Miyakogusa Predicted Gene
- Lj0g3v0149169.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0149169.1 Non Chatacterized Hit- tr|D8RKZ1|D8RKZ1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,43,4e-18,Tim17,Mitochondrial inner membrane translocase subunit
Tim17/Tim22/Tim23/peroxisomal protein PMP24; ,CUFF.9146.1
(146 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28900.1 | Symbols: OEP16, ATOEP16-L, ATOEP16-1, OEP16-1 | ou... 149 5e-37
AT4G16160.1 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial impo... 58 3e-09
AT4G16160.2 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial impo... 57 4e-09
>AT2G28900.1 | Symbols: OEP16, ATOEP16-L, ATOEP16-1, OEP16-1 | outer
plastid envelope protein 16-1 | chr2:12414423-12415459
REVERSE LENGTH=148
Length = 148
Score = 149 bits (377), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 84/143 (58%)
Query: 1 MPLXXXXXXXXXPKVDVAIDMGNPFLNLTVDGFLKIGXXXXXXXXXEDTYHIIKKGSISS 60
MP PK+ VA+DMGNPFLNLTVD FLKIG EDTY I KGS+S
Sbjct: 1 MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60
Query: 61 NDFQKTLKKMCKEGAYWGTVAGLYVGMEYGVERIRGRRDWKNAMLGGAVTGALVSAASGD 120
+ + LKK+CKEG YWG G+Y+G EYG+ERIRG RDWKNAML GA TGA++SA
Sbjct: 61 STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120
Query: 121 KSDKXXXXXXXXXXXXXXXEFIN 143
D +F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143
>AT4G16160.1 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial import
inner membrane translocase subunit Tim17/Tim22/Tim23
family protein | chr4:9157545-9158738 FORWARD LENGTH=176
Length = 176
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 25/130 (19%)
Query: 19 IDMGNPFLNLTVDGFLKIGXXXXXXXXXEDTYHIIKKGSISSN----------------- 61
D+G+P LN D F+K + Y + G S+N
Sbjct: 22 FDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFPN 81
Query: 62 ---DFQKTL----KKMCKEGAYWGTVAGLYVGMEYGVERIR-GRRDWKNAMLGGAVTGAL 113
+ K+L K KE WG AGLY G+ YG+ +R G DW+N+ + GA+TGA
Sbjct: 82 LRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGAA 141
Query: 114 VSAASGDKSD 123
++ + +++
Sbjct: 142 MAMTTSERTS 151
>AT4G16160.2 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial import
inner membrane translocase subunit Tim17/Tim22/Tim23
family protein | chr4:9157545-9158738 FORWARD LENGTH=178
Length = 178
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 27/132 (20%)
Query: 19 IDMGNPFLNLTVDGFLKIGXXXXXXXXXEDTYHIIKKGS--------------------- 57
D+G+P LN D F+K + Y + G+
Sbjct: 22 FDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHRF 81
Query: 58 -----ISSNDFQKTLKKMCKEGAYWGTVAGLYVGMEYGVERIR-GRRDWKNAMLGGAVTG 111
SS +K KE WG AGLY G+ YG+ +R G DW+N+ + GA+TG
Sbjct: 82 PNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTG 141
Query: 112 ALVSAASGDKSD 123
A ++ + +++
Sbjct: 142 AAMAMTTSERTS 153