVFFGLNREGKRDLARVVLQQKSDL 554
+ F V G ++ G A ++ +DL
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 37/236 (15%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
++F M+ + T+ ++ YG+ N E+++ G SP +TY LI ++
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
R +D+A ++ E+I G VP
Sbjct: 524 VVRG--YIDEANEIISELIRRGFVPS---------------------------------- 547
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
L+++ +I + G +EA L + D VTC +++H + R+E A+
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP-DVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
+ + G+K + +Y +LI + + KA E+I M Q G PN T AL+ G
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 7/276 (2%)
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN--AGHVPDKELIETYLGCLC 326
++ G PS T+ LI KG ++D+A+++ M N + D + + C
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFV-EKG-EMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFC 182
Query: 327 EVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLD 384
++G A +S G VP ++Y+ ++ ALC+ GKV+E L + E D
Sbjct: 183 KIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRL-EDEGFEFD 241
Query: 385 QVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
V + IH + G L DAL + M ++G+ + Y+ LI KE V +A+ ++
Sbjct: 242 CVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
+M + G EPN++T +A+IRG + + +A+ +F R+ G D Y L+ +C+ G
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 505 RSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
A ++ M GI PS + + TV GL G+
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGR 397
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 10/236 (4%)
Query: 299 ALKMYGEMINAGH--VPDKELIE--TYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYS 353
+L Y ++NAG + ++I+ + LC+ G +++A K G T+ ++Y+
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 694
Query: 354 LIIRALCRAGKVEEALAL--AGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
+I LC+ G + EAL L + E +G S +VT G +I L ++G DA +D+M
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPS---EVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+G+ I +Y S++ + K Q AM ++ P+ T S++I+GY
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
+A +VF K K DF + L+ C GR EEA L+ +ML V IN
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLIN 867
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+ Y++II LC+ G + +AL L + +L+ +T S+I+ L ++G L +AL D
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLC-SFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
+++ G+ + Y LI + KE A ++++ M G PN++ ++++ GY +
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+ DA V R + PD T S ++ CK G EEA+ + + D I F
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 530 TVFFGLNREGKRDLARVVLQQ 550
+ G +G+ + AR +L++
Sbjct: 835 FLIKGFCTKGRMEEARGLLRE 855
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 118/570 (20%), Positives = 231/570 (40%), Gaps = 46/570 (8%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G ++ EA + M +G++P +YT I+ LCK + E+ + + + +
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 61 IAIRDEVFHWVITYLENKGE----FAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEE 116
I + + ++ +I + KG F++ ++Q + ++ + + +V E
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT--YNTVINGLCMAGRVSE 400
Query: 117 DVRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEF 176
V + V+ + TYS +L S + I LE RF
Sbjct: 401 ADEVSKG---------VVGDVITYST--------LLDSYIKVQNIDAVLEIRR-RFLEAK 442
Query: 177 VVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAE--------SYNLAIKIAVSGKDFKHMR 228
+ L +CN L ++ Y+ E +Y IK +
Sbjct: 443 IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+F E+R+++ + + +I + G+ + A E+ G T + L+ ++
Sbjct: 503 EMFNELRKSSVS-AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI 561
Query: 289 CGRKGRKVDDALKMYG-EMINA----GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
G K L +YG E +N+ G + D L+ LC+ GS A + +++
Sbjct: 562 HANGGDKGILGL-VYGLEQLNSDVCLGMLNDAILL------LCKRGSFEAAIEVYMIMRR 614
Query: 344 IGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLED 403
G TV S I++ L + +A L SS+D + II+ L ++G L
Sbjct: 615 KGLTVTFP-STILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVK 673
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
AL K +G+ L Y SLI ++ + +A+ + + ++ G P+ VT LI
Sbjct: 674 ALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILID 733
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
+DA + M KG P+ Y+ ++ CK+G++E+AM+++ + + + P
Sbjct: 734 NLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTP 793
Query: 524 STINFRTVFFGLNREGKRDLARVVLQQKSD 553
++ G ++G + A V + D
Sbjct: 794 DAFTVSSMIKGYCKKGDMEEALSVFTEFKD 823
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%)
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
S +I C+ GK E AL V + + VT +++ AL + G++++ + ++
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
+G + Y++ I +FK + A+ EM + G +VV+ S LI G
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
+A + +M +G P+ TY+ ++ LCK+G+ EEA L ++L GI + T+
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 533 FGLNREGKRDLA 544
G+ R+G + A
Sbjct: 355 DGICRKGNLNRA 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
+++I+I + G A+ ++ +G P+ TY +I LC K K+++A ++
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC--KMGKLEEAFVLFN 336
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAG 363
+++ G D+ L T + +C G++ A +++ G L+Y+ +I LC AG
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
+V EA ++ VVG D +T +++ + ++ ++ L + I + + +
Sbjct: 397 RVSEADEVSKGVVG------DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
L+ F G+A + M + P+ T + +I+GY + +A +F ++
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR- 509
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
K Y+ ++ LCK G + A +++ ++ + G+ RT+ ++ G
Sbjct: 510 KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 339 DSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS-SLDQVTCGSIIHALL 396
D L+ G + L++ +I G+++ A+ + + + D C ++I
Sbjct: 123 DCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFC 182
Query: 397 RKGRLEDALAKIDAMKQQGIKL-TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNV 455
+ G+ E AL ++ G+ + + YT+L+ + +V + +++ ++ G+E +
Sbjct: 183 KIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDC 242
Query: 456 VTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
V S I GY +DA M KG D +YS+L+ L K G EEA+ L+ K
Sbjct: 243 VFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGK 302
Query: 516 MLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
M+ G+ P+ I + + GL + GK + A V+ +
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNR 337
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 8/207 (3%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGE 305
+TI+I + G A+N K+ G + + TY LI LC ++G V+ AL+++
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC-QQGCLVE-ALRLFDS 715
Query: 306 MINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAG 363
+ N G VP + + LC+ G L+A K DS+ G VP + Y+ I+ C+ G
Sbjct: 716 LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL-VPNIIIYNSIVDGYCKLG 774
Query: 364 KVEEAL-ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
+ E+A+ ++ +++G + + D T S+I +KG +E+AL+ K + I
Sbjct: 775 QTEDAMRVVSRKMMG--RVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQS 449
+ LI F + ++ +A ++ EM S
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 299 ALKMYGEMINAG-HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLII 356
AL + +++G VP+ T + LC++G V E R L+ G+ + YS I
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 357 RALCRAGKVEEALALAGEVVGAEKS-SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQG 415
+ G + +AL E+V EK + D V+ +I L ++G +E+AL + M ++G
Sbjct: 250 HGYFKGGALVDALMQDREMV--EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 416 IKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAW 475
++ + YT++I K ++ +A + + G E + LI G A+
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 476 NVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
++ M+ +G P TY+ ++ LC GR EA + + G+V I + T+
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLL 419
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 172/422 (40%), Gaps = 44/422 (10%)
Query: 157 DWSLI-QEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRK-QPGY-KHTAESYNL 213
DW LI ++ I FV+ VLQ + H+ L F+ WV P Y K + L
Sbjct: 58 DWFLILNQEFTTHRIGLNTRFVISVLQNQDNPLHS-LRFYLWVSNFDPVYAKDQSLKSVL 116
Query: 214 AIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADG 273
+ G M L E+R + Y ++ E ++I +GR+GL + F +I G
Sbjct: 117 GNALFRKGPLLLSME-LLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLG 175
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
PS Y +I AL K +D A + +M + G PD+ + +C+ G V E
Sbjct: 176 MKPSTRLYNAVIDALV--KSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 334 ARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII 392
A + +++ G + +Y+++I AG+V+EAL E++ K + ++ T + +
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQL-EMMRVRKLNPNEATIRTFV 292
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
H + R A + ++ L Y +++ + + + ++ + GY
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 453 PNVVTCSA-----------------------------------LIRGYMNVERPIDAWNV 477
P+ T +A L++ +N +R +
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 478 FYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNR 537
+M + G +Y+ ++ CLCK R E A + +M D GI P+ + F T G +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 538 EG 539
G
Sbjct: 473 RG 474
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 16/287 (5%)
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
++I GY P ST+ + C KG + + +++ ++ G P + G L
Sbjct: 343 LRKIGERGYIPDSSTFNAAMS--CLLKGHDLVETCRIFDGFVSRGVKPG------FNGYL 394
Query: 326 CEVGSVLEARKCTDS---LKKIGYTVPLS----YSLIIRALCRAGKVEEALALAGEVVGA 378
V ++L A++ ++ LK++G LS Y+ +I LC+A ++E A E+
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
S + VT + + +G ++ ++ + G K + ++ +I + K++
Sbjct: 455 GISP-NLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD 513
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A + +EM + G EPN +T + LIR + + +F +MK G PD Y+ +
Sbjct: 514 AFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQ 573
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
CK+ + ++A +L+ ML G+ P + T+ L+ G+ AR
Sbjct: 574 SFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 620
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/531 (20%), Positives = 206/531 (38%), Gaps = 85/531 (16%)
Query: 6 VSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRD 65
V N + A+ F+ M G KP +Y + I +CK ++ ++++ +M+ R
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQE--GNRP 248
Query: 66 EVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKS 125
VF + I F + +V E+ KQ+ E +RV +L
Sbjct: 249 NVFTYTILI----DGFLIAGRVD--------------EALKQL-------EMMRVRKLNP 283
Query: 126 EKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAI--RFTPEFVVEVLQI 183
+ ++T+ VH + R L + ++ +EK + R + V+ L
Sbjct: 284 NEAT-------IRTF----VHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLS- 331
Query: 184 CNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS 243
N F + ++ GY + ++N A+ + G D +F
Sbjct: 332 NNSMAKETGQFLRKIGER-GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGF 390
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
+ +++ + K++ DG S +Y +I LC K R++++A
Sbjct: 391 NGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC--KARRIENAAMFL 448
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRA 362
EM + G P+ T+L G V + + L G+ +++SLII LCRA
Sbjct: 449 TEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRA 508
Query: 363 GKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
++++A E++ G E +++T +I + G + ++ MK+ G+ +
Sbjct: 509 KEIKDAFDCFKEMLEWGIEP---NEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDL 565
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
+ Y + I F K ++V KA E+++ M + G +P
Sbjct: 566 YAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP--------------------------- 598
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
D TYS L+ L + GR EA ++ + G VP + R V
Sbjct: 599 --------DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 154/354 (43%), Gaps = 48/354 (13%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
++P ++ +S NL+ D K + N R P+ + ++ YG I +
Sbjct: 52 REPSLRNPFKSPNLS--------DAKSLFNSIAATSR--IPLDLKFHNSVLQSYGSIAVV 101
Query: 260 NMAMNCFKEI--KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKEL 317
N + F+ I + P RST+ L+ C + + ++ M+N G PD+
Sbjct: 102 NDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQ-- 159
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVG 377
++ + +R+LC G+V+EA L E+
Sbjct: 160 --------------------------------VTTDIAVRSLCETGRVDEAKDLMKELT- 186
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ-GIKLTIHVYTSLIVHFFKEKQV 436
+ S D T ++ L + L +D M+ +K + +T LI + K +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
+AM ++ ++ +G++P+ + +++G+ + + +A V+ +MK +G PD TY+ L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ L K GR EEA + M+D G P T + ++ G+ R+G+ A +L++
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEE 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 7/329 (2%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKD--FKHMRNLFFEMRRNNYPVTSETWTIMIM 251
F ++ QP ++ ++ + + A D ++ + M N T I +
Sbjct: 108 FQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVR 167
Query: 252 LYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
G + A + KE+ P TY +L+ LC K V + EM +
Sbjct: 168 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV--VYEFVDEMRDDFD 225
Query: 312 V-PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEAL 369
V PD + +C ++ EA L G+ Y+ I++ C K EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 370 ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVH 429
+ ++ E DQ+T ++I L + GR+E+A + M G + YTSL+
Sbjct: 286 GVYKKM-KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 430 FFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPD 489
++ + A+ ++EEM+ G PN T + L+ G ++ MK G +
Sbjct: 345 MCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLE 404
Query: 490 FETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
Y+ L+ L K G+ EA ++ +D
Sbjct: 405 SNGYATLVRSLVKSGKVAEAYEVFDYAVD 433
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 162/368 (44%), Gaps = 11/368 (2%)
Query: 171 RFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNL 230
R TP V EVL++ N FF W KQ GYKH +YN F+ L
Sbjct: 122 RVTPSIVAEVLKLGND-AAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL 180
Query: 231 FFEMRRNNYPVTSETWTIMIMLYG--RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
M P + + + I+I ++ R GL ++++K G+ P Y ++ AL
Sbjct: 181 PELMDSQGRPPSEKQFEILIRMHADNRRGLR--VYYVYEKMKKFGFKPRVFLYNRIMDAL 238
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK-IGYT 347
K D AL +Y + G V + + LC+ G + E + +++ +
Sbjct: 239 V--KNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP 296
Query: 348 VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
+Y+ +I+ L G ++ +L + E+ E D + G+++ L + GR+E
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP-DVMAYGTLVVGLCKDGRVERGYEL 355
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
MK + I + +Y LI F + +V A + E++ SGY ++ +A+I+G +
Sbjct: 356 FMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
V + A+ +F + PDFET S ++ + R + ++ ++ + G S +
Sbjct: 416 VNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVS--D 473
Query: 528 FRTVFFGL 535
+ T FF L
Sbjct: 474 YLTQFFKL 481
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 154/357 (43%), Gaps = 15/357 (4%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
K+ G + ++ + +K + M + MR N +T MI G
Sbjct: 255 KEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNL 314
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
+ ++ + E++ D P Y L++ LC K +V+ +++ EM + D+E+
Sbjct: 315 DASLRVWDEMRRDEIKPDVMAYGTLVVGLC--KDGRVERGYELFMEMKGKQILIDREIYR 372
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGA 378
+ G V A + L GY + Y+ +I+ LC +V++A L +V
Sbjct: 373 VLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF-QVAIE 431
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK-----E 433
E+ D T I+ A + RL D ++ + + G ++ + + FFK E
Sbjct: 432 EELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDY-----LTQFFKLLCADE 486
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
++ A+++ ++ G+ +V + L+ + + ++FY M+ G PD +Y
Sbjct: 487 EKNAMALDVFYILKTKGH-GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSY 545
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
S+ + C + G + A K+++ VPS + ++ GL + G+ D +++++
Sbjct: 546 SIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE 602
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 10/325 (3%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
LF EM+ + E + ++I + G A N ++++ GY Y +I LC
Sbjct: 355 LFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLC 414
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
+VD A K++ I PD E + + + + + + + ++GY V
Sbjct: 415 SVN--QVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVS 472
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+ + LC A + + A+AL + K ++ AL + G ++ +L+
Sbjct: 473 DYLTQFFKLLC-ADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFY 531
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M++ G + Y+ I F ++ V A E++ + P++ +L +G +
Sbjct: 532 EMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIG 591
Query: 470 RPIDAWNVFYRMKL----KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
IDA + R L GP +F+ Y++ + +CK +E+ MK++ +M G+ +
Sbjct: 592 E-IDAVMLLVRECLGNVESGPM-EFK-YALTVCHVCKGSNAEKVMKVVDEMNQEGVFINE 648
Query: 526 INFRTVFFGLNREGKRDLARVVLQQ 550
+ + + G+++ G +AR V +
Sbjct: 649 VIYCAIISGMSKHGTIKVAREVFTE 673
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 117/282 (41%), Gaps = 6/282 (2%)
Query: 270 KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVG 329
K GY + Y A C + A ++ M + G P ++ E + +
Sbjct: 150 KQKGYKHDFAAYN--AFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNR 207
Query: 330 SVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
L + +KK G+ + Y+ I+ AL + G + ALA+ + E +++ T
Sbjct: 208 RGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDF--KEDGLVEESTT 265
Query: 389 GSI-IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
I + L + GR+E+ L + M++ K + YT++I E + ++ + +EM+
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR 325
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
+ +P+V+ L+ G R + +F MK K D E Y +L+ G+
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVR 385
Query: 508 EAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
A L ++D G + + V GL + D A + Q
Sbjct: 386 SACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ 427
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 150/370 (40%), Gaps = 54/370 (14%)
Query: 159 SLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIA 218
+LI +L+ + TP VE+L + + G + A +YN +
Sbjct: 265 TLINARLKSGGL--TPNLAVELLDMV---------------RNSGLRPDAITYNTLLSAC 307
Query: 219 VSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR 278
+ +F +M + T+ MI +YGR GL A F E++ G+ P
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 279 STYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCT 338
TY L+ A + R + ++Y +M G D+
Sbjct: 368 VTYNSLLYAFA--RERNTEKVKEVYQQMQKMGFGKDE----------------------- 402
Query: 339 DSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRK 398
++Y+ II + G+++ AL L ++ G + D +T +I +L +
Sbjct: 403 -----------MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 451
Query: 399 GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTC 458
R +A A + M GIK T+ Y++LI + K + +A + M +SG +P+ +
Sbjct: 452 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 511
Query: 459 SALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
S ++ + AW ++ M G P + Y +++ L K RS++ K I M +
Sbjct: 512 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Query: 519 -CGIVPSTIN 527
CG+ P I+
Sbjct: 572 LCGMNPLEIS 581
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 155/373 (41%), Gaps = 11/373 (2%)
Query: 176 FVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMR 235
V +L + ++ L + R +P + YN + + F + L MR
Sbjct: 193 MVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMR 252
Query: 236 -RNNYPVTSETWTIMIMLYGRIGLT-NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
R P T++ GLT N+A+ ++ G P TY L+ A C R
Sbjct: 253 QRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA-CSRDS 311
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPLSY 352
+D A+K++ +M PD + G EA + L+ G+ ++Y
Sbjct: 312 -NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 353 SLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+ ++ A R E+ + ++ +G K D++T +IIH ++G+L+ AL
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGK---DEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 411 MKQ-QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
MK G YT LI K + +A ++ EM G +P + T SALI GY
Sbjct: 428 MKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+ +A + F M G PD YS++L L + + +A L M+ G PS +
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYE 547
Query: 530 TVFFGLNREGKRD 542
+ GL +E + D
Sbjct: 548 LMILGLMKENRSD 560
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/552 (19%), Positives = 226/552 (40%), Gaps = 34/552 (6%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G+ EA F M G KP +Y+V + L + + T + +M +
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 61 IAIRDEVFHWVITYL--ENKGEFAVKEKVQQMHTASKLAP----------EKFSESKKQV 108
++ +I L EN+ + +++ ++ M + P E F + +Q+
Sbjct: 539 HTPSYTLYELMILGLMKENRSD-DIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQL 597
Query: 109 FVGIKVEEDVRVDQLKSEKVDCSLVLPHLKTYSERDVH-EVCRILSSSMDWSLIQEKLEK 167
V I ++ D L L L +YS H E +L ++E
Sbjct: 598 KVAITNGYELENDTL----------LSILGSYSSSGRHSEAFELLE------FLKEHASG 641
Query: 168 SAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHM 227
S T +V ++ N + +F+ ++ Y + V+ + +
Sbjct: 642 SKRLITEALIVLHCKV-NNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEA 700
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIA 287
+F ++R + + M+++Y ++G A + + G+ + S II
Sbjct: 701 SQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIE 760
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
G++ + A + G + +G PD + + + + G AR +++ + G +
Sbjct: 761 AYGKQ-KLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 348 VPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
+ S ++++ ALC G++EE L + E + + + + ++ A R G + +
Sbjct: 820 PTVESINILLHALCVDGRLEE-LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
+MK G TI +Y +I K K+V A ++ EM+++ ++ + +++++ Y
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT 938
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
+E V+ R+K G PD TY+ L+ C+ R EE L+ +M + G+ P
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD 998
Query: 527 NFRTVFFGLNRE 538
++++ ++
Sbjct: 999 TYKSLISAFGKQ 1010
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 10/283 (3%)
Query: 243 SETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL--CGRKGRKVDDAL 300
S +T +I YG+ L A + ++ G +P T+ L+ A CG R A
Sbjct: 752 SPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYER----AR 807
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRAL 359
++ M+ G P E I L LC G + E + L+ +G+ + S L++ A
Sbjct: 808 AIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAF 867
Query: 360 CRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKG-RLEDALAKIDAMKQQGIKL 418
RAG + E + + A L + ++ LL KG R+ DA + M++ K+
Sbjct: 868 ARAGNIFEVKKIYSSMKAA--GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKV 925
Query: 419 TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVF 478
+ ++ S++ + + K +++ + ++++G EP+ T + LI Y RP + + +
Sbjct: 926 ELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLM 985
Query: 479 YRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
+M+ G P +TY L++ K E+A +L ++L G+
Sbjct: 986 QQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 311 HVPDKELIETYLGCLCEVGS-VLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEAL 369
H P+ ++ LG L L T + +G V + Y+ ++ R+GK +A
Sbjct: 187 HSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQV-YNAMMGVYSRSGKFSKAQ 245
Query: 370 ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK--IDAMKQQGIKLTIHVYTSLI 427
L + + D ++ ++I+A L+ G L LA +D ++ G++ Y +L+
Sbjct: 246 ELV-DAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL 304
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
++ + A+++ E+M+ +P++ T +A+I Y +A +F ++LKG F
Sbjct: 305 SACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF 364
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
PD TY+ LL + +E+ ++ +M G + + T+ ++G+ DLA
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 115/265 (43%), Gaps = 12/265 (4%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
K GY T Y + I++ GK + + EM N+ V W M+ +Y I
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
+ ++ IK G P +TY LII C + R+ ++ + +M N G P + +
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYC--RDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
+ + + + +A + + L G + S+ + + R + A +++
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSK---AEKLLQMM 1058
Query: 380 KSSLDQVTCGSIIHALL----RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
K++ + T + +H L+ G ++A + +K ++LT Y+S+I + + K
Sbjct: 1059 KNAGIEPTLAT-MHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 436 VGKAMEIIEEMQQSGYEPN--VVTC 458
+E + EM++ G EP+ + TC
Sbjct: 1118 YNSGIERLLEMKKEGLEPDHRIWTC 1142
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 168/391 (42%), Gaps = 20/391 (5%)
Query: 136 HLKTYSERDVHEVCRILSSSMD-WSLIQEKLEKSAIRFTPEFVVEVLQICNK--YGHNVL 192
HL SE +HEV RI+SS + ++E L + ++ + V +V++ C +L
Sbjct: 28 HLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLL 87
Query: 193 NFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML 252
FFSW K G + +N +++ KD M+ L ++R+ N + +T++I+
Sbjct: 88 RFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAET 147
Query: 253 YGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHV 312
++G A+ FK + T +I ALC R K + G M + V
Sbjct: 148 LVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVK-----RALGVMHHHKDV 202
Query: 313 PDKELIETYLGCLCEVG---SVLEARKCTDSLKKIGYTVPL-SYSLIIRALCR------- 361
+ Y L +V EAR+ +K G T L ++ ++ LC
Sbjct: 203 ISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNP 262
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
+G V EAL + E + + K ++ ++ L R R+ ++ ++ MK+ G
Sbjct: 263 SGLVPEALNIMLE-MRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTG 321
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
Y ++ + + GK +I++EM + G+ P LI VER A +F +M
Sbjct: 322 SYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKM 381
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
K + Y +L+ LCK G E+ +L
Sbjct: 382 KRSSVGGYGQVYDLLIPKLCKGGNFEKGREL 412
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
++S++ L + GK E+A+ + +++ D T +II AL +G ++ AL +
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHH 198
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM--NV 468
K + VY SL+ + ++ V +A +I++M+ +G P++ ++L+ NV
Sbjct: 199 HKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNV 258
Query: 469 ERPI-----DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
R +A N+ M+ P +Y++LL+CL + R E+ +++ +M G P
Sbjct: 259 NRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDP 318
Query: 524 STINF 528
T ++
Sbjct: 319 DTGSY 323
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI--I 286
N+ EMR TS ++ I++ GR + +++K G P +Y +++ +
Sbjct: 271 NIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL 330
Query: 287 ALCGR--KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI 344
L GR KG ++ D EMI G P+++ +G LC V V A + + +K+
Sbjct: 331 YLTGRFGKGNQIVD------EMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRS 384
Query: 345 ---GYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
GY Y L+I LC+ G E+ L E + +
Sbjct: 385 SVGGYGQ--VYDLLIPKLCKGGNFEKGRELWEEALSID 420
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/442 (19%), Positives = 180/442 (40%), Gaps = 63/442 (14%)
Query: 174 PEFVVEVLQICNKYGHNVLN----------FFSWVRKQPGYKHTAESYNLAIKIAVSGKD 223
PE ++ ++ K VLN FF+W KQ GY++ +YN I +
Sbjct: 62 PELLILSPELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQ 121
Query: 224 FKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS-PSRSTYK 282
++ L ++ + ++ + I G GL + A + F ++ G P+ TY
Sbjct: 122 NASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYN 181
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK 342
L+ A+ V+ EM + G DK + L C G A + +
Sbjct: 182 CLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEIL 241
Query: 343 KIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLE 402
G+ ++++ + C+ G+V++A L E++ L+ T +IH +++ R++
Sbjct: 242 SRGWLDEHISTILVVSFCKWGQVDKAFELI-EMLEERDIRLNYKTYCVLIHGFVKESRID 300
Query: 403 DALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN-----VVT 457
A + M++ G+ I +Y LI K K + A+ + E+++SG P+ +
Sbjct: 301 KAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL 360
Query: 458 CS----------------------------ALIRGYMNVERPIDAWNVFYRM-------- 481
CS +L G++ + +A++ +
Sbjct: 361 CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDG 420
Query: 482 -----KL-----KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
KL K PD ++ S+++ CL K + + A+ L+ ++ G++P + + +
Sbjct: 421 VSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNI 480
Query: 532 FFGLNREGKRDLARVVLQQKSD 553
G+ +EG+ + + +L + D
Sbjct: 481 IEGMCKEGRSEESLKLLGEMKD 502
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 137/303 (45%), Gaps = 37/303 (12%)
Query: 243 SETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKM 302
S++ +I+I + +MA+ +I +G P Y +I +C ++GR +++LK+
Sbjct: 439 SDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMC-KEGRS-EESLKL 496
Query: 303 YGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYS-LIIRALCR 361
GEM +AG P + + GCL E + A ++ G+ + ++ +++ LC
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 362 AGKVEEALALAGEVVG--------AEKSSLDQVT---------------CGS-------- 390
G+ +A +V G A +++D + C +
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 391 ---IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
+I AL + R +A + M +G+K T+ Y S+I + KE ++ + + I M
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
+ P+V+T ++LI G RP +A + MK K +P+ T+ L+ LCK G S
Sbjct: 677 EDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Query: 508 EAM 510
EA+
Sbjct: 737 EAL 739
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 6/238 (2%)
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVE 366
N +PD + + + CL + V A + + G P+ Y+ II +C+ G+ E
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 367 EALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
E+L L GE+ G E S Q T I L + AL + M+ G + I T
Sbjct: 492 ESLKLLGEMKDAGVEPS---QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTT 548
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
L+ + + A + ++++ G+ ++V +A I G + E +F +
Sbjct: 549 FLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
G PD Y +L+ LCK R+ EA L +M+ G+ P+ + ++ G +EG+ D
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL- 350
K VD L+++ ++ GH PD + LC+ +EA + + G +
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+Y+ +I C+ G+++ L+ + EK+ D +T S+IH L GR +A+ + +
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP-DVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
MK + + +LI K G+A+ EM++ EP+ +L+ +++ E
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSEN 769
Query: 471 PIDAWNVFYRMKLKGPFP-------------------DFETYSMLLTCLCKVGR 505
+ +F M KG FP D T S LTCL K GR
Sbjct: 770 INAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVEDLRT-SCYLTCLIKDGR 822
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 48/343 (13%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
++P ++ +S NL+ D K + N R P+ + ++ YG I +
Sbjct: 52 REPSLRNPFKSPNLS--------DAKSLFNSIAATSR--IPLDLKFHNSVLQSYGSIAVV 101
Query: 260 NMAMNCFKEI--KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKEL 317
N + F+ I + P RST+ L+ C + + ++ M+N G PD+
Sbjct: 102 NDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQ-- 159
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVG 377
++ + +R+LC G+V+EA L E+
Sbjct: 160 --------------------------------VTTDIAVRSLCETGRVDEAKDLMKELT- 186
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ-GIKLTIHVYTSLIVHFFKEKQV 436
+ S D T ++ L + L +D M+ +K + +T LI + K +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
+AM ++ ++ +G++P+ + +++G+ + + +A V+ +MK +G PD TY+ L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+ L K GR EEA + M+D G P T + ++ G+ R+G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 160/383 (41%), Gaps = 41/383 (10%)
Query: 159 SLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIA 218
+LI+E + S I +T Q K+ H++L+ S V K G K +N I +
Sbjct: 344 TLIEEGHKPSLITYTTLVTALTRQ---KHFHSLLSLISKVEKN-GLKPDTILFNAIINAS 399
Query: 219 VSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADG-YSPS 277
+ +F +M+ + T+ T+ +I YG+IG + + D P+
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN 459
Query: 278 RSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKC 337
T L+ A C + RK+++A + +M + G PD V+
Sbjct: 460 DRTCNILVQAWCNQ--RKIEEAWNIVYKMQSYGVKPD----------------VVTFNTL 501
Query: 338 TDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLR 397
+ +IG T +I R L K + TCG+I++
Sbjct: 502 AKAYARIGSTCTAEDMIIPRML------------------HNKVKPNVRTCGTIVNGYCE 543
Query: 398 KGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT 457
+G++E+AL MK+ G+ + V+ SLI F + E+++ M++ G +P+VVT
Sbjct: 544 EGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT 603
Query: 458 CSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML 517
S L+ + +V ++ M G PD +S+L + G E+A +++ +M
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 518 DCGIVPSTINFRTVFFGLNREGK 540
G+ P+ + + + G G+
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGE 686
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 4/278 (1%)
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
G A + F + +G+ PS TY L+ AL +K L + ++ G PD
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQK--HFHSLLSLISKVEKNGLKPDTI 390
Query: 317 LIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEV 375
L + E G++ +A K + +K+ G S ++ +I+ + GK+EE+ L +
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 376 VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
+ E + TC ++ A + ++E+A + M+ G+K + + +L + +
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 436 VGKAME-IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
A + II M + +PNV TC ++ GY + +A FYRMK G P+ ++
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
L+ + + +++ M + G+ P + F T+
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 386 VTCGSI------IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
TCG + ++ L+ +GR ++A + + + ++G K ++ YT+L+ ++K
Sbjct: 314 TTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL 373
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ +I +++++G +P+ + +A+I A +F +MK G P T++ L+
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 500 LCKVGRSEEAMKLIFKML 517
K+G+ EE+ +L+ ML
Sbjct: 434 YGKIGKLEESSRLLDMML 451
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 181/432 (41%), Gaps = 35/432 (8%)
Query: 145 VHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGY 204
+ ++ R S+ D L +R T +FV++VL L FF W +QPG+
Sbjct: 83 IFDILRAPSNDGDDRAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGF 142
Query: 205 KHTAESYNLAIKIAVSGKDFKHM-----RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
HT +++ KI K M R++ FE R++ + +++ Y G T
Sbjct: 143 HHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDA----LVVGYAVAGRT 198
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIAL----CGRKGRKVDDALKMYGEMINAGHVPDK 315
++A+ F ++ G Y L+ AL C + D + + G + H
Sbjct: 199 DIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTH---S 255
Query: 316 ELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL----SYSLIIRALCRAGKVEEALAL 371
L++ + C+ G + EA D L+ + P +++ ALC K +EA L
Sbjct: 256 ILVKKF----CKQGKLDEAE---DYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKL 308
Query: 372 AGEVVGAEKSSLDQVTCGSIIHALLRKGRLE---DALAKIDAMKQQGIKLTIHVYTSLIV 428
E+ ++D+ I AL++ G L D L KI + +G +L + Y S++
Sbjct: 309 LDEIKLVGTVNMDRAY-NIWIRALIKAGFLNNPADFLQKISPL--EGCELEVFRYNSMVF 365
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
KE + +I+ EM G PN T +A + + +A ++ G P
Sbjct: 366 QLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAP 425
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR--V 546
+Y+ L+ LC E+A ++ +D G F T+ L +GK D+AR V
Sbjct: 426 TAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
Query: 547 VLQQKSDLIRRR 558
+ + DL+ +R
Sbjct: 486 IAAAERDLLPKR 497
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 186/453 (41%), Gaps = 26/453 (5%)
Query: 11 ISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHW 70
+ EA ++++S G PT SY I LC E VL + + F
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 71 VITYLENKGEFAVKEKVQQMHTASKLAPEKFSESK---KQVFVGIKVEEDVRVDQL-KSE 126
+ L KG+ + ++ L P++ + K VG KVE+ + +++L
Sbjct: 468 LTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVG-KVEDALMINELFNKS 526
Query: 127 KVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTP--EFVVEVLQIC 184
VD S K ++ ++ ++ + LI EK +TP V+Q
Sbjct: 527 GVDTS-----FKMFTSL-IYGSITLMRGDIAAKLIIRMQEKG---YTPTRSLYRNVIQCV 577
Query: 185 NKYGHNVLNFFSWVRK--QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVT 242
+ NFF+ + K ++H ++YNL I+ A K R ++ M R+ T
Sbjct: 578 CEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPT 637
Query: 243 SETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKM 302
+ +M+ Y + A++ F +++ G + R Y+ +I+ LC K K+DDA+
Sbjct: 638 VASNILMLQSYLKNEKIADALHFFHDLREQGKTKKR-LYQVMIVGLC--KANKLDDAMHF 694
Query: 303 YGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCR 361
EM G P E E + LC EA + +K G + ++++ +
Sbjct: 695 LEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMK 754
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
+ V EA + E + + G +I + +E L ++D + ++ L ++
Sbjct: 755 SKGVYEAWTRMRNI---EDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMY 811
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
Y ++++ Q A E++E + + GY PN
Sbjct: 812 TY-NMLLRMIVMNQAEDAYEMVERIARRGYVPN 843
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 5/259 (1%)
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT-VPL 350
K +D + EM+ G P+K+ + L C+ G V EA + S +IG+ +
Sbjct: 369 KENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAM 428
Query: 351 SYSLIIRALCRAGKVEEAL-ALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
SY+ +I LC VE+A L G + L T ++ +AL KG+ + A +
Sbjct: 429 SYNYLIHTLCANESVEQAYDVLKGAI--DRGHFLGGKTFSTLTNALCWKGKPDMARELVI 486
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
A ++ + +I +V A+ I E +SG + + ++LI G + +
Sbjct: 487 AAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLM 546
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
R A + RM+ KG P Y ++ C+C++ E+ + +
Sbjct: 547 RGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAY 606
Query: 530 TVFF-GLNREGKRDLARVV 547
+F G GK LAR+V
Sbjct: 607 NLFIEGAGFAGKPKLARLV 625
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
+R +Y T + +MI +G+ + + + IK + + Y ++ + G
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYS 353
+++ A+++ M + G P + L L E K S K+G + +
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
++I+ LC +G +E AL L E +KS + +T +I KG+ E+A ++ M++
Sbjct: 207 ILIKGLCESGNLEAALQLLDEF-PQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
+ I+ + LI K+ +V + ++++E M+ G EPN T ++ G ++ +R ++
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
A + +M G P F +Y ++ LC+ E ++ +M++ G VP T+
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTL 378
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 390 SIIHALLRKGRLEDALAKI-DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
+ I LL +L D + KI + + G+++ LI + + A+++++E Q
Sbjct: 171 NFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQ 230
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
PNV+T S LIRG+ N + +A+ + RM+ + PD T+++L++ L K GR EE
Sbjct: 231 QKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 290
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
+ L+ +M G P+ ++ V +GL + KR+L
Sbjct: 291 GIDLLERMKVKGCEPNPGTYQEVLYGL-LDKKRNL 324
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 167/359 (46%), Gaps = 14/359 (3%)
Query: 175 EFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTA---ESYNLAIKIAVSGKDFKHMRNLF 231
+FVV V + G N++ F W + T ES +AI D + +L
Sbjct: 158 DFVVRVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLV 217
Query: 232 FEM--RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
E+ + + + E +I L+G++G + A + F + + G++P+ TY + ALC
Sbjct: 218 KEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALC 277
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
R +D A + +M+ +G + + E + + C+ G EA + K ++P
Sbjct: 278 KRSF--MDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLP 335
Query: 350 LSY-SLIIRALCRA-GKVEEALALAGEVVG-AEKSSLDQVTCGSIIHALLRKGRLEDALA 406
+ + +I ALC+ G + A + G++ G A + + + +IH+L R ++DA A
Sbjct: 336 PRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFS--DVIHSLCRMRNVKDAKA 393
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHF-FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+ M +G V+ +L+VH K + +A E+++ M+ G +P+V T + +I GY
Sbjct: 394 LLLDMISKGPAPGNAVF-NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGY 452
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
+A + K K TY L+ CK+ +EA+KL+ +M G+ P+
Sbjct: 453 AKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPN 511
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 167/367 (45%), Gaps = 14/367 (3%)
Query: 161 IQEKLEKSAIRFTPEFV--VEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIA 218
++ +L+K ++F P V + L+I + L+ F W +KQP Y + E Y +
Sbjct: 159 LETQLDK--LQFVPNMVHITQSLKIVKEV-DAALSLFRWAKKQPWYLPSDECYVVLFDGL 215
Query: 219 VSGKDFKHMRNLFFEMRRNNYP---VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS 275
G+DF +++LF EM +++ ++ + +I + +A CFK+ + G
Sbjct: 216 NQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCK 275
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
TY L++ L KG A ++Y M + D E + L + G + A
Sbjct: 276 IDTQTYNNLMM-LFLNKGLPYK-AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAF 333
Query: 336 KCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVG-AEKSSLDQVTCGSIIH 393
K +K+ S +S ++ ++ +AG+++ ++ + E+ G + S S+I
Sbjct: 334 KLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV--SLID 391
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
+ + G+L+ AL D MK+ G + +YT +I K ++ AM + ++M+++G+ P
Sbjct: 392 SYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
T S L+ + + A ++ M G P +Y LLT L + A K++
Sbjct: 452 TPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKIL 511
Query: 514 FKMLDCG 520
+M G
Sbjct: 512 LEMKAMG 518
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%)
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
S LD T II +L + GRL+ A MK++ ++ + V++SL+ K ++ +M
Sbjct: 309 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSM 368
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
++ EMQ G+ P+ +LI Y + A ++ MK G P+F Y+M++
Sbjct: 369 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 428
Query: 501 CKVGRSEEAMKLIFKMLDCGIVPSTINF 528
K G+ E AM + M G +P+ +
Sbjct: 429 AKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Query: 203 GYKHTAESY-NLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNM 261
G++ +A + +L A +GK +R L+ EM+++ + +T++I + + G +
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALR-LWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
AM FK+++ G+ P+ STY L+ G +VD A+K+Y M NAG P +
Sbjct: 437 AMTVFKDMEKAGFLPTPSTYSCLLEMHAGSG--QVDSAMKIYNSMTNAGLRPGLSSYISL 494
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
L L V A K +K +GY+V + S ++ + V+ AL +G+
Sbjct: 495 LTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWL-RFMGSSGI 553
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
+ + + ++ G + A ++ + K+ + +YTS++ H + + K +
Sbjct: 554 KTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQ 613
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
++ + + ++ + C L G ++P+
Sbjct: 614 LMSILSATKHKAHAFMC-GLFTGPEQRKQPV 643
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 161/357 (45%), Gaps = 4/357 (1%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
VL+ F+ +Q G+ H +Y++ + V K F + + +M+ + ++
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 251 MLYGRIGLTNMAMNCFKEIKADG-YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA 309
+ R L + M F I+ PS + + L + L +Y + N
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKH-NL 190
Query: 310 GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEE 367
G P+ + + C+ G + A + +K+ G + P ++YS ++ L + +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A+ L +++ E S D VT +I+ R G +E A +D MK+ G ++ Y++L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
F K ++ +A + +E++++G + + V + L+ + +A + MK
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
D TY+++L L GRSEEA++++ + G+ + ++R + L G+ + A
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 152/348 (43%), Gaps = 43/348 (12%)
Query: 197 WVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN--NYPVTSETWTIMIMLYG 254
+ + G + +N+ +K D + EM+R+ +YP + T+M L+
Sbjct: 185 YAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFA 244
Query: 255 RIGLTNMAMNCFKE-IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVP 313
+ A+ F++ I +G SP T+ +I C R G +V+ A K+ M G P
Sbjct: 245 H-SRSKEAVELFEDMISKEGISPDPVTFNVMINGFC-RAG-EVERAKKILDFMKKNGCNP 301
Query: 314 DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALA 372
+ + C+VG + EA++ D +KK G + + Y+ ++ CR G+ +EA+ L
Sbjct: 302 NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 373 GEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
GE+ A + D +T I+ L +GR E+AL +D +G+ L Y ++
Sbjct: 362 GEM-KASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIIL----- 415
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
N + C+ +E+ + +V M +G +P T
Sbjct: 416 ---------------------NALCCNG------ELEKAVKFLSV---MSERGIWPHHAT 445
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
++ L+ LC+ G +E ++++ L G++P ++ V + +E K
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERK 493
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 154/362 (42%), Gaps = 42/362 (11%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN-NYPVTSETWTIM 249
V+ F+ ++ K + + + + + + + R L + N + + I+
Sbjct: 143 VMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNIL 202
Query: 250 IMLYGRIGLTNMAMNCFKEIKADGYS-PSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+ + + G N A +E+K G S P+ TY L+ L K +A++++ +MI+
Sbjct: 203 VKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK--EAVELFEDMIS 260
Query: 309 A-GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVE 366
G PD + C G V A+K D +KK G + +YS ++ C+ GK++
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
EA K + D+V K+ G+KL YT+L
Sbjct: 321 EA-----------KQTFDEV-------------------------KKTGLKLDTVGYTTL 344
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP 486
+ F + + +AM+++ EM+ S + +T + ++RG + R +A + + +G
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARV 546
+ +Y ++L LC G E+A+K + M + GI P + + L G ++
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVR 464
Query: 547 VL 548
VL
Sbjct: 465 VL 466
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 153/371 (41%), Gaps = 11/371 (2%)
Query: 186 KYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRN-NYPVTSE 244
K L F W PG+ H+ +Y + F + L EM + P
Sbjct: 54 KSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDA 113
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
+ +I +GR L ++ + G PS + ++ L +D A + +
Sbjct: 114 IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED---IDIAREFFT 170
Query: 305 -EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRA 362
+M+ +G D + L + + K +K G + Y+ ++ ALC+
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
GKV A +L E+ + VT +I A + +L ++ ++ G +
Sbjct: 231 GKVGRARSLMSEM-----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
T ++ E +V +A+E++E ++ G + +VV C+ L++GY + + A F M+
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRD 542
KG P+ ETY++L+ C VG + A+ M I + F T+ GL+ G+ D
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405
Query: 543 LARVVLQQKSD 553
+L+ D
Sbjct: 406 DGLKILEMMQD 416
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 139/311 (44%), Gaps = 37/311 (11%)
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIA 287
+ F EM R Y ET+ ++I Y +G+ + A++ F ++K D + +T+ LI
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRG 397
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
L G + DD LK +LE + +D++ G
Sbjct: 398 L--SIGGRTDDGLK-----------------------------ILEMMQDSDTVH--GAR 424
Query: 348 VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
+ Y+ +I + + E+AL ++ EK V + +L KG ++D
Sbjct: 425 ID-PYNCVIYGFYKENRWEDALEF---LLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTA 480
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
D M +G +I V LI + + ++ +++E+I +M GY P T +A+I G+
Sbjct: 481 YDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCK 540
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
++ ++ M +G PD E+Y+ LL LC G ++A L +M++ IVP
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Query: 528 FRTVFFGLNRE 538
+ ++ F L+++
Sbjct: 601 WSSLMFCLSQK 611
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 152/378 (40%), Gaps = 51/378 (13%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K + + +N + + V +D R FF + + + +T I++ G + LTN
Sbjct: 142 GIKPSLKVFNSILDVLVK-EDIDIARE-FFTRKMMASGIHGDVYTYGILMKG-LSLTNRI 198
Query: 263 MNCFKEI---KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
+ FK + K G +P+ Y L+ ALC K KV A + EM V LI
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALC--KNGKVGRARSLMSEMKEPNDVTFNILIS 256
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVG 377
Y C ++++ + +G+ VP ++ + ++ LC G+V EAL + E V
Sbjct: 257 AY----CNEQKLIQSMVLLEKCFSLGF-VPDVVTVTKVMEVLCNEGRVSEALEVL-ERVE 310
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
++ +D V C +++ G++ A M+++G + Y LI + +
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLD 370
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP--------------------IDAWNV 477
A++ +M+ N T + LIRG R ID +N
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC 430
Query: 478 ----FYR-----------MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
FY+ +K++ FP S L LC+ G ++ +M+ G V
Sbjct: 431 VIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV 490
Query: 523 PSTINFRTVFFGLNREGK 540
PS I + ++ GK
Sbjct: 491 PSIIVSHCLIHRYSQHGK 508
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 5/277 (1%)
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P TY LI C + G DDALK++ EM+ P T + LC+ V EA
Sbjct: 150 PDACTYNILIHG-CSQSG-CFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 336 KCTDSLKKIGYTVPLS--YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH 393
K + K+ P Y+ +I+ALC+ G++ A L E K +D ++I
Sbjct: 208 KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG-KIKVDAAIYSTLIS 266
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
+L++ GR + ++ M ++G K Y LI F E A +++EM + G +P
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
+V++ + ++ + +++ +A +F M +G PD +Y ++ LC+ + EEA ++
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 514 FKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ML G P L GK ++ V+
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISS 423
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 340 SLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKG 399
S+ + G +Y+++I ++G ++AL L E+V +K VT G++IH L +
Sbjct: 143 SIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMV-KKKVKPTGVTFGTLIHGLCKDS 201
Query: 400 RLEDALA-KIDAMKQQGIKLTIHVYTSLIVHF---------FKEK--------------- 434
R+++AL K D +K G++ T+H+Y SLI FK K
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIY 261
Query: 435 --------QVGKAME---IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+ G++ E I+EEM + G +P+ VT + LI G+ A V M
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
KG PD +Y+M+L ++ + EEA L M G P T+++R VF GL + +
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 544 ARVVLQQ 550
A V+L +
Sbjct: 382 AAVILDE 388
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 187/431 (43%), Gaps = 51/431 (11%)
Query: 159 SLIQEKLEKSAIRFTPEFVVEVLQIC--NKYGHNVLNFFSWVRKQPGYKHTAESYNLAIK 216
S ++++L + ++ + EVL+ C N++ + L FF W ++H+A Y A
Sbjct: 45 SNLEKELASANVQLDSSCINEVLRRCDPNQF-QSGLRFFIWAGTLSSHRHSAYMYTKACD 103
Query: 217 I-AVSGK------------------DFKHMRNLFFEMRRNN--------------YPVTS 243
I + K + K MR + + N + V +
Sbjct: 104 ILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCA 163
Query: 244 ET--WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALK 301
+T + ++I L+ G N+A KE+ G P TY +I C K+DDA +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCN--AGKIDDAWR 221
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI---GYTVP--LSYSLII 356
+ EM V + L +C+ G + A + ++K G P ++Y+L+I
Sbjct: 222 LAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVI 281
Query: 357 RALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK-IDAM-KQQ 414
+A C +VEEAL L + +G ++VT +I +L AL+K ID + K
Sbjct: 282 QAFCEKRRVEEAL-LVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
G+ L+ ++S V + K+ +A +I M G P+ + CS + R +ER +D
Sbjct: 341 GVSLS-ECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDC 399
Query: 475 WNVFYRMKLKG--PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
+ ++ ++ K D + +++LL LC+ G S EA KL MLD + + +
Sbjct: 400 FLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKII 459
Query: 533 FGLNREGKRDL 543
L + G DL
Sbjct: 460 EALKKTGDEDL 470
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 422 VYTSLIVHFFKEK-QVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
V +L++ F +K + A +I+EM G P+V+T +++I GY N + DAW +
Sbjct: 166 VAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKE 225
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM--LDCG--IVPSTINFRTVFFGLN 536
M + TYS +L +CK G E A++L+ +M D G I P+ + + V
Sbjct: 226 MSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFC 285
Query: 537 REGKRDLARVVLQQ 550
+ + + A +VL +
Sbjct: 286 EKRRVEEALLVLDR 299
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 157/394 (39%), Gaps = 47/394 (11%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K ++ I + V D ++ M T+TI+I + G A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+ +I G PS TY LI C K + +Y +MI G+ PD + +
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFC--KCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPLS---YSLIIRALCRAGKVEEALA---LAG--- 373
L + G +L A + S+K +G ++ L+ ++ +I CR + +EAL L G
Sbjct: 469 DGLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 374 ----------------------------------EVVGAEKSSLDQVTCGSIIHALLRKG 399
+++ K S D C +IH L +
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 400 RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
R+EDA + + + ++ I Y ++I + +++ +A I E ++ + + PN VT +
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 460 ALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDC 519
LI A +F M KG P+ TY L+ K E + KL +M +
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 520 GIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
GI PS +++ + GL + G+ D A + Q D
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 110/538 (20%), Positives = 215/538 (39%), Gaps = 58/538 (10%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G R + A+ +FK ME +GI+P +Y+ I K A
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK---------------AGM 336
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRV 120
+ + ++F Q +H KL FS S V+V D+
Sbjct: 337 LGMGHKLFS------------------QALHKGVKLDVVVFS-STIDVYVK---SGDLAT 374
Query: 121 DQLKSEKVDCSLVLPHLKTYSERDVHEVC---RILSS-SMDWSLIQEKLEKSAIRFTPEF 176
+ +++ C + P++ TY+ + +C RI + M +++ +E S + ++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTIL-IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS-- 431
Query: 177 VVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRR 236
+++ C + ++ GY Y + + H +M
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKM--GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 237 NNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI------IALCG 290
+ + + +I + R+ + A+ F+ + G P +T+ ++ A C
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFC- 548
Query: 291 RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP- 349
K K L+++ M D + + L + + +A K ++L + G P
Sbjct: 549 -KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE-GKMEPD 606
Query: 350 -LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
++Y+ +I C +++EA + E++ + VT +IH L + ++ A+
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
M ++G K Y L+ F K + + ++ EEMQ+ G P++V+ S +I G
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
R +A N+F++ PD Y++L+ CKVGR EA L ML G+ P +
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+++ +I C+ G+++ A L +V+ D + ++I + G L
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLF-KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
+G+KL + V++S I + K + A + + M G PNVVT + LI+G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
R +A+ ++ ++ +G P TYS L+ CK G L M+ G P + +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 530 TVFFGLNREG 539
+ GL+++G
Sbjct: 466 VLVDGLSKQG 475
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 5/262 (1%)
Query: 292 KGRKVDD---ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
KG VD A ++ +++ G P+ T + C+ G + A +++ G
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 349 PL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
L +YS +I +AG + L + + + LD V S I ++ G L A
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQAL-HKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
M QGI + YT LI ++ ++ +A + ++ + G EP++VT S+LI G+
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
+ ++ M G PD Y +L+ L K G AM+ KML I + +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 528 FRTVFFGLNREGKRDLARVVLQ 549
F ++ G R + D A V +
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFR 520
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 8/256 (3%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +I + + G + A + FK ++ G P Y LI K + K++
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY--FKAGMLGMGHKLFS 345
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+ ++ G D + + + + G + A + G + + +Y+++I+ LC+ G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 364 KVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
++ EA + G+++ G E S VT S+I + G L A + M + G +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSI---VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
+Y L+ K+ + AM +M NVV ++LI G+ + R +A VF M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 482 KLKGPFPDFETYSMLL 497
+ G PD T++ ++
Sbjct: 523 GIYGIKPDVATFTTVM 538
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 23/306 (7%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA--------GH 311
N A+ F+ + G PS T +++I R G D A K++ EMI G
Sbjct: 84 NSALKYFRWAEISGKDPSFYTIAHVLI----RNGM-FDVADKVFDEMITNRGKDFNVLGS 138
Query: 312 VPDKEL----IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVE 366
+ D+ L + + C C G V +A + ++G +P S ++ +L + +V+
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198
Query: 367 EALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
++ G E S + G ++ AL KG + AL + ++G ++ I V
Sbjct: 199 LIADHFDKLCRGGIEPSGVS--AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI-VSC 255
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
+ ++ Q+ A ++ + G PNVVT LI G+ A+++F M+ +
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
G PD YS L+ K G KL + L G+ + F + + G A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 545 RVVLQQ 550
VV ++
Sbjct: 376 SVVYKR 381
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 117/231 (50%), Gaps = 10/231 (4%)
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL-- 341
LI LC K R V AL++ M + G P+ + + LC+ G + +A + +
Sbjct: 54 LIDTLC--KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 111
Query: 342 KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQ--VTCGSIIHALLRKG 399
KKI V +++S +I A + GK+ + ++ ++ + S+D T S+I+ L
Sbjct: 112 KKINPNV-ITFSALIDAYAKRGKLSKVDSVYKMMI---QMSIDPNVFTYSSLIYGLCMHN 167
Query: 400 RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
R+++A+ +D M +G + Y++L FFK +V ++++++M Q G N V+C+
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 460 ALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
LI+GY + A VF M G P+ +Y+++L L G E+A+
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEM----INAGHVPDKEL 317
A+ K +K G SP+ TY LI LC K ++ DA + EM IN + L
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLC--KSGRLADAERRLHEMDSKKINPNVITFSAL 124
Query: 318 IETYL--GCLCEVGSVL-----------------------------EARKCTDSLKKIGY 346
I+ Y G L +V SV EA K D + G
Sbjct: 125 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 347 TVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
T + +YS + ++ +V++ + L ++ + + V+C ++I + G+++ AL
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDM-PQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
M G+ I Y ++ F +V KA+ E MQ++ + +++T + +I G
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
+A+++FY++K K PDF+ Y++++ L + G EA
Sbjct: 304 CKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 8/244 (3%)
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSY-SLIIRALCRAG 363
+M+ G PD + + C S+ +A ++K+G + +++I LC+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 364 KVEEALALAGEVVGAEKS---SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
V AL EV+ K S + VT S+I L + GRL DA ++ M + I +
Sbjct: 63 LVVPAL----EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
+++LI + K ++ K + + M Q +PNV T S+LI G R +A +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
M KG P+ TYS L K R ++ +KL+ M G+ +T++ T+ G + GK
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 541 RDLA 544
DLA
Sbjct: 239 IDLA 242
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 6/283 (2%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P T L+ C + DA+ + G+M G D + + LC+ V+
Sbjct: 8 GIEPDIVTASSLVNGFC--LSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVV 65
Query: 333 EARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
A + +K G + + +YS +I LC++G++ +A E+ ++K + + +T ++
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM-DSKKINPNVITFSAL 124
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
I A ++G+L + M Q I + Y+SLI +V +A+++++ M G
Sbjct: 125 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMK 511
PNVVT S L G+ R D + M +G + + + L+ + G+ + A+
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 244
Query: 512 LIFKMLDCGIVPSTINFRTVFFGL--NREGKRDLARVVLQQKS 552
+ M G++P+ ++ V GL N E ++ L+R QK+
Sbjct: 245 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT 287
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 10/294 (3%)
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY 303
+T+ I++ + G T+ A+ FK +K+ P TY LI LC K R+V M
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLC--KSRRVGSVDWMM 211
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRA 362
E+ +G+ P+ T L + + + + +KK GYT + ++ AL +
Sbjct: 212 RELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKT 271
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G+ EEA E+V + S D V+ ++++ + G L+ ++ ++ +G+K +
Sbjct: 272 GRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT 331
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
+T ++ G A + + + + G +P+VVTC+ LI G A +F M+
Sbjct: 332 HTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI-VPSTINFRTVFFGL 535
++ F TY+ ++ LCK GR A KL+ + G+ +PS+ R V G+
Sbjct: 392 VRDEF----TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSAR-RAVLSGI 440
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 7/320 (2%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
++ G + +YN I A + LF EM + ++ ++ Y ++G
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 260 NMAMNCFKE-IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI 318
A E I G P TY L+ ALC K D+A++++ + + + P+
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALC--KSGHTDNAIELF-KHLKSRVKPELMTY 191
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVG 377
+ LC+ V LKK GYT ++Y+ +++ + ++E+ L L + +
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK-MK 250
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIK-LTIHVYTSLIVHFFKEKQV 436
E + D +++ AL++ GR E+A + + + G + I Y +L+ +FK+ +
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
+++EE++ G +P+ T + ++ G +N+ A + G P T + L
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
Query: 497 LTCLCKVGRSEEAMKLIFKM 516
+ LCK G + AM+L M
Sbjct: 371 IDGLCKAGHVDRAMRLFASM 390
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 38/307 (12%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +I Y R + A + ++ G P +TY LI K ++ L+++
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISG--AAKNLMLNRVLQLFD 107
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGK 364
EM+++G PD T + C ++G EA K
Sbjct: 108 EMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKI--------------------------- 140
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
+ E + LAG V G + ++ ++ AL + G ++A+ +K + +K + Y
Sbjct: 141 LHEDIHLAGLVPGIDTYNI-------LLDALCKSGHTDNAIELFKHLKSR-VKPELMTYN 192
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
LI K ++VG ++ E+++SGY PN VT + +++ Y +R +F +MK +
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI-NFRTVFFGLNREGKRDL 543
G D +++ L K GR+EEA + + +++ G I ++ T+ ++G D
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 544 ARVVLQQ 550
+L++
Sbjct: 313 VDDLLEE 319
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 57/363 (15%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM 251
LNFF W KQ Y H + F HM + ++ R Y +
Sbjct: 56 LNFFFWCAKQNNYFH-------------DDRAFDHMVGVVEKLTREYYSIDR-------- 94
Query: 252 LYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
+ R+ ++ EIK +L++ +G D A+++Y M + G
Sbjct: 95 IIERLKISGC------EIKPR---------VFLLLLEIFWRGHIYDKAIEVYTGMSSFGF 139
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALC-RAGKVEEALA 370
VP+ + + ++ V A + + ++ + S+ + + C R G+
Sbjct: 140 VPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF---FSFDIALSHFCSRGGR------ 190
Query: 371 LAGEVVG---------AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
G++VG E ++ G I+ R G + +A + M GI ++++
Sbjct: 191 --GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVN 248
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
V++ L+ FF+ + KA+++ +M Q G PN+VT ++LI+G++++ +A+ V ++
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKR 541
+ +G PD ++++ ++GR EEA K+ + +VP F ++ L GK
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 542 DLA 544
DL
Sbjct: 369 DLV 371
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 9/312 (2%)
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
V+ W++++ + R G A++ F ++ G SP+ TY LI VD+A
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLG--MVDEAF 302
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL--IIRA 358
+ ++ + G PD L + +G EARK SL+K VP Y+ I+ +
Sbjct: 303 TVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEK-RKLVPDQYTFASILSS 361
Query: 359 LCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKL 418
LC +GK + L + + D VT + + + G AL + M + L
Sbjct: 362 LCLSGKFD----LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 419 TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVF 478
+ YT + + A+++ + + + + SA+I + + + A ++F
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 479 YRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
R L+ D +Y++ + L + R EEA L M + GI P+ +RT+ GL +E
Sbjct: 478 KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKE 537
Query: 539 GKRDLARVVLQQ 550
+ + R +L++
Sbjct: 538 KETEKVRKILRE 549
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 138/359 (38%), Gaps = 38/359 (10%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM 251
L F ++++Q K Y + I + +F EM + ++T +I
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 252 LYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
YGR G ++ +K + SPS TY +I A C R G + L ++ EM + G
Sbjct: 185 AYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGI 243
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALA 370
PD T L G EA ++ G L+ YS ++ + ++E+
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 371 LAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF 430
L GE+ A SL +T Y L+ +
Sbjct: 304 LLGEM--ASGGSLPDITS----------------------------------YNVLLEAY 327
Query: 431 FKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
K + +AM + +MQ +G PN T S L+ + R D +F MK PD
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA 387
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
TY++L+ + G +E + L M++ I P + + F + G + AR +LQ
Sbjct: 388 ATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 5/333 (1%)
Query: 210 SYNLAIKI-AVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKE 268
+YN I A G D++ + LF EMR T+ ++ GL + A F+
Sbjct: 213 TYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRT 272
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEV 328
+ G P +TY +L+ K R+++ + GEM + G +PD L +
Sbjct: 273 MNDGGIVPDLTTYSHLVETFG--KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKS 330
Query: 329 GSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
GS+ EA ++ G T +YS+++ ++G+ ++ L E+ + + D T
Sbjct: 331 GSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAAT 389
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
+I G ++ + M ++ I+ + Y +I K A +I++ M
Sbjct: 390 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 449
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
+ P+ + +I + +A F M G P ET+ LL + G +
Sbjct: 450 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
Query: 508 EAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
E+ ++ +++D GI + F + GK
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
Y+++I L R G +++ L + E+ ++ S + ++I+A R GR E +L +D M
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMP-SQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAM-EIIEEMQQSGYEPNVVTCSAL-----IRGY 465
K + I +I Y ++I + + + + EM+ G +P++VT + L IRG
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
+ +A VF M G PD TYS L+ K+ R E+ L+ +M G +P
Sbjct: 263 GD-----EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 526 INFRTVFFGLNREGKRDLARVVLQQ 550
++ + + G A V Q
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQ 342
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 119/554 (21%), Positives = 211/554 (38%), Gaps = 60/554 (10%)
Query: 16 KIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYL 75
++F M QG+ + SYT I + R E L++LD M+ KI+ ++ VI
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 76 ENKG---EFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDVRVDQLKSEKVDCSL 132
G E + + H + P+ + + I+ D ++ ++
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEG--IQPDIVTYNTLLSACAIRGLGDEA--EMVFRTMNDGG 277
Query: 133 VLPHLKTYSE--------RDVHEVCRILSSS---------MDWSLIQEKLEKSAIRFTPE 175
++P L TYS R + +VC +L ++++ E KS
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 176 FVVEVLQI--CNKYGHN---VLNFFSW------VR------KQPGYKHTAESYNLAIKIA 218
V +Q C + +LN F VR K A +YN+ I++
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 219 VSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR 278
G FK + LF +M N ET+ +I G+ GL A + + A+ PS
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 279 STYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCT 338
Y +I A + ++AL + M G P E + L G V E+
Sbjct: 458 KAYTGVIEAFG--QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 339 DSLKKIGYTVPL---SYSLIIRALCRAGKVEEALALAGEVVGAEKS--SLDQVTCGSIIH 393
L G +P +++ I A + GK EEA+ V EKS D+ T +++
Sbjct: 516 SRLVDSG--IPRNRDTFNAQIEAYKQGGKFEEAVK---TYVDMEKSRCDPDERTLEAVLS 570
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
+++ + + MK I +I Y ++ + K ++ E++EEM +
Sbjct: 571 VYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSN 630
Query: 454 NVVTCSALIRGYMNVERPIDAWN----VFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
+I+G + + W V ++ +G Y+ LL L +G+ E A
Sbjct: 631 IHQVIGQMIKGDYDDD---SNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERA 687
Query: 510 MKLIFKMLDCGIVP 523
+++ + G+ P
Sbjct: 688 ARVLNEATKRGLFP 701
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 140/328 (42%), Gaps = 44/328 (13%)
Query: 215 IKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGY 274
+K VS F ++ F+ +R + V + ++ G M M FK++K G
Sbjct: 153 VKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGL 212
Query: 275 SPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEA 334
+ TY ++ ALC RKG + A+ L E SV
Sbjct: 213 CANEYTYAIVVKALC-RKGNLEEAAM-----------------------LLIENESVF-- 246
Query: 335 RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV--TCGSII 392
Y I LC G+ E+A+AL E++ + + D + G ++
Sbjct: 247 ----------------GYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVV 290
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
+ +++ A + I M++ G L ++ ++I + K + +A+ +++M G +
Sbjct: 291 RGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLK 350
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
N V S +++ Y ++ ++A F + F D Y++ L K+GR EEA +L
Sbjct: 351 VNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFEL 410
Query: 513 IFKMLDCGIVPSTINFRTVFFGLNREGK 540
+ +M D GIVP IN+ T+ G +GK
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGK 438
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 151/340 (44%), Gaps = 28/340 (8%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+L EM N T+ +++ R G + ++ +KA+G P+ T +I L
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
C RKV +A + + ++ Y CE G ++K + ++ Y
Sbjct: 504 CF--ARKVKEAEDFFSSLEQKCPENKASFVKGY----CEAGL---SKKAYKAFVRLEY-- 552
Query: 349 PLSYSLIIR---ALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
PL S+ I+ +LC G +E+A + ++ A + + CG +I A + + +A
Sbjct: 553 PLRKSVYIKLFFSLCIEGYLEKAHDVLKKM-SAYRVEPGRSMCGKMIGAFCKLNNVREAQ 611
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
D M ++G+ + YT +I + + ++ KA + E+M+Q G +P+VVT + L+ Y
Sbjct: 612 VLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRY 671
Query: 466 MNVERP-------------IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
+ ++ A V G D Y++L+ CK+ E+A +L
Sbjct: 672 LKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAEL 731
Query: 513 IFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKS 552
+M+D G+ P + + T+ R+G D+A ++ + S
Sbjct: 732 FDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELS 771
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
SLI++ C+ EAL E LD+V AL + GR+E+A + MK
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDM-NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMK 415
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
+GI + YT+LI + + +V A+++I+EM +G P+++T + L+ G
Sbjct: 416 DRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
+ ++ RMK +GP P+ T S+++ LC + +EA
Sbjct: 476 EVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 13/274 (4%)
Query: 283 YLIIALCGR--KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDS 340
Y +A+ R K + +AL +M+ G + ++ L C C++ LEA +
Sbjct: 319 YACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKE 378
Query: 341 LKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL-DQVTCGSIIHALLRK 398
+ + + + Y++ AL + G+VEEA L E+ ++ + D + ++I +
Sbjct: 379 FRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM--KDRGIVPDVINYTTLIDGYCLQ 436
Query: 399 GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTC 458
G++ DAL ID M G+ + Y L+ + + +EI E M+ G +PN VT
Sbjct: 437 GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTN 496
Query: 459 SALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
S +I G + +A + F ++ K P E + + C+ G S++A K F L+
Sbjct: 497 SVIIEGLCFARKVKEAEDFFSSLEQKCP----ENKASFVKGYCEAGLSKKAYK-AFVRLE 551
Query: 519 CGIVPSTINFRTVFFGLNREGKRDLARVVLQQKS 552
+ S + +FF L EG + A VL++ S
Sbjct: 552 YPLRKSV--YIKLFFSLCIEGYLEKAHDVLKKMS 583
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 146/322 (45%), Gaps = 4/322 (1%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G +Y+L I V+ ++ R + EM + S ++ ++ + G
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
KE+K+ G P R Y +I K +D A+ + M++ G PD+ T +
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFG--KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Query: 323 GCLCEVGSVLEARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS 381
C C+ G + A + +++++ G +Y+++I + + ++ L G++ ++
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM-KSQGI 545
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
+ VT +++ + GR DA+ ++ MK G+K + +Y +LI + + +A+
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
M G +P+++ ++LI + R +A+ V MK G PD TY+ L+ L
Sbjct: 606 AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI 665
Query: 502 KVGRSEEAMKLIFKMLDCGIVP 523
+V + ++ + +M+ G P
Sbjct: 666 RVDKFQKVPVVYEEMIMSGCKP 687
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 145/355 (40%), Gaps = 10/355 (2%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
+Q G K +YN +K V K ++ EM + T++++I Y G
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGR-KGRKVDDALKMYGEMINAGHVPDKELI 318
A KE++A P+ + L+ R + +K LK EM + G PD++
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK---EMKSIGVKPDRQFY 447
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGK--VEEALALAGEV 375
+ + + A D + G ++++ +I C+ G+ V E + A E
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 376 VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
G + T +I++ + R +D + MK QGI + +T+L+ + K +
Sbjct: 508 RGCLPCA---TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 436 VGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSM 495
A+E +EEM+ G +P+ +ALI Y A N F M G P +
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 496 LLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
L+ + R EA ++ M + G+ P + + T+ L R K VV ++
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALAL-AGEVVGAE 379
+G + +A +++ GY ++YSL+I++L R+ K++ + L + + +
Sbjct: 204 IGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERD 263
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
K LD II + G AL + + G+ S+I + +A
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+ EE++QSG +P +AL++GY+ DA ++ M+ +G PD TYS+L+
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 500 LCKVGRSEEAMKLIFKMLDCGIV-PSTINFRTVFFGLNREGK 540
GR E A +++ K ++ G V P++ F + G G+
Sbjct: 384 YVNAGRWESA-RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 19/343 (5%)
Query: 196 SWVRKQPGYKHTAESYNL--AIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLY 253
SW++K + SY L +I I G+ K ++ P+T + +I
Sbjct: 155 SWLQKH----NLCFSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLT---YNALIGAC 207
Query: 254 GRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDA--LKMYGEMINAGH 311
R A+N +++ DGY Y +I +L + K+D L++Y E+
Sbjct: 208 ARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLT--RSNKIDSVMLLRLYKEIERDKL 265
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL-IIRALCRAGKVEEALA 370
D +L+ + + G +A + + G + + + II AL +G+ EA A
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 371 LAGEVVGAEKSSLDQVT--CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
L E+ +S + T +++ ++ G L+DA + + M+++G+ H Y+ LI
Sbjct: 326 LFEEL---RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
+ + A +++EM+ +PN S L+ G+ + + V MK G P
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
D + Y++++ K + AM +ML GI P + + T+
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 157/383 (40%), Gaps = 53/383 (13%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
++ G+V + +A + ME +G+ P +Y++ I A R E VL EM+A
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 61 IAIRDEVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEE---D 117
+ VF ++ ++GE+ + F K+ +G+K + +
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQ----------------KTFQVLKEMKSIGVKPDRQFYN 448
Query: 118 VRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFV 177
V +D K +C L H T +R ++ E +E + +
Sbjct: 449 VVIDTFG--KFNC---LDHAMTTFDR----------------MLSEGIEPDRVTWN---- 483
Query: 178 VEVLQICN-KYGHNVL--NFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM 234
L C+ K+G +++ F + ++ G A +YN+ I + + M+ L +M
Sbjct: 484 --TLIDCHCKHGRHIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKM 540
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
+ T T ++ +YG+ G N A+ C +E+K+ G PS + Y LI A R
Sbjct: 541 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG-- 598
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYS 353
+ A+ + M + G P + + + E EA +K+ G ++Y+
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Query: 354 LIIRALCRAGKVEEALALAGEVV 376
+++AL R K ++ + E++
Sbjct: 659 TLMKALIRVDKFQKVPVVYEEMI 681
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 164/393 (41%), Gaps = 47/393 (11%)
Query: 190 NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSET---- 245
+ L W G+KH++++Y++A+ I K + M+ F E R + VT T
Sbjct: 103 SALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE-FVERMRGDKLVTLNTVAKI 161
Query: 246 ---------WTIMIMLYGRIGLTNM-----AMNCF-----KEIKADG-----------YS 275
W + ++ R+G + +MN KE + + +
Sbjct: 162 MRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT 221
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P+ T+ I C K +V++AL EM G P T + C C+ ++
Sbjct: 222 PNAHTFNIFIHGWC--KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 336 KCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHA 394
+ ++ G ++Y+ I+ +L + EEAL +A + + D + +IH
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS-GCKPDSLFYNCLIHT 338
Query: 395 LLRKGRLEDA--LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY- 451
L R GRLE+A + +++ M + G+ + Y S+I + + KA+E+++EM+ S
Sbjct: 339 LARAGRLEEAERVFRVE-MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP-DFETYSMLLTCLCKVGRSEEAM 510
P+V T L+R ++ + M K D TY+ L+ LC+ E A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
L +M+ I P RT L K+++
Sbjct: 458 CLFEEMISQDITP---RHRTCLLLLEEVKKKNM 487
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 9/204 (4%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKI 408
S +L++ LC+ +VE+A + ++ KS + + T IH + R+E+AL I
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQL----KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
MK G + + YT++I + ++ + K E++ EM+ +G PN +T + ++ +N
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS-LNA 306
Query: 469 ERPI-DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI-FKMLDCGIVPSTI 526
++ +A V RMK G PD Y+ L+ L + GR EEA ++ +M + G+ +T
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 527 NFRTVFFGLNREGKRDLARVVLQQ 550
+ ++ + D A +L++
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKE 390
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 164/393 (41%), Gaps = 47/393 (11%)
Query: 190 NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSET---- 245
+ L W G+KH++++Y++A+ I K + M+ F E R + VT T
Sbjct: 103 SALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE-FVERMRGDKLVTLNTVAKI 161
Query: 246 ---------WTIMIMLYGRIGLTNM-----AMNCF-----KEIKADG-----------YS 275
W + ++ R+G + +MN KE + + +
Sbjct: 162 MRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT 221
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P+ T+ I C K +V++AL EM G P T + C C+ ++
Sbjct: 222 PNAHTFNIFIHGWC--KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 336 KCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHA 394
+ ++ G ++Y+ I+ +L + EEAL +A + + D + +IH
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS-GCKPDSLFYNCLIHT 338
Query: 395 LLRKGRLEDA--LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY- 451
L R GRLE+A + +++ M + G+ + Y S+I + + KA+E+++EM+ S
Sbjct: 339 LARAGRLEEAERVFRVE-MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP-DFETYSMLLTCLCKVGRSEEAM 510
P+V T L+R ++ + M K D TY+ L+ LC+ E A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
L +M+ I P RT L K+++
Sbjct: 458 CLFEEMISQDITP---RHRTCLLLLEEVKKKNM 487
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 9/204 (4%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKI 408
S +L++ LC+ +VE+A + ++ KS + + T IH + R+E+AL I
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQL----KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
MK G + + YT++I + ++ + K E++ EM+ +G PN +T + ++ +N
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS-LNA 306
Query: 469 ERPI-DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI-FKMLDCGIVPSTI 526
++ +A V RMK G PD Y+ L+ L + GR EEA ++ +M + G+ +T
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 527 NFRTVFFGLNREGKRDLARVVLQQ 550
+ ++ + D A +L++
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKE 390
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 182/410 (44%), Gaps = 48/410 (11%)
Query: 148 VCRIL---SSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYG---HNVLNFFSWVRKQ 201
VC IL +S D L+ KL + + T EF LQ+CN + V FF + +
Sbjct: 49 VCTILYQQQNSPDSRLVS-KLSSTKFQLTHEFF---LQVCNNFPLSWRPVHRFFLYSQTH 104
Query: 202 -PGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRR---NNYPVTSETWTIMIMLYGRIG 257
P + HT+ + N + I + ++ +LF+E+ + V +T+ I++
Sbjct: 105 HPDFTHTSTTSNKMLAIIGNSRNM----DLFWELAQEIGKRGLVNDKTFRIVLKTLASAR 160
Query: 258 LTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMY---GEMINAGHVPD 314
+N F + GY + T + LC K + V++A ++ E I PD
Sbjct: 161 ELKKCVNYFHLMNGFGYLYNVETMNRGVETLC--KEKLVEEAKFVFIKLKEFIK----PD 214
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL-IIRALCRAGKVEEALALAG 373
+ T + C+VG ++EA K + + G+ V + I+ L + + +EA +
Sbjct: 215 EITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFY 274
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
+V LD +I L + GR++ A D M+++G+ + + SLI +
Sbjct: 275 VMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVK 334
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
++V +A ++E ++ P++ LI+G + ++R +A VF +M +G P TY
Sbjct: 335 RRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 390
Query: 494 SMLLTC-LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF-GLNREGKR 541
MLL L + GR G P +NF T+F G+ + GKR
Sbjct: 391 LMLLQGHLGRRGRK-------------GPDP-LVNFDTIFVGGMIKAGKR 426
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 139/357 (38%), Gaps = 67/357 (18%)
Query: 189 HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM-RRNNYPVTSETWT 247
L FF W+ G+ H + + G DFK + + ++ RR N T +
Sbjct: 108 QKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTAS 167
Query: 248 IMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI 307
I + M C E +G+ V +AL + M
Sbjct: 168 ITCL-----------MKCLGE---EGF---------------------VKEALATFYRMK 192
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP---LSYSLIIRALCRAGK 364
PD T + LC VG+ +AR D ++ G+ P +Y+++I + CR G
Sbjct: 193 EYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGM 252
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
Q C I + R+ +A M +G + Y
Sbjct: 253 --------------------QTGCRKAI-----RRRMWEANRMFREMLFRGFVPDVVTYN 287
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM--K 482
LI K ++G+A+E+ E+M+ G PN VT ++ IR Y +V I+ R K
Sbjct: 288 CLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIR-YYSVTNEIEGAIEMMRTMKK 346
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
L P TY+ L+ L + R+ EA L+ +M++ G+VP ++ V L+ EG
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 139/318 (43%), Gaps = 9/318 (2%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G K ++ I + V D ++ M T+TI+I + G A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 263 MNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYL 322
+ +I G PS TY LI C K + +Y +MI G+ PD + +
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFC--KCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 323 GCLCEVGSVLEARKCTDSLKKIGYTVPLS---YSLIIRALCRAGKVEEALALAGEVVGAE 379
L + G +L A + S+K +G ++ L+ ++ +I CR + +EAL + ++G
Sbjct: 469 DGLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIY 525
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
D T +++ + +GRLE+AL M + G++ Y +LI F K +
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
+++ + MQ++ ++ C+ +I R DA F + PD TY+ ++
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 500 LCKVGRSEEAMKLIFKML 517
C + R +EA + IF++L
Sbjct: 646 YCSLRRLDEAER-IFELL 662
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 8/290 (2%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+ +I + + G + A + FK ++ G P Y LI K + K++
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY--FKAGMLGMGHKLFS 345
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAG 363
+ ++ G D + + + + G + A + G + + +Y+++I+ LC+ G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 364 KVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
++ EA + G+++ G E S VT S+I + G L A + M + G +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSI---VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
+Y L+ K+ + AM +M NVV ++LI G+ + R +A VF M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ G PD T++ ++ GR EEA+ L F+M G+ P + + T+
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 6/256 (2%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P Y LI A C K K L+++ M D + + L + +
Sbjct: 561 GLEPDALAYCTLIDAFC--KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 333 EARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGS 390
+A K ++L + G P ++Y+ +I C +++EA + E++ + VT
Sbjct: 619 DASKFFNNLIE-GKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTI 676
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+IH L + ++ A+ M ++G K Y L+ F K + + ++ EEMQ+ G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
P++V+ S +I G R +A N+F++ PD Y++L+ CKVGR EA
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Query: 511 KLIFKMLDCGIVPSTI 526
L ML G+ P +
Sbjct: 797 LLYEHMLRNGVKPDDL 812
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 39/347 (11%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
L+ +M + YP + +++ + GL AM ++ + + LI C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV- 348
+ + D+ALK++ M G PD T + G + EA + K+G
Sbjct: 508 --RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
L+Y +I A C+ K L L +++ K S D C +IH L + R+EDA
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLF-DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR----- 463
+ + + ++ I Y ++I + +++ +A I E ++ + + PN VT + LI
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 464 ----GYMNV-----------------------ERPID---AWNVFYRMKLKGPFPDFETY 493
G + + + +D ++ +F M+ KG P +Y
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
S+++ LCK GR +EA + + +D ++P + + + G + G+
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+++ +I C+ G+++ A L +V+ D + ++I + G L
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLF-KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
+G+KL + V++S I + K + A + + M G PNVVT + LI+G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
R +A+ ++ ++ +G P TYS L+ CK G L M+ G P + +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 530 TVFFGLNREG 539
+ GL+++G
Sbjct: 466 VLVDGLSKQG 475
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 5/262 (1%)
Query: 292 KGRKVDD---ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
KG VD A ++ +++ G P+ T + C+ G + A +++ G
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 349 PL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
L +YS +I +AG + L + + + LD V S I ++ G L A
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQAL-HKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
M QGI + YT LI ++ ++ +A + ++ + G EP++VT S+LI G+
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
+ ++ M G PD Y +L+ L K G AM+ KML I + +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 528 FRTVFFGLNREGKRDLARVVLQ 549
F ++ G R + D A V +
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFR 520
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 11/275 (4%)
Query: 258 LTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKEL 317
L ++ ++C G +P+ T+ LI C R ++D A ++ M G PD
Sbjct: 273 LLSLVLDC-------GPAPNVVTFCTLINGFCKRG--EMDRAFDLFKVMEQRGIEPDLIA 323
Query: 318 IETYLGCLCEVGSVLEARKC-TDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVV 376
T + + G + K + +L K + +S I ++G + A + ++
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 377 GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQV 436
+ S + VT +I L + GR+ +A + ++G++ +I Y+SLI F K +
Sbjct: 384 -CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
+ E+M + GY P+VV L+ G + A +M + + ++ L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ C++ R +EA+K+ M GI P F TV
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 23/306 (7%)
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN--------AGH 311
N A+ F+ + G PS T +++I R G D A K++ EMI G
Sbjct: 84 NSALKYFRWAEISGKDPSFYTIAHVLI----RNGM-FDVADKVFDEMITNRGKDFNVLGS 138
Query: 312 VPDKEL----IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVE 366
+ D+ L + + C C G V +A + ++G +P S ++ +L + +V+
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198
Query: 367 EALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
++ G E S + G ++ AL KG + AL + ++G ++ I V
Sbjct: 199 LIADHFDKLCRGGIEPSGVS--AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI-VSC 255
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
+ ++ Q+ A ++ + G PNVVT LI G+ A+++F M+ +
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
G PD YS L+ K G KL + L G+ + F + + G A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 545 RVVLQQ 550
VV ++
Sbjct: 376 SVVYKR 381
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 10/282 (3%)
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
+ PS TYK L+ +LC K A + M+ + YL LC + + E
Sbjct: 373 FFPSEYTYKLLMESLC--KELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTE 430
Query: 334 ARKCTDSLKKIGYTVPLSYSL--IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
S+ + G P Y+L +I LC+ G+V++A+ + +++ + + D VT ++
Sbjct: 431 ILNVLVSMLQ-GDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 392 IHALLRKGRLEDALAKID-AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+ LL +GR E+AL ++ M + IK + Y ++I FK + +AM + +++++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL--KGPFPDFETYSMLLTCLCKVGRSEE 508
+ T + +I G + V +D F+ + G F Y+ L LC+ G +
Sbjct: 550 VTADSTTYAIIIDG-LCVTNKVDMAKKFWDDVIWPSGRHDAF-VYAAFLKGLCQSGYLSD 607
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
A ++ + D G +P+ + + TV +R G + A +L++
Sbjct: 608 ACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEE 649
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 137/354 (38%), Gaps = 80/354 (22%)
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
+ PS + Y L+ LC +V DA K+ +M N GH+PD T +G CE+ +
Sbjct: 158 FVPSLTNYNRLMNQLC--TIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEV 215
Query: 334 ARKCTDSLKKIGY---TVPLS--------------------------------------Y 352
A K D ++ G ++ LS +
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAF 275
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
+ ++ ++CR G + +A + E ++ + G +I +L R R A + MK
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNV-EFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT--------CSAL--- 461
+G+K Y ++I K+ +A +++EE + + P+ T C L
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 462 ------------------------IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
+RG ++ P + NV M PD T + ++
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 498 TCLCKVGRSEEAMKLIFKMLDCGI-VPSTINFRTVFFGLNREGKRDLARVVLQQ 550
LCK+GR ++AMK++ M+ P + TV GL +G+ + A VL +
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNR 508
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 140/322 (43%), Gaps = 47/322 (14%)
Query: 277 SRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK 336
R+ ++ I ++C + R D+AL++ + G+ PD + + + LC+ G EA +
Sbjct: 53 DRAYWRRRIHSICAVR-RNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHR 111
Query: 337 CTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC-GSIIH 393
G+ +P + ++II L + L + ++G +K + +T +++
Sbjct: 112 RFLLFLASGF-IPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMN 170
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
L R+ DA + M+ +G + +T+LI + + +++ A ++ +EM+ G P
Sbjct: 171 QLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRP 230
Query: 454 NVVTCSALIRGYMNVERPIDA--------W-----------------NVFYRMKLKGPFP 488
N +T S LI G++ + R ++ W N+ M +G F
Sbjct: 231 NSLTLSVLIGGFLKM-RDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFN 289
Query: 489 D-FE---------------TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
D FE Y ++ LC+ R+ A ++++ M G+ P ++ +
Sbjct: 290 DIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAII 349
Query: 533 FGLNREGKRDLARVVLQQKSDL 554
GL ++G A +L++ S+
Sbjct: 350 HGLCKDGGCMRAYQLLEEGSEF 371
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 175/399 (43%), Gaps = 13/399 (3%)
Query: 157 DWSL-IQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPG---YKHTAESYN 212
DWS ++ +L++ + + FV+ VL+ ++ L FF WV Y+H+ +YN
Sbjct: 208 DWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYN 267
Query: 213 LAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKAD 272
A+++ ++ EM+ Y + +T+ + + + + + ++ +
Sbjct: 268 AALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDG 327
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
+ PS L+ L G +D ++ + + G K + + L VG
Sbjct: 328 PFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFD 387
Query: 333 EARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
EA + T +++ GY ++YS ++ LC+A ++EEA + + + A+ D T +
Sbjct: 388 EAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQ-MEAQGCFPDIKTWTIL 446
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF-FKEKQVGKAMEIIEEMQQSG 450
I + L+ ALA M ++G + ++ LI F K G ++ ++E ++ +
Sbjct: 447 IQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNAN 506
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDF-ETYSMLLTCLCKVGRSEEA 509
+P T LI + +++ +A ++ MK K +P + E + L K G E+A
Sbjct: 507 VKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK-KQNYPAYAEAFD---GYLAKFGTLEDA 562
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
K + +L PS + V REG+ A+ +L
Sbjct: 563 KKFL-DVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 176/439 (40%), Gaps = 57/439 (12%)
Query: 125 SEKVDCSLVLPH-----LKTYSERDVHEVCRILSSSMDWSL-IQEKLEKSAIRFTPEFVV 178
S +D ++P +T+S + + +L + DWS ++E L K + T E +
Sbjct: 36 SSPLDSFAIVPSRFLWKFRTFSSKPDSMLQLVLEN--DWSKEVEEGLRKPDMSLTHETAI 93
Query: 179 EVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNN 238
VL+ KY F WV + G + Y++ ++I V + K EM++
Sbjct: 94 YVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGG 153
Query: 239 YPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDD 298
+ + +T+ +YG + ++ KAD +A+ R
Sbjct: 154 FYLDEDTYKT---IYGELSK--------EKSKADA------------VAVAHFYER---- 186
Query: 299 ALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRA 358
LK + AG V + T CEV L+ K LS + +IR
Sbjct: 187 MLKENAMSVVAGEV---SAVVTKGDWSCEVERELQEMKLV-----------LSDNFVIRV 232
Query: 359 L--CRAGKVEEALALAGEVVGAEKSSLDQ---VTCGSIIHALLRKGRLEDALAKIDAMKQ 413
L R ++ ALA V G SS Q VT + + L R + + + +D MK
Sbjct: 233 LKELREHPLK-ALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKT 291
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP-I 472
G + + Y + F K + + + +++ E M ++P++ CS L+R P +
Sbjct: 292 AGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDL 351
Query: 473 D-AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
D + V + + G Y + L VGR +EA ++ M + G P I + +
Sbjct: 352 DLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQL 411
Query: 532 FFGLNREGKRDLARVVLQQ 550
FGL + + + AR VL Q
Sbjct: 412 VFGLCKAKRLEEARGVLDQ 430
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 56/285 (19%)
Query: 241 VTSETWTIMIML-YGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDA 299
+ SE + I IML YG G+ A F E+ + ++ L+ A K K+D+A
Sbjct: 119 IKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSK--KLDEA 176
Query: 300 LKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRA 358
+K + KEL E K+G T L +Y+ +I+A
Sbjct: 177 MKTF-----------KELPE-----------------------KLGITPDLVTYNTMIKA 202
Query: 359 LCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
LCR G +++ L++ E+ EK+ D ++ +++ R+ + D MK + +
Sbjct: 203 LCRKGSMDDILSIFEEL---EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNL 259
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM---NVERPID 473
I Y S + + K+ A+ +I+ M+ G P+V T +ALI Y N+E +
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR-------SEEAMK 511
+N MK KG PD TY ML+ LCK G SEEA+K
Sbjct: 320 CYN---EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
S++ ++ A + K++EA+ E+ + D VT ++I AL RKG ++D L+ +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
+++ G + + + +L+ F++ + + I + M+ PN+ + ++ +RG ++
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
DA N+ MK +G PD TY+ L+T EE MK +M + G+ P T+ +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 531 VFFGLNREGKRDLARVV 547
+ L ++G DL R V
Sbjct: 339 LIPLLCKKG--DLDRAV 353
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 5/278 (1%)
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
PSR Y + RK + ++ + K++ EM+ G PD T + C + G A
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAV 230
Query: 336 KCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHA 394
+ + + G ++ + +I A RAG V+ AL+L + EK +D VT ++I
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLY-DRARTEKWRIDAVTFSTLIRI 289
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
G + L + MK G+K + +Y LI + K+ +A I +++ +G+ PN
Sbjct: 290 YGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN 349
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR-SEEAMKLI 513
T +AL+R Y DA ++ MK KG Y+ LL+ +C R +EA ++
Sbjct: 350 WSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIF 408
Query: 514 FKMLDCGIV-PSTINFRTVFFGLNREGKRDLARVVLQQ 550
M +C P + F ++ G+ A L Q
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQ 446
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 5/315 (1%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIK 270
YN+ +K+ KD + LF EM + T+T +I + G+ A+ F+++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 271 ADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
+ G P T +I A GR G VD AL +Y D T + G+
Sbjct: 238 SFGCEPDNVTMAAMIDAY-GRAG-NVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 331 VLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
+ +K +G L Y+ +I ++ RA + +A + +++ + + T
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI-TNGFTPNWSTYA 354
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ- 448
+++ A R +DALA MK++G+ LT+ +Y +L+ + V +A EI ++M+
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNC 414
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
+P+ T S+LI Y R +A +M+ G P + ++ C K + ++
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 509 AMKLIFKMLDCGIVP 523
++ ++L+ GI P
Sbjct: 475 VVRTFDQVLELGITP 489
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 21/278 (7%)
Query: 197 WVRKQPGYKHTAESYNLAIKIAVSGK--DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
W K + ++ +A I G+ + +L+ R + + + T++ +I +YG
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
G + +N ++E+KA G P+ Y LI ++ GR R + +Y ++I G P+
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM-GRAKRPWQAKI-IYKDLITNGFTPN 349
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSL--------KKIGYTVPLSYSLIIRALCRAGK-V 365
TY + G AR D+L K + TV L +L+ ++C + V
Sbjct: 350 ---WSTYAALVRAYG---RARYGDDALAIYREMKEKGLSLTVILYNTLL--SMCADNRYV 401
Query: 366 EEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTS 425
+EA + ++ E D T S+I GR+ +A A + M++ G + T+ V TS
Sbjct: 402 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 426 LIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
+I + K KQV + +++ + G P+ C L+
Sbjct: 462 VIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLN 499
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 135/330 (40%), Gaps = 25/330 (7%)
Query: 223 DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYK 282
+F +LF E R N + + + G++G A+ F+E+ G +P Y
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK 342
LI C + K DA + EM G PD + G L G EA + ++
Sbjct: 436 TLIGGCCLQG--KCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 343 KIGY-TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEK---SSLDQVTC--GSIIHALL 396
G ++++++I L AG++++A A + + +S+ + C G + HA
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFE 553
Query: 397 RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ-VGKAMEIIEEMQQSGYEPNV 455
R RLE L K VY +L EK + KA ++++ M + G EP
Sbjct: 554 RFIRLEFPLPK-------------SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEK 600
Query: 456 VTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
LI + V A F + K PD TY++++ C++ ++A L
Sbjct: 601 SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFED 660
Query: 516 MLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
M + P + + + LN + + D+ R
Sbjct: 661 MKRRDVKPDVVTYSVL---LNSDPELDMKR 687
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
++ L + R+EDA + + M++ GI ++VY+++I K + KA+++ +M +
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR 356
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
N V S++++ Y + +A+++F + D Y++ L K+G+ EEA+
Sbjct: 357 KRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAI 416
Query: 511 KLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
+L +M GI P IN+ T+ G +GK
Sbjct: 417 ELFREMTGKGIAPDVINYTTLIGGCCLQGK 446
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 44/294 (14%)
Query: 278 RSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKC 337
+S Y L +LC K + A + M G P+K + +G C V +V +AR+
Sbjct: 564 KSVYFTLFTSLCAEKDY-ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 338 TDSL--KKIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH 393
+ L KKI VP +Y+++I CR + ++A AL E + D VT +++
Sbjct: 623 FEILVTKKI---VPDLFTYTIMINTYCRLNEPKQAYALF-EDMKRRDVKPDVVTYSVLLN 678
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
+ + L M+ + + YT +I + + K + ++M++ P
Sbjct: 679 S-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVP 731
Query: 454 NVVTCSALIRGY--MNVERPIDAWNV--------------------------FYRMKLKG 485
+VVT + L++ N+ R + A++V F +M G
Sbjct: 732 DVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESG 791
Query: 486 PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
PD Y+ L+ C CK+G +EA + +M++ G+ P + + + G R G
Sbjct: 792 VDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG 845
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 62/303 (20%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
T+TIMI Y R+ A F+++K P TY L+ D L M
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL---------NSDPELDMKR 687
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGK 364
EM +PD + Y+++I C
Sbjct: 688 EMEAFDVIPDV----------------------------------VYYTIMINRYCHLND 713
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
+++ AL ++ E + + + +L K + E L++ MK +K + YT
Sbjct: 714 LKKVYALFKDMKRRE------IVPDVVTYTVLLKNKPERNLSR--EMKAFDVKPDVFYYT 765
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR-----GYMNVERPIDAWNVFY 479
LI K +G+A I ++M +SG +P+ +ALI GY+ +A +F
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLK-----EAKMIFD 820
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG-LNRE 538
RM G PD Y+ L+ C+ G +A+KL+ +ML+ GI P+ + V + L +
Sbjct: 821 RMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAK 880
Query: 539 GKR 541
G R
Sbjct: 881 GLR 883
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 17/219 (7%)
Query: 268 EIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCE 327
+++ G P Y Y I RK + A+ ++ +M+ + ++ + L C C+
Sbjct: 316 DMEKHGIDPD--VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ 373
Query: 328 VGSVLEA-------RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+G+ EA R+ SL ++ Y V AL + GKVEEA+ L E+ G +
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFD------ALGKLGKVEEAIELFREMTG-KG 426
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ D + ++I +G+ DA + M G I +Y L +A
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 441 EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
E ++ M+ G +P VT + +I G ++ +D FY
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGLIDAGE-LDKAEAFY 524
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
YS II + + +A+ + +++ K ++ V SI+ + G +A
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKMLKKRKR-INCVIVSSILQCYCQMGNFSEAYDLFKEF 387
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
++ I L Y K +V +A+E+ EM G P+V+ + LI G +
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
DA+++ M G PD Y++L L G ++EA + + M + G+ P+ + V
Sbjct: 448 SDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 532 FFGLNREGKRDLA 544
GL G+ D A
Sbjct: 508 IEGLIDAGELDKA 520
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 53/349 (15%)
Query: 241 VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
VT TW I + + G +A+ F +K D SP+ T+ LI C K ++ A+
Sbjct: 164 VTYSTW---IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC--KAGDLEVAV 218
Query: 301 KMYGEM----INAGHVPDKELIETYLGCLCEVGSVLEA-----RKCTDSLKKIGYTVPLS 351
+Y EM ++ V LI+ + C+ G + A R D ++ L
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGF----CKKGEMQRAEEMYSRMVEDRVEP----NSLV 270
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
Y+ II + G + A+ +++ + LD G II L G+L++A ++ M
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLN-QGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG------- 464
++ + + ++T+++ +FK ++ A+ + ++ + G+EP+VV S +I G
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 465 -----YMNVERP--------IDAW----------NVFYRMKLKGPFPDFETYSMLLTCLC 501
Y +E+ IDA +F ++ G PD Y+ + LC
Sbjct: 390 HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC 449
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
K G +A KL +M+ G++ + + T+ +GL +G AR V +
Sbjct: 450 KQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDE 498
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 157/370 (42%), Gaps = 18/370 (4%)
Query: 184 CNKYGHNVLN---------FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM 234
CNK+ H ++N F +++ + GY S+N + K ++ M
Sbjct: 24 CNKHIHQLINSNCGILSLKFLAYLVSR-GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSM 82
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKAD-GY--SPSRSTYKYLIIALCGR 291
R ++ +I + R G A + ++A G+ P ++ L
Sbjct: 83 PRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF--S 140
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL- 350
K + +D+ G M+ P+ T++ C+ G + A K S+K+ + +
Sbjct: 141 KMKMLDEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVV 199
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDA 410
+++ +I C+AG +E A++L E+ + SL+ VT ++I +KG ++ A
Sbjct: 200 TFTCLIDGYCKAGDLEVAVSLYKEMRRV-RMSLNVVTYTALIDGFCKKGEMQRAEEMYSR 258
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M + ++ VYT++I FF+ AM+ + +M G ++ +I G +
Sbjct: 259 MVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGK 318
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+A + M+ PD ++ ++ K GR + A+ + K+++ G P + T
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 531 VFFGLNREGK 540
+ G+ + G+
Sbjct: 379 MIDGIAKNGQ 388
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 10/289 (3%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
GY+P RS++ ++ +C K +V A + M G PD + + C G +
Sbjct: 51 GYTPHRSSFNSVVSFVC--KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR 108
Query: 333 EARKCTDSLKKI-GYTVP---LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC 388
A +SL+ G+ +S++ + + ++E G V + S + VT
Sbjct: 109 SASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG--VMLKCCSPNVVTY 166
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
+ I + G L+ AL +MK+ + + +T LI + K + A+ + +EM++
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 449 SGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEE 508
NVVT +ALI G+ A ++ RM P+ Y+ ++ + G S+
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 509 AMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ--QKSDLI 555
AMK + KML+ G+ + + GL GK A +++ +KSDL+
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 292 KGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEA--RKCTDSLKKIGYTVP 349
K ++ A+ MY ++I G PD + T + + + G + EA C + + YTV
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV- 408
Query: 350 LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
+I ALC+ G E L ++ A D+ S I L ++G L DA
Sbjct: 409 -----LIDALCKEGDFIEVERLFSKISEAGLVP-DKFMYTSWIAGLCKQGNLVDAFKLKT 462
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M Q+G+ L + YT+LI + + +A ++ +EM SG P+ LIR Y
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Query: 470 RPIDAWNVFYRMKLKG 485
A ++ M+ +G
Sbjct: 523 NMAAASDLLLDMQRRG 538
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 40/336 (11%)
Query: 223 DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYK 282
D + +L+ EMRR + T+T +I + + G A + + D P+ Y
Sbjct: 213 DLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYT 272
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK 342
+I R D+A+K +M+N G D + LC G + EA + + ++
Sbjct: 273 TIIDGFFQRGDS--DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Query: 343 KIGYTVP--LSYSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRK 398
K VP + ++ ++ A ++G+++ A+ + +++ G E D V ++I + +
Sbjct: 331 K-SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP---DVVALSTMIDGIAKN 386
Query: 399 GRLEDALAK--------------IDAMKQQGIKLTIH----------------VYTSLIV 428
G+L +A+ IDA+ ++G + + +YTS I
Sbjct: 387 GQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
K+ + A ++ M Q G +++ + LI G + ++A VF M G P
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISP 506
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
D + +L+ K G A L+ M G+V +
Sbjct: 507 DSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTA 542
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 30/354 (8%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNL-------------FFEMRRNN 238
L+FF W +H +SY L I I V + R L + +
Sbjct: 97 LSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLDT 156
Query: 239 YPVTSET---WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRK 295
Y ++S T + +++ Y +I + + FK + G++ S T LI K
Sbjct: 157 YEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHY---SSKSK 213
Query: 296 VDDAL-KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL--KKIGYTVPLSY 352
+DD + ++Y I+ P++ I + LC+ G + E D + K+ +V ++
Sbjct: 214 IDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNT 273
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
SL+ R L ++EE+++L ++ + +D + +++A ++G L A D M
Sbjct: 274 SLVFRVL-EEMRIEESMSLLKRLL-MKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEML 331
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV---E 469
Q+G VYT + ++ V +A ++ EM++SG P T + LI G+ E
Sbjct: 332 QRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEE 391
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
+ ++ V M +G P ++ ++ + K+ A +++ K +D G VP
Sbjct: 392 KGLEYCEV---MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 329 GSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
G ++ ARK D + + G++ Y++ +R C G V+EA L E+ + S D+ T
Sbjct: 318 GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE-T 376
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
+I R G E L + M +G+ + + ++ K + V +A EI+ +
Sbjct: 377 FNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI 436
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
G+ P+ T S LIRG++ A +FY M+ + P FE + L+ LC G+ E
Sbjct: 437 DKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVE 496
Query: 508 EAMKLI 513
K +
Sbjct: 497 AGEKYL 502
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
+KE+ + GY + +T+ +I + C K K+ +AL ++ M+ G P+ +
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFC--KESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 326 CEVGSVLEARKCTDSLKKIG-----YTVP--LSYSLIIRALCRAGKVEEALALAGEVVGA 378
C+ G + R L K+G + P ++Y+ +I C+AG+++ A + G++V
Sbjct: 264 CKTG---DMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV-- 318
Query: 379 EKSSLD--QVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQV 436
KS +D + T G+++ A R G ++AL D M +G+ + +Y S++ F E +
Sbjct: 319 -KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDI 377
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
AM ++ +M + + T + ++RG +A ++ K D ++ L
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
+ + + A +++ ML G+ I+F T+ G +EGK + A
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERA 485
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 157/362 (43%), Gaps = 46/362 (12%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEM---RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCF 266
S+N+ I A D + L +M N + T+ +I + + G ++A
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 267 KEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLC 326
++ G + TY L+ A GR G D+AL++ EM + G V + + + + L
Sbjct: 315 GDMVKSGVDCNERTYGALVDAY-GRAGSS-DEALRLCDEMTSKGLVVNTVIYNSIVYWLF 372
Query: 327 EVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEA----------------- 368
G + A + + + ++++R LCR G V+EA
Sbjct: 373 MEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV 432
Query: 369 --------------LALAGEVVGA---EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
LA A +++G+ + SLD ++ G++I L++G+LE AL D M
Sbjct: 433 CHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+ + +Y S++ K G A ++ M+ ++VT + L+ +
Sbjct: 493 IKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNV 548
Query: 472 IDAWNVFYRMKLKGPFPDFE--TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+A ++ +M+ + T+++++ LCK G E+A +++ M++ G+VP +I +
Sbjct: 549 EEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYG 608
Query: 530 TV 531
T+
Sbjct: 609 TL 610
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQV-----------TCGS-------IIHAL 395
++I L + + ++AL++ ++ E L + CGS ++ A
Sbjct: 99 VMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRAC 158
Query: 396 LRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNV 455
+ G + A I+ + +G +++H + + ++ + ++ +EM GY NV
Sbjct: 159 TQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENV 218
Query: 456 VTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
T + +I + + +A +VFYRM G +P+ +++M++ CK G A++L+ K
Sbjct: 219 NTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGK 278
Query: 516 M-LDCG--IVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIR 556
M + G + P+ + + +V G + G+ DLA + + D+++
Sbjct: 279 MGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI---RGDMVK 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 145/349 (41%), Gaps = 38/349 (10%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
GY ++NL I ++F+ M + ++ +MI + G A
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 263 MNCFKEI---KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
+ ++ + SP+ TY +I C K ++D A ++ G+M+ +G ++
Sbjct: 273 LQLLGKMGMMSGNFVSPNAVTYNSVINGFC--KAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGA 378
+ GS EA + D + G V + Y+ I+ L G +E A+++ ++ +
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM-NS 389
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
+ +D+ T ++ L R G +++A+ + ++ + I + +L+ HF ++K++
Sbjct: 390 KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLAC 449
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYM---NVERPIDAWN-----------VFYRMKLK 484
A +I+ M G + ++ LI GY+ +ER ++ ++ V Y +
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Query: 485 G-----------------PFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
G D TY+ LL K G EEA ++ KM
Sbjct: 510 GLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 119/258 (46%), Gaps = 5/258 (1%)
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLSYS 353
++D K+Y EM + G+V + + C+ + EA + K G + +S++
Sbjct: 198 EIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFN 257
Query: 354 LIIRALCRAGKVEEALALAGE--VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
++I C+ G + AL L G+ ++ S + VT S+I+ + GRL+ A M
Sbjct: 258 MMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDM 317
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
+ G+ Y +L+ + + +A+ + +EM G N V ++++ ++ +E
Sbjct: 318 VKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY-WLFMEGD 376
Query: 472 ID-AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
I+ A +V M K D T ++++ LC+ G +EA++ ++ + +V + T
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 531 VFFGLNREGKRDLARVVL 548
+ R+ K A +L
Sbjct: 437 LMHHFVRDKKLACADQIL 454
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 41/356 (11%)
Query: 144 DVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPG 203
DVH + + S I+ L+K I T E V+EV+ V KQ
Sbjct: 80 DVHNIIKHHRGSSP-EKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSV 138
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
+ ++ YN + + + F+ +F EM + + V +T+ +++ Y + A+
Sbjct: 139 HLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAV 198
Query: 264 NCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLG 323
F+ K G + L++ LC K HV E ET L
Sbjct: 199 GVFERRKEFGIDDDLVAFHGLLMWLCRYK------------------HV---EFAET-LF 236
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL 383
C +R+ ++ G + + ++I+ C G V EA +++ A K
Sbjct: 237 C---------SRR-----REFGCDIK-AMNMILNGWCVLGNVHEAKRFWKDII-ASKCRP 280
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
D V+ G++I+AL +KG+L A+ AM + + ++I +K++ +A+E+
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVF 340
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP--FPDFETYSMLL 497
E+ + G +PNVVT ++L++ + R W + M+LKG P+ T+S LL
Sbjct: 341 REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 10/291 (3%)
Query: 224 FKHMR--NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
+KH+ F RR + + +++ + +G + A +K+I A P +Y
Sbjct: 226 YKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSY 285
Query: 282 KYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
+I AL +KG K+ A+++Y M + PD ++ + LC + EA + +
Sbjct: 286 GTMINALT-KKG-KLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREI 343
Query: 342 KKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEV-VGAEKSSLDQVTCGSIIHALLRKG 399
+ G + +Y+ +++ LC+ + E+ L E+ + S + VT + L
Sbjct: 344 SEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFS---YLLKYSQ 400
Query: 400 RLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCS 459
R +D ++ M + ++T +Y + + + + K EI EM++SG P+ T +
Sbjct: 401 RSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYT 460
Query: 460 ALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
I G + +A + F M KG P+ T MLL R E+ M
Sbjct: 461 IRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT-EMLLNQNKTKPRVEDKM 510
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 15/238 (6%)
Query: 300 LKMYGEMINAGH------------VP-DKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
+KM GE+ H VP D+++ + + G V E+ K +K +G
Sbjct: 157 IKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGV 216
Query: 347 TVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
+ SY+ + + + R G+ A ++V +E + T ++ RLE AL
Sbjct: 217 ERTIKSYNSLFKVILRRGRYMMAKRYFNKMV-SEGVEPTRHTYNLMLWGFFLSLRLETAL 275
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+ MK +GI + ++I F + K++ +A ++ EM+ + P+VV+ + +I+GY
Sbjct: 276 RFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
+ V+R D +F M+ G P+ TYS LL LC G+ EA ++ M+ I P
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 154/393 (39%), Gaps = 47/393 (11%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
K G + T +SYN K+ + + + F +M T T+ +M+ +
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALC-------------GRKGRK----------- 295
A+ F+++K G SP +T+ +I C KG K
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTM 331
Query: 296 ---------VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
VDD L+++ EM ++G P+ T L LC+ G ++EA+ ++ +
Sbjct: 332 IKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA-KH 390
Query: 347 TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKS---SLDQVTCGSIIHALLRKGRLED 403
P S+ ++ L K + +A A EV+ A + + G +I +
Sbjct: 391 IAPKDNSIFLKLLVSQSKAGD-MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNR 449
Query: 404 ALAKIDAM--------KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNV 455
A+ +D + Q +++ Y +I + Q KA + ++ + G + +
Sbjct: 450 AIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQ 508
Query: 456 VTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFK 515
+ LIRG+ P ++ + M +G + Y +L+ G +A +
Sbjct: 509 DALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDS 568
Query: 516 MLDCGIVPSTINFRTVFFGLNREGKRDLARVVL 548
M++ G VP + FR+V L +G+ A V+
Sbjct: 569 MVEDGHVPDSSLFRSVIESLFEDGRVQTASRVM 601
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 161/383 (42%), Gaps = 18/383 (4%)
Query: 148 VCRILSSSMDWSLIQEKLEKSAIRFTPEF----VVEVLQICNKYGHNVLNFFSWVRKQPG 203
+CR++ + W+ +L+ S PE+ V VL K H L FF W +
Sbjct: 91 ICRMMDNRA-WT---TRLQNSIRDLVPEWDHSLVYNVLHGAKKLEH-ALQFFRWTERSGL 145
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAM 263
+H +++ IK+ H R + +M P + + ++I YG+ G+ ++
Sbjct: 146 IRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESV 205
Query: 264 NCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLG 323
F+++K G + +Y L + R+GR + A + + +M++ G P + L
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVIL-RRGRYM-MAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSS 382
+ A + + +K G + +++ +I CR K++EA L E+ G K
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG-NKIG 322
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
V+ ++I L R++D L + M+ GI+ Y++L+ ++ +A I
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPID---AWNVFYRMKLKGPFPDFETYSMLLTC 499
++ M P S ++ ++ + D A V M + Y +L+
Sbjct: 383 LKNMMAKHIAPK--DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIEN 440
Query: 500 LCKVGRSEEAMKLIFKMLDCGIV 522
CK A+KL+ +++ I+
Sbjct: 441 QCKASAYNRAIKLLDTLIEKEII 463
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 136/342 (39%), Gaps = 17/342 (4%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
L FF ++ + G ++N I K LF EM+ N + ++T MI
Sbjct: 274 ALRFFEDMKTR-GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
Y + + + F+E+++ G P+ +TY L+ LC K+ +A + M+ A
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLC--DAGKMVEAKNILKNMM-AK 389
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG-YTVPLS---YSLIIRALCRAGKVE 366
H+ K+ +L L + T+ LK + VP Y ++I C+A
Sbjct: 390 HIAPKD-NSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYN 448
Query: 367 EALALAGEVVGAE-------KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
A+ L ++ E ++ II L G+ A + ++G++
Sbjct: 449 RAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-D 507
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
+LI KE + EI++ M + G LI+ YM+ P DA
Sbjct: 508 QDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALD 567
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
M G PD + ++ L + GR + A +++ M+D +
Sbjct: 568 SMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 165/407 (40%), Gaps = 16/407 (3%)
Query: 137 LKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICN------KYGHN 190
L+ +RD+ ++ +I +S + +++ K A RFT + + N +
Sbjct: 423 LEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQD 482
Query: 191 VLNFFSWVR--KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI 248
+ +R ++ G + Y I M +F +M + T+
Sbjct: 483 IEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGA 542
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I R G A + +++ P R + LI A CG+ G VD A + EM
Sbjct: 543 LIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA-CGQSG-AVDRAFDVLAEMKA 600
Query: 309 AGHV--PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPLSYSLIIRALCRAGKV 365
H PD I + C G V A++ + K G P Y++ + + ++G
Sbjct: 601 ETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDW 660
Query: 366 EEALALAGEVVGAEKS-SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
+ A ++ ++ EK + D+V ++I L++A + K QGI+L Y+
Sbjct: 661 DFACSIYKDM--KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYS 718
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
SL+ K KA+E+ E+++ P + T +ALI + A +K
Sbjct: 719 SLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTL 778
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
G P+ TYSML+ + E + KL+ + G+ P+ I R +
Sbjct: 779 GLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCI 825
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 419 TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVF 478
T Y S+I F K+ +V A +++ M G P+VVT S LI GY +R + +F
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 479 YRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
M +G + TY+ L+ C+VG + A L+ +M+ CG+ P I F + GL +
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 539 GKRDLARVVLQ--QKSD 553
+ A +L+ QKS+
Sbjct: 129 KELRKAFAILEDLQKSE 145
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
+T S+I ++ R++DA +D+M +G + +++LI + K K+V MEI E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
M + G N VT + LI G+ V A ++ M G PD+ T+ +L LC
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
P +T +++I G+ +R DA + M KG PD T+S L+ CK R + M++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 513 IFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+M GIV +T+ + T+ G + G D A+ +L +
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 105
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 9/278 (3%)
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
Y+P + L AL K K + + G P+ L+E Y+ CL E G V E
Sbjct: 109 YTPGPVSLNILFGALLDGKAVKAAKSF-----LDTTGFKPEPTLLEQYVKCLSEEGLVEE 163
Query: 334 ARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII 392
A + + LK +G + + + + ++ +A K++ L E+V +E S +++ C +I
Sbjct: 164 AIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDS-ERIRC--LI 220
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
AL G + + + +QG+ +VY LI F + E++ M +
Sbjct: 221 RALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF 280
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
P++ +I+G ++ ++A+ +F +K KG PD Y+ ++ C+ G A KL
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 513 IFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
F+M+ G+ P+ + + G + G+ L +
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNE 378
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 154/391 (39%), Gaps = 45/391 (11%)
Query: 174 PEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFE 233
P F E+L+ N + L FF W+ Y S N+ + GK K ++
Sbjct: 80 PLFFGELLKSQNNVLFS-LWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDT 138
Query: 234 MRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
P E + + GL A+ + +K G S S T +++ K
Sbjct: 139 TGFKPEPTLLEQY---VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCL--KA 193
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEA------------------- 334
RK+D +++ EM+ + D E I + LC+ G V E
Sbjct: 194 RKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVY 251
Query: 335 RKCTDSLKKIGYTVPLS-----------------YSLIIRALCRAGKVEEALALAGEVVG 377
K +IG +S Y II+ LC K EA + + +
Sbjct: 252 AKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF-KNLK 310
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
+ + D+V ++I KG L A M ++G++ Y +I FK ++
Sbjct: 311 DKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEIS 370
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
EM ++GY +++C+ +I+G+ + + +A+ +F M G P+ TY+ L+
Sbjct: 371 LVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALI 430
Query: 498 TCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
CK + E+ +KL ++ G+ PS + +
Sbjct: 431 KGFCKENKVEKGLKLYKELKALGLKPSGMAY 461
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 4/226 (1%)
Query: 273 GYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVL 332
G P + Y LI C ++ MI H P + + + LC L
Sbjct: 243 GLDPGQYVYAKLISGFCEIGNYACMS--EVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 333 EARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSI 391
EA +LK GY + Y+ +IR C G + A L E++ + ++ +
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI-KKGMRPNEFAYNVM 359
Query: 392 IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY 451
IH ++G + A + M + G T+ ++I F + +A EI + M ++G
Sbjct: 360 IHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV 419
Query: 452 EPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
PN +T +ALI+G+ + ++ +K G P Y+ L+
Sbjct: 420 TPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 370 ALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
+ A EV+G K S+ + +II GRL++A +++M+++GI + YT L+
Sbjct: 777 SFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILM 836
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
+ + A+++ E + EP+ V S L++G + +RP+DA + M+ G
Sbjct: 837 KSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGIN 893
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVV 547
P+ ++Y LL CLC + EA+K++ M I P +IN + + L E K AR +
Sbjct: 894 PNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARAL 953
Query: 548 L 548
Sbjct: 954 F 954
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 135/320 (42%), Gaps = 5/320 (1%)
Query: 237 NNYPVTSETWTIMIMLYGRIGLTNMAMNCFKE-IKADGYSPSRSTYKYLIIALCGRKGRK 295
N + S + +I +G +A + + + +G P S ++ C K R+
Sbjct: 89 NGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMV--FCLVKLRR 146
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSL 354
D+A +I +G+ P + + LC LEA C + +K+ G + L
Sbjct: 147 FDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKR 206
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQ 414
+ + LC G + EA+ + + G + L S+ + ++G +A A D M+
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 415 GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDA 474
G + +YT L+ + K+ + AM + M + +E + + LI G+M +
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 475 WNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN-FRTVFF 533
+F +M KG + TY +++ CK G + A++L + ++ + + F
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 534 GLNREGKRDLARVVLQQKSD 553
G ++G D A +L + D
Sbjct: 387 GFYKKGGMDKAVDLLMRMLD 406
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 139/343 (40%), Gaps = 34/343 (9%)
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCF-KEIKADGYSPSRSTYKYLII 286
R +F +M + T+ IMI Y + G + A+ F ++ S + Y LI
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 287 ALCGRKGRKVDDALKMYGEMINAGHVPDK----ELIETYLGC------LCEVGSVLEA-- 334
+ G +D A+ + M++ G VPD L++ C + + S+L+
Sbjct: 387 GFYKKGG--MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGC 444
Query: 335 ---RKCTDSLKKIGYTV---------------PLSYSLIIRALCRAGKVEEALALAGEVV 376
D L I V + +++ ALC AL+ ++V
Sbjct: 445 GINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMV 504
Query: 377 GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQV 436
+ L + S+I L ++ +ED + ++ +++ + Y ++ K+
Sbjct: 505 NLGCTPL-PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 437 GKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
A II+ M++ G P V S++I R ++A F +M G PD Y ++
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+ + GR +EA +L+ +++ + PS+ + + G + G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 121/276 (43%), Gaps = 10/276 (3%)
Query: 287 ALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
ALC + R AL +M+N G P + + CL + + + + ++++ +
Sbjct: 486 ALCSQ--RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDF 543
Query: 347 TVPL-SYSLIIRALCRAGKVEEALAL--AGEVVGAEKSSLDQVTCGSIIHALLRKGRLED 403
+ +Y +++ LC+ + A A+ A E +G + SII +L ++GR+ +
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTV---AIYSSIIGSLGKQGRVVE 600
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
A M + GI+ Y +I + + ++ +A E++EE+ + P+ T + LI
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
G++ + +M G P+ Y+ L+ K G + + L M + I
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH 720
Query: 524 STINFRTVFFGLNREGKRDLARVVLQQ--KSDLIRR 557
I + T+ GL R R R V+ + K L++R
Sbjct: 721 DHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQR 756
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 128/310 (41%), Gaps = 10/310 (3%)
Query: 240 PVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDA 299
P+ + + + + G A F ++ DGY + Y L+ C K + A
Sbjct: 234 PLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYC--KDNNMTMA 291
Query: 300 LKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY-TVPLSYSLIIRA 358
+++Y M+ D + T + ++G + + R + K G + +Y ++I +
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 359 LCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKL 418
C+ G V+ AL L G+E S + ++I +KG ++ A+ + M GI
Sbjct: 352 YCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 419 TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVF 478
Y L+ K ++ AM I++ + +G N +I N+E +++ +
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVILQSILDNGCGIN----PPVIDDLGNIEVKVES--LL 465
Query: 479 YRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
+ K +++ T LC A+ I KM++ G P ++ +V L +E
Sbjct: 466 GEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Query: 539 G-KRDLARVV 547
DLA +V
Sbjct: 526 NIIEDLASLV 535
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 156/374 (41%), Gaps = 43/374 (11%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
+ G++ + SY + K + + ++ E+ ++ + S + +I + G
Sbjct: 73 ETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNME 132
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLI--IALCGRKGRKVDDALKMYGEMINAGHVPDKELI 318
A+ ++K G +P+ STY LI + G+ R + L + E N P+
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS-SELLDLMLEEGNVDVGPNIRTF 191
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALA---LAGEV 375
+ C+ V EA + +++ G P + + A C K E A + ++
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVR-PDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Query: 376 VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHF----- 430
V EK+ + TCG ++ R+GR+ D L + MK+ ++ + V+ SLI F
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 431 ----------FKEKQVG--------------------KAMEIIEEMQQSGYEPNVVTCSA 460
KE V KA ++ +EM ++G +P+ S
Sbjct: 311 RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
L +GY+ + P A + + ++ P+ ++ +++ C G ++AM++ KM G
Sbjct: 371 LAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 429
Query: 521 IVPSTINFRTVFFG 534
+ P+ F T+ +G
Sbjct: 430 VSPNIKTFETLMWG 443
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ L E G EA+ +L + G+ L SY+ ++ A+ + ++ EV +
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-G 110
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ LD + ++I+A G +EDA+ + MK+ G+ T Y +LI + + ++
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 441 EIIEEMQQSG---YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
E+++ M + G PN+ T + L++ + ++ +AW V +M+ G PD TY+ +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 498 TCLCKVGRSEEA-MKLIFKML----------DCGIVPSTINFRTVFFGLNREGK-RDLAR 545
TC + G + A +++ KM+ CGI V G REG+ RD R
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI---------VVGGYCREGRVRDGLR 281
Query: 546 VVLQQK 551
V + K
Sbjct: 282 FVRRMK 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 38/179 (21%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+++ L+ +GR +A + + G + ++ YT+L+ +KQ G I+ E++QSG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 451 YE-----------------------------------PNVVTCSALIRGYMNVERPIDAW 475
+ P T + LI+GY +P +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 NVFYRMKLKGPF---PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ M +G P+ T+++L+ CK + EEA +++ KM +CG+ P T+ + T+
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 141/392 (35%), Gaps = 84/392 (21%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
+Q G K + +N I + + +M+ T+ T+ +I YG G
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 260 NMAMNCFKEIKADG---YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
+ + +G P+ T+ L+ A C +K KV++A ++ +M G PD
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK--KVEEAWEVVKKMEECGVRPDTV 224
Query: 317 LIETYLGCLCEVGSVLEARK-------CTDSLKKIGYTVPLSYSLIIRALCRAGKVEEAL 369
T C + G + A + K G T +++ CR G+V + L
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC----GIVVGGYCREGRVRDGL 280
Query: 370 A--------------------LAGEVVGAEKSSLDQV--------------TCGSIIHAL 395
+ G V ++ +D+V T ++++A
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW 340
Query: 396 LRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE----------- 444
G +E A M + G+K H Y+ L + + K+ KA E++E
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVV 400
Query: 445 -----------------------EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
+M + G PN+ T L+ GY+ V++P A V M
Sbjct: 401 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
+ G P+ T+ +L G ++E+ K I
Sbjct: 461 RGCGVKPENSTFLLLAEAWRVAGLTDESNKAI 492
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 160/397 (40%), Gaps = 37/397 (9%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM 251
L+F S P ++N I + NLF EM ++ P+ + T+ MI
Sbjct: 289 LHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIH 348
Query: 252 LYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
G G + A + K+++ G SP TY ++++L G ++ AL+ Y ++ G
Sbjct: 349 TCGTHGHLSEAESLLKKMEEKGISPDTKTYN-ILLSLHADAG-DIEAALEYYRKIRKVGL 406
Query: 312 VPDKELIETYLGCLCEVGSVLE-----ARKCTDSLKKIGYTVP------LSYSLIIRALC 360
PD L LC+ V E A +S++ ++VP ++ L+++A
Sbjct: 407 FPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKA 466
Query: 361 RAGK-------------------VEEALALAGEVVGAEKSSL-----DQVTCGSIIHALL 396
+ E+ L + E V K ++ D + +I A
Sbjct: 467 LFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG 526
Query: 397 RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVV 456
+ E AL+ MK QG Y SL V +A I+ EM SG +P
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 457 TCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
T +A+I Y+ + DA +++ M+ G P+ Y L+ + G EEA++ M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 517 LDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSD 553
+ G+ + I ++ ++ G + AR V + D
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 193/460 (41%), Gaps = 46/460 (10%)
Query: 7 SRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDE 66
+ H+SEA + K ME +GI P K+Y + + A E L+ +++ + D
Sbjct: 352 THGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGL-FPDT 410
Query: 67 VFHWVITYL--ENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFV--GIKVEEDVRVDQ 122
V H + ++ + K V+ + +M S E Q++V G+ V+ ++
Sbjct: 411 VTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER 470
Query: 123 LKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDW----SLIQEKLEKSAIRFTPEFVV 178
++DC L S + V + + W ++ K S R V+
Sbjct: 471 F---QLDCVL--------SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR---NDVL 516
Query: 179 EVLQICNKYG-----HNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFE 233
E + YG L+ F ++ Q + +YN ++ + + E
Sbjct: 517 EYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDEC-TYNSLFQMLAGVDLVDEAQRILAE 575
Query: 234 MRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
M + +T+ MI Y R+GL + A++ ++ ++ G P+ Y LI +
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA--ES 633
Query: 294 RKVDDALKMYGEM----INAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKI--GYT 347
V++A++ + M + + H+ LI+ Y +VG + EAR+ D +K G
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAY----SKVGCLEEARRVYDKMKDSEGGPD 689
Query: 348 VPLSYSLIIRALCR-AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
V S S++ +LC G V EA ++ + EK + D ++ ++++ G L++A+
Sbjct: 690 VAASNSML--SLCADLGIVSEAESIFNAL--REKGTCDVISFATMMYLYKGMGMLDEAIE 745
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
+ M++ G+ + ++ + + Q+ + E+ EM
Sbjct: 746 VAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 146/345 (42%), Gaps = 8/345 (2%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
L ++ +RK + T ++ + I K + + EM RN+ + + +++
Sbjct: 394 ALEYYRKIRKVGLFPDTV-THRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIM 452
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+Y GL A F+ + D ST +I + KG V+ YG+ +G
Sbjct: 453 QMYVNEGLVVQAKALFERFQLD--CVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRALCRAGKVEEA 368
D + + +A +K G T P +Y+ + + L V+EA
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG-TWPDECTYNSLFQMLAGVDLVDEA 569
Query: 369 LALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
+ E++ + T ++I + +R G L DA+ +AM++ G+K VY SLI
Sbjct: 570 QRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
F + V +A++ M++ G + N + ++LI+ Y V +A V+ +MK P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
D + +L+ +G EA + IF L I+F T+ +
Sbjct: 689 DVAASNSMLSLCADLGIVSEA-ESIFNALREKGTCDVISFATMMY 732
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 109/545 (20%), Positives = 212/545 (38%), Gaps = 51/545 (9%)
Query: 7 SRNHISEAWKIFKSMEYQGIKPTWKS-YTVFIKELCKASRTEDILKVLDEMQASKIAIRD 65
+RN I ++ + KP S + I KA R D + EM S + I
Sbjct: 281 ARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDT 340
Query: 66 EVFHWVITYLENKGEFAVKEKVQQMHTASKLAPEKFSESKKQVFVGIKVEE-DVRVDQLK 124
F+ +I G + E + + ++P+ + + + + D+
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDT---KTYNILLSLHADAGDIEAALEY 397
Query: 125 SEKVDCSLVLPHLKTYSERDV-HEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQI 183
K+ + P T + R V H +C+ + ++I E +++++IR V ++Q+
Sbjct: 398 YRKIRKVGLFP--DTVTHRAVLHILCQRKMVAEVEAVIAE-MDRNSIRIDEHSVPVIMQM 454
Query: 184 CNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS 243
G V + R Q ++ + I + + +F+ +RN +
Sbjct: 455 YVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYG-KRNMSGQRN 513
Query: 244 ET--WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALK 301
+ + +MI YG+ L A++ FK +K G P TY L L G VD+A +
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVD--LVDEAQR 571
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALC 360
+ EM+++G P + + +G + +A ++++K G + Y +I
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
+G VEEA+ ++ + + S+I A + G LE+A D MK +
Sbjct: 632 ESGMVEEAIQYF-RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 421 HVYTSL---------------IVHFFKEK-------------------QVGKAMEIIEEM 446
S+ I + +EK + +A+E+ EEM
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL-KGPFPDFETYSMLLTCLCKVGR 505
++SG + + + ++ Y + + +F+ M + + D+ T+ L T L K G
Sbjct: 751 RESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGV 810
Query: 506 SEEAM 510
EA+
Sbjct: 811 PSEAV 815
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 157/375 (41%), Gaps = 22/375 (5%)
Query: 168 SAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHM 227
S I P+ +++ L + + G L F W+ + HT E+ + + KDFK M
Sbjct: 103 SHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGM 162
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKAD-GYSPSRSTYKYLII 286
+ + + T E+ ++ R G + F++++ D G + + ++
Sbjct: 163 LEIISKYKGIAGGKTLESAIDRLV---RAGRPKQVTDFFEKMENDYGLKRDKESLTLVVK 219
Query: 287 ALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
LC + + A KM N PD+ + + + C + EA + + + G+
Sbjct: 220 KLCEKGHASI--AEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGF 276
Query: 347 TVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEKSSL---------DQVTCGSIIHALL 396
+ +Y++++ +C+ + ++ L EV EK L + T +I+ L
Sbjct: 277 EIGTKAYNMMLDCVCKLCRKKDPFKLQPEV---EKVLLEMEFRGVPRNTETFNVLINNLC 333
Query: 397 RKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP--N 454
+ R E+A+ M + G + Y LI ++ ++G+ E+I++M+ +GY N
Sbjct: 334 KIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLN 393
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
++ +ER A +VF MK G P +TY +L+ +C + A L
Sbjct: 394 KKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYK 453
Query: 515 KMLDCGIVPSTINFR 529
+ GI S +R
Sbjct: 454 EAAKKGIAVSPKEYR 468
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 143/329 (43%), Gaps = 48/329 (14%)
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
EM + TW I+I Y ++G + AM+ ++++ G + T+ +I L
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSY 352
R AL M+ +M AG VP+ I S + A C
Sbjct: 332 MRY--QALDMFRKMFLAGVVPNAVTIM----------SAVSACSC--------------- 364
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG-SIIHALLRKGRLEDALAKIDAM 411
++ + + +V + + +D V G S++ + G+LEDA D++
Sbjct: 365 ---LKVINQGSEVHS--------IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
K + ++ + S+I + + GKA E+ MQ + PN++T + +I GY+
Sbjct: 414 KNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 472 IDAWNVFYRMKLKGPFP-DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+A ++F RM+ G + T+++++ + G+ +EA++L KM +P+++ +
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 531 VFFG----LNREGKRDLARVVLQQKSDLI 555
+ L + R++ VL++ D I
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAI 558
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 141/360 (39%), Gaps = 53/360 (14%)
Query: 228 RNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI-- 285
R +F MR N TW+ MI Y R F+ + DG P + ++
Sbjct: 135 RKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
A CG V+ ++ +I G + + L + G E T +++
Sbjct: 191 CANCG----DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG---ELDFATKFFRRMR 243
Query: 346 YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL 405
++++ ++ A C+ GK EEA+ L E+ E S VT +I + G+ + A+
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEME-KEGISPGLVTWNILIGGYNQLGKCDAAM 302
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT-------C 458
+ M+ GI + +T++I +A+++ +M +G PN VT C
Sbjct: 303 DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 459 S----------------------------ALIRGYMNVERPIDAWNVFYRMKLKGPFPDF 490
S +L+ Y + DA VF +K K D
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DV 418
Query: 491 ETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
T++ ++T C+ G +A +L +M D + P+ I + T+ G + G A + Q+
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
LF M+ N TW MI Y + G AM+ F+ ++ DG + LIIA
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYL-GCLCEVGS--VLEARKCT-----DSL 341
+ G+K D+AL+++ +M + +P+ I + L C +G+ V E C D++
Sbjct: 500 IQNGKK-DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAI 558
Query: 342 KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
+ + +Y+ ++G +E + + +G E D +T S+I + G
Sbjct: 559 HAVKNALTDTYA-------KSGDIEYSRTI---FLGMETK--DIITWNSLIGGYVLHGSY 606
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGY-EPNVVTCSA 460
ALA + MK QGI +S+I+ V + ++ + + P + CSA
Sbjct: 607 GPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSA 666
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
++ Y R +A M ++ P +E++
Sbjct: 667 MVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 149/361 (41%), Gaps = 48/361 (13%)
Query: 194 FFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLY 253
FF+WV+ + + YN+ +K G+ F+ + + EM ++ + + T++ +I
Sbjct: 172 FFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCA 231
Query: 254 GRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVP 313
R L N A+ F+ + G P TY I+ + + G KV++ L +Y + G P
Sbjct: 232 KRCNLYNKAIEWFERMYKTGLMPDEVTYSA-ILDVYSKSG-KVEEVLSLYERAVATGWKP 289
Query: 314 DKELIETYLGCLCEVGS------VLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEE 367
D E G VL+ K D + + Y+ ++ A+ RAGK
Sbjct: 290 DAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNV-----VVYNTLLEAMGRAGKPGL 344
Query: 368 ALALAGEVV----------------------------------GAEKSSLDQVTCGSIIH 393
A +L E++ A+K +D + ++++
Sbjct: 345 ARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN 404
Query: 394 ALLRKGRLEDALAKIDAMKQQ-GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
G E+A + MK+ + YT+++ + + KAME+ EEM ++G +
Sbjct: 405 MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
NV+ C+ L++ +R D VF +G PD LL+ + SE+A K+
Sbjct: 465 VNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
Query: 513 I 513
+
Sbjct: 525 M 525
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 15/299 (5%)
Query: 241 VTSETWTIMIMLYGRIGLTNMAMN---CFKEIKADGYSPSRSTYKYLIIALCGRKGRKVD 297
++SE ++ I YG G + A C +E+ R+ +Y ++ + +
Sbjct: 469 MSSEGYSANIDAYGERGYLSEAERVFICCQEVN------KRTVIEYNVMIKAYGISKSCE 522
Query: 298 DALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLII 356
A +++ M++ G PDK T + L + R + +++ GY + Y +I
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVI 582
Query: 357 RALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
+ + G++ A + E+V D V G +I+A G ++ A++ ++AMK+ GI
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEP-DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE---PNVVTCSALIRGYMNVERPID 473
+Y SLI + K + +A I ++ QS + P+V T + +I Y
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
A +F MK +G +F T++M+L K GR EEA ++ +M + I+ +++ +V
Sbjct: 702 AEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 188/475 (39%), Gaps = 27/475 (5%)
Query: 1 MVAGHVSRNHISEAWKIFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASK 60
+++ H N I A FK M+ G+KP SY + E+ ++ EM
Sbjct: 373 LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDN 432
Query: 61 IAIRDEVFHWVITYLENKGEFAVK--EKVQQMHTASKLAPEKFSESKKQVFVGIKVEEDV 118
+ I DE +T + + E K ++ H A ++ E +S + + E
Sbjct: 433 VEI-DEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAE 491
Query: 119 RVDQLKSEKVDCSLVLPH---LKTYS-ERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTP 174
RV + ++V+ V+ + +K Y + + C + S M + + +K T
Sbjct: 492 RV-FICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC-------TY 543
Query: 175 EFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM 234
+V++L + H + +R + GY Y I V ++ EM
Sbjct: 544 NTLVQILASAD-MPHKGRCYLEKMR-ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
N + ++I + G AM+ + +K G P S +I L + G
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI-PGNSVIYNSLIKLYTKVGY 660
Query: 295 KVDDALKMYGEMI---NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS 351
+D+A +Y +++ N PD + E V +A DS+K+ G +
Sbjct: 661 -LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT 719
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
+++++ + G+ EEA +A ++ K D ++ S++ GR ++A+ M
Sbjct: 720 FAMMLCMYKKNGRFEEATQIAKQMR-EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEM 778
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS----GYEPNVVTCSALI 462
GI+ + SL K KA+ IEE+++ G E + T S+L+
Sbjct: 779 VSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLV 833
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 138/349 (39%), Gaps = 34/349 (9%)
Query: 201 QPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTN 260
+ G T ++N I I + + +L M+ + P T T+ I+I L+ +
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDT-RTYNILISLHTKNNDIE 384
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALC---------GRKGRKVDDAL----------- 300
A FKE+K DG P +Y+ L+ A G DD +
Sbjct: 385 RAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALT 444
Query: 301 KMY--GEMINAG-------HVPDKELIETY---LGCLCEVGSVLEARKCTDSLKKIGYTV 348
+MY EM+ HV E Y + E G + EA + +++
Sbjct: 445 RMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRT 504
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
+ Y+++I+A + E+A L E + + + D+ T +++ L +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELF-ESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNV 468
+ M++ G Y ++I F K Q+ A E+ +EM + EP+VV LI + +
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 469 ERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML 517
A + MK G + Y+ L+ KVG +EA + K+L
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 142/348 (40%), Gaps = 19/348 (5%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
+ F W + + Y+ YN+ ++I ++++++L+ EM R + T+ +I
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+Y + GL A+ ++ G P T I+ +K R+ A + + +
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTG--IVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 311 HVPDKELI---ETYLGCLCEVGSVLEARKCTDSLKKI--GYTVP--LSYSLIIRALCRAG 363
+ D + TY + G + ++ +++ K++ VP ++++ +I G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
++ E +L + + D T +I + +E A A MK G+K Y
Sbjct: 348 QLGEVTSLMKTM--KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+L+ F V +A +I EM E + T SAL R Y+ E +W+ F R +
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHV 465
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
G E YS + + G EA ++ I +N RTV
Sbjct: 466 AGNMSS-EGYSANIDAYGERGYLSEAERVF-------ICCQEVNKRTV 505
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 124/249 (49%), Gaps = 24/249 (9%)
Query: 277 SRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK 336
S+ + II+L G+ G ++A K++ EM P+++ + L + S K
Sbjct: 107 SKEGFAARIISLYGKAGM-FENAQKVFEEM------PNRDCKRSVLS-FNALLSAYRLSK 158
Query: 337 CTDSLKKIGYTVP---------LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQ 385
D ++++ +P +SY+ +I+ALC + EA+AL E+ E L D
Sbjct: 159 KFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEI---ENKGLKPDI 215
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEE 445
VT +++ + KG+ E M ++ + + I Y + ++ E + + + + E
Sbjct: 216 VTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGE 275
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK-GPFPDFETYSMLLTCLCKVG 504
++ SG +P+V + +A+IRG +N E +D +Y+ +K G PD T+++LL +CK G
Sbjct: 276 LKASGLKPDVFSFNAMIRGSIN-EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Query: 505 RSEEAMKLI 513
E A++L
Sbjct: 335 DFESAIELF 343
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 184/427 (43%), Gaps = 35/427 (8%)
Query: 110 VGIKVEED-VRVDQLKSEKV---DCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKL 165
VG K ++D + D L+ K+ DC L +E VC+I+ +++++
Sbjct: 191 VGDKFQKDGLESDLLRLRKLFTSDC------LDNSAENVCDRVCKIVMKEEWGDDVEKRV 244
Query: 166 EKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFK 225
+ F + V +++ + L FF W+ + +KH ++YN ++ K
Sbjct: 245 RDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLD 304
Query: 226 HMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS----PSRSTY 281
+N+ EMR Y V ET+ + + + L A++ F EI G S P+ +
Sbjct: 305 RFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLF-EIAMAGSSSSNNPTPHCF 363
Query: 282 KYLIIALCGRKGRKVD---DALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCT 338
L+ + K +D A+K+Y G+ L+++ L L V V ++ +
Sbjct: 364 CLLLKKIVTAKILDMDLFSRAVKVY---TKNGNALTDSLLKSVLKSLRSVDRVEQSNELL 420
Query: 339 DSLKKIGYTVPLS--YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALL 396
+K+ GY VP S+I +L R GK +EA + + + ++LD S++
Sbjct: 421 KEMKRGGY-VPSGDMQSMIASSLSRKGKKDEADEFV-DFMESSGNNLDDKAMASLVEGYC 478
Query: 397 RKGRLEDALAKIDAM-KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE-EMQQSGYEPN 454
G L++AL + M G+ + + L++ + + QV A +++ ++ ++ +P
Sbjct: 479 DSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPR 538
Query: 455 VVTCSALIRGYMNVERPID-----AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
T +L+ + + D A ++ MK G FP F ++ G+S EA
Sbjct: 539 HSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHG-FPPF--IDPFMSYFSSTGKSTEA 595
Query: 510 MKLIFKM 516
+ + M
Sbjct: 596 LGFLKAM 602
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 266 FKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCL 325
F E++ G PS +TY L+ A R PD ++ET L +
Sbjct: 402 FTEMRDKGLKPSAATYNILMDAYARR-------------------MQPD--IVETLLREM 440
Query: 326 CEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALA---LAGEVVGAEKSS 382
++G + SY+ +I A R K+ + A L + VG + SS
Sbjct: 441 EDLGLEPNVK---------------SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 383 LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEI 442
+ ++IHA G E A A + M ++GIK ++ YTS++ F + GK MEI
Sbjct: 486 H---SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 443 IEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCK 502
+ M + + +T + L+ G+ I+A +V G P TY+ML+ +
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 503 VGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQK 551
G+ + +L+ +M + P +I + T+ + R RD R K
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR--VRDFKRAFFYHK 649
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 113/258 (43%), Gaps = 3/258 (1%)
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
++ L GR+ R D L + + + D L + L +A + +++ K
Sbjct: 243 VLFTLLGRE-RMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 344 IG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLE 402
I Y ++ +++I L +AG+ + + E + + Q G ++ + +G E
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 403 DALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI 462
+AL M+++GI+ VY +L+ + K + + + EM+ G +P+ T + L+
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 463 RGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR-SEEAMKLIFKMLDCGI 521
Y +P + M+ G P+ ++Y+ L++ + + S+ A +M G+
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 522 VPSTINFRTVFFGLNREG 539
PS+ ++ + + G
Sbjct: 482 KPSSHSYTALIHAYSVSG 499
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 12/282 (4%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
++T ++ YGR G N A F+ +++ G PS TY+ ++ +G K +A +++
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV--EGDKFKEAEEVFE 233
Query: 305 EMINAGHVP---DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCR 361
+++ P D+++ + + G+ +ARK S+ +G VP S +
Sbjct: 234 TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM--VGKGVPQSTVTYNSLMSF 291
Query: 362 AGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
+E + ++ ++S + D V+ +I A R R E+AL+ + M G++ T
Sbjct: 292 ETSYKEVSKIYDQM---QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 348
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
Y L+ F V +A + + M++ P++ + + ++ Y+N A F
Sbjct: 349 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 408
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
R+K+ G P+ TY L+ K E+ M++ KM GI
Sbjct: 409 RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I A + G A + + + G + YT+L+ + + + A I MQ SG
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRM--KLKGPF-PDFETYSMLLTCLCKVGRSE 507
EP+ +T +++ ++ ++ +A VF + + K P PD + Y M++ K G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 508 EAMKLIFKMLDCGIVPSTINFRTV 531
+A K+ M+ G+ ST+ + ++
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSL 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 83/335 (24%)
Query: 224 FKHMR--NLFFE----MRRNNYPVTSE-TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSP 276
FK ++ NL E +R N+ SE + ++I YG++G N A + G +P
Sbjct: 113 FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTP 172
Query: 277 SRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARK 336
+ +Y L+ + GR G K ++A ++ M ++G P
Sbjct: 173 NVISYTALMESY-GRGG-KCNNAEAIFRRMQSSGPEPS---------------------- 208
Query: 337 CTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHA 394
++Y +I++ K +EA + ++ +KS L DQ +I+
Sbjct: 209 ------------AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
+ G E A +M +G+ + Y SL+ K+V K I ++MQ+S +P+
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPD 313
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
VV+ Y++L+ + R EEA+ +
Sbjct: 314 VVS-----------------------------------YALLIKAYGRARREEEALSVFE 338
Query: 515 KMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
+MLD G+ P+ + + G + A+ V +
Sbjct: 339 EMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 163/358 (45%), Gaps = 46/358 (12%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
LF EM + + W ++M+ R G A+ F+E++ G ST L+
Sbjct: 45 LFDEMPKRD----DLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 290 GRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP 349
++G + +++G ++ G + + + + G + +RK +S+K +
Sbjct: 101 NKEG--FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS-- 156
Query: 350 LSYSLIIRALCRAGKVEEALALAGE--VVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
S++ I+ + + G V++A+ L E + G + D VT S++ KG +DA+A
Sbjct: 157 -SWNSILSSYTKLGYVDDAIGLLDEMEICGLKP---DIVTWNSLLSGYASKGLSKDAIAV 212
Query: 408 IDAMKQQGIKLTIHVYTSLI--VHFFKEKQVGKAME-----------------IIEEMQQ 448
+ M+ G+K + +SL+ V ++GKA+ +I+ +
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 449 SGYEP------------NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
+GY P N+V ++L+ G DA + RM+ +G PD T++ L
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK-RDLARVVLQQKSD 553
+ +G+ E+A+ +I KM + G+ P+ +++ +F G ++ G R+ +V ++ + +
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 153/347 (44%), Gaps = 29/347 (8%)
Query: 164 KLEKSAIRFTPEFVVEVLQIC-NKYGHNVLNFFSWVRKQPGY-------KHTAESYNLAI 215
+++ S + +V++LQ+C NK G F+ R+ GY + + +L +
Sbjct: 79 EMQFSGAKAYDSTMVKLLQVCSNKEG------FAEGRQIHGYVLRLGLESNVSMCNSLIV 132
Query: 216 KIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYS 275
+ +GK + R +F M+ N +W ++ Y ++G + A+ E++ G
Sbjct: 133 MYSRNGK-LELSRKVFNSMKDRNL----SSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 276 PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEAR 335
P T+ L+ + K DA+ + M AG P I + L + E G + +
Sbjct: 188 PDIVTWNSLLSGYASKGLSK--DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 336 KCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH 393
+ ++ Y V + +LI + + G + A +V + + V S++
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYI-KTGYLPYA-----RMVFDMMDAKNIVAWNSLVS 299
Query: 394 ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP 453
L L+DA A + M+++GIK + SL + + KA+++I +M++ G P
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 454 NVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCL 500
NVV+ +A+ G +A VF +M+ +G P+ T S LL L
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 18/288 (6%)
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+I++Y R G ++ F +K S S I++ + G VDDA+ + EM
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDRNLSSWNS-----ILSSYTKLGY-VDDAIGLLDEMEI 183
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK--IGYTVPLSYSL--IIRALCRAGK 364
G PD I T+ L S ++ LK+ I P + S+ +++A+ G
Sbjct: 184 CGLKPD---IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 365 VEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYT 424
++ A+ G ++ + D ++I ++ G L A D M + I +
Sbjct: 241 LKLGKAIHGYIL-RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWN 295
Query: 425 SLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLK 484
SL+ + A ++ M++ G +P+ +T ++L GY + +P A +V +MK K
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Query: 485 GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
G P+ +++ + + K G A+K+ KM + G+ P+ T+
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 12/282 (4%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
++T ++ YGR G N A F+ +++ G PS TY+ ++ +G K +A +++
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV--EGDKFKEAEEVFE 240
Query: 305 EMINAGHVP---DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCR 361
+++ P D+++ + + G+ +ARK S+ +G VP S +
Sbjct: 241 TLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM--VGKGVPQSTVTYNSLMSF 298
Query: 362 AGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
+E + ++ ++S + D V+ +I A R R E+AL+ + M G++ T
Sbjct: 299 ETSYKEVSKIYDQM---QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 355
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
Y L+ F V +A + + M++ P++ + + ++ Y+N A F
Sbjct: 356 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 415
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
R+K+ G P+ TY L+ K E+ M++ KM GI
Sbjct: 416 RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I A + G A + + + G + YT+L+ + + + A I MQ SG
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRM--KLKGPF-PDFETYSMLLTCLCKVGRSE 507
EP+ +T +++ ++ ++ +A VF + + K P PD + Y M++ K G E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 508 EAMKLIFKMLDCGIVPSTINFRTV 531
+A K+ M+ G+ ST+ + ++
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSL 295
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 123/319 (38%), Gaps = 77/319 (24%)
Query: 234 MRRNNYPVTSE-TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
+R N+ SE + ++I YG++G N A + G +P+ +Y L+ + GR
Sbjct: 136 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESY-GRG 194
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSY 352
G K ++A ++ M ++G P ++Y
Sbjct: 195 G-KCNNAEAIFRRMQSSGPEPS----------------------------------AITY 219
Query: 353 SLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDA 410
+I++ K +EA + ++ +KS L DQ +I+ + G E A +
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
M +G+ + Y SL+ K+V K I ++MQ+S +P+VV+
Sbjct: 280 MVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVS------------- 323
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
Y++L+ + R EEA+ + +MLD G+ P+ +
Sbjct: 324 ----------------------YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 531 VFFGLNREGKRDLARVVLQ 549
+ G + A+ V +
Sbjct: 362 LLDAFAISGMVEQAKTVFK 380
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN--- 467
M Q+G+ YT+LI F+ A EI +EM G P+++T + L+ G
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 468 VERPI------DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
+E+ + D W++F + LKG P+ TY+ +++ CK G EEA L KM + G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 522 VPSTINFRTVFFGLNREGKR 541
+P + + T+ R+G +
Sbjct: 127 LPDSGTYNTLIRAHLRDGDK 146
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM--- 440
+ VT ++I L + G + A M G+ I Y L+ K ++ KA+
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 441 ------EIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYS 494
++ + G +PNVVT + +I G+ +A+ +F +MK GP PD TY+
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDC 519
L+ + G + +LI +M C
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSC 159
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
ME+ EM Q G N VT + LI+G A +F M G PD TY++LL
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 500 LCKVGRSEEAM---------KLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
LCK G+ E+A+ L + G+ P+ + + T+ G ++G ++ A + ++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 143/319 (44%), Gaps = 36/319 (11%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
W +++ Y + G A+ F +++ G P+R T + A G V++ + +
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG--VEEGKQSHA 298
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSL--KKIGYTVPLSYSLIIRALCRA 362
I G D L + L C+VG + A D + K + ++++LII +
Sbjct: 299 IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV-----VTWNLIISGYVQQ 353
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G VE+A+ + +++ EK D VT +++ A A + + +KL V
Sbjct: 354 GLVEDAIYMC-QLMRLEKLKYDCVTLATLMSA---------------AARTENLKLGKEV 397
Query: 423 YTSLIVHFFKEKQV---------GKAMEIIEEMQ--QSGYEPNVVTCSALIRGYMNVERP 471
I H F+ V K I++ + S E +++ + L+ Y
Sbjct: 398 QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+A +FY M+L+G P+ T+++++ L + G+ +EA + +M GI+P+ I++ T+
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 532 FFGLNREGKRDLARVVLQQ 550
G+ + G + A + L++
Sbjct: 518 MNGMVQNGCSEEAILFLRK 536
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
D T +++ GR++ + MK++G+ + YTSLI V AM +
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKV 503
EEM+ +G EP VV+ +A ++ R +A V+ M P+ TY++L+ L
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 504 GRSEEAMKLIFKMLDCGIVP 523
G+ EEA+ + FKM + G+ P
Sbjct: 241 GKCEEALDIFFKMQEIGVQP 260
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 180/495 (36%), Gaps = 100/495 (20%)
Query: 133 VLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVL 192
LP Y+ V + IL S +W QE+L +R+ + VL+ L
Sbjct: 49 TLPDPSVYTRDIVSNIYNILKYS-NWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWL 107
Query: 193 NFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIML 252
FF+W + G+KH +Y + I + M ++F M+ + + T+T +I
Sbjct: 108 -FFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHW 166
Query: 253 YGRIGLTNMAMNCFKEIKADG-----------------------------------YSPS 277
G + AM ++E++ +G SP+
Sbjct: 167 VSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPN 226
Query: 278 RSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDK----------------ELIETY 321
TY L+ L K ++AL ++ +M G PDK +
Sbjct: 227 CHTYTVLMEYLVATG--KCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRV 284
Query: 322 LGCLCEVGSVLEAR---KCTDSLKKIGYTVPL----SYSLIIRALCRAGKVEEALALAGE 374
L + E G VL + ++LK G + L + + + +LC + E A +
Sbjct: 285 LVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVND 344
Query: 375 VVGAEKS----------------------------SLDQVTCGSIIHALLRKGRLEDALA 406
++ S LD +II + R E A
Sbjct: 345 TKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASL 404
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
D + GI L Y +LI +F + ++ K +E+++EM ++ + + LI
Sbjct: 405 AFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLG 464
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFE----TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
RP A +VF PD + Y+ L+ G E+AMK++ +M + I+
Sbjct: 465 FGRRPRLAADVF------DLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIM 518
Query: 523 PSTINFRTVFFGLNR 537
PS + + GL +
Sbjct: 519 PSLGTYDVLLSGLEK 533
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 158/408 (38%), Gaps = 47/408 (11%)
Query: 158 WS-LIQEKLEKSAIR--FTPEFVVEVLQICNKYGHNV-LNFFSWVRKQPGYKHTAESYNL 213
WS LI++ L R +P V V+ H++ L FF+W +QPGY H + SY+
Sbjct: 28 WSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHS 87
Query: 214 AIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI--MLYGRIGLTNMAMNCFKEIKA 271
K + F M LF +++ N + S + +I ++ GR + A +E +
Sbjct: 88 IFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQS--AFWVLEEAFS 145
Query: 272 DGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV 331
G L+ L D A K++ +M + G + Y+G C
Sbjct: 146 TGQEIHPDVCNRLLAGLTSDGC--YDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSET 203
Query: 332 LEARKCTDSLKKIGYTVPLSY--SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCG 389
+ + D +KK + S LI+ +LC+ + +A + E+ + D +
Sbjct: 204 NQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKP-DFMAYR 262
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE----- 444
I A + G L + + ++ G+ Y + I+ K++ +A E+ E
Sbjct: 263 VIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSG 322
Query: 445 -----------------------------EMQQSGYEPNVVTCSALIRGYMNVERPIDAW 475
M +G P + T S L + ++
Sbjct: 323 KFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLI 382
Query: 476 NVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
+ + KG F + ++YS++++ LCK GR E+ + +M G+ P
Sbjct: 383 KAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAP 430
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 137/298 (45%), Gaps = 16/298 (5%)
Query: 224 FKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
+ +RN+ + Y V +E + + LY R K+ + G +P S Y+
Sbjct: 246 LEELRNIDCKPDFMAYRVIAEAFVVTGNLYER-------QVVLKKKRKLGVAPRSSDYRA 298
Query: 284 LIIALCGRKGRKVDDALKMYGEMINAGHVP-DKELIETYLGCLCEVG--SVLEARKCTDS 340
I+ L K ++ +A K E+I +G P D ++++ +G + V S +E S
Sbjct: 299 FILDLISAK--RLTEA-KEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVS 355
Query: 341 LKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGR 400
K+ LS + + LCR K + L A E++ ++ + + +I L + GR
Sbjct: 356 TGKLPAIRTLSK--LSKNLCRHDKSDH-LIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 401 LEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSA 460
+ ++ + MK++G+ + +Y +LI K + + A ++ +EM G + N+ T +
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
LIR ++ +F +M +G PD Y L+ LCK + E AM++ K ++
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCME 530
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 150/364 (41%), Gaps = 41/364 (11%)
Query: 224 FKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKY 283
+ + + LF +MR + + + + I + R TN + E+K + + S
Sbjct: 168 YDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL 227
Query: 284 LII-ALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK 342
LI+ +LC K + DA + E+ N PD G++ E + +
Sbjct: 228 LILHSLC--KCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKR 285
Query: 343 KIGYTVPLS--YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHA------ 394
K+G P S Y I L A ++ EA +A EV+ + K +D ++I +
Sbjct: 286 KLG-VAPRSSDYRAFILDLISAKRLTEAKEVA-EVIVSGKFPMDNDILDALIGSVSAVDP 343
Query: 395 ----------------------------LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
L R + + + + + +G + Y+ +
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP 486
I K +V ++ ++EM++ G P+V +ALI E A ++ M ++G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARV 546
+ TY++L+ L + G +EE+++L KML+ GI P + ++ GL +E K + A
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 547 VLQQ 550
V ++
Sbjct: 524 VFRK 527
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 183/443 (41%), Gaps = 39/443 (8%)
Query: 17 IFKSMEYQGIKPTWKSYTVFIKELCKASRTEDILKVLDEMQASKIAIRDEVFHWVITYLE 76
+FK ++ I Y I L + + VL+E ++ I +V + ++ L
Sbjct: 104 LFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLT 163
Query: 77 NKG--EFAVKEKVQQMHTASKLAPEKFSESKKQVFVG-----IKVEEDVR-VDQLKSEKV 128
+ G ++A K V+ H L F V++G + + +R VD++K +
Sbjct: 164 SDGCYDYAQKLFVKMRHKGVSLNTLGFG-----VYIGWFCRSSETNQLLRLVDEVKKANL 218
Query: 129 DCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEF-----VVEVLQI 183
+ + + L +H +C+ S MD I E+L I P+F + E +
Sbjct: 219 NINGSIIALLI-----LHSLCKC-SREMDAFYILEELRN--IDCKPDFMAYRVIAEAFVV 270
Query: 184 C-NKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVT 242
N Y V+ +++ G + Y I +S K + + + +P+
Sbjct: 271 TGNLYERQVV---LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMD 327
Query: 243 SETWTIMIMLYGRIGLTN--MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDAL 300
++ I+ L G + + A+ + + G P+ T L LC + K D +
Sbjct: 328 ND---ILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLC--RHDKSDHLI 382
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRAL 359
K Y + + G+ + + + LC+ G V E+ +KK G +S Y+ +I A
Sbjct: 383 KAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEAC 442
Query: 360 CRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
C+A + A L E+ E ++ T +I L +G E++L D M ++GI+
Sbjct: 443 CKAEMIRPAKKLWDEMF-VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Query: 420 IHVYTSLIVHFFKEKQVGKAMEI 442
+Y SLI KE ++ AME+
Sbjct: 502 ETIYMSLIEGLCKETKIEAAMEV 524
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 142/348 (40%), Gaps = 43/348 (12%)
Query: 202 PGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI-MIMLYGRIGLTN 260
P Y +++A+ K F + L +N SE++ + I+LYGR + +
Sbjct: 69 PDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLD 128
Query: 261 MAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA-GHVPDKELIE 319
++ F+ ++ + + L+ A K K +A ++Y EM G PD E
Sbjct: 129 RSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYK--EANRVYLEMPKMYGIEPDLE--- 183
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
+Y+ +IR LC +G + ++ E+ E
Sbjct: 184 -------------------------------TYNRMIRVLCESGSTSSSYSIVAEM---E 209
Query: 380 KSSLDQVTC--GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
+ + G +I ++ + ++ + M + G+ + + Y +I K K+
Sbjct: 210 RKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSA 269
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
+A +I+ + PN VT S LI G+ + E +A N+F M G PD E Y L+
Sbjct: 270 EAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLI 329
Query: 498 TCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
CLCK G E A+ L + ++ VPS + + GL K D A+
Sbjct: 330 HCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAK 377
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 152/369 (41%), Gaps = 41/369 (11%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
+Q G K + +N I + + +M+ T+ T+ +I YG G
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 260 NMAMNCFKEIKADG---YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKE 316
+ + +G P+ T+ L+ A C +K KV++A ++ +M G PD
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK--KVEEAWEVVKKMEECGVRPDTV 224
Query: 317 LIETYLGCLCEVGS-------VLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEAL 369
T C + G V+E + K G T +++ CR G+V + L
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC----GIVVGGYCREGRVRDGL 280
Query: 370 --------------------ALAGEVVGAEKSSLDQVTCGSIIHALLRK----GRLEDAL 405
+ G V ++ +D+VT ++ + + G + +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKV 340
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+ MK+ +K + Y++++ + + KA ++ +EM ++G +P+ S L +GY
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
+ + P A + + ++ P+ ++ +++ C G ++AM++ KM G+ P+
Sbjct: 401 VRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 526 INFRTVFFG 534
F T+ +G
Sbjct: 460 KTFETLMWG 468
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ L E G EA+ +L + G+ L SY+ ++ A+ + ++ EV +
Sbjct: 52 MNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-G 110
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
+ LD + ++I+A G +EDA+ + MK+ G+ T Y +LI + + ++
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 441 EIIEEMQQSG---YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
E+++ M + G PN+ T + L++ + ++ +AW V +M+ G PD TY+ +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 498 TCLCKVGRSEEA-MKLIFKML----------DCGIVPSTINFRTVFFGLNREGK-RDLAR 545
TC + G + A +++ KM+ CGI V G REG+ RD R
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI---------VVGGYCREGRVRDGLR 281
Query: 546 VVLQQK 551
V + K
Sbjct: 282 FVRRMK 287
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 147/359 (40%), Gaps = 33/359 (9%)
Query: 200 KQPGYKHTAESYNLAIK-IAVSGKDFKHMRNLFFEMRRNNYPVTSE--TWTIMIMLYGRI 256
K+ G T +YN IK ++GK + L + N V T+ +++ + +
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 257 GLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC-GRKGRKVDDALKMYGEMINAGHV-PD 314
A K+++ G P TY IA C +KG V ++ +M+ P+
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYN--TIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSY--SLI---IRALCRAGKVEEAL 369
+G C G V + + +K++ L SLI + + R G E L
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTL 319
Query: 370 AL-------AGEVVGAEKSSL-------------DQVTCGSIIHALLRKGRLEDALAKID 409
L E+VG +K + D +T ++++A G +E A
Sbjct: 320 TLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFK 379
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
M + G+K H Y+ L + + K+ KA E++E + PNVV + +I G+ +
Sbjct: 380 EMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNG 438
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
DA VF +M G P+ +T+ L+ +V + +A +++ M CG+ P F
Sbjct: 439 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 38/179 (21%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+++ L+ +GR +A + + G + ++ YT+L+ +KQ G I+ E++QSG
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 451 YE-----------------------------------PNVVTCSALIRGYMNVERPIDAW 475
+ P T + LI+GY +P +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 NVFYRMKLKGPF---PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
+ M +G P+ T+++L+ CK + EEA +++ KM +CG+ P T+ + T+
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 417 KLTIHVYTSLIVHFF----KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
K+ +T+ V F K+ + +A+E+ +++ P+VV +A++ Y N +
Sbjct: 190 KMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAK 249
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS-EEAMKLIFKMLDCGIVPSTINFRTV 531
+ VF RM G P+ TYS+L+ L G++ ++A K + +M+ G+ P+ + V
Sbjct: 250 ETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAV 309
Query: 532 FFGLNREGKRDLARVVLQQ 550
F REGK + AR +LQ+
Sbjct: 310 FEAFVREGKEESARELLQE 328
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+ AL + GR +AL +K + + +T+++ + Q + +++ M SG
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 451 YEPNVVTCSALIRGYM-NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
PN T S LI+G + + DA M G P+ TY+ + + G+ E A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 510 MKLIFKMLDCGIVP 523
+L+ +M G VP
Sbjct: 323 RELLQEMKGKGFVP 336
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 148/340 (43%), Gaps = 16/340 (4%)
Query: 190 NVLNFFSWVRKQPGYKHTAES--YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWT 247
+ L F + ++P + + YN AI + + ++ M+ + + T T++
Sbjct: 194 SALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYS 253
Query: 248 IMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMI 307
+++ ++ R G + +A++ + E+ + S R Y +I+ C K K D ALK++ M+
Sbjct: 254 LLVSIFVRCGRSELALDVYDEMVNNKISL-REDAMYAMISACT-KEEKWDLALKIFQSML 311
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVE 366
G P+ T + L + G V K LK +G+ +++ ++ AL +A + E
Sbjct: 312 KKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYE 371
Query: 367 EALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSL 426
+ L L + L++ + + + + G E A+ + M+ G+ ++ Y +
Sbjct: 372 DVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLV 431
Query: 427 IVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY---RMKL 483
I K ++ A+ + E M Q +PN T +L+R + W + L
Sbjct: 432 ISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCI--------WGSLWDEVEDIL 483
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
K PD Y+ + +C + A +L KM + G+ P
Sbjct: 484 KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEP 523
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL 354
KV AL+++ M G P+ ++L CL G + +A + ++K +YSL
Sbjct: 122 KVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSL 181
Query: 355 IIRALCRAGKVEEALALAGEVVGAEK--SSLDQV-------TCGSI-------------- 391
+++A+ E AL + E+ K S D V CG I
Sbjct: 182 MLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMK 241
Query: 392 --------------IHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
+ +R GR E AL D M I L ++I KE++
Sbjct: 242 GDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWD 301
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLL 497
A++I + M + G +PN+V C+ LI + + V+ +K G PD T++ LL
Sbjct: 302 LALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALL 361
Query: 498 TCLCKVGRSEEAMKLIFKML 517
T L K R E+ ++L F M+
Sbjct: 362 TALYKANRYEDVLQL-FDMI 380
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 45/325 (13%)
Query: 232 FEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI----IA 287
FE R VT T+++M+ + A+ F+E++ + RS + ++ I+
Sbjct: 165 FEFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELERE--PKRRSCFDVVLYNTAIS 222
Query: 288 LCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
LCGR V + +++ M GH+
Sbjct: 223 LCGRIN-NVYETERIWRVMKGDGHIG---------------------------------- 247
Query: 348 VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
++YSL++ R G+ E AL + E+V K SL + ++I A ++ + + AL
Sbjct: 248 TEITYSLLVSIFVRCGRSELALDVYDEMVN-NKISLREDAMYAMISACTKEEKWDLALKI 306
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
+M ++G+K + +LI K +VG ++ ++ G++P+ T +AL+
Sbjct: 307 FQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYK 366
Query: 468 VERPIDAWNVFYRMKLKG--PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
R D +F ++ + ++ + +++C K+G E+A+KL+++M G+ ST
Sbjct: 367 ANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQ-KLGYWEKAVKLLYEMEGSGLTVST 425
Query: 526 INFRTVFFGLNREGKRDLARVVLQQ 550
++ V + K +A +V +
Sbjct: 426 SSYNLVISACEKSRKSKVALLVYEH 450
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 9/325 (2%)
Query: 205 KHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMN 264
K T E+YNL I + L+ EMR + T+T ++ + R GL A
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 265 CFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGC 324
F++++ DG P Y L+ + R G A +++ M + G PD+ +
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESY-SRAGYPYG-AAEIFSLMQHMGCEPDRASYNIMVDA 400
Query: 325 LCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVV--GAEKS 381
G +A + +K++G + S+ L++ A +A V + A+ E+ G E
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP- 459
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
D S+++ R G+ + M+ I Y LI + K + + E
Sbjct: 460 --DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 517
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ E+++ + P+VVT ++ I Y + + VF M G PD T +LL+ C
Sbjct: 518 LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-C 576
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTI 526
E + + + + G+ S++
Sbjct: 577 SSEEQVEQVTSVLRTMHKGVTVSSL 601
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 144/359 (40%), Gaps = 39/359 (10%)
Query: 185 NKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE 244
NK +++ W+ ++ ++ +NL I +K +L+ ++ + Y T +
Sbjct: 154 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 213
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR---STYKYLIIALCGRKGRKVDDALK 301
T+ ++I Y GL A E++ SP + Y I L RKG ++A+
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKG-NTEEAID 272
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCR 361
++ M P E +Y+L+I +
Sbjct: 273 VFQRMKRDRCKPTTE----------------------------------TYNLMINLYGK 298
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
A K + L E+ + + + T ++++A R+G E A + +++ G++ ++
Sbjct: 299 ASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY 357
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
VY +L+ + + A EI MQ G EP+ + + ++ Y DA VF M
Sbjct: 358 VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 417
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
K G P +++ +LL+ K + ++ +M + G+ P T ++ R G+
Sbjct: 418 KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 476
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 18/297 (6%)
Query: 240 PVTSETWTIMIMLYGRIGLT----NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRK 295
P T +W +I + ++ L ++ + C ++ + P + LI A G+K +
Sbjct: 135 PSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAY-GQK-FQ 192
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV-------LEARKCTDSLKKIGYTV 348
+A +Y +++ + +VP ++ + C G + +E + S K IG TV
Sbjct: 193 YKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTV 252
Query: 349 PLSYSLIIRALC-RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
Y+ I L R G EEA+ + + + ++ T +I+ + + +
Sbjct: 253 ---YNAYIEGLMKRKGNTEEAIDVF-QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL 308
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
M+ K I YT+L+ F +E KA EI E++Q+ G EP+V +AL+ Y
Sbjct: 309 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 368
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
P A +F M+ G PD +Y++++ + G +A + +M GI P+
Sbjct: 369 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 148/338 (43%), Gaps = 20/338 (5%)
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM------LYGRIG 257
Y T ++Y L IK + + EM+ N+ V+ +T + + L R G
Sbjct: 208 YVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ--NHHVSPKTIGVTVYNAYIEGLMKRKG 265
Query: 258 LTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKEL 317
T A++ F+ +K D P+ TY L+I L G K K + K+Y EM + P+
Sbjct: 266 NTEEAIDVFQRMKRDRCKPTTETYN-LMINLYG-KASKSYMSWKLYCEMRSHQCKPNICT 323
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAG---KVEEALALAG 373
+ G +A + + L++ G + Y+ ++ + RAG E +L
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM- 382
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
+ +G E D+ + ++ A R G DA A + MK+ GI T+ + L+ + K
Sbjct: 383 QHMGCEP---DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP-FPDFET 492
+ V K I++EM ++G EP+ ++++ Y + + + M+ GP D T
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME-NGPCTADIST 498
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
Y++L+ K G E +L ++ + P + + +
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKS--SLDQVTCGSIIHALL-RKGRLEDALAK 407
+Y+L+I+A C AG +E A + E+ S ++ + I L+ RKG E+A+
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
MK+ K T Y +I + K + + ++ EM+ +PN+ T +AL+ +
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
A +F +++ G PD Y+ L+ + G A ++ M G P +
Sbjct: 334 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 393
Query: 528 FRTVFFGLNREGKRDLARVVLQQ 550
+ + R G A V ++
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEE 416
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 144/344 (41%), Gaps = 41/344 (11%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI-MIMLYGRIGLTNMAMNCFKE 268
+++ A++ K F + NL N + SE + I+LY + + + ++ F++
Sbjct: 82 AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 141
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA-GHVPDKELIETYLGCLCE 327
++ S + + L+ A K K +A ++Y EM G PD E + CE
Sbjct: 142 LEKFEISRTVKSLNALLFACLVAKDYK--EAKRVYIEMPKMYGIEPDLETYNRMIKVFCE 199
Query: 328 VGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV 386
GS + +++ G S+ L+I K +E G+V+
Sbjct: 200 SGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV----GKVLAM-------- 247
Query: 387 TCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEM 446
MK +G+ + + Y I K K+ +A +++ M
Sbjct: 248 ------------------------MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM 283
Query: 447 QQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
+G +PN VT S LI G+ N + +A +F M +G PD E Y L+ LCK G
Sbjct: 284 LSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDF 343
Query: 507 EEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
E A+ L + ++ VPS +++ GL ++ K + A+ ++ Q
Sbjct: 344 ETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQ 387
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 14/356 (3%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
++ G++H SY+ I ++F + + +R N + +I YG+ G
Sbjct: 73 QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSV 132
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGR----KGRKVDDALKMYGEMINAGHVPDK 315
+ A++ F +I + + + LI L K + D K + V
Sbjct: 133 DKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK--DMRLRPNSVSFN 190
Query: 316 ELIETYLG-CLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAG 373
LI+ +L C E A K D + ++ + +Y+ +I LCR + +A +L
Sbjct: 191 ILIKGFLDKCDWEA-----ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
+++ ++ + VT G ++ L KG +A + M+ +G K + Y L+ K
Sbjct: 246 DMI-KKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
++ +A ++ EM++ +P+VV + L+ R +A+ V M++KG P+ TY
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
M++ C++ + + ++ ML P+ F + GL + G D A VL+
Sbjct: 365 RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 14/271 (5%)
Query: 262 AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
A++ F + + G+ +Y LI L K R D A+ ++ +V +E + +
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLA--KSRNFD-AVDQILRLVRYRNVRCRESL--F 119
Query: 322 LGCLCEVGSVLEARKCTDSLKKIG----YTVPLSYSLIIRALCRAGKVEEALALAGEVVG 377
+G + G K D KI S + +I L G++E+A + G
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD---G 176
Query: 378 AEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQ 435
A+ L + V+ +I L K E A D M + ++ ++ Y SLI +
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD 236
Query: 436 VGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSM 495
+GKA ++E+M + PN VT L++G +A + + M+ +G P Y +
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 496 LLTCLCKVGRSEEAMKLIFKMLDCGIVPSTI 526
L++ L K GR +EA L+ +M I P +
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVV 327
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 9/325 (2%)
Query: 205 KHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMN 264
K T E+YNL I + L+ EMR + T+T ++ + R GL A
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 265 CFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGC 324
F++++ DG P Y L+ + R G A +++ M + G PD+ +
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESY-SRAGYPYG-AAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 325 LCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRALCRAGKVEEALALAGEVV--GAEKS 381
G +A + +K++G + S+ L++ A +A V + A+ E+ G E
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP- 437
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
D S+++ R G+ + M+ I Y LI + K + + E
Sbjct: 438 --DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 495
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ E+++ + P+VVT ++ I Y + + VF M G PD T +LL+ C
Sbjct: 496 LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-C 554
Query: 502 KVGRSEEAMKLIFKMLDCGIVPSTI 526
E + + + + G+ S++
Sbjct: 555 SSEEQVEQVTSVLRTMHKGVTVSSL 579
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 144/359 (40%), Gaps = 39/359 (10%)
Query: 185 NKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE 244
NK +++ W+ ++ ++ +NL I +K +L+ ++ + Y T +
Sbjct: 132 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 191
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSR---STYKYLIIALCGRKGRKVDDALK 301
T+ ++I Y GL A E++ SP + Y I L RKG ++A+
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKG-NTEEAID 250
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCR 361
++ M P E +Y+L+I +
Sbjct: 251 VFQRMKRDRCKPTTE----------------------------------TYNLMINLYGK 276
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
A K + L E+ + + + T ++++A R+G E A + +++ G++ ++
Sbjct: 277 ASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY 335
Query: 422 VYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
VY +L+ + + A EI MQ G EP+ + + ++ Y DA VF M
Sbjct: 336 VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 395
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
K G P +++ +LL+ K + ++ +M + G+ P T ++ R G+
Sbjct: 396 KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 454
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 18/297 (6%)
Query: 240 PVTSETWTIMIMLYGRIGLT----NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRK 295
P T +W +I + ++ L ++ + C ++ + P + LI A G+K +
Sbjct: 113 PSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAY-GQK-FQ 170
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSV-------LEARKCTDSLKKIGYTV 348
+A +Y +++ + +VP ++ + C G + +E + S K IG TV
Sbjct: 171 YKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTV 230
Query: 349 PLSYSLIIRALC-RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
Y+ I L R G EEA+ + + + ++ T +I+ + + +
Sbjct: 231 ---YNAYIEGLMKRKGNTEEAIDVF-QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL 286
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
M+ K I YT+L+ F +E KA EI E++Q+ G EP+V +AL+ Y
Sbjct: 287 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 346
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPS 524
P A +F M+ G PD +Y++++ + G +A + +M GI P+
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 151/346 (43%), Gaps = 20/346 (5%)
Query: 204 YKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM------LYGRIG 257
Y T ++Y L IK + + EM+ N+ V+ +T + + L R G
Sbjct: 186 YVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ--NHHVSPKTIGVTVYNAYIEGLMKRKG 243
Query: 258 LTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKEL 317
T A++ F+ +K D P+ TY L+I L G K K + K+Y EM + P+
Sbjct: 244 NTEEAIDVFQRMKRDRCKPTTETYN-LMINLYG-KASKSYMSWKLYCEMRSHQCKPNICT 301
Query: 318 IETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAG---KVEEALALAG 373
+ G +A + + L++ G + Y+ ++ + RAG E +L
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM- 360
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKE 433
+ +G E D+ + ++ A R G DA A + MK+ GI T+ + L+ + K
Sbjct: 361 QHMGCEP---DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 434 KQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGP-FPDFET 492
+ V K I++EM ++G EP+ ++++ Y + + + M+ GP D T
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME-NGPCTADIST 476
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
Y++L+ K G E +L ++ + P + + + +R+
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 522
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 351 SYSLIIRALCRAGKVEEALALAGEVVGAEKS--SLDQVTCGSIIHALL-RKGRLEDALAK 407
+Y+L+I+A C AG +E A + E+ S ++ + I L+ RKG E+A+
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
MK+ K T Y +I + K + + ++ EM+ +PN+ T +AL+ +
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
A +F +++ G PD Y+ L+ + G A ++ M G P +
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 371
Query: 528 FRTVFFGLNREGKRDLARVVLQQ 550
+ + R G A V ++
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEE 394
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 13/293 (4%)
Query: 229 NLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIAL 288
+L+ EM P T+T+++ Y + G A+ F E+K+ G+ P TY +I+L
Sbjct: 279 DLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSS-VISL 337
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
+ G + A+ +Y +M + G VP T L + + +A +++ +
Sbjct: 338 SVKAG-DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMER--NKI 394
Query: 349 PLS---YSLIIRALCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLED 403
P LIIR + G +A ++ E E+ +L D+ T ++ L G +
Sbjct: 395 PADEVIRGLIIRIYGKLGLFHDAQSMFEET---ERLNLLADEKTYLAMSQVHLNSGNVVK 451
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
AL I+ MK + I L+ Y ++ + K + V A E + ++G P+ +C+ ++
Sbjct: 452 ALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLN 510
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
Y + A ++ + D E Y + CK G EA LI KM
Sbjct: 511 LYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKM 563
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Query: 352 YSLIIRALCRAGKVEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKID 409
Y++++R + GK++ A E+ VG E D V CG+++ R GR L
Sbjct: 191 YTIVLRLYGQVGKIKMAEETFLEMLEVGCEP---DAVACGTMLCTYARWGRHSAMLTFYK 247
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
A++++ I L+ VY ++ K+ GK +++ EM + G PN T + ++ Y
Sbjct: 248 AVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQG 307
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFR 529
+A F MK G P+ TYS +++ K G E+A+ L M GIVPS
Sbjct: 308 FKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCA 367
Query: 530 TVF 532
T+
Sbjct: 368 TML 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 139/340 (40%), Gaps = 50/340 (14%)
Query: 190 NVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIM 249
V +FFSW++ Q Y+ + Y + +++ K F EM + M
Sbjct: 170 QVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTM 229
Query: 250 IMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK--GRKVDDALKMYGEMI 307
+ Y R G + + +K ++ S S Y +++ +L + G+ +D ++ EM+
Sbjct: 230 LCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVID----LWLEMV 285
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEE 367
G P++ +Y+L++ + + G EE
Sbjct: 286 EEGVPPNE----------------------------------FTYTLVVSSYAKQGFKEE 311
Query: 368 ALALAGEVVGAEKSSL----DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
AL GE+ SL ++VT S+I ++ G E A+ + M+ QGI + +
Sbjct: 312 ALKAFGEM-----KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTC 366
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+++ ++K + KA+ + +M+++ + V +IR Y + DA ++F +
Sbjct: 367 ATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETER 426
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
D +TY + G +A+ +I +M+ +P
Sbjct: 427 LNLLADEKTYLAMSQVHLNSGNVVKALDVI-EMMKTRDIP 465
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 133/340 (39%), Gaps = 66/340 (19%)
Query: 244 ETWTIMIMLYGRIGLTNMAMNCFKEIK------ADGYSPSRSTYKYLIIAL--CGRKGRK 295
ET +I +YGR + KE K + +P +S + +I A CG
Sbjct: 671 ETIATLIAVYGR-------QHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGW---- 719
Query: 296 VDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDS-LKKIGYTVPLSYSL 354
++DA ++ E G P I + L G EA + + L+K + Y+
Sbjct: 720 LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNT 779
Query: 355 IIRALCRAGKVEEALALAGEVVGAEKSSLDQVTC-----GSIIHALLRKGRLEDALAKID 409
+I+A+ AGK L A E+ E+ V C ++I R +L+ A+
Sbjct: 780 LIKAMLEAGK----LQCASEIY--ERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFS 833
Query: 410 AMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVE 469
++ G+ L +YT++I+H+ K ++ +A+ + EMQ+ G +P + + +++
Sbjct: 834 NARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSR 893
Query: 470 RPIDAWNVFYRMKLKGPFPDFETYSMLL-------------------------------- 497
+ + M+ G D TY L+
Sbjct: 894 LHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFS 953
Query: 498 ---TCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
+ L K G EEA + KM + GI P + RT+ G
Sbjct: 954 SLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMA 262
G + ++YN I + G +F RR+ + + +T MIM YG+ G + A
Sbjct: 804 GVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEA 863
Query: 263 MNCFKEIKADGYSPSRSTYKYLI-IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
++ F E++ G P +Y ++ I R +VD+ L+ M G D T
Sbjct: 864 LSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQ---AMERNGRCTDLSTYLTL 920
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVP---LSYSLIIRALCRAGKVEEA 368
+ E EA K +K+ G +P +S ++ AL +AG +EEA
Sbjct: 921 IQVYAESSQFAEAEKTITLVKEKG--IPLSHSHFSSLLSALVKAGMMEEA 968
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 362 AGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIH 421
A V +AL + + + E + ++ C SI+ L++ G+L+ + D MK+ G+K +
Sbjct: 144 AKNVSKALEIY-QSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVV 202
Query: 422 VYTSLIVHFFKEKQ-VGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
Y +L+ K K KA+E+I E+ +G + + V ++ + R +A N +
Sbjct: 203 TYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQ 262
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
MK++G P+ YS LL G ++A +L+ +M G+VP+ + T+ + G
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 322
Query: 541 RDLARVVLQQ 550
D +R +L +
Sbjct: 323 FDRSRELLSE 332
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 130/319 (40%), Gaps = 38/319 (11%)
Query: 200 KQPGYKHTAESYNLAIKIAVSGKD-FKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGL 258
K+ G K +YN + + K+ + L E+ N + S + ++ + G
Sbjct: 193 KRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGR 252
Query: 259 TNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI 318
+ A N +++K +G+SP+ Y L+ + + K D L EM + G VP+K ++
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADEL--MTEMKSIGLVPNKVMM 310
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGYT-VPLSYSLIIRALCRAGKVEEALALAGEVVG 377
T L + G +R+ L+ GY + Y +++ L +AGK+EEA ++ ++ G
Sbjct: 311 TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG 370
Query: 378 AEKSS----------------------------------LDQVTCGSIIHALLRKGRLED 403
S D V +++ A R G +E
Sbjct: 371 KGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMES 430
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
+ + M +Q + + + LI +F KEK A + +M G+ CS+LI
Sbjct: 431 VMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIY 490
Query: 464 GYMNVERPIDAWNVFYRMK 482
+ +A++V+ ++
Sbjct: 491 HLGKIRAQAEAFSVYNMLR 509
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 144/334 (43%), Gaps = 12/334 (3%)
Query: 191 VLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMI 250
V+ + V + P K + SY LA K A+S + + + ++R + + +++
Sbjct: 49 VIELPANVAEAPRSKRHSNSY-LARKSAIS--EVQRSSDFLSSLQRLATVLKVQDLNVIL 105
Query: 251 MLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG 310
+G G + F+ ++ G S STY I G K V AL++Y + +
Sbjct: 106 RDFGISGRWQDLIQLFEWMQQHG-KISVSTYSS-CIKFVGAKN--VSKALEIYQSIPDES 161
Query: 311 HVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALA 370
+ + + L CL + G + K D +K+ G + + A C KV+
Sbjct: 162 TKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCI--KVKNGYP 219
Query: 371 LAGEVVGAEKSS---LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A E++G + +D V G+++ GR E+A I MK +G I+ Y+SL+
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
+ + KA E++ EM+ G PN V + L++ Y+ + + ++ G
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYA 339
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
+ Y ML+ L K G+ EEA + M G+
Sbjct: 340 ENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 134/320 (41%), Gaps = 50/320 (15%)
Query: 197 WVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTI--MIMLYG 254
W RK Y ++ + K F+ + + E +N YP S+ + +I LYG
Sbjct: 66 WFRKNIAV------YERTVRRLAAAKKFEWVEEILEE--QNKYPNMSKEGFVARIINLYG 117
Query: 255 RIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPD 314
R+G+ A F E+ + ++ L+ A K K D ++ E+ P
Sbjct: 118 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSK--KFDLVEGIFKEL------PG 169
Query: 315 KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGE 374
K IE + SY+ +I+ LC G EA+AL E
Sbjct: 170 KLSIEPDVA---------------------------SYNTLIKGLCGKGSFTEAVALIDE 202
Query: 375 VVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFK 432
+ E L D +T ++H KG+ E+ M ++ +K I Y + ++
Sbjct: 203 I---ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
E + + + + ++++ + +P+V T +A+I+G+++ + +A + ++ G P
Sbjct: 260 ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV 319
Query: 493 YSMLLTCLCKVGRSEEAMKL 512
++ LL +CK G E A +L
Sbjct: 320 FNSLLPAICKAGDLESAYEL 339
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 138/316 (43%), Gaps = 37/316 (11%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK-----GRKVD-DA 299
WT +I Y G + A+ + ++ + +P T+ L+ A CG GR+
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKA-CGTMKDLNLGRQFHAQT 175
Query: 300 LKMYGE-MINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRA 358
++ G + G+ +I+ Y+ C S+ ARK D + + +S++ +I A
Sbjct: 176 FRLRGFCFVYVGNT----MIDMYVKC----ESIDCARKVFDEMPERDV---ISWTELIAA 224
Query: 359 LCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIK- 417
R G +E A L + + D V +++ + + ++AL D M++ GI+
Sbjct: 225 YARVGNMECAAELFESL-----PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 279
Query: 418 --LTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP--NVVTCSALIRGYMNVERPID 473
+T+ Y S K +A++I Q+SGY P +VV SALI Y +
Sbjct: 280 DEVTVAGYISACAQLGASKYADRAVQI---AQKSGYSPSDHVVIGSALIDMYSKCGNVEE 336
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML-DCGIVPSTINFRTVF 532
A NVF M K F TYS ++ L GR++EA+ L M+ I P+T+ F
Sbjct: 337 AVNVFMSMNNKNVF----TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGAL 392
Query: 533 FGLNREGKRDLARVVL 548
+ G D R V
Sbjct: 393 MACSHSGLVDQGRQVF 408
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 57/336 (16%)
Query: 237 NNYPVTSETWTIMIMLYGRIGLTNM--AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
+N P+ T I++ G + N+ AM +++ G+ Y YL++ K
Sbjct: 193 DNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV--KNS 250
Query: 295 KVDDALKMYGEMIN--AGHVPD-----------------KELIETY-------------- 321
D LK+Y E+ G V D KE +E Y
Sbjct: 251 DADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSA 310
Query: 322 ------LGCLCEVGSVLEARKCTDSLKKIGYTVPL-------SYSLIIRALCRAGKVEEA 368
L L E G EA K D++KK + P ++++++ C GK EEA
Sbjct: 311 MAYNYVLEALSENGKFDEALKLFDAVKK-EHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 369 LALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIV 428
+ + ++ G K S D ++ ++++ L L +A M+++ +K + Y L+
Sbjct: 370 MEVFRQM-GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 429 HFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM--KLKGP 486
FKE ++ + + M +S PN+ + L + + DA + F M KLK
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKM- 487
Query: 487 FPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
D E Y ++ L + GR +E +K++ +MLD V
Sbjct: 488 --DDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV 521
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 250 IMLYGRIGLTNMAMNCFKEI----KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGE 305
+L+ +G ++ + C + K Y P Y LI ++ G+KG + A+ ++ E
Sbjct: 101 FLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLI-SVMGKKG-QTRMAMWLFSE 158
Query: 306 MINAGHVPD----KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRAL 359
M N+G PD LI +L + ++ + R D +K I P ++Y++++RA
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 360 CRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
++GKV++ AL ++ S D T ++ A + G +++ A + M+ K
Sbjct: 219 AQSGKVDQVNALFKDL-DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPD 277
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
I + LI + K+++ K + + + +S +P + T +++I Y A VF
Sbjct: 278 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK 337
Query: 480 RMKLKGPFPDFETYSMLL 497
+M P F TY ++
Sbjct: 338 KMNDMNYIPSFITYECMI 355
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 250 IMLYGRIGLTNMAMNCFKEI----KADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGE 305
+L+ +G ++ + C + K Y P Y LI ++ G+KG + A+ ++ E
Sbjct: 101 FLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLI-SVMGKKG-QTRMAMWLFSE 158
Query: 306 MINAGHVPD----KELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVP--LSYSLIIRAL 359
M N+G PD LI +L + ++ + R D +K I P ++Y++++RA
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 360 CRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT 419
++GKV++ AL ++ S D T ++ A + G +++ A + M+ K
Sbjct: 219 AQSGKVDQVNALFKDL-DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPD 277
Query: 420 IHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFY 479
I + LI + K+++ K + + + +S +P + T +++I Y A VF
Sbjct: 278 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK 337
Query: 480 RMKLKGPFPDFETYSMLL 497
+M P F TY ++
Sbjct: 338 KMNDMNYIPSFITYECMI 355
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
MK +G+K + Y SLI + K++++ KA ++I++M++ P+V+T + +I G + +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
P A V MK G +PD Y+ + C R +A KL+ +M+ G+ P+ +
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 531 VF 532
F
Sbjct: 357 FF 358
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 158/398 (39%), Gaps = 49/398 (12%)
Query: 158 WSLIQEKLEKSAIRFTPEFVVEVL----QICNKYGHNVLNFFSWVRKQPGYKHTAESYNL 213
W L+ E K +P + VL ++C+ V +F+ + R P + TA +N
Sbjct: 128 WELLIETKRKDRSLISPRTMQVVLGRVAKLCS-VRQTVESFWKFKRLVPDFFDTA-CFNA 185
Query: 214 AIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADG 273
++ K RN++ ++ P + T I+L G + A F+E+K G
Sbjct: 186 LLRTLCQEKSMTDARNVYHSLKHQFQP---DLQTFNILLSG-WKSSEEAEAFFEEMKGKG 241
Query: 274 YSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLE 333
P TY LI C K R+++ A K+ +M PD T +G L +G +
Sbjct: 242 LKPDVVTYNSLIDVYC--KDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 334 ARKCTDSLKKIG-YTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII 392
AR+ +K+ G Y +Y+ IR C A
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIAR----------------------------- 330
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
RL DA +D M ++G+ Y +G++ E+ M +
Sbjct: 331 -------RLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKL 512
PN +C LI+ + E+ A ++ M +KG +LL LC + + EEA K
Sbjct: 384 PNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKC 443
Query: 513 IFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ +M++ G PS ++F+ + + K D ++Q+
Sbjct: 444 LLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQK 481
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 157/405 (38%), Gaps = 44/405 (10%)
Query: 144 DVHEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGH----NVLNFFSWVR 199
D V R+++ S ++E L S I + + + VL+ ++ H L F+ +
Sbjct: 41 DAETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKRV-RFSHGNPIQTLEFYRYAS 99
Query: 200 KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLT 259
G+ H++ S + + I + F + L E +R + + S M ++ GR+
Sbjct: 100 AIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPR--TMQVVLGRVA-- 155
Query: 260 NMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIE 319
LC R+ ++ + ++ D
Sbjct: 156 ---------------------------KLCS--VRQTVESFWKFKRLV--PDFFDTACFN 184
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAE 379
L LC+ S+ +AR SLK ++++++ K E E + +
Sbjct: 185 ALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW----KSSEEAEAFFEEMKGK 240
Query: 380 KSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKA 439
D VT S+I + +E A ID M+++ + YT++I Q KA
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 440 MEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTC 499
E+++EM++ G P+V +A IR + R DA + M KG P+ TY++
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 500 LCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLA 544
L + +L +ML +P+T + + R K D+A
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMA 405
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 29/295 (9%)
Query: 221 GKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRST 280
G +FK R +F EM+ N TWT +I Y R + + + F ++ +G P+ T
Sbjct: 141 GSNFKDGRKVFDEMKERNVV----TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT 196
Query: 281 YKYLIIALC--GRKGRKVDDALKMYGEMINAG---HVP-DKELIETYLGCLCEVGSVLEA 334
+ + L G GR L+++ ++ G +P LI YL C G+V +A
Sbjct: 197 FAAALGVLAEEGVGGR----GLQVHTVVVKNGLDKTIPVSNSLINLYLKC----GNVRKA 248
Query: 335 RKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIH- 393
R D K ++++ +I G EAL + + L + + S+I
Sbjct: 249 RILFD---KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR-LNYVRLSESSFASVIKL 304
Query: 394 -ALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
A L++ R + L ++ + G ++ T+L+V + K + A+ + +E+ G
Sbjct: 305 CANLKELRFTEQLHC--SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG-- 360
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
NVV+ +A+I G++ + +A ++F MK KG P+ TYS++LT L + SE
Sbjct: 361 -NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE 414
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 50/299 (16%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
+WT MI + + A++ F E+K G P+ TY ++ AL V +++
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL------PVISPSEVHA 417
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGK 364
+++ + + L ++G V EA K I +++S ++ + G+
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV---FSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 365 VEEALALAGE------------------VVGAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
E A+ + GE V A +S+ Q G H K RL+ +L
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ---GKQFHGFAIKSRLDSSLC 531
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
V ++L+ + K+ + A E+ + + E ++V+ +++I GY
Sbjct: 532 ---------------VSSALLTMYAKKGNIESAEEVFKRQR----EKDLVSWNSMISGYA 572
Query: 467 NVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML-DCGIVPS 524
+ + A +VF MK + D T+ + G EE K M+ DC I P+
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 13/160 (8%)
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
++I L +G L A +D + Q+G + +TSL+ + K + +A + E M
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP-- 104
Query: 450 GYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
E N+VTC+A++ GY+ R +AW +F M + +++++LT LC GRSE+A
Sbjct: 105 --ERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-----KNVVSWTVMLTALCDDGRSEDA 157
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
++L +M + +V ++ T+ GL R G + A+ V
Sbjct: 158 VELFDEMPERNVV----SWNTLVTGLIRNGDMEKAKQVFD 193
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 18/277 (6%)
Query: 259 TNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG-HVPDKEL 317
T++ + F I G Y+ L+ ALC +VDDA+++ G+++ G P +
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALC--DAGEVDDAIEILGKILRKGLKAPKRCY 264
Query: 318 IETYLGCLCEVGSVLE--ARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEA--LALAG 373
G +E R T++L + SYS + L GK+ E + LA
Sbjct: 265 HHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKL-TIHVYTSLIVHFFK 432
G E + G+ + AL R G+L++A++ I+ QG L T+ VY LI
Sbjct: 325 RSKGFEPTPF---IYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD 381
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVV----TCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
+ GK+ME + +++ + + V T L+ G + ++A V M +K FP
Sbjct: 382 D---GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
ETY M++ LC + R EA+ + +M+ +VP +
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES 475
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
S+I R GRLEDA++ ++ + + +L+ KE ++ A I +
Sbjct: 85 ASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCY 144
Query: 449 SGYEPN--VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
G+E N + + L++ V R A VF M +G +PD ++Y +L+ C G+
Sbjct: 145 -GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 507 EEAMKLIFKML 517
EEA L++ M
Sbjct: 204 EEATHLLYSMF 214
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 18/277 (6%)
Query: 259 TNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAG-HVPDKEL 317
T++ + F I G Y+ L+ ALC +VDDA+++ G+++ G P +
Sbjct: 207 THLLYSMFWRISQKGSGEDIVVYRILLDALC--DAGEVDDAIEILGKILRKGLKAPKRCY 264
Query: 318 IETYLGCLCEVGSVLE--ARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEA--LALAG 373
G +E R T++L + SYS + L GK+ E + LA
Sbjct: 265 HHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAM 324
Query: 374 EVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKL-TIHVYTSLIVHFFK 432
G E + G+ + AL R G+L++A++ I+ QG L T+ VY LI
Sbjct: 325 RSKGFEPTPF---IYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD 381
Query: 433 EKQVGKAMEIIEEMQQSGYEPNVV----TCSALIRGYMNVERPIDAWNVFYRMKLKGPFP 488
+ GK+ME + +++ + + V T L+ G + ++A V M +K FP
Sbjct: 382 D---GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
ETY M++ LC + R EA+ + +M+ +VP +
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES 475
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 389 GSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ 448
S+I R GRLEDA++ ++ + + +L+ KE ++ A I +
Sbjct: 85 ASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCY 144
Query: 449 SGYEPN--VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRS 506
G+E N + + L++ V R A VF M +G +PD ++Y +L+ C G+
Sbjct: 145 -GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 507 EEAMKLIFKML 517
EEA L++ M
Sbjct: 204 EEATHLLYSMF 214
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 76/245 (31%)
Query: 195 FSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYG 254
F + +QP ++H+ S+ + I G+ F + ++ + R + YP+T E +T +I +Y
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 255 ----------------------------RI--------GLTNMAMNCFKEIKADGYSPSR 278
RI G A FK + G P+
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 279 STYKYLIIALC----------------------------------GRKGRKVDDALKMYG 304
+Y L+ A C RKG +V+ A+++
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG-QVNGAMELLD 249
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYS-LIIRALCRAG 363
+M+N G VPD+ LI G LC+ G E +K + + G++ S S +++ C G
Sbjct: 250 DMLNKGFVPDRTLI----GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFG 305
Query: 364 KVEEA 368
KVEEA
Sbjct: 306 KVEEA 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 438 KAMEIIEEMQQSGYEPNVVTCSALIRGY-MNVERPIDAWNVFYRMKLKGPFPDFETYSML 496
KA E+ + + G PN + + L++ + +N + I A+ +F +M + PD ++Y +L
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI-AYQLFGKMLERDVVPDVDSYKIL 231
Query: 497 LTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
+ C+ G+ AM+L+ ML+ G VP RT+ GL +G D + L++
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEE 281
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 22/216 (10%)
Query: 307 INAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKV 365
I G D IE + L G V K ++ G +P S LII + K
Sbjct: 403 IQPGFTHDAYTIERMMAMLARNGQVELVDKLISKVRIEGIKLPFSTIRLIIDLYGISKKP 462
Query: 366 EEALALAGEVVGAEKSSLDQVTCGSI------------IHALLRKGRLEDALAKIDAMKQ 413
E A+ + E D+ CGSI + L + R +AL ++ M
Sbjct: 463 EAAIKVFNE---------DRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDMML 513
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
G+ I ++ L+ HF + ++ + ++Q G EP+ L++ Y ER +
Sbjct: 514 TGVSPDIQTFSGLMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYCRCERSVL 573
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
A+ VF MK PD ET +L+ L + + +EA
Sbjct: 574 AYRVFQDMKDSNLMPDRETKELLVKSLWREEKRKEA 609
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 115/238 (48%), Gaps = 26/238 (10%)
Query: 312 VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALAL 371
VP E + +G LC+VG + EARK D L + ++++ +I + G + EA L
Sbjct: 46 VPQPEWL---IGELCKVGKIAEARKLFDGLPERDV---VTWTHVITGYIKLGDMREAREL 99
Query: 372 AGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
V S + VT +++ LR +L A + + Q+ + + + ++I +
Sbjct: 100 FDRV----DSRKNVVTWTAMVSGYLRSKQLSIA----EMLFQEMPERNVVSWNTMIDGYA 151
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFE 491
+ ++ KA+E+ +EM E N+V+ +++++ + R +A N+F RM P D
Sbjct: 152 QSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVV 203
Query: 492 TYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQ 549
+++ ++ L K G+ +EA +L DC + I++ + G + + D A + Q
Sbjct: 204 SWTAMVDGLAKNGKVDEARRL----FDCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 39/283 (13%)
Query: 223 DFKHMRNLF--FEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRST 280
D + R LF + R+N TWT M+ Y R ++A F+E+ P R+
Sbjct: 92 DMREARELFDRVDSRKNVV-----TWTAMVSGYLRSKQLSIAEMLFQEM------PERNV 140
Query: 281 YKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI--ETYLGCLCEVGSVLEARKCT 338
+ + + ++D AL+++ EM P++ ++ + + L + G + EA
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEM------PERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 339 DSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRK 398
+ + + +S++ ++ L + GKV+EA L + + ++ ++I +
Sbjct: 195 ERMPRRDV---VSWTAMVDGLAKNGKVDEARRLFDCM-----PERNIISWNAMITGYAQN 246
Query: 399 GRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTC 458
R+++A D + Q + + ++I F + +++ KA + + M E NV++
Sbjct: 247 NRIDEA----DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISW 298
Query: 459 SALIRGYMNVERPIDAWNVFYRMKLKGPF-PDFETY-SMLLTC 499
+ +I GY+ + +A NVF +M G P+ TY S+L C
Sbjct: 299 TTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 130/313 (41%), Gaps = 46/313 (14%)
Query: 249 MIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMIN 308
+IMLYG+ G+T A++ F + G C R + + AL++
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYG---------------CKRSVKSFNAALQVLS---- 152
Query: 309 AGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALCRAGKVEE 367
PD I +L D+ K G + +S+++ I++ C G ++
Sbjct: 153 --FNPDLHTIWEFL---------------HDAPSKYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 368 ALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTS 425
A E+ EKS L D VT ++I AL + R + M +G K + +
Sbjct: 196 AYMAMREM---EKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNV 252
Query: 426 LIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKG 485
I ++ A +++ M + EP+ +T + +I+G+ P A V+ M KG
Sbjct: 253 RIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKG 312
Query: 486 PFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLAR 545
P+ + Y ++ LCK G + A + + P+ + GL ++G+ D A+
Sbjct: 313 YKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAK 372
Query: 546 VVLQQKSDLIRRR 558
+++ L+ RR
Sbjct: 373 SIME----LVHRR 381
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 133/328 (40%), Gaps = 50/328 (15%)
Query: 222 KDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTY 281
KD ++ R F M + +W M+ Y + G T A+ F ++ G P+ +T+
Sbjct: 212 KDLENARKYFDRMPEK----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 282 KYLIIALCGR---------------------------------KGRKVDDALKMYGEM-I 307
+I A R K R + A +++ E+
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 308 NAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEE 367
V +I Y +G + AR+ D++ K +S++ +I G+
Sbjct: 328 QRNLVTWNAMISGY----TRIGDMSSARQLFDTMPKRNV---VSWNSLIAGYAHNGQAAL 380
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
A+ +++ S D+VT S++ A LE +D +++ IKL Y SLI
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
+ + + +A + +EM+ E +VV+ + L + ++ N+ +MK +G
Sbjct: 441 FMYARGGNLWEAKRVFDEMK----ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFK 515
PD TY+ +LT + G +E + IFK
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQR-IFK 523
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 20/299 (6%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYS--PSRSTYKYLIIALCGRKGRKVDDALKMY 303
W +I + R MA++ F ++ S P R TY + A GR G + D +++
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY-GRLG-QARDGRQLH 149
Query: 304 GEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAG 363
G +I G D + T L G ++EA + L IG+ V ++++ +I + G
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF--LGMIGFDV-VAWNSMIMGFAKCG 206
Query: 364 KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVY 423
+++A L E+ + V+ S+I +R GR +DAL M+++ +K
Sbjct: 207 LIDQAQNLFDEM-----PQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 424 TSLI--VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM 481
SL+ + + G+ I E + ++ +E N + +ALI Y + NVF
Sbjct: 262 VSLLNACAYLGASEQGRW--IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE-- 317
Query: 482 KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGK 540
P ++ ++ L G E AM L ++ G+ P +++F V G+
Sbjct: 318 --CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 142/359 (39%), Gaps = 100/359 (27%)
Query: 192 LNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIM 251
L+ F W +Q GYKH E+Y+ IK A++GK RNN+ T
Sbjct: 92 LDIFRWTAQQRGYKHNHEAYHTMIKQAITGK-------------RNNFVET--------- 129
Query: 252 LYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGH 311
+E+ A S Y +I CGRK + A +Y +M+ +
Sbjct: 130 -------------LIEEVIAGACEMSVPLYNCIIRFCCGRKFL-FNRAFDVYNKMLRSDD 175
Query: 312 V-PDKELIETYLG--------------CLCEVGSVLEARKCTDSLKKIGYTVPLSY--SL 354
PD +ETY C + +V R T +K G +P ++ ++
Sbjct: 176 SKPD---LETYTLLLSSLLKRFNKLNVCYVYLHAV---RSLTKQMKSNG-VIPDTFVLNM 228
Query: 355 IIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
II+A + +V+EA+ + E+ G+E ++ T ++ + KGR+ L M+
Sbjct: 229 IIKAYAKCLEVDEAIRVFKEMALYGSEPNAY---TYSYLVKGVCEKGRVGQGLGFYKEMQ 285
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
+G+ Y LI E+++ +A+E++ +M +
Sbjct: 286 VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS-------------------- 325
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
PD TY+ +LT LC+ GR EA++++ + V N+RT+
Sbjct: 326 ---------------PDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTL 369
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
MK G+ V +I + K +V +A+ + +EM G EPN T S L++G R
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRT 530
+ M++KG P+ Y +L+ L R +EA+++++ ML + P + + T
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 531 VFFGLNREGK 540
V L R G+
Sbjct: 334 VLTELCRGGR 343
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 45/319 (14%)
Query: 231 FFEMRRNNYPVTSE--TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYL--II 286
FF+ R N + +++++ + GR + A + KE+ G+ + +Y+ +I
Sbjct: 160 FFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELC--GFHEFQKSYQVFNTVI 217
Query: 287 ALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGY 346
C +KG V A K + M+ G P+ I +G + +V EA ++K G
Sbjct: 218 YACTKKG-NVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 347 TVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLED-AL 405
+YS +I R RL D A
Sbjct: 277 VCESAYSSMITIYTRL-------------------------------------RLYDKAE 299
Query: 406 AKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
ID MKQ ++L + + ++ + ++ ++ A I+ M+ +G+ PN++ + LI GY
Sbjct: 300 EVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGY 359
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
+ + A +F+R+ G PD +Y ++ + EEA ++ CG P++
Sbjct: 360 GKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNS 419
Query: 526 INFRTVFFGLNREGKRDLA 544
N T+ + G RD A
Sbjct: 420 FNLFTLINLQAKYGDRDGA 438
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 139/336 (41%), Gaps = 41/336 (12%)
Query: 234 MRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKG 293
M+++ + E W +M+ Y + G +A + ++A G+SP+ Y LI K
Sbjct: 305 MKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG--KI 362
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYS 353
K++ A ++ + N G PD+ + + + EA+ LK+ GY P S++
Sbjct: 363 FKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYK-PNSFN 421
Query: 354 L--IIRALCRAGKVEEALALAGEV--VGAEKSS--------------------------- 382
L +I + G + A+ ++ +G + SS
Sbjct: 422 LFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFH 481
Query: 383 ----LDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
L+Q + S++ A ++ G ++D L + K + H+Y LI + Q+
Sbjct: 482 NHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTD 541
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A++I +S E N+ S +I Y + +A ++ +K G D +S+++
Sbjct: 542 AVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVR 601
Query: 499 CLCKVGRSEEAMKLIFKMLD--CGIVPSTINFRTVF 532
K G EEA + +++D IVP FR +
Sbjct: 602 MYVKAGSLEEACS-VLEIMDEQKDIVPDVYLFRDML 636
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 297 DDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLI 355
D +Y + +G ++E+ + C + E + + + G+T ++++++
Sbjct: 646 DKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVL 705
Query: 356 IRALCRAG---KVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMK 412
+ +A KV E LA +D ++ +II A + + + I M+
Sbjct: 706 LDVYGKAKLFKKVNELFLLA-----KRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 760
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPI 472
G +++ Y +L+ + K+KQ+ K I++ M++S P+ T + +I Y
Sbjct: 761 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 820
Query: 473 DAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
+ +V +K G PD +Y+ L+ G EEA+ L+ +M I+P + + +
Sbjct: 821 EVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLV 880
Query: 533 FGLNR 537
L R
Sbjct: 881 TALRR 885
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 177 VVEVLQICNKYGHN--VLNFFSWVRKQ--PGYKHTAESYNLAIKIAVSGKDFKHMRNLFF 232
V+ I YG N N S ++ G+ + E+YN + K + R++
Sbjct: 733 VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK 792
Query: 233 EMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRK 292
M+++ T+ IMI +YG G + + KE+K G P +Y LI A
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG--I 850
Query: 293 GRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
G V++A+ + EM +PDK + L LEA K + +K++G
Sbjct: 851 GGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 14/338 (4%)
Query: 195 FSWVRKQ-PGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSE-TWTIMIML 252
F W Q G+KH ++ + + + K + L EM R+ + +E + +I
Sbjct: 133 FRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDLIGK 192
Query: 253 YGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINA--- 309
Y + A+ F ++ G P S Y+ LI L + + + A ++ + +
Sbjct: 193 YVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLV--RVHRTESAYRICLDWVETRAE 250
Query: 310 -GHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLS-YSLIIRALCRAGKVEE 367
H+ + + I + LC V EAR L +G + S YS I E+
Sbjct: 251 LNHM-NIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFED 309
Query: 368 ALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLI 427
L+ GEV K D I+H+L R+ E A ++ ++ G K + LI
Sbjct: 310 LLSFIGEV----KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILI 365
Query: 428 VHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF 487
E + +A+ + E+ GY+P+V + +A++ G + MK G
Sbjct: 366 GWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMM 425
Query: 488 PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
T+ +++T CK + EEA +++ KM G++ ++
Sbjct: 426 LSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEAS 463
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 9/256 (3%)
Query: 268 EIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCE 327
E++ G P +T+ +L+ +L+ MI+ G P+ + LC+
Sbjct: 934 EMQGRGVLPDETTFNFLVHGY--SSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCD 991
Query: 328 VGSVLEARKCTDSLKKIGYTVPLSY--SLIIRALCRAGKVEEALALAGEVVGAEKSSLDQ 385
G V +A ++ G+ + S + I+ L G++ +A V ++ +
Sbjct: 992 NGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVT---RNGMMA 1048
Query: 386 VTCGSIIHALLRKGRLEDALAKIDAM-KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIE 444
+II L +G L+ A+ ++ M K Q I + Y S+I + Q+ KAM+
Sbjct: 1049 PNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGS-SSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 445 EMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
EM + G P++ T S L+ + + +++ + M G P E + ++
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEK 1167
Query: 505 RSEEAMKLIFKMLDCG 520
+ +A +++ M CG
Sbjct: 1168 NTVKASEMMEMMQKCG 1183
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 134/322 (41%), Gaps = 41/322 (12%)
Query: 231 FFEMRRNNYPVTSET-WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALC 289
E +N+ + E ++ +I YG+ + N AM F+++ D Y RS + +
Sbjct: 89 LIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQM--DQYGTPRSAVSFNALLNA 146
Query: 290 GRKGRKVDDALKMYGEMINAGH--VPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYT 347
+ D +++ E+ + +PDK
Sbjct: 147 CLHSKNFDKVPQLFDEIPQRYNKIIPDK-------------------------------- 174
Query: 348 VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAK 407
+SY ++I++ C +G E+A+ + ++ G + + + +I+ +L +KG LE A
Sbjct: 175 --ISYGILIKSYCDSGTPEKAIEIMRQMQG-KGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 408 IDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMN 467
+ M ++G +L Y I+ KE + E+IEEM G +P+ ++ + L+ Y
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 468 VERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTIN 527
+A V+ ++ P+ T+ L+ LC E+ + K + +P
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNT 350
Query: 528 FRTVFFGLNREGKRDLARVVLQ 549
+ + GL KRD A+ +++
Sbjct: 351 LKHLVVGLVENKKRDDAKGLIR 372
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 131/292 (44%), Gaps = 33/292 (11%)
Query: 216 KIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKE-IKADGY 274
+A++ F H++N R+ Y W +MI YGR G ++ + CF + + G
Sbjct: 101 NVALARHTFDHIQN------RDVY-----AWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 149
Query: 275 SPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEA 334
+P T+ ++ A R V D K++ + G + D + + + +V A
Sbjct: 150 TPDYRTFPSVLKAC-----RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 335 RKCTDSL--KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSII 392
R D + + +G S++ +I C++G +EAL L+ + ++D VT S++
Sbjct: 205 RILFDEMPVRDMG-----SWNAMISGYCQSGNAKEALTLSNGL-----RAMDSVTVVSLL 254
Query: 393 HALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYE 452
A G + + G++ + V LI + + ++ ++ + M Y
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM----YV 310
Query: 453 PNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
++++ +++I+ Y E+P+ A ++F M+L PD T L + L ++G
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%)
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
AL ++ MK+ GI ++ YT+LI + ++ KA E+ EM G PNV T +++IR
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
G +A + M+ +G P+F YS L+ L K G+ EA K+I +M+ G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 439 AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLT 498
A+ + M++ G +P+V+ + LI GY+ A +F M +KG P+ TY+ ++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 499 CLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQ 550
LC G EA L+ +M G P+ + + T+ L + GK AR V+++
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 34/312 (10%)
Query: 272 DGYSPSRSTYKYLIIALCG-RKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGS 330
D ++ S+ T K + + + A++ + M H P E + L LC G
Sbjct: 180 DMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGH 239
Query: 331 VLEARKCTDSLKKIGYTVPLSYSLIIRALCRA-GKVEEALALAGEVVGAEKSSLDQVTCG 389
+ +A + + KK+ +++I+ C V EA + E+ G + ++ +
Sbjct: 240 IEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREM-GNYCITPNKDSYS 298
Query: 390 SIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQS 449
+I + G L D+L D MK++G+ I VY SL+ +E +AM++++++ +
Sbjct: 299 HMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE 358
Query: 450 GYEPNVVTCSALIR-----GYMNVER-------------PIDAWNVFY------------ 479
G +P+ VT +++IR G ++V R +D ++ F
Sbjct: 359 GLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVL 418
Query: 480 -RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNRE 538
+MK+ P ET+ ++L L K + E A+K+ +M IV + + GL
Sbjct: 419 GQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSC 478
Query: 539 GKRDLARVVLQQ 550
G + AR + +
Sbjct: 479 GWLEKAREIYSE 490
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 239 YPVTSETWTIMIMLYGRIGL-TNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVD 297
+PV E + +++ + I A ++E+ +P++ +Y ++I C K +
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMIS--CFSKVGNLF 311
Query: 298 DALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLII 356
D+L++Y EM G P E+ + + L EA K L + G ++Y+ +I
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 357 RALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
R LC AGK++ A + ++ S HA L E L + MK +
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSP-----TVDTFHAFLEAVNFEKTLEVLGQMKISDL 426
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWN 476
T + ++ FK KQ A++I EM + N A I+G ++ A
Sbjct: 427 GPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKARE 486
Query: 477 VFYRMKLKG 485
++ MK KG
Sbjct: 487 IYSEMKSKG 495
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 25/306 (8%)
Query: 243 SETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKM 302
S +W MI + GL A+ CF+E+K G + + ++ A CG G +++ ++
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA-CGGLG-AINEGKQI 292
Query: 303 YGEMINAG---HV-PDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRA 358
+ +I H+ LI+ Y C C + A+ D +K+ +S++ ++
Sbjct: 293 HACIIRTNFQDHIYVGSALIDMYCKCKC----LHYAKTVFDRMKQKNV---VSWTAMVVG 345
Query: 359 LCRAGKVEEALALAGEVVGAEKSSL--DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGI 416
+ G+ EEA+ + + ++S + D T G I A LE+ G+
Sbjct: 346 YGQTGRAEEAVKI---FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
Query: 417 KLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWN 476
+ V SL+ + K + + + EM + V+ +A++ Y R ++
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQ 458
Query: 477 VFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML--DCGIVPSTINFRTVFFG 534
+F +M G PD T + +++ + G E+ + FK++ + GIVPS ++ +
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY-FKLMTSEYGIVPSIGHYSCMIDL 517
Query: 535 LNREGK 540
+R G+
Sbjct: 518 FSRSGR 523
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 125/317 (39%), Gaps = 57/317 (17%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
TW ++I Y GL A+ + + D +S + + + + V +++G
Sbjct: 105 TWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTRVTLMTMLKLSSSNGHVSLGKQIHG 163
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV----PLSYSLIIRALC 360
++I G E+YL + + C KK+ Y + + Y+ ++ L
Sbjct: 164 QVIKLG-------FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLT- 419
G +E+AL L G EK D V+ ++I L + G ++A+ MK QG+K+
Sbjct: 217 ACGMIEDALQL---FRGMEK---DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 420 ----------------------------------IHVYTSLIVHFFKEKQVGKAMEIIEE 445
I+V ++LI + K K + A + +
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M+Q NVV+ +A++ GY R +A +F M+ G PD T ++ V
Sbjct: 331 MKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 506 SEEAMKLIFKMLDCGIV 522
EE + K + G++
Sbjct: 387 LEEGSQFHGKAITSGLI 403
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAM 411
+++++RA C +++EA ++ ++ + + D T ++ G + M
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKL--HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEM 236
Query: 412 KQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERP 471
++G K Y I F K++ G+A+ + E+M + ++ V + LI G
Sbjct: 237 VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
I A +F + +G PD Y+ L++ L K G A+K++ +M + GI P ++ F ++
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 532 FFGL 535
F G+
Sbjct: 357 FIGM 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 156/361 (43%), Gaps = 15/361 (4%)
Query: 173 TPEFVVEVLQ---ICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRN 229
+PEFV EVL + G L FF + K T++S+ + I + F
Sbjct: 65 SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWA 124
Query: 230 LFFEMRRNNYP--VTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRST--YKYLI 285
L E+R++ YP ++ ++ +I++ + G + F +++ + + + L+
Sbjct: 125 LMAEVRKD-YPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILL 183
Query: 286 IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIG 345
A C R++ +A ++ E +++ PD + + L E G V + K G
Sbjct: 184 RAFCTE--REMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRG 240
Query: 346 YTV-PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
+ ++Y + I C+ EAL L ++ + Q+ I + + + +++ A
Sbjct: 241 FKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIK-A 299
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
D + ++G+ Y +L+ K V A+++++EM++ G EP+ VT ++ G
Sbjct: 300 RQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 465 YM-NVERPIDAWNVFY-RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIV 522
M + E + +Y +MK + P T ML+ C G + L ML+ G
Sbjct: 360 MMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYC 419
Query: 523 P 523
P
Sbjct: 420 P 420
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 156 MDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAI 215
++ S QE + K RFTPE + + + + + + F+W +QP + H SY++AI
Sbjct: 89 LNESKFQETISKLPPRFTPEELADAITL-EEDPFLCFHLFNWASQQPRFTHENCSYHIAI 147
Query: 216 KIAVSGKDFKHMR--NLFFEM-RRNNYPVTSETWTIMIMLYGRIGLTNMAM--------- 263
+ + K K +R N+F M N T I+ +G N +
Sbjct: 148 RKLGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETV 207
Query: 264 -NCFKEIKADGYSPSRSTYKYLIIAL-CGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
+ F+++ G P + AL C KGR + + ++ EM G VP+ + +
Sbjct: 208 RSLFRQMVDSGIEPD-------VFALNCLVKGRTI-NTRELLSEMKGKGFVPNGKSYNSL 259
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALAL 371
+ G + +A KC + + G V +SY ++ CR GK +EA L
Sbjct: 260 VNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRL 310
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
S I H + E + +M SG EP+V + L++G R I+ + MK
Sbjct: 196 NSFINHLYMET----VRSLFRQMVDSGIEPDVFALNCLVKG-----RTINTRELLSEMKG 246
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
KG P+ ++Y+ L+ G ++A+K +++M++ G V I++RT+ R+GK D
Sbjct: 247 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 306
Query: 544 ARVVLQ 549
A +L+
Sbjct: 307 ATRLLE 312
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 145/353 (41%), Gaps = 50/353 (14%)
Query: 212 NLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKA 271
N+ I + V LF +M + N +WT MI Y + + A+ +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 272 DGYSPSRSTYKYLI----------IALCG--RKGRKVD------------------DALK 301
D P+ TY ++ + CG ++G + D DAL
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 302 MYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV-PLSYSLIIRALC 360
++ EM+ D + + +G + A + +K+ G+ + + ++RA
Sbjct: 216 VFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
+E + +V K D + +++ + G LEDAL + MK++ +
Sbjct: 272 GLALLELGMQAHVHIV---KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI--- 325
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
++++I + +A+++ E M+ SG +PN +T ++ + D W F
Sbjct: 326 -TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 481 M-KLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVF 532
M KL G P E Y ++ L K G+ ++A+KL+ +M +C P + +RT+
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM-ECE--PDAVTWRTLL 434
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 141/347 (40%), Gaps = 39/347 (11%)
Query: 203 GYKHTAESYNLAIKIAVSGKDFKH----MRNLFFEMRRNNYPVTSETWTIMIMLYGRIGL 258
G + +Y+ IK +S + R+L+F R + + ++I +Y + L
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN----VLINMYVKFNL 111
Query: 259 TNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELI 318
N A F ++ P R+ + + K + AL++ M+ P+ +
Sbjct: 112 LNDAHQLFDQM------PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN---V 162
Query: 319 ETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSY-SLIIRALCRAGKVEEALALAGEVVG 377
TY L + + R + K G + S +I + G+ E+AL++ E+V
Sbjct: 163 YTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 378 AEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
D + SII + R + AL MK+ G TS++ +
Sbjct: 223 G-----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL-------RAC 270
Query: 438 KAMEIIEEMQQSG-----YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFET 492
+ ++E Q+ Y+ +++ +AL+ Y DA VF +MK + D T
Sbjct: 271 TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVIT 326
Query: 493 YSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREG 539
+S +++ L + G S+EA+KL +M G P+ I V F + G
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 156 MDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAI 215
++ S QE + K RFTPE + + + + + + F+W +QP + H SY++AI
Sbjct: 114 LNESKFQETISKLPPRFTPEELADAITL-EEDPFLCFHLFNWASQQPRFTHENCSYHIAI 172
Query: 216 KIAVSGKDFKHMR--NLFFEM-RRNNYPVTSETWTIMIMLYGRIGLTNMAM--------- 263
+ + K K +R N+F M N T I+ +G N +
Sbjct: 173 RKLGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETV 232
Query: 264 -NCFKEIKADGYSPSRSTYKYLIIAL-CGRKGRKVDDALKMYGEMINAGHVPDKELIETY 321
+ F+++ G P + AL C KGR + + ++ EM G VP+ + +
Sbjct: 233 RSLFRQMVDSGIEPD-------VFALNCLVKGRTI-NTRELLSEMKGKGFVPNGKSYNSL 284
Query: 322 LGCLCEVGSVLEARKCTDSLKKIGYTVP-LSYSLIIRALCRAGKVEEALAL 371
+ G + +A KC + + G V +SY ++ CR GK +EA L
Sbjct: 285 VNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRL 335
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
S I H + E + +M SG EP+V + L++G R I+ + MK
Sbjct: 221 NSFINHLYMET----VRSLFRQMVDSGIEPDVFALNCLVKG-----RTINTRELLSEMKG 271
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDL 543
KG P+ ++Y+ L+ G ++A+K +++M++ G V I++RT+ R+GK D
Sbjct: 272 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 331
Query: 544 ARVVLQ 549
A +L+
Sbjct: 332 ATRLLE 337
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 136/310 (43%), Gaps = 25/310 (8%)
Query: 156 MDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAI 215
++ S E + K RFTPE + + + + + + F+W +QP + H SY++AI
Sbjct: 121 LNVSKFHETISKLPPRFTPEELADAITL-EEDPFLCFHLFNWASQQPRFTHENCSYHIAI 179
Query: 216 KIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI---KAD 272
+ + K ++ M ++ ++ + + +I + + G A+N F+ + K
Sbjct: 180 RKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNL 239
Query: 273 GYSPSRSTYKYLIIALCGRKGRK------VDDALKMYGEMINAGHVPDKELIETYLGCLC 326
P+ TY L AL GR ++ ++ +M+++G PD L CL
Sbjct: 240 ECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDV----FALNCLV 295
Query: 327 EVGSVLEARKCTDSLK-----KIGYTV---PLSYSLIIRALCRAGKVEEALALAGEVVGA 378
+ G VL D+L+ + Y +Y +I LC G+ A L E+ G
Sbjct: 296 K-GYVLSL-HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKG- 352
Query: 379 EKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGK 438
+ + + S+++A G ++DA+ + M + G + Y +L+ ++ + +
Sbjct: 353 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 412
Query: 439 AMEIIEEMQQ 448
A ++E +++
Sbjct: 413 ATRLLEMLRE 422
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 352 YSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQV--TCGSIIHALLRKGR--------L 401
Y+ II +AGK+ A+ + +V ++ T + ALL +G +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQ-SGYEPNVVTCSA 460
E + M GI+ + L+ + V A+ I +M EPN T
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 461 LIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCG 520
LI G R I+A + MK KG P+ ++Y+ L+ G ++A+K +++M++ G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 521 IVPSTINFRTVFFGLNREGKRDLARVVLQ 549
V I++RT+ R+GK D A +L+
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLE 418
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 141/326 (43%), Gaps = 39/326 (11%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
+W MI + + G + A+ FK+++++ S T ++ A + + + Y
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 305 E--MINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK----------IGYTVP--- 349
E +N +++ Y C GS+ +A++ D++++ GY +
Sbjct: 259 EENRVNVNLTLANAMLDMYTKC----GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 350 ---------------LSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHA 394
++++ +I A + GK EAL + E+ + L+Q+T S + A
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 395 LLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPN 454
+ G LE +K+ GI++ HV ++LI + K + K+ E+ +++ +
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR----D 430
Query: 455 VVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIF 514
V SA+I G +A ++FY+M+ P+ T++ + G +EA L
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 515 KM-LDCGIVPSTINFRTVFFGLNREG 539
+M + GIVP ++ + L R G
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSG 516
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 19/229 (8%)
Query: 230 LFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI-IAL 288
+F MR +N + + + I+I + G + A N F + G P TY +I +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 289 CGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTV 348
GR A K+Y EMI G VPD + + LC+ + +ARK + S
Sbjct: 61 LGR-------AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS------ 107
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKI 408
+++ +I C+A +V++ + L E+ + +T ++IH + G AL
Sbjct: 108 --TFNTLINGYCKATRVKDGMNLFCEMY-RRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Query: 409 DAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVT 457
M G+ + + ++ K++ KA+ ++ +Q+S N VT
Sbjct: 165 QEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 380 KSSLDQVTCGS--IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVG 437
+S++D T G IIH L + G+ ++A + G++ + Y +I + +G
Sbjct: 7 ESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLG 62
Query: 438 KAMEIIEEMQQSGYEPNVVT-----------------------CSA---LIRGYMNVERP 471
+A ++ EM + G P+ +T CS LI GY R
Sbjct: 63 RAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRV 122
Query: 472 IDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTV 531
D N+F M +G + TY+ L+ +VG A+ + +M+ G+ S+I FR +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 532 FFGLNREGKRDLARVVLQQKSDLI 555
L + A +L QKS ++
Sbjct: 183 LPQLCSRKELRKAVAMLLQKSSMV 206
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 446 MQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGR 505
M++S + + + +I G + +A N+F + + G PD +TY+M++ +GR
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR 63
Query: 506 SEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVV 547
+E KL +M+ G+VP TI + ++ GL ++ K AR V
Sbjct: 64 AE---KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV 102
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 16/298 (5%)
Query: 223 DFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYK 282
D +N+F ++ + WT MI+ Y + G A+N F+ + G P ++Y
Sbjct: 362 DMNQAKNIFVSLKDRDVV----AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP--NSYT 415
Query: 283 YLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLK 342
+ + +++G + +G + + + + G++ A + D ++
Sbjct: 416 LAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR 475
Query: 343 KIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLE 402
TV S++ +I AL + G EEAL L E + E D +T + A G +
Sbjct: 476 CERDTV--SWTSMIIALAQHGHAEEALELF-ETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 403 DALAKIDAMKQ-QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
D MK I T+ Y ++ F + + +A E IE+M EP+VVT +L
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP---IEPDVVTWGSL 589
Query: 462 IRGYMNVERPIDAWNVFY-RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLD 518
+ V + ID V R+ L P + YS L G+ EEA K+ M D
Sbjct: 590 LSA-CRVHKNIDLGKVAAERLLLLEP-ENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 171/431 (39%), Gaps = 45/431 (10%)
Query: 118 VRVDQLKSEKVDCSLVLPHLKTYSERDVHEVCRILSSSMDWSLIQEKLEKSA-IRFTPEF 176
+V ++EK++ L+ + ++ E+ RIL + I+ K + P+
Sbjct: 54 TKVPNERTEKMNSGLISTRHQVDPKK---ELSRILRTDAAVKGIERKANSEKYLTLWPKA 110
Query: 177 VVEVLQ--ICNKYGHNVLNFFSWVRKQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEM 234
V+E L I + L F+ +RKQ Y+ ++Y K+ + K LF M
Sbjct: 111 VLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVM 170
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKA-DGYSPSRSTYKYLIIALCGRKG 293
T + +T +I +YG+ L + A + + +K+ P T+ LI + C + G
Sbjct: 171 LSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLI-SCCCKLG 229
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYS 353
R D + EM +YLG C ++Y+
Sbjct: 230 R-FDLVKSIVLEM-------------SYLGVGCST---------------------VTYN 254
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
II +AG EE ++ +++ S D T SII + + + +
Sbjct: 255 TIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQL 314
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
G++ I + LI+ F K K +++ M++ + VT + +I + R
Sbjct: 315 MGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEK 374
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFF 533
+VF +MK +G P+ TY L+ K G + ++ ++++ +V T F +
Sbjct: 375 MDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIIN 434
Query: 534 GLNREGKRDLA 544
+ G DLA
Sbjct: 435 AYGQAG--DLA 443
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 345 GYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
G++ +Y ++I LC+ G++++AL + G++ + L T I+ +L RK ++E+A
Sbjct: 103 GFSRKNAYDILISRLCKLGRIDDALIVIGDMSNG-RLGLTPSTYHPILCSLTRKYKIEEA 161
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
+++M+ + + + + Y + + ++ A E++ ++++ G P+ + AL+ G
Sbjct: 162 WRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLG 221
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVG 504
+ A + RM+ G + T++ ++T L + G
Sbjct: 222 ACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGG 261
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%)
Query: 391 IIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+I L + GR++DAL I M + LT Y ++ ++ ++ +A ++E M+
Sbjct: 113 LISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKS 172
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAM 510
+V + + + A V +++ G PD +Y L+ C+ G+ E AM
Sbjct: 173 VSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAM 232
Query: 511 KLIFKMLDCGIV 522
++ +M + G+
Sbjct: 233 AILRRMEEDGVT 244
>AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:513607-515604 FORWARD
LENGTH=665
Length = 665
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 169/423 (39%), Gaps = 17/423 (4%)
Query: 146 HEVCRILSSSMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYK 205
+ VC+I+ + + ++++L + F + V VL+ + L FF W+ + +K
Sbjct: 219 NRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFK 278
Query: 206 HTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNC 265
H ++YN ++ K +++ E+R Y + ET+ + + + + A+
Sbjct: 279 HDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVEL 338
Query: 266 FKEIKADGYS--PSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLG 323
F+ A S P+ L+ + K +D + G+V +++ L
Sbjct: 339 FEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLK 398
Query: 324 CLCEVGSVLEARKCTDSLKKIGYTVPLS--YSLIIRALCRAGKVEEALALAGEVVGAEKS 381
L V ++ + ++ + GY VP S+I L R GK +EA L + A +
Sbjct: 399 SLRSVDRFGQSNEVLKAMNEGGY-VPSGDLQSVIASGLSRKGKKDEANELVN-FMEASGN 456
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAM-KQQGIKLTIHVYTSLIVHFFKEKQVGKAM 440
LD S++ LE+A M ++G+ + + L++ + Q
Sbjct: 457 HLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVY 516
Query: 441 EIIEEM-QQSGYEPNVVTCSALIRGYMNVERPID-----AWNVFYRMKLKGPFPDFETYS 494
++ E+ +Q+ +P T ++R + + D A ++ M+ G FP F
Sbjct: 517 KLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHG-FPPF--VD 573
Query: 495 MLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDL 554
+ L G S EA + K + PS VF + + + A+ +L
Sbjct: 574 PFMDYLSNSGTSAEAFAFL-KAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSY 632
Query: 555 IRR 557
IRR
Sbjct: 633 IRR 635
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 242 TSETWTIMIMLYGRIGLTNMAMNCFKEIKAD-GYSPSRSTYKYLIIALCGRKGRKVDDAL 300
+ T+ M++ + R G T M ++E++ + G SP+ +Y L+ A C R + +A
Sbjct: 244 NATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARG--LMSEAE 301
Query: 301 KMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDS--LKKIGYTVPLSYSLIIRA 358
K++ EM G V D T +G LC V++A++ LK I T L+Y ++
Sbjct: 302 KVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTC-LTYEHLVNG 360
Query: 359 LCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALL--RKGR--LEDALAKIDAMK 412
C+AG V+ L + E+ G E D +T +++ L R G+ +E A DA++
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEA---DGLTIEALVEGLCDDRDGQRVVEAADIVKDAVR 417
Query: 413 QQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGY 465
+ + + Y L+ ++ ++ +A+ I EM G++P+ T A I GY
Sbjct: 418 EAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/444 (19%), Positives = 180/444 (40%), Gaps = 51/444 (11%)
Query: 158 WSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVR------------------ 199
WS ++ L+ S FTP E+ H L FF + R
Sbjct: 58 WSTLR-SLQPSG--FTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHI 114
Query: 200 --KQPGYKHTAESYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIG 257
+ H +E LA+++A + +D + +F + ++ S + +++ +
Sbjct: 115 LSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLD 174
Query: 258 LTNM--AMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR----------------KVDDA 299
+ A+ +++++ G + ST LI + R+G VD+A
Sbjct: 175 SKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEA 234
Query: 300 LKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPL-SYSLIIRA 358
KM G++ + ++ Y E + + R + +++G + + SY++++ A
Sbjct: 235 KKMIGKIKPNATTFNSMMVSFYR----EGETEMVERIWREMEEEVGCSPNVYSYNVLMEA 290
Query: 359 LCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKL 418
C G + EA + E + D V ++I L + A M +GI+
Sbjct: 291 YCARGLMSEAEKVWEE-MKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIEC 349
Query: 419 TIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM---NVERPIDAW 475
T Y L+ + K V + + EM++ G+E + +T AL+ G + +R ++A
Sbjct: 350 TCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAA 409
Query: 476 NVFYRMKLKGPF-PDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFG 534
++ + F P Y +L+ LC+ G+ + A+ + +M+ G PS +R G
Sbjct: 410 DIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Query: 535 LNREGKRDLARVVLQQKSDLIRRR 558
G + + ++ + ++ ++ R
Sbjct: 470 YGIVGDEETSALLAIEMAESLKLR 493
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 134/330 (40%), Gaps = 20/330 (6%)
Query: 225 KHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYL 284
+ RN+F EM + TW MI Y R GL + A F+E+K P
Sbjct: 163 NYARNVFDEMSHRDVV----TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCN- 217
Query: 285 IIALCGRKGR-KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKK 343
I++ CGR G + + A+ Y +I D L+ + G + AR + +K
Sbjct: 218 IVSACGRTGNMRYNRAI--YEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR---EFFRK 272
Query: 344 IGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLED 403
+ + ++ + G++++A +V+ + D V ++I A + ++
Sbjct: 273 MSVRNLFVSTAMVSGYSKCGRLDDA-----QVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 404 ALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIR 463
AL + M GIK + S+I + KA + + +G E + +ALI
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 464 GYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVP 523
Y +VF +M P + ++S ++ L G + +A+ L +M + P
Sbjct: 388 MYAKCGGLDATRDVFEKM----PRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443
Query: 524 STINFRTVFFGLNREGKRDLARVVLQQKSD 553
+ + F V +G + G + + + +D
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 24/292 (8%)
Query: 226 HMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLI 285
+ R LF EM T WT+MI + + A++ F+E+ A G P+ T+ ++
Sbjct: 76 NARKLFDEMSHR----TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 286 IALCGRKGRKVDDALKMYGEMINAG----HVPDKELIETYLGCLCEVGSVLEARKCTDSL 341
+ G R + +++G +I G V L + Y C G EA + SL
Sbjct: 132 RSCAGL--RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKC----GQFKEACELFSSL 185
Query: 342 KKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRL 401
+ +S++++I +L A K EAL E+V A ++ T ++ A G L
Sbjct: 186 QNAD---TISWTMMISSLVGARKWREALQFYSEMVKAGVPP-NEFTFVKLLGASSFLG-L 240
Query: 402 EDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSAL 461
E + +GI L + + TSL V F+ Q K + + + SG E +V +++
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSL-VDFY--SQFSKMEDAVRVLNSSG-EQDVFLWTSV 296
Query: 462 IRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLI 513
+ G++ R +A F M+ G P+ TYS +L+ LC RS + K I
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS-LCSAVRSLDFGKQI 347
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 15/298 (5%)
Query: 246 WTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGE 305
W MI + G A+ F E+ DG SP ST ++ +C + +++G
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA-AVLTVCSSH-PSLPRGKEIHGY 576
Query: 306 MINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKV 365
+ AG +L + + GS+ AR+ D L ++ P+S S +I + G +
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD---PVSCSSLISGYSQHGLI 633
Query: 366 EEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDAL-AKIDA-MKQQGIKLTIHVY 423
++ L ++V ++D SI+ A E +L A++ A + + G+ V
Sbjct: 634 QDGFLLFRDMV-MSGFTMDSFAISSILKAAALSD--ESSLGAQVHAYITKIGLCTEPSVG 690
Query: 424 TSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKL 483
+SL+ + K + + ++ P+++ +ALI Y + +A V+ MK
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQING----PDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 484 KGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML-DCGIVPSTINFRTVFFGLNREGK 540
KG PD T+ +L+ G EE+ + M+ D GI P ++ + L R G+
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGR 804
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 325 LCEVGSVLEARKCTDSLKKIGYTVPLS---YSLIIRALCRAGKVEEALALAGEVVGAEKS 381
L + G EA + + +K G +P S YS++IRA A +V L E G +K
Sbjct: 258 LAKSGRAFEALEVLEEMKDKG--IPESSELYSMLIRAFAEAREVVITEKLFKEA-GGKKL 314
Query: 382 SLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAME 441
D C ++ +R+G +E L + AM++ +K+T + +++ F K++ +A++
Sbjct: 315 LKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVK 374
Query: 442 IIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLC 501
+ E + E VT + I Y +E+ A +F M KG YS ++
Sbjct: 375 VYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYG 434
Query: 502 KVGRSEEAMKLIFKMLDCGIVPS 524
K R +A++L+ KM G P+
Sbjct: 435 KTRRLSDAVRLMAKMKQRGCKPN 457
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 18/269 (6%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
+W ++ Y + G+ MA+ K + + PS T ++ A+ R + +++G
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL--RLISVGKEIHG 260
Query: 305 EMINAGHVP----DKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALC 360
+ +G L++ Y C GS+ AR+ D + + +S++ +I A
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKC----GSLETARQLFDGMLERNV---VSWNSMIDAYV 313
Query: 361 RAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTI 420
+ +EA+ + +++ D G++ HA G LE + G+ +
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGAL-HACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 421 HVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYR 480
V SLI + K K+V A + ++Q +V+ +A+I G+ RPIDA N F +
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 481 MKLKGPFPDFETYSMLLTCLCKVGRSEEA 509
M+ + PD TY ++T + ++ + A
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHA 457
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 173/423 (40%), Gaps = 47/423 (11%)
Query: 155 SMDWSLIQEKLEKSAIRFTPEFVVEVLQICNKYGHNVLNFFSWVRKQPGYKHTAESYNLA 214
S D L ++ KS + + +E L +CN++ F + + +K +Y+
Sbjct: 73 SKDQILDDTQISKSGVTICSQ--IEKLVLCNRF-REAFELFEILEIRCSFKVGVSTYDAL 129
Query: 215 IKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGY 274
++ + K + ++ ++ M N + +++++ + G+ A F EI
Sbjct: 130 VEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI----- 184
Query: 275 SPSRSTYKYL-IIALCGRKGRKVD--DALKMYGEMINAGHV--------PDKELIETYLG 323
P R+ Y Y II+ G V+ + KM E ++ L Y+G
Sbjct: 185 -PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 324 -----CLCEVGSVLEA----------RKCTD------SLKKIGYTVPLSYSLIIRALCRA 362
C ++G V KC D + + + ++++ +I
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 363 GKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
G EEAL L ++ + S+DQ T +I + +LE ++ + G + I
Sbjct: 304 GYSEEALCLLYDMRDS-GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMK 482
T+L+ + K +V A + +++ + N+++ +AL+ GY N R DA +F +M
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRK----NIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 483 LKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDC-GIVPSTINFRTVFFGLNREGKR 541
P+ T+ +L+ G SE+ ++ M + GI P +++ + L R+G
Sbjct: 419 AANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLL 478
Query: 542 DLA 544
D A
Sbjct: 479 DEA 481
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 20/282 (7%)
Query: 245 TWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYG 304
+W +I + R T A+ F+ + DG+ PS +Y L A C G ++ ++
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA-CSSTGF-LEQGKWVHA 286
Query: 305 EMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGK 364
MI +G T L + GS+ +ARK D L K +S++ ++ A + G
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV---VSWNSLLTAYAQHGF 343
Query: 365 VEEALALAGEV--VGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHV 422
+EA+ E+ VG ++++ S++ A G L++ + MK+ GI
Sbjct: 344 GKEAVWWFEEMRRVGIRP---NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 423 YTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALI---RGYMNVERPIDAWNVFY 479
Y +++ + + +A+ IEEM EP AL+ R + N E A +
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVF 457
Query: 480 RMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
+ P P + +L GR +A ++ KM + G+
Sbjct: 458 ELDPDDPGP----HVILYNIYASGGRWNDAARVRKKMKESGV 495
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 8/207 (3%)
Query: 294 RKVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYS 353
R + D +++ MI ++P L L + + +ARK D + + +S++
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV---VSWT 122
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
+I + G EAL + E++ ++ ++ T +++ + +R L + +
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPID 473
I V +SL+ + K Q+ +A EI E + E +VV+C+A+I GY + +
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP----ERDVVSCTAIIAGYAQLGLDEE 237
Query: 474 AWNVFYRMKLKGPFPDFETYSMLLTCL 500
A +F+R+ +G P++ TY+ LLT L
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTAL 264
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 33/177 (18%)
Query: 345 GYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDA 404
GYT SY +I LC+ G++++AL L ++ E L I++ L +K R+E+A
Sbjct: 121 GYTRKHSYETLIARLCKLGRIDDALVLINDMAIGE-FGLSTCVFHPILNTLTKKNRIEEA 179
Query: 405 LAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRG 464
++ M+ I + + Y + + V +A ++ +M++ E V++
Sbjct: 180 WRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEE--EEGVMS------- 230
Query: 465 YMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGI 521
PD TY L+ CK GR E AM ++ +M + G+
Sbjct: 231 -----------------------PDTRTYDALVLGACKSGRVEAAMAILRRMEEEGL 264
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 14/227 (6%)
Query: 320 TYLGCLCEVGSVLEARKCTDSLKKIGY------TVP--LSYSLIIRALCRAGKVEEALAL 371
T C + ++ A++ ++S+ Y VP +SY+ II A C G V+EAL +
Sbjct: 179 TVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEV 238
Query: 372 AGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFF 431
++ + VT + L++ GR+ DA + + M +G VY +LI +
Sbjct: 239 YRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYL 298
Query: 432 KEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM---NVERPIDAWNVFYRMKLKGPFP 488
KA+E +E++ + + + + + N + ++++ K + P
Sbjct: 299 DLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPP 358
Query: 489 DFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINFRTVFFGL 535
T ++LL K G+ +EA L +MLD P+ ++ + G+
Sbjct: 359 ---TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGI 402
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 144/333 (43%), Gaps = 19/333 (5%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEI 269
S+NL I K+++ L EM RN TS T +++ ++ ++ + +
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 270 KADGYSPSRSTYKYLI--IALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCE 327
PS L+ A CG ++D A++++ M + +++ Y+ E
Sbjct: 263 SECKTEPSLRLENALVNAYAACG----EMDIAVRIFRSMKARDVISWTSIVKGYV----E 314
Query: 328 VGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
G++ AR D + +S++++I RAG E+L + E+ A D+ T
Sbjct: 315 RGNLKLARTYFDQMP---VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP-DEFT 370
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
S++ A G LE + + IK + V +LI +FK KA ++ +M
Sbjct: 371 MVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD 430
Query: 448 QSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSE 507
Q + T +A++ G N + +A VF++M+ PD TY +L+ G +
Sbjct: 431 QR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 508 EAMKLIFKML-DCGIVPSTINFRTVFFGLNREG 539
+A K KM D I PS +++ + L R G
Sbjct: 487 QARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 392 IHALLRKGRLEDALAKIDAMKQQ-GIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSG 450
+H + R E A+ + +++Q K + +Y LIV K KQ KA E+ +EM G
Sbjct: 121 LHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEG 180
Query: 451 YEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPF-PDFETYSMLLTCLCKVGRSEEA 509
N +AL+ Y R A+ + RMK PD TYS+L+ +V ++
Sbjct: 181 CVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKV 240
Query: 510 MKLIFKMLDCGIVPSTINFRTVFFGLNREGKRDLARVVLQQKSDLIR 556
L+ M GI P+TI + T+ ++ GK A++ ++ +S LI+
Sbjct: 241 QDLLSDMRRQGIRPNTITYNTL---IDAYGK---AKMFVEMESTLIQ 281
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 116/258 (44%), Gaps = 5/258 (1%)
Query: 210 SYNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTSETWTIMIMLYGRIGL-TNMAMNCFKE 268
+Y++ IK + F +++L +MRR + T+ +I YG+ + M +
Sbjct: 223 TYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQM 282
Query: 269 IKADGYSPSRSTYKYLIIALCGRKGRKVDDALKMYGEMINAGHVPDKELIETYLGCLCEV 328
+ D P T + A G +++ Y + ++G P+ L +
Sbjct: 283 LGEDDCKPDSWTMNSTLRAFGGNG--QIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKS 340
Query: 329 GSVLEARKCTDSLKKIGYT-VPLSYSLIIRALCRAGKVEEALALAGEVVGAEKSSLDQVT 387
G+ + + ++K Y+ ++Y+++I A RAG +++ L ++ +E+ VT
Sbjct: 341 GNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF-RLMQSERIFPSCVT 399
Query: 388 CGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQ 447
S++ A R + + + ++ I+L + + L+ + + ++ + ++E M+
Sbjct: 400 LCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELME 459
Query: 448 QSGYEPNVVTCSALIRGY 465
+ G++P+ +T +++ Y
Sbjct: 460 KKGFKPDKITYRTMVKAY 477
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 349 PLSYSLIIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALLRKGRLEDALA 406
++ S ++ A+ +G + + +V+ G E D + SII + GR+E A
Sbjct: 287 AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED---DVIVGTSIIDMYCKCGRVETARK 343
Query: 407 KIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYM 466
D MK + ++ +T++I + KA+E+ M SG PN +T +++
Sbjct: 344 AFDRMKNKNVR----SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 467 NVERPIDAWNVFYRMKLK-GPFPDFETYSMLLTCLCKVGRSEEAMKLIFKM 516
+ ++ W F MK + G P E Y ++ L + G ++A LI +M
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 143/325 (44%), Gaps = 28/325 (8%)
Query: 235 RRNNYPVTSETWTIMIMLYGRIGLTNMAMNCFKEIKADGYSPSRSTYKYLIIALCGRKGR 294
+R++ P W +I Y +G AM + ++ DG P R T+ ++ A G
Sbjct: 155 KRDSSPFA---WNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSV 211
Query: 295 KVDDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSL 354
++ +A+ + +++ G D ++ + + G +++AR D + Y +S++
Sbjct: 212 QIGEAI--HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDY---VSWNS 266
Query: 355 IIRALCRAGKVEEALALAGEVV--GAEKSSLDQVTCGSIIHALL--RKGRLEDALAKIDA 410
++ G + EAL + +V G E D+V S++ +L + GR
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEP---DKVAISSVLARVLSFKHGRQLHGW----- 318
Query: 411 MKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEPNVVTCSALIRGYMNVER 470
+ ++G++ + V +LIV + K Q+G+A I ++M E + V+ +A+I +
Sbjct: 319 VIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM----LERDTVSWNAIISAHSKNSN 374
Query: 471 PIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKML-DCGIVPSTINFR 529
+ + +R K PD T+ +L+ G E+ +L M + GI P ++
Sbjct: 375 GLKYFEQMHRANAK---PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYA 431
Query: 530 TVFFGLNREGKRDLARVVLQQKSDL 554
+ R G + A ++ Q+ L
Sbjct: 432 CMVNLYGRAGMMEEAYSMIVQEMGL 456
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 22/246 (8%)
Query: 297 DDALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDS-LKKIGYTVPL--SYS 353
D AL Y EM+ G+ PD Y+ C ++ C + K G+ V + S
Sbjct: 89 DKALIFYQEMLRKGYSPDY-FTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTC 147
Query: 354 LIIRALCRAGKVEEALALAGEVVGAEKSSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQ 413
L+ +C G+V L + ++ + V GS+I + R DA+ M+
Sbjct: 148 LLHMYMC-CGEVNYGLRVFEDI-----PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 414 QGIKLTIHVYTSLIVHFFKEKQVGKAMEIIEEMQQSGYEP--------NVVTCSALIRGY 465
G+K + L+V + K + +Q G++P NV+ ++LI Y
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMY 261
Query: 466 MNVERPIDAWNVFYRMKLKGPFPDFETYSMLLTCLCKVGRSEEAMKLIFKMLDCGIVPST 525
A +F M P +++ ++T + G +EEA+ + MLD GI P
Sbjct: 262 AKCGDLRTARYLFDGM----PERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK 317
Query: 526 INFRTV 531
+ F +V
Sbjct: 318 VTFLSV 323
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 52/335 (15%)
Query: 211 YNLAIKIAVSGKDFKHMRNLFFEMRRNNYPVTS-ETWTIMIMLYGRIGLTNMAMNCFKEI 269
+N +I + S D ++ R +F E PV +W +I Y +IG A+ +K +
Sbjct: 194 HNASIHMFASCGDMENARKVFDE-----SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248
Query: 270 KADGYSPSRSTYKYLI--IALCG--RKGRKV-----DDALKMYGEMINAGHVPDKELIET 320
+++G P T L+ ++ G +G++ ++ L+M ++NA L++
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNA-------LMDM 301
Query: 321 YLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIRALCRAGKVEEALALAGEVVGAEK 380
+ C G + EAR+ D+L+K +S++ +I R G ++ + L ++ EK
Sbjct: 302 FSKC----GDIHEARRIFDNLEK---RTIVSWTTMISGYARCGLLDVSRKLFDDM--EEK 352
Query: 381 SSLDQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIK----LTIHVYTSLIVHFFKEKQV 436
D V ++I ++ R +DALA M+ K IH ++ Q+
Sbjct: 353 ---DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC-------SQL 402
Query: 437 GK---AMEIIEEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRMKLKGPFPDFETY 493
G + I +++ NV ++L+ Y +A +VF+ ++ + TY
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL----TY 458
Query: 494 SMLLTCLCKVGRSEEAMKLIFKMLDCGIVPSTINF 528
+ ++ L G + A+ +M+D GI P I F
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 493
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 125/317 (39%), Gaps = 62/317 (19%)
Query: 245 TWTIMIMLYGR-IGLTNMAMNCFKEIKADGY-SPSRSTYKYLIIALCG-----RKGRKVD 297
+WT +I Y + L A+N F E+ G+ P+ T+ A CG R G++V
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA-CGNLSDPRVGKQV- 395
Query: 298 DALKMYGEMINAGHVPDKELIETYLGCLCEVGSVLEARKCTDSLKKIGYTVPLSYSLIIR 357
G+ G + + + + + + +A++ +SL + +SY+ +
Sbjct: 396 -----LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL---VSYNTFLD 447
Query: 358 ALCRAGKVEEALALAGEV---------------------VGAEKS-------------SL 383
CR E+A L E+ VG+ + S
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 384 DQVTCGSIIHALLRKGRLEDALAKIDAMKQQGIKLTIHVYTSLIVHFFKEKQVGKAMEII 443
+Q C ++I + G ++ A + M+ + + +TS+I F K + +E
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVI----SWTSMITGFAKHGFAIRVLETF 563
Query: 444 EEMQQSGYEPNVVTCSALIRGYMNVERPIDAWNVFYRM----KLKGPFPDFETYSMLLTC 499
+M + G +PN VT A++ +V + W F M K+K P E Y+ ++
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK---PKMEHYACMVDL 620
Query: 500 LCKVGRSEEAMKLIFKM 516
LC+ G +A + I M
Sbjct: 621 LCRAGLLTDAFEFINTM 637