Miyakogusa Predicted Gene
- Lj0g3v0149199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0149199.1 Non Chatacterized Hit- tr|I1K944|I1K944_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12595
PE,63.81,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Galactose oxidase, beta-propeller; s,CUFF.9136.1
(353 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G24540.1 | Symbols: AFR | Galactose oxidase/kelch repeat supe... 320 9e-88
AT1G30090.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 219 3e-57
AT1G55270.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 104 1e-22
AT1G22040.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 93 3e-19
AT1G67480.2 | Symbols: | Galactose oxidase/kelch repeat superfa... 88 1e-17
AT1G67480.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 88 1e-17
AT3G61350.1 | Symbols: SKIP4 | SKP1 interacting partner 4 | chr3... 74 1e-13
AT1G80440.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 68 1e-11
AT5G60570.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 67 1e-11
AT1G16250.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 67 1e-11
AT3G63220.2 | Symbols: | Galactose oxidase/kelch repeat superfa... 67 2e-11
AT3G63220.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 67 2e-11
AT1G27420.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 64 2e-10
AT2G44130.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 64 2e-10
AT1G26930.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 54 2e-07
AT1G31350.1 | Symbols: KUF1 | KAR-UP F-box 1 | chr1:11221519-112... 53 3e-07
AT2G21950.1 | Symbols: SKIP6 | SKP1 interacting partner 6 | chr2... 52 9e-07
>AT2G24540.1 | Symbols: AFR | Galactose oxidase/kelch repeat
superfamily protein | chr2:10426414-10427532 FORWARD
LENGTH=372
Length = 372
Score = 320 bits (820), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 232/368 (63%), Gaps = 36/368 (9%)
Query: 5 EGDKEREPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAF---KKTLSRS- 60
E + +PLI GLP+++AELCLL +PYPY AL RSVSSSWN+ IT+P F K++LS S
Sbjct: 20 ETRTKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRFLFSKQSLSISS 79
Query: 61 -YLFVVAVNKATGKIQWQALDPSSVRWFVLPPMP--LSDAGGQTSFACASLPRQGKLFVM 117
YLFV A NK+T +IQWQ+LD +S RWFVLPPMP + + +CAS+PRQGKLFV+
Sbjct: 80 PYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASMPRQGKLFVL 139
Query: 118 G----MKTAVVYSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVG-------ERGTGI-- 164
G ++AVVY+ TN+WS S + R++F + VNG+I+AVG E T +
Sbjct: 140 GGGDVNRSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGGNGEATTEVES 199
Query: 165 YDPEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERDTWREMR 224
YDP+ D WT L L +Y++A + ++ VTEGW WPF P G YDS+ TWREM
Sbjct: 200 YDPDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPMGQVYDSDEGTWREMS 259
Query: 225 EGLRDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFPREAMQRPFCGRG 284
G+++GWTGVSV + +LFVI E+GD P+K Y DTWR V+G++ E M+RPF G
Sbjct: 260 GGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYVSGEKLQGEKMRRPFAVTG 319
Query: 285 LDGKIYVVSSGLNVAIGSVVFVNNVPQHDSHXXXXXXXXXXXXELTWQVVEAPPAFREFS 344
D +++VV+SG+NVA G V N + W++V +P + +FS
Sbjct: 320 ADDRVFVVASGINVAEGRVSEGQN----------------GDFSVEWRMVSSPKSSIQFS 363
Query: 345 PSSCQVLY 352
P+SC VLY
Sbjct: 364 PASCHVLY 371
>AT1G30090.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:10559746-10560942 REVERSE
LENGTH=398
Length = 398
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 182/366 (49%), Gaps = 41/366 (11%)
Query: 11 EPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAI----THPAFKKTL--SRSYLFV 64
EPLIPGLPD+VA CLL VP +SV W+ T A +K +LFV
Sbjct: 51 EPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFV 110
Query: 65 VAVNKATGKIQWQALDPSSVRWFVLPPMPLSDAGGQTSFACASLPRQGKLFVMG------ 118
V ++ TGKIQW+ LD ++ W +P MP D F S+PR+G +FV G
Sbjct: 111 VGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVSDS 170
Query: 119 ---MKTAVVYSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGERGTGIY--------DP 167
+ + Y N W+V + + RSFFA+ ++G I A G +Y +P
Sbjct: 171 DCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYELDCAEVLNP 230
Query: 168 EKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERDTWREMREGL 227
W + + + Y+ A + GK+ VTEGW WPF PRG YD D W M GL
Sbjct: 231 LDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFVSPRGQVYDPRTDQWETMSMGL 290
Query: 228 RDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFPREAMQRPFCGRGLDG 287
R+GWTG SV + +LF++ E + +K YD TD+W + G P E + RPF
Sbjct: 291 REGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETINGPELP-EQICRPFAVNCYGN 349
Query: 288 KIYVVSSGLNVAIGSVVFVNNVPQHDSHXXXXXXXXXXXXELTWQVVEAPPAFREFSPSS 347
++YVV L++A+G N+ Q ++ + W+VVE+P + + +PS+
Sbjct: 350 RVYVVGRNLHLAVG------NIWQSENKFA-----------VRWEVVESPERYADITPSN 392
Query: 348 CQVLYA 353
Q+L+A
Sbjct: 393 SQILFA 398
>AT1G55270.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:20618333-20619925 REVERSE
LENGTH=434
Length = 434
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 30/282 (10%)
Query: 5 EGDKEREPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAF---KKTLSRSY 61
E + + PL+PGLPD++A CL+ VP +R V W R + F +K L S
Sbjct: 70 ERTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSE 129
Query: 62 LFVVAVNK-ATGKIQWQALDPSSVRWFVLPPMP--LSDAGGQTSFACASLPRQGKLFVMG 118
+V + GKI W DP S W LPP+P S+A G F CA L L++ G
Sbjct: 130 EWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVG---FGCAVLS-GCHLYLFG 185
Query: 119 --------MKTAVVYSTATNQWSVASGVPGGRSFFAAEEVNGRI-VAVGE--------RG 161
M+ + Y+ TN+W A + R FF +N + VA GE R
Sbjct: 186 GKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRS 245
Query: 162 TGIYDPEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERDTWR 221
+YDP K++W+ A +S + + K ++ AYD E ++W
Sbjct: 246 AEVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVMSE---AYDPEVNSWS 302
Query: 222 EMREGLRDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTW 263
+ +G+ GW ++ G+L+ + ++ +DE TD+W
Sbjct: 303 PVSDGMVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSW 344
>AT1G22040.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:7768370-7769797 FORWARD
LENGTH=475
Length = 475
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 146/369 (39%), Gaps = 84/369 (22%)
Query: 13 LIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHP---AFKKTLSRSYLFVVAVNK 69
LIP LPDE++ L +P + VR VS W A++ + +K L R+ ++ + K
Sbjct: 43 LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102
Query: 70 A-TGKIQWQALDPSSVRWFVLPPMPL---------------------------------- 94
K+ W ALDP S +W LPPMP+
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162
Query: 95 SDAGGQTSFA-CASLPRQGKLFVMG----MKTAVV---YSTATNQWSVASGVPGGRSFFA 146
D+ Q F CA G L+V+G KT + N WS S + R++
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222
Query: 147 AEEVNGRIVAVGE-----------RGTGIYDPEKDKWTR-------------GAALSGEL 182
+N ++ VG + +YDP D W+ A L+ L
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLADLL 282
Query: 183 KRYEAAAV--EGKVYVTEG-WCWPFTRRPRGWAYDSERDTWREMREGLRDGW------TG 233
K G++ V + + WPF G YD E + W EM G+ +GW T
Sbjct: 283 KPIATGMTCYNGRLCVPQSLYSWPFFVDVGGEVYDPETNLWVEMPSGMGEGWPARQAGTK 342
Query: 234 VSVAVEGKLFVIPEYGDL---PVKFYDEGTDTWRCVAGD--RFPREAMQRPFCGRGLDGK 288
+SV V+G+L+ + +K YD+ DTW+ V G+ + + P+ G GK
Sbjct: 343 LSVVVDGELYAFDPSSSMENGKIKVYDQKEDTWKVVIGEVPVYDLTDSESPYLLAGFHGK 402
Query: 289 IYVVSSGLN 297
++ ++ N
Sbjct: 403 LHFITRDPN 411
>AT1G67480.2 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:25277294-25278529 FORWARD
LENGTH=376
Length = 376
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 129/312 (41%), Gaps = 40/312 (12%)
Query: 11 EPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAFKKT-----LSRSYLFVV 65
+PLIPGLPD+VA+ CL VP + SV W + F + +L+V+
Sbjct: 37 DPLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVL 96
Query: 66 AVNKATGKIQWQALDPSSVRWFVLPPMPLSDAGGQTSFACASLPRQGKLFVMG----MKT 121
+N +W+ +D + LPPMP +T F + GKL V+ +
Sbjct: 97 TMNAGGKDNRWEVMDCLGQKLSSLPPMP---GPAKTGFKVVVV--DGKLLVIAGCCMING 151
Query: 122 AVV-------YSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGERGTG--------IYD 166
++V Y T N WS + + R FA EVNG + VG G +YD
Sbjct: 152 SLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYD 211
Query: 167 PEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWC-WPFTRRPRGWAYDSERDTWREMRE 225
PE WT +L A+A GK+YV G + Y+++ +W
Sbjct: 212 PETCTWTFIESLRRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYNTQCGSW----H 267
Query: 226 GLRDGWTGVSVAVE--GKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFPREAMQRP-FCG 282
G ++G T V+ VE KLF I + ++ +TW VA P R F
Sbjct: 268 GSKNGLTMVTAHVEVGKKLFCIDWKNHRKMSVFNAEDETWEVVA---LPLSGSSRAGFQF 324
Query: 283 RGLDGKIYVVSS 294
L GK+ + SS
Sbjct: 325 GKLSGKLLLFSS 336
>AT1G67480.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:25277294-25278529 FORWARD
LENGTH=376
Length = 376
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 129/312 (41%), Gaps = 40/312 (12%)
Query: 11 EPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAFKKT-----LSRSYLFVV 65
+PLIPGLPD+VA+ CL VP + SV W + F + +L+V+
Sbjct: 37 DPLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVL 96
Query: 66 AVNKATGKIQWQALDPSSVRWFVLPPMPLSDAGGQTSFACASLPRQGKLFVMG----MKT 121
+N +W+ +D + LPPMP +T F + GKL V+ +
Sbjct: 97 TMNAGGKDNRWEVMDCLGQKLSSLPPMP---GPAKTGFKVVVV--DGKLLVIAGCCMING 151
Query: 122 AVV-------YSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGERGTG--------IYD 166
++V Y T N WS + + R FA EVNG + VG G +YD
Sbjct: 152 SLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYD 211
Query: 167 PEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWC-WPFTRRPRGWAYDSERDTWREMRE 225
PE WT +L A+A GK+YV G + Y+++ +W
Sbjct: 212 PETCTWTFIESLRRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYNTQCGSW----H 267
Query: 226 GLRDGWTGVSVAVE--GKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFPREAMQRP-FCG 282
G ++G T V+ VE KLF I + ++ +TW VA P R F
Sbjct: 268 GSKNGLTMVTAHVEVGKKLFCIDWKNHRKMSVFNAEDETWEVVA---LPLSGSSRAGFQF 324
Query: 283 RGLDGKIYVVSS 294
L GK+ + SS
Sbjct: 325 GKLSGKLLLFSS 336
>AT3G61350.1 | Symbols: SKIP4 | SKP1 interacting partner 4 |
chr3:22703203-22704374 FORWARD LENGTH=358
Length = 358
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 138/335 (41%), Gaps = 45/335 (13%)
Query: 5 EGDKEREPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAF-----KKTLSR 59
+ ++ + LI G+PD++++ CL VP Y ++ VS W + + L+
Sbjct: 13 QSNETQIALISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMCDYRNEFNLAE 72
Query: 60 SYLFVVAVNKATGKIQWQALDPSSVR--WFVL---PPMPLSDAGGQTSFACASLPRQGKL 114
S+++ + +G + L+P S R W + P +P+ + G +L
Sbjct: 73 SWIYALC-RDISGGVFLHMLNPFSSRRSWKRINDYPYIPMREGMGFAVLG-------KRL 124
Query: 115 FVMG--------MKTAVVYSTATNQW-SVASGVPGGRSFFAAEEVNGRIVAVGERGTG-- 163
FV+G Y A N W V + R +FA E ++G+I+A+G G
Sbjct: 125 FVLGGCGWLEDATDEIYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGLNPN 184
Query: 164 ------IYDPEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSER 217
IYDP + ++ + ++ ++G++Y+ G T Y +
Sbjct: 185 AKRTWDIYDPLTRTCKSCSDVNIVPEMEDSFVMDGRIYIRGGVGGSSTA-----VYSASS 239
Query: 218 DTWREMREGLRDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFPREAMQ 277
W M + + GW G +V V G L+V+ + + + + T W + + + M+
Sbjct: 240 GIWERMDDDMASGWRGPAVVVAGDLYVLDQTFGAKLTMWCKDTRMW--IHIGKLSQLVMK 297
Query: 278 RPFCGRGLDGKIYVVSSGLNVAIGSVVFVNNVPQH 312
+P + I+V+ + V+ V NV ++
Sbjct: 298 QPCRLVSIGNSIFVIGKDCSTV---VIDVENVRKN 329
>AT1G80440.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:30241763-30242827 FORWARD
LENGTH=354
Length = 354
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 41/224 (18%)
Query: 13 LIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAF--KKTLSRSYLFVVAVNKA 70
LIP LPD+VA CLL Y ++ SV +WNR ++ F ++ SR ++ +++A
Sbjct: 3 LIPNLPDDVARECLLRSSYQQFPVIASVCRAWNREVSLSQFLHQRKASRHSQELLILSQA 62
Query: 71 ------TGKI------QWQALDPSSVRWFVLPPMPLSDAGGQTS---FACASLPRQGKLF 115
+GKI + L+ S W LPP+P GQT C + L
Sbjct: 63 RVDPAGSGKIIATPEYRISVLESGSGLWTELPPIP-----GQTKGLPLFCRLVSVGSDLI 117
Query: 116 VMG---------MKTAVVYSTATNQWSVASGVPG-GRSFFAAEEVNGRIVAVGE------ 159
V+G + V+S T++W V + +PG RSFF + R V V
Sbjct: 118 VLGGLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEK 177
Query: 160 ---RGTGIYDPEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGW 200
+YD +DKWT ++ E +A G+ +V G+
Sbjct: 178 CALTSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIGGY 221
>AT5G60570.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr5:24348713-24349894 FORWARD
LENGTH=393
Length = 393
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 105/278 (37%), Gaps = 36/278 (12%)
Query: 11 EPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHP---AFKKTLSRSYLFVVAV 67
+ ++PGL D+VA CL VP + V+ +N+ I A +K L V V
Sbjct: 47 DSVLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMV 106
Query: 68 NKATGKIQWQALDPSSVRWFVLPPMPLSDAGGQTSFACASLPRQGKLFVMGMKTAVV--- 124
G W P +W VLP MP + SL +L V G +
Sbjct: 107 CDPRG---WLMFSPMKKKWMVLPKMPCDECFNHADK--ESLAVDDELLVFGRELFQFAIW 161
Query: 125 -YSTATNQWSVASGVPGGRSFFAA------------EEVNGRIVAVGERGTGIYDPEKDK 171
YS + W G+ R FA+ ++NG I+A E +YD +
Sbjct: 162 KYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAE----LYDSSSGR 217
Query: 172 WTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERDTWREMREGLRDGW 231
W + + ++GK YV G P G +D E WR++ EG+
Sbjct: 218 WEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPNVSVTFGEEFDLETRKWRKI-EGMYPNV 276
Query: 232 TGVS------VAVEGKLFVIPEYGDLPVKFYDEGTDTW 263
+ V V +LF + EY VK YD+ + W
Sbjct: 277 NRAAQAPPLVVVVNNELFTL-EYSTNMVKKYDKVKNKW 313
>AT1G16250.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:5557214-5558697 FORWARD
LENGTH=383
Length = 383
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 120/323 (37%), Gaps = 47/323 (14%)
Query: 11 EPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWN---RAITHPAFK--KTLSRSYLFVV 65
+ +IPGLPD++A C+ + + Y ++ VS W R + +K S S+LFV+
Sbjct: 6 QSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVL 65
Query: 66 AVNKATGKIQWQALDPSSVRWFVLP-PMPLSDAGGQTSFACASLPRQGKLFVMG------ 118
K QW A DP + RW LP + D + FAC + L V+G
Sbjct: 66 T---ERSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCV--SNCLLVIGGCYAPS 120
Query: 119 -----------MKTAVVYSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGERGTG---- 163
K + + QW + + + R+ FA V+G++ G R
Sbjct: 121 VSSFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRG 180
Query: 164 -----IYDPEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERD 218
+YDP D+W A+ + G +V F + ++
Sbjct: 181 IPSAEVYDPVADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQV-GFAEQNSSEVFNPRDM 239
Query: 219 TWREMRE---GLRDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVAG------D 269
TW + + R V V +++ I ++G+ +K D W V
Sbjct: 240 TWSTVEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLP 299
Query: 270 RFPREAMQRPFCGRGLDGKIYVV 292
PRE + L ++YV+
Sbjct: 300 NHPRELEAFGYGFAALRNELYVI 322
>AT3G63220.2 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:23357540-23358598 REVERSE
LENGTH=352
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 114/297 (38%), Gaps = 72/297 (24%)
Query: 13 LIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAI-THPAFK-KTLSRSYLFVVAVNKA 70
L+ G+P+ VA CL HVP + VS SW AI +H F+ + RS ++ V
Sbjct: 11 LLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCVCAF 70
Query: 71 TGKIQWQALDPSSVRWFVLPPMP-----LSDAGGQTSFACASLPRQGKLFVMGMKTAVV- 124
+ WQ P+ RW LP +P L+ G T+ G LFV+G + V
Sbjct: 71 DPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTT--------AGMLFVLGGGSDAVS 122
Query: 125 -----------------YSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGE-------- 159
Y QW+ + + R+ FA + G+IV G
Sbjct: 123 PVTGDHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSI 182
Query: 160 RGTGIYDPEKDKWTRGAALSGELKR-YEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERD 218
G +YDPE D WT L V GKV+V +G +
Sbjct: 183 SGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLH----------KGLST----- 227
Query: 219 TWREMREGLRDGW--------TGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVA 267
++ E ++ GW G V VE L+V+ + F EG DTW+ VA
Sbjct: 228 --VQVLESVKLGWDVKDYGWPQGPMVVVEDVLYVMSH----GLVFKQEG-DTWKMVA 277
>AT3G63220.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:23357540-23358577 REVERSE
LENGTH=345
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 114/297 (38%), Gaps = 72/297 (24%)
Query: 13 LIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAI-THPAFK-KTLSRSYLFVVAVNKA 70
L+ G+P+ VA CL HVP + VS SW AI +H F+ + RS ++ V
Sbjct: 4 LLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCVCAF 63
Query: 71 TGKIQWQALDPSSVRWFVLPPMP-----LSDAGGQTSFACASLPRQGKLFVMGMKTAVV- 124
+ WQ P+ RW LP +P L+ G T+ G LFV+G + V
Sbjct: 64 DPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTT--------AGMLFVLGGGSDAVS 115
Query: 125 -----------------YSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGE-------- 159
Y QW+ + + R+ FA + G+IV G
Sbjct: 116 PVTGDHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSI 175
Query: 160 RGTGIYDPEKDKWTRGAALSGELKR-YEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERD 218
G +YDPE D WT L V GKV+V +G +
Sbjct: 176 SGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLH----------KGLST----- 220
Query: 219 TWREMREGLRDGW--------TGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVA 267
++ E ++ GW G V VE L+V+ + F EG DTW+ VA
Sbjct: 221 --VQVLESVKLGWDVKDYGWPQGPMVVVEDVLYVMSH----GLVFKQEG-DTWKMVA 270
>AT1G27420.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:9519108-9520520 FORWARD
LENGTH=346
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 102/262 (38%), Gaps = 33/262 (12%)
Query: 7 DKEREPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAI--THPAFKKTLS---RSY 61
+ P+IPGL D+VAELC+ +P + V W + H A + L+ +
Sbjct: 4 ESSSSPIIPGLTDDVAELCVSKIPRSSFQITSQVCRRWRSFLRSQHFAAVRKLTGTVEEF 63
Query: 62 LFVVAVNKATGKIQWQALDPSSVRWFVLPPMPLSDAGGQTSFACASLPRQGKLFVMGMKT 121
L V+ ++ + W+ D S + +PP+P G F A L GK+ G T
Sbjct: 64 LCVLMESECGRDVYWEVFDASGNKLGQIPPVPGPLKRG---FGVAVLD-GGKIVFFGGYT 119
Query: 122 AVVYSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGERGTGIYDPEKDKWTRGAALSGE 181
V + N +V+ A+ +V +DP + W + A ++
Sbjct: 120 E-VEGSGINSTTVS----------ASADVYE------------FDPANNSWRKLAGMNIP 156
Query: 182 LKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERDTWREMREGLRDGWTGVSVAVEGK 241
+ A V G +YV G+ Y+ + + W M R W G + A K
Sbjct: 157 RYNFAFAEVNGLLYVIRGYSTDTYSLSNAEVYNPKTNQWSLMHCPNRPVWRGFAFAFSSK 216
Query: 242 LFVIPEYGDLPVKFYDEGTDTW 263
L+ + G + YD T TW
Sbjct: 217 LYAVGN-GSRFIDIYDPKTQTW 237
>AT2G44130.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr2:18253731-18254960 FORWARD
LENGTH=409
Length = 409
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 113/291 (38%), Gaps = 50/291 (17%)
Query: 13 LIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAF---KKTLSRSYLFVVAVNK 69
LIPGLP E+A CL+ VP+ +Q+ +RSV SW ++ +F ++ ++ L + V
Sbjct: 19 LIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERRRCGKTELLLCLVQP 78
Query: 70 ATGKIQWQALDPSSVRWFVLPPMPLSDAGGQTSFA---CASLPRQGKLFVMGMKTAVVYS 126
T PP+P S + +T + ++F VY+
Sbjct: 79 LT------------------PPIPASKSVDETLMVDEKKSEDESHPRVFCTPRFGLSVYN 120
Query: 127 TATNQWSVASGVPGGRSFFAAEEV----NGRIVAVGERGTGIYDPEKD---------KWT 173
A + W + + E V G+I+ +G P +D KW
Sbjct: 121 AAMSTWHRVAFPEEEQIPLFCECVVLQDAGKILLIGGWDPETLQPTRDVYVLEFAGRKWR 180
Query: 174 RGAALSGELKRYEAAAVE-GKVYVTEGWCWPFTRRPRGWAYDSERDTWRE---MREGLRD 229
RGA + + A+V KVYV G YD E+D W M EG RD
Sbjct: 181 RGAPMKESRSFFACASVSPTKVYVAGGHDDQKNALRSAEVYDVEKDEWSSVTPMTEG-RD 239
Query: 230 GWTGVSVAVEGKLFVIPEYGDLPV-------KFYDEGTDTWRCVAGD-RFP 272
G +V + + V+ YG + YD TD+W + RFP
Sbjct: 240 ECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVWRFP 290
>AT1G26930.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:9336211-9337476 REVERSE
LENGTH=421
Length = 421
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 109/303 (35%), Gaps = 57/303 (18%)
Query: 13 LIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPA------FKKTLSRSYLFVVA 66
LIPG+ + + CL+ + SV+ S I + TL F
Sbjct: 71 LIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQGTLEHWVYFSCH 130
Query: 67 VNKATGKIQWQALDPSSVRWFVLPPMPLSDA---GGQTSFACASLPRQGKLFVMGMKTAV 123
+N +W+A DP S RW LP MP ++ + S A + L V G + +
Sbjct: 131 LN------EWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGT-----DLLVFGWEVSS 179
Query: 124 V----YSTATNQWSVASGVPGGRSFFAAE------------EVNGRIVAVGERGTGIYDP 167
YS TN WS A + R F + + +GRI+ E +Y+
Sbjct: 180 YVIYRYSLLTNSWSTAKSMNMPRCLFGSASYGEIAVLAGGCDSSGRILDTAE----LYNY 235
Query: 168 EKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPR----GWAYDSERDTWREM 223
E W ++ K ++GK YV G P+ G +D + W E+
Sbjct: 236 EDQTWLVLPGMNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKVLTCGEEFDLKTRKWTEI 295
Query: 224 ------REGLRDGWTGVS-----VAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFP 272
R +G + + VAV ++ + V+ YD+ W V P
Sbjct: 296 PEMSPPRSNQGNGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGN--LP 353
Query: 273 REA 275
+A
Sbjct: 354 EQA 356
>AT1G31350.1 | Symbols: KUF1 | KAR-UP F-box 1 |
chr1:11221519-11222706 REVERSE LENGTH=395
Length = 395
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 115/301 (38%), Gaps = 51/301 (16%)
Query: 8 KEREPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAFKKTLSRSYLFVVAV 67
E LI GLPD ++E+CL V P +L+ +V + W R + P F S LFV +
Sbjct: 30 NENSALIEGLPDHISEICLSLVHRP--SLLSAVCTRWRRLLYSPEFPSFPSLYALFVDST 87
Query: 68 N---KATGKIQWQALDPSSVRWFVLPPMPLSDAGGQT-----SFACASLPRQ-----GKL 114
+ + +++ +P S +W+ LPP P + SF +LP Q GKL
Sbjct: 88 SDTGRVNPSVRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPSFISFNLPIQCVSAAGKL 147
Query: 115 FVM---------GMKTAVVYSTATNQWS----------------------VASGVPGGRS 143
++ + +++ ++ WS +ASG+ S
Sbjct: 148 ILIAGSNQQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASGISSQFS 207
Query: 144 FFAAEEVNGRIVAVGERGTGIYDPEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWP 203
A+ V + R ++ EK + R S E +A K+ +
Sbjct: 208 STVAKSVEKLDLTEQNRNNHRFNWEKLRDMRDLRFSREA--IDAVGYRRKLLMVN---VK 262
Query: 204 FTRRPRGWAYDSERDTWREMREGLRDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTW 263
G YD +D W M E + GW G A+E ++ + V+ YD+ W
Sbjct: 263 GDAVKEGAIYDVVKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKREW 322
Query: 264 R 264
R
Sbjct: 323 R 323
>AT2G21950.1 | Symbols: SKIP6 | SKP1 interacting partner 6 |
chr2:9353526-9354644 REVERSE LENGTH=372
Length = 372
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 125/321 (38%), Gaps = 60/321 (18%)
Query: 13 LIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAFKKTLSRSYLFVVAVNKATG 72
LIP L ++VA CL VP + ++ VS ++ T P T A+ AT
Sbjct: 20 LIPLLSEDVALSCLARVPRCHYPILSLVSKTFRSLPTSPLLYATR--------ALVGATE 71
Query: 73 KIQWQALD---PSSVRWFVLPPMPLSDAGGQTSF----ACASLPRQG--------KLFVM 117
I + A+ S WF L LS++ +C S G +++V+
Sbjct: 72 NILYVAIRIPPESGACWFTLLHRTLSNSTNSKMLVPIPSCPSPSLVGSAYVVVDSEIYVI 131
Query: 118 GMKTAVVYSTAT-------NQWSVASGVPGGRSFFAAEEVNGRIVAVG-------ERGTG 163
G V S++ + W S + GR F AA ++G+I +G R
Sbjct: 132 GGSIRDVPSSSVWVLDCRFHTWRRVSNMRVGREFAAAGVIDGKIYVIGGCVVDNWARSIN 191
Query: 164 ---IYDPEKDKWTRGAALSGELKR---YEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSER 217
++D + W A+ E++ + +A +EGKVY G Y+ +
Sbjct: 192 WAEMFDIKTQTWEPVASPGMEVREKWMHASAVMEGKVYAMAD--------RNGVVYEPKE 243
Query: 218 DTWREMREGLRDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFPREAMQ 277
W + L GW G + +E L+ G ++ YD WR + G E++
Sbjct: 244 KKWEMPEKRLDLGWRGRACVIENILYCYDYLGK--IRGYDPKERIWRELKG----VESLP 297
Query: 278 RPFCGRGL---DGKIYVVSSG 295
+ CG + GK+ V+ G
Sbjct: 298 KFLCGATMANRGGKLTVLWEG 318