Miyakogusa Predicted Gene
- Lj0g3v0149159.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0149159.1 Non Chatacterized Hit- tr|B9T3N7|B9T3N7_RICCO
Pentatricopeptide repeat-containing protein, putative ,70.5,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; PREDICTED:
HYPOTHETICAL PROTEIN,NULL;,CUFF.9134.1
(495 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 649 0.0
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 182 4e-46
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 182 4e-46
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 182 4e-46
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 9e-43
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 7e-30
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 85 1e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 85 1e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 2e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 79 7e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 73 6e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 71 2e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 70 3e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 1e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 3e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 5e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 62 8e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 62 1e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 60 5e-09
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 58 2e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 55 8e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 54 3e-07
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 51 2e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 50 5e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 9e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 1e-05
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 49 1e-05
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/519 (62%), Positives = 397/519 (76%), Gaps = 25/519 (4%)
Query: 1 MHSIRAIVQAR--FVEAIRRTV---GGIESHVHFR---FLCTE-STQQTQDNLC------ 45
M SI A+++ R FV+AIRRT + +F+ FL T S++++ + C
Sbjct: 1 MRSIIALMRQREYFVQAIRRTTCVASPALNQTNFQASSFLTTLISSKKSPEETCIGSEEE 60
Query: 46 ---------RRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVM 96
RIEKLPKG VGSAL+SWM DGFPV DV+HAINRLRKL NKRALE+M
Sbjct: 61 EEEPNKCLSLRIEKLPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELM 120
Query: 97 EWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKG 156
EW+IRERPYR EL+YSYL+EFT KLHG+S GEKLFTRVP EFQNELLYNNLVIACLD+G
Sbjct: 121 EWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQG 180
Query: 157 VIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTY 216
VIRL+LEYMK+MRELGY SHLV+NRLII +S+P RK ++ K L MKADK TPHVSTY
Sbjct: 181 VIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRK-LIAKDLALMKADKATPHVSTY 239
Query: 217 NILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEK 276
+ILMK+EANEHN++ +++ F MK VEPNE+SYCILA AHAVARL T AE Y E +EK
Sbjct: 240 HILMKLEANEHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEK 299
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERA 336
S+TG+NWSTLD+L+ILYG LG KEL R W+ IR VR+KSY+LA EAF R+G+L+RA
Sbjct: 300 SITGDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRA 359
Query: 337 EEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALG 396
EE+WLEM++ KGLK EQFNS+++VYCK G+I+KA +++ M NG K N+ITYR LALG
Sbjct: 360 EELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALG 419
Query: 397 CLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELH 456
C K+ + ++ALK +E+G L +K + +STPWLETTLSI+E FAEKGDVEN EKLFEE+
Sbjct: 420 CAKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVK 479
Query: 457 KSKYCRYTFVYNTLIKAYAKAKIYDPKLLRRMILGGARP 495
+KY RY FVYN L KAY KAK+YDP L +RM+LGGARP
Sbjct: 480 NAKYNRYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARP 518
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 225/444 (50%), Gaps = 11/444 (2%)
Query: 35 ESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALE 94
++ ++ Q L + I P G +GSAL W+ +G + ++ A+ +LR+ +M RAL+
Sbjct: 123 KTVEKKQSELFKTIVSAP-GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 95 VMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLD 154
+ EW+ + E DY+ ++ T K+ G+ GE ++P F+ E+LY L+ C+
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 155 KGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
G ++ S +M++LG+P+S +++++LH +K + +L M+ + + P +
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKK--IADVLLLMEKENIKPSLL 299
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAV 274
TY IL+ ++ +++ + + MK VE + + + A ++ A L AE ++ +
Sbjct: 300 TYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 275 EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLE 334
E N LL +Y LG E++R+W P+ + + AI+AFG++ ++
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQ 417
Query: 335 RAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLA 394
AE I+ ++ S ++ ++ VY H ++ K L K M +GC+ A T+ L
Sbjct: 418 EAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALI 477
Query: 395 LGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEE 454
+++G E+A L+ + K + NS + I++ ++++GDV N EK+F +
Sbjct: 478 KLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMY------IMDEYSKRGDVHNTEKIFLK 531
Query: 455 LHKSKYCRYTFVYNTLIKAYAKAK 478
+ ++ Y + L++AY AK
Sbjct: 532 MREAGYTSRLRQFQALMQAYINAK 555
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 225/444 (50%), Gaps = 11/444 (2%)
Query: 35 ESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALE 94
++ ++ Q L + I P G +GSAL W+ +G + ++ A+ +LR+ +M RAL+
Sbjct: 123 KTVEKKQSELFKTIVSAP-GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 95 VMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLD 154
+ EW+ + E DY+ ++ T K+ G+ GE ++P F+ E+LY L+ C+
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 155 KGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
G ++ S +M++LG+P+S +++++LH +K + +L M+ + + P +
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKK--IADVLLLMEKENIKPSLL 299
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAV 274
TY IL+ ++ +++ + + MK VE + + + A ++ A L AE ++ +
Sbjct: 300 TYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 275 EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLE 334
E N LL +Y LG E++R+W P+ + + AI+AFG++ ++
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQ 417
Query: 335 RAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLA 394
AE I+ ++ S ++ ++ VY H ++ K L K M +GC+ A T+ L
Sbjct: 418 EAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALI 477
Query: 395 LGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEE 454
+++G E+A L+ + K + NS + I++ ++++GDV N EK+F +
Sbjct: 478 KLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMY------IMDEYSKRGDVHNTEKIFLK 531
Query: 455 LHKSKYCRYTFVYNTLIKAYAKAK 478
+ ++ Y + L++AY AK
Sbjct: 532 MREAGYTSRLRQFQALMQAYINAK 555
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 225/444 (50%), Gaps = 11/444 (2%)
Query: 35 ESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALE 94
++ ++ Q L + I P G +GSAL W+ +G + ++ A+ +LR+ +M RAL+
Sbjct: 123 KTVEKKQSELFKTIVSAP-GLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 95 VMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLD 154
+ EW+ + E DY+ ++ T K+ G+ GE ++P F+ E+LY L+ C+
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 155 KGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
G ++ S +M++LG+P+S +++++LH +K + +L M+ + + P +
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKK--IADVLLLMEKENIKPSLL 299
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAV 274
TY IL+ ++ +++ + + MK VE + + + A ++ A L AE ++ +
Sbjct: 300 TYKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEM 359
Query: 275 EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLE 334
E N LL +Y LG E++R+W P+ + + AI+AFG++ ++
Sbjct: 360 EGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYF--EESLAAIQAFGKLNKVQ 417
Query: 335 RAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLA 394
AE I+ ++ S ++ ++ VY H ++ K L K M +GC+ A T+ L
Sbjct: 418 EAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALI 477
Query: 395 LGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEE 454
+++G E+A L+ + K + NS + I++ ++++GDV N EK+F +
Sbjct: 478 KLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMY------IMDEYSKRGDVHNTEKIFLK 531
Query: 455 LHKSKYCRYTFVYNTLIKAYAKAK 478
+ ++ Y + L++AY AK
Sbjct: 532 MREAGYTSRLRQFQALMQAYINAK 555
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 215/425 (50%), Gaps = 10/425 (2%)
Query: 54 GEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYS 113
G VGSAL W+ G + A+ +LRK +M RAL++ EW+ + + E DY+
Sbjct: 139 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYA 198
Query: 114 YLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGY 173
++ +K+ G GE +P F+ EL+Y L+ + +R + +M++LG+
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 258
Query: 174 PISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLM 233
P+S N+++IL+ + K + +L ++ + + P+++TY IL+ + + +++ +
Sbjct: 259 PLSTFTCNQMLILYK--RVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGME 316
Query: 234 RFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILY 293
+ MK VE + + ++A +A A L AE ++ +E N LL +Y
Sbjct: 317 QIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVY 376
Query: 294 GYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVE 353
GYL E+ RVW E P R + AI AFG+I ++ AE ++ ++ S
Sbjct: 377 GYLQREDEVRRVWKICEENP--RYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSN 434
Query: 354 QFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELG 413
++ ++ VY H ++ + L K M +GC A+T+ + +++G E+A +L
Sbjct: 435 VYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSL--- 491
Query: 414 KRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
+ +K+++ P + + + ++ + +GDV N EK+F+ + ++ Y + Y TLI+A
Sbjct: 492 SKAIQSKQIK---PLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQA 548
Query: 474 YAKAK 478
Y AK
Sbjct: 549 YVNAK 553
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 196/420 (46%), Gaps = 13/420 (3%)
Query: 75 DVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
+V I +LR + AL++ E V+ ER D + ++ K I+ GE F
Sbjct: 57 EVGDTIKKLRNRGLYYPALKLSE-VMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVD 115
Query: 135 VPSEFQNELLYNNLVIACLDKGVIRLSLE-YMKRMRELGYPISHLVFNRLIILHSSPSLR 193
+P + EL Y +L + C K ++ E + +M+EL S + +N L+ L++
Sbjct: 116 LPETSKTELTYGSL-LNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTG-E 173
Query: 194 KNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLM-KLRQVEPNEISYC 252
+P ++ ++KA+ V P TYN+ M+ A +++ + R M + +V P+ +Y
Sbjct: 174 TEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYS 233
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR-E 311
+A + A L+ AE ++ +E T +++ L+ LYG LG E+ R+W ++R
Sbjct: 234 NMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLA 293
Query: 312 LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
+P +Y+ I+ ++ L AE ++ E ++ + N ++ Y + G+I KA
Sbjct: 294 IPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKA 353
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWL-- 429
L + G K NA T+ +KSG +AL+ + K + I K + WL
Sbjct: 354 NELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALEC--MSKAVSIGK--GDGGKWLPS 409
Query: 430 -ETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKLLRRM 488
ET +++ F +K DV E L E L ++ LI+ YA A P + RR+
Sbjct: 410 PETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRL 469
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 209/436 (47%), Gaps = 18/436 (4%)
Query: 57 VGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLV 116
V L W+++G + +V AI+ LRK K L++ EW+ + E +Y+ +
Sbjct: 157 VKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQL 216
Query: 117 EFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPIS 176
+ K+H + E +P + E++Y L+ C+ K + + + +M+EL +P S
Sbjct: 217 DLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTS 276
Query: 177 HLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFF 236
N+L++L+S +K + +L M+ + + P +TY+ L+ + ++ + +
Sbjct: 277 VFACNQLLLLYSMHDRKK--ISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIV 334
Query: 237 SLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVE-KSMTGNNWSTLDVLLILYGY 295
+K +E + ILA + A L A+ ++ +E K + W LL LY
Sbjct: 335 ETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPW-VCRSLLPLYAD 393
Query: 296 LGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQF 355
+G+ + R+ + + P R + + AI+A+G++ +E AE ++ + + + +
Sbjct: 394 IGDSDNVRRLSRFVDQNP--RYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPY 451
Query: 356 NSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGK- 414
++M +Y ++ ++ K L K M G T+ L +K+G E+GK
Sbjct: 452 FALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAG---------EVGKA 502
Query: 415 RLPINKRVRNST--PWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIK 472
L +N+ +++ P T ++I+E +A++GDV N EK+F ++ ++ Y Y T++
Sbjct: 503 ELILNRATKDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLL 562
Query: 473 AYAKAKIYDPKLLRRM 488
AY AK ++ RM
Sbjct: 563 AYINAKTPAYGMIERM 578
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 200/423 (47%), Gaps = 19/423 (4%)
Query: 61 LRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTT 120
+R W +G VR ++ + LRK+K K ALE+ EW++ + + + DY+ ++ +
Sbjct: 81 IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLIS 140
Query: 121 KLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVF 180
K+ G++ EK F +P + + +L+ + + + + ++M E G+ S L +
Sbjct: 141 KIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPY 200
Query: 181 NRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMK 240
N ++ ++ S + +P L+ ++K + +P + TYN+ + A+ +++E + + K
Sbjct: 201 NHMLSMYISRG-QFEKVPVLIKELKI-RTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAK 258
Query: 241 LRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRK 300
++ P+ ++Y +L +A A ++ +EK ++ N L+ L+ LG++
Sbjct: 259 EEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKD 318
Query: 301 ELERVWSNIR-ELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMM 359
+ W ++ + Y+ I A ++G E+A+ ++ E ES G N ++
Sbjct: 319 GVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLIL 378
Query: 360 TVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQAL----KTLELGKR 415
Y + + Y+ + G + T+ L LK E+ L K ++ K+
Sbjct: 379 AEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKK 438
Query: 416 LPINKR-VRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY 474
+N R V+ + LE E+G+V+ EKL L K+ Y T +YN+L++ Y
Sbjct: 439 WTVNVRLVKGACKELE----------EQGNVKGAEKLMTLLQKAGYVN-TQLYNSLLRTY 487
Query: 475 AKA 477
AKA
Sbjct: 488 AKA 490
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 205/454 (45%), Gaps = 12/454 (2%)
Query: 33 CTESTQQTQDNLCRRIEKLPKGEPVGS---ALRSWMRDGFPVRSNDVFHAINRLRKLKMN 89
T S D L RR+ + G+P S L W+ G V+++++ I LRK
Sbjct: 29 TTPSPLDPYDTLQRRVAR--SGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRF 86
Query: 90 KRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLV 149
AL++ +W+ R + E D + ++ K+ G+ EK F +P E +N LY L+
Sbjct: 87 SHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALL 146
Query: 150 IACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKV 209
K V+ + + + M+ELG+ L +N ++ L+ + M+ KLL +M+ + V
Sbjct: 147 NCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTG-KYTMVEKLLREMEDETV 205
Query: 210 TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQ-VEPNEISYCILAYAHAVARLNTAAE 268
P + T N + + ++E + +F + Q + + +Y A + A L A
Sbjct: 206 KPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKAL 265
Query: 269 TYVEAVEKSMTGNNWS-TLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAF 327
+ E+ + +VL+ YG G ++E+ R+WS +EL Y+ I A
Sbjct: 266 EMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISAL 325
Query: 328 GRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANA 387
++ +E E+I E E+ L + + ++T YCK G+++KA + + +
Sbjct: 326 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 385
Query: 388 ITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVEN 447
T+ +LALG +G E+A++ + + + ++K P +S V+ + D+E
Sbjct: 386 STWERLALGYKMAGKMEKAVEKWK--RAIEVSK--PGWRPHQVVLMSCVDYLEGQRDMEG 441
Query: 448 VEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
+ K+ L + + Y + + A KI D
Sbjct: 442 LRKILRLLSERGHISYDQLLYDMNGAGLSWKIVD 475
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 185/409 (45%), Gaps = 15/409 (3%)
Query: 57 VGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVI-RERPYRPRELDYSYL 115
S L W + G + ++ + LRK K +ALEV +W+ R +R D +
Sbjct: 83 AASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASDAAIQ 142
Query: 116 VEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPI 175
++ K+ GI E+ F ++P F++ +Y +L+ A + + + MR+ GY +
Sbjct: 143 LDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYAL 202
Query: 176 SHLVFNRLIILHSSPSLRK-NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMR 234
L FN ++ L+ + LR+ + + ++ +MK + + +YNI + + ++E +
Sbjct: 203 HPLPFNVMMTLYMN--LREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMEL 260
Query: 235 FFSLMKLR-QVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILY 293
+ MK + PN ++ +A + AE + VE +TG N LL LY
Sbjct: 261 VYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLY 320
Query: 294 GYLGNRKELERVWSNIRE-LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSV 352
G LGN+KEL RVW + +P + Y + + R+G +E AE+++ E K
Sbjct: 321 GSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDP 380
Query: 353 EQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLEL 412
N +M Y K+ ++ A L+ +M G K ++ T+ LA+G + +AL L
Sbjct: 381 RIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRN 440
Query: 413 GKRLPINKRVRNSTPWLETTLSIVEIFA---EKGDVENVEKLFEELHKS 458
S+ W L + F E+ DV + E + E L +S
Sbjct: 441 A------FSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQS 483
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 150/308 (48%), Gaps = 10/308 (3%)
Query: 39 QTQDNLCRRI--EKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVM 96
+ +D+L RI +LPK + L W+ +G + N++ LR+ + K ALEV
Sbjct: 52 EEKDDLKSRIFRLRLPK-RSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVT 110
Query: 97 EWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIA-CLDK 155
EW+++ + + DY+ ++ +K+ GI E+ F + + + Y +L+ A K
Sbjct: 111 EWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASK 170
Query: 156 GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVST 215
R + + + + +N ++ L+ S + +P+++ +K KV+P + T
Sbjct: 171 QTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVG-QVEKVPEVIEVLKQKKVSPDIFT 229
Query: 216 YNILMKIEANEHNLENLMRFFSLMKLRQVEPNE--ISYCILAYAHA-VARLNTAAETYVE 272
YN+ + A N++ L + M+ NE + Y L + +R+ A T
Sbjct: 230 YNLWLSSCAATFNIDELRKILEEMR-HDASSNEGWVRYIDLTSIYINSSRVTNAESTLPV 288
Query: 273 AVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL-PFVRTKSYMLAIEAFGRIG 331
EKS++ W T D L+IL+ LGN+ ++++W ++R + ++SY+ + ++ +G
Sbjct: 289 EAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLG 348
Query: 332 HLERAEEI 339
HL AEEI
Sbjct: 349 HLREAEEI 356
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 195/442 (44%), Gaps = 19/442 (4%)
Query: 54 GEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYS 113
G + L ++ +G PV+ +D+ LRK + +RALE+ EW+ R+ D++
Sbjct: 53 GGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAFTGS-DHA 111
Query: 114 YLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLV-IACLDKGVIRLSLEYMKRMRELG 172
+ K G+ E F + +N+ Y +L+ C++K ++ + + M +L
Sbjct: 112 IRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHF-ENMVDLN 170
Query: 173 YPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENL 232
+ + L FN L+ ++ + +P L+ MK +TP TY++ ++ + +L+ +
Sbjct: 171 HVSNSLPFNNLMAMYMGLG-QPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGV 229
Query: 233 MRFFSLMKLRQVEPNEI----SYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDV 288
+ MK E I ++ LA + L AE ++++E +M +
Sbjct: 230 EKVLDEMK---AEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHF 286
Query: 289 LLILYGYLGNRKELERVWSNIRE-LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAK 347
L+ LY + N E+ RVW +++ P V SY+ + A ++ ++ ++++ E ES
Sbjct: 287 LINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTC 346
Query: 348 GLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ-LALGCLKSGMEEQA 406
+ N ++ Y K + ++A ++ N CK RQ L + LK+ + A
Sbjct: 347 WTYDMRMANVAISSYLKQNMYEEAEAVF-NGAMKKCKGQFSKARQLLMMHLLKNDQADLA 405
Query: 407 LKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFV 466
LK E + + +N T E S F E DV+ E+ + L K +
Sbjct: 406 LKHFEAA----VLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLS-SET 460
Query: 467 YNTLIKAYAKAKIYDPKLLRRM 488
Y L+K Y A P + +R+
Sbjct: 461 YTLLMKTYLAAGKACPDMKKRL 482
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 200/445 (44%), Gaps = 21/445 (4%)
Query: 54 GEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYS 113
G V L ++ +G VR +D+F LRK + + A E+ +W + +R D++
Sbjct: 84 GGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDW-MEKRKMTFSVSDHA 142
Query: 114 YLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKR----MR 169
++ K G+ E F + +N ++ C + L E K M
Sbjct: 143 ICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCY---CVELEEEKAKAHFEIMD 199
Query: 170 ELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNL 229
EL + + L FN ++ ++ S + +P L+ MK ++P TY+I M+ + ++L
Sbjct: 200 ELNFVNNSLPFNNMMSMYMRLS-QPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDL 258
Query: 230 ENLMRFFSLM-KLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDV 288
+ L + M K + + ++ LA + A L A++ ++++E+ M NN +
Sbjct: 259 DGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHF 318
Query: 289 LLILYGYLGNRKELERVWSNIREL-PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAK 347
L+ LY + E+ RVW ++++ P V SY++ ++A ++G L+ ++I+ E ES
Sbjct: 319 LMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKC 378
Query: 348 GLKSVEQFNSMMTVYCKHGVIDKAARLYKNM--KANGCKANAITYRQ-LALGCLKSGMEE 404
+ N + Y K + ++A ++ K+ G + A RQ L + L++ +
Sbjct: 379 WAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKA---RQLLMIHLLENDKAD 435
Query: 405 QALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKG-DVENVEKLFEELHKSKYCRY 463
A+K LE + + ++ W +S+ + EK DV+ E + L K
Sbjct: 436 LAMKHLEAA--VSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLD- 492
Query: 464 TFVYNTLIKAYAKAKIYDPKLLRRM 488
+ LIK YA A+ P + R+
Sbjct: 493 SETMTFLIKTYAAAEKTSPDMRERL 517
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 186/409 (45%), Gaps = 8/409 (1%)
Query: 52 PKGEPVGSA---LRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPR 108
P G+P S L++W++ G V ++ ++ LR+ K ALEV +W+
Sbjct: 33 PLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFS 92
Query: 109 ELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRM 168
+++ ++ +++G E+ F + +++N+ Y L+ + + + SL + ++M
Sbjct: 93 PTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKM 152
Query: 169 RELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHN 228
+E+G+ S L +N ++ L+++ + +PK+L +MK + V P +Y I + ++
Sbjct: 153 KEMGFVTSSLTYNNIMCLYTNIG-QHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYD 211
Query: 229 LENLMRFFSLMKLRQ-VEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLD 287
LE + M+ RQ + + +Y + A + A ++ E + + +
Sbjct: 212 LERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYN 271
Query: 288 VLLILYGYLGNRKELERVWSNIRELPFVR-TKSYMLAIEAFGRIGHLERAEEIWLEMESA 346
L+ LY LG + E+ R+W +++ R + Y+ +++ +I L AEE+ E +S+
Sbjct: 272 HLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSS 331
Query: 347 KGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA 406
N+++ Y + +KA + +++ G ++ +A + G E A
Sbjct: 332 GNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENA 391
Query: 407 LKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEEL 455
K ++ L + R P L S++ ++G ++ VE L
Sbjct: 392 FKCMKTA--LGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASL 438
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 172/382 (45%), Gaps = 7/382 (1%)
Query: 103 RPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSL 162
R + E D + ++ K+ G+ EK F +P E +N LY L+ K V+ +
Sbjct: 5 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 64
Query: 163 EYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKI 222
+ + M+ELG+ L +N ++ L+ + M+ KLL +M+ + V P + T N +
Sbjct: 65 QVFQEMKELGFLKGCLPYNVMLNLYVRTG-KYTMVEKLLREMEDETVKPDIFTVNTRLHA 123
Query: 223 EANEHNLENLMRFFSLMKLRQ-VEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGN 281
+ ++E + +F + Q + + +Y A + A L A + E+ +
Sbjct: 124 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 183
Query: 282 NWS-TLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIW 340
+VL+ YG G ++E+ R+WS +EL Y+ I A ++ +E E+I
Sbjct: 184 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIM 243
Query: 341 LEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKS 400
E E+ L + + ++T YCK G+++KA + + + T+ +LALG +
Sbjct: 244 EEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMA 303
Query: 401 GMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKY 460
G E+A++ + + + ++K P +S V+ + D+E + K+ L + +
Sbjct: 304 GKMEKAVEKWK--RAIEVSK--PGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGH 359
Query: 461 CRYTFVYNTLIKAYAKAKIYDP 482
Y + + A KI D
Sbjct: 360 ISYDQLLYDMNGAGLSWKIVDA 381
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 189/449 (42%), Gaps = 32/449 (7%)
Query: 65 MRDGFPVRSNDVFHA-----------INRLRKLKMNKRALEVMEWVIRERPYRPRELDYS 113
+ +GF N V+H I +L ++A +++E ++ P + Y+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE-ILEGSGAVPDVITYN 176
Query: 114 YLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGY 173
++ K I++ + R+ S + + YN ++ + D G ++ ++E + RM +
Sbjct: 177 VMISGYCKAGEINNALSVLDRM-SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 174 PISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLM 233
+ + LI S + M KLL +M+ TP V TYN+L+ E L+ +
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAM-KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 234 RFFSLMKLRQVEPNEISY-CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLIL 292
+F + M +PN I++ IL + R A + + + K + ++ IL
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS----PSVVTFNIL 350
Query: 293 YGYLGNRKELERVWSNIRELPFVRTK----SYMLAIEAFGRIGHLERAEEIWLEMESAKG 348
+L + L R + ++P + SY + F + ++RA E M S
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 349 LKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
+ +N+M+T CK G ++ A + + + GC ITY + G K+G +A+K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 409 TLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYN 468
L+ R ++ P T S+V + +G V+ K F E + +N
Sbjct: 471 LLD-------EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 469 TLIKAYAKAKIYDPKL--LRRMILGGARP 495
+++ K++ D + L MI G +P
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 140/360 (38%), Gaps = 42/360 (11%)
Query: 90 KRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFT--RVPSEFQNELLYNN 147
K+A+EV++ +++ Y P + Y+ L+E T + G+ H KL R + + YN
Sbjct: 221 KQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 148 LVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNM-MPKLLTQMKA 206
LV +G + +++++ M G + + N IIL S S + M KLL M
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN--IILRSMCSTGRWMDAEKLLADMLR 337
Query: 207 DKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTA 266
+P V T+NIL+ + L + M +PN +SY L + +
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 267 AETYVE-----------------------------AVEKSMTGNNWSTLDVLLILYGYLG 297
A Y+E AVE ++ VL+ +
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 298 NRKELERVWSNIRELPFVRTK-------SYMLAIEAFGRIGHLERAEEIWLEMESAKGLK 350
+ + I+ L +R K +Y + R G ++ A + + E E
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 351 SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL 410
+ FNS+M CK D+A M GCK N +Y L G GM ++AL+ L
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 186/429 (43%), Gaps = 31/429 (7%)
Query: 62 RSWMRDGFPVRSNDVFHAIN--RLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFT 119
R W+R V D+ ++ RLR +K+N A+++ +++ RP+ P +D++ L+
Sbjct: 38 RCWVRASSSVSGGDLRERLSKTRLRDIKLND-AIDLFSDMVKSRPF-PSIVDFNRLLSAI 95
Query: 120 TKLHG----ISHGEKLFTRVPSEFQNELLYNNLVIACLDKGV-IRLSLEYMKRMRELGYP 174
KL IS G+K+ +N+L N+VI C + L+L + +M +LGY
Sbjct: 96 VKLKKYDVVISLGKKMEVL---GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYE 152
Query: 175 ISHLVFNRLIILHSSPSLRKNMMPK---LLTQMKADKVTPHVSTYNILMKIEANEHNLEN 231
+ L+ + R+N + L+ +M P + YN ++ + +
Sbjct: 153 PDRVTIGSLV----NGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 232 LMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAETYVEAVEKSMTGN--NWSTLDV 288
FF ++ + + PN ++Y L +R + AA + ++K +T N +S L
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 289 LLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKG 348
+ G + KEL + P + T S + I ++ A +++ M S
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL--INGLCLHDRIDEANQMFDLMVSKGC 326
Query: 349 LKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
L V +N+++ +CK ++ +L++ M G +N +TY L G ++G ++A +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 409 TLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYN 468
I +P + T ++ + G++E +FE++ K + Y
Sbjct: 387 FFSQMDFFGI-------SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 469 TLIKAYAKA 477
T+I+ K
Sbjct: 440 TVIRGMCKT 448
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 6/269 (2%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
YN L+ C + + + + + M+ G+ + +N L+ ++ K M K+L +M
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM-KVLNEM 340
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLN 264
+ +P + TYN L+ A + L+ M + M + +P+ +Y L A
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 265 TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYM 321
+A + E + + N T + + +YG G E+ +++ I P + T + +
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 322 LAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKAN 381
LA+ FG+ G ++ EM+ A + E FN++++ Y + G ++A +Y+ M
Sbjct: 461 LAV--FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 382 GCKANAITYRQLALGCLKSGMEEQALKTL 410
G + TY + + GM EQ+ K L
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 176/424 (41%), Gaps = 54/424 (12%)
Query: 83 LRKLKMNKR---ALEVMEWVIRERPYRPRELDYSY---LVEFTTKLHGISHGEKLFTRVP 136
L+ L +K+ AL +W ++++ Y+ LD S ++ K +S +F +
Sbjct: 142 LKGLGFHKKFDLALRAFDWFMKQKDYQSM-LDNSVVAIIISMLGKEGRVSSAANMFNGLQ 200
Query: 137 SE-FQNELL-YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK 194
+ F ++ Y +L+ A + G R ++ K+M E G + + +N ++ +
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 195 NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCIL 254
N + L+ +MK+D + P TYN L+ + + F MK ++++Y
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY--- 317
Query: 255 AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF 314
+ LL +YG KE +V + + F
Sbjct: 318 --------------------------------NALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 315 VRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
+ +Y I A+ R G L+ A E+ +M V + ++++ + + G ++ A
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL 433
+++ M+ GCK N T+ G + +K + IN V +P + T
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD-----EIN--VCGLSPDIVTWN 458
Query: 434 SIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKLL--RRMILG 491
+++ +F + G V +F+E+ ++ + +NTLI AY++ ++ + RRM+
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 492 GARP 495
G P
Sbjct: 519 GVTP 522
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 50/336 (14%)
Query: 165 MKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEA 224
K M+ G+ FN LI +S + M + +M VTP +STYN ++ A
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAM-TVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 225 NEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWS 284
E + + M+ + +PNE++YC L +A+A + + E V +
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 285 TLDVLLILYGYLGNRKELERVWSNIRE---LPFVRTKSYMLAIEAFGRIGHLERAEEIWL 341
L L+++ E ER +S ++E P + T + M++I +GR + +A +
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI--YGRRQMVAKANGVLD 653
Query: 342 EMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSG 401
M+ S+ +NS+M ++ + K+ + + + A G K + I+Y + +
Sbjct: 654 YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR-- 711
Query: 402 MEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYC 461
N R+R+++ ++F E+ S
Sbjct: 712 -----------------NTRMRDAS-----------------------RIFSEMRNSGIV 731
Query: 462 RYTFVYNTLIKAYAKAKIYDPKL--LRRMILGGARP 495
YNT I +YA +++ + +R MI G RP
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 187/425 (44%), Gaps = 19/425 (4%)
Query: 9 QARFVEAIRRTVGGIESHVHFRFLCTESTQQTQDNLCRR--IEKLPKGEPVGSALRSWMR 66
AR R T G I S R L + + ++ + R + ++ EP+ L +++
Sbjct: 37 DARRSTRTRITCGAISSR---RKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVK 93
Query: 67 DGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGIS 126
VR + F L K + LEV W+ ++R Y P YS L+ K
Sbjct: 94 ---VVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTR 150
Query: 127 HGEKLFTRVPSEF--QNELLYNNLVIACLDKGVIRLSLE----YMKRMRELGYPISHLVF 180
LF+ + + + +YN L+ A L +LE Y+ +M+ + ++V
Sbjct: 151 MAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVT 210
Query: 181 NRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMK 240
+++ + S + + + L + V+P V T+N +M ++ + + M+
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 241 LRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRK 300
+ +P+ I++ +L ++ + E +++ +S T + ++I YG
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 301 ELERVWSNIRELPFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMM 359
+ E V+ + ++ ++ + +Y I +G G + RA EI+ E+ + + N+M+
Sbjct: 331 KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 360 TVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA---LKTLELGKRL 416
VYC++G+ +A +L+ N A +A TY+ L K+ M+EQ +K +E +
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Query: 417 PINKR 421
P NKR
Sbjct: 451 P-NKR 454
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 23/308 (7%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHN------LENLMRFFSLMK-LRQVEPNEISYC 252
L ++MK P S YN L I A+ H LE + + MK + + +PN ++Y
Sbjct: 155 LFSEMKNSGCRPDASVYNAL--ITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYN 212
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE- 311
IL A A + + ++ S + T + ++ YG G KE+E V + +R
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 312 --LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVID 369
P + T + + I+++G+ E+ E+ + + +K ++ FNSM+ Y K +ID
Sbjct: 273 ECKPDIIT--FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 370 KAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWL 429
KA ++K M + ITY + + G +A + E + + RV ++
Sbjct: 331 KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE---EVGESDRVLKAS--- 384
Query: 430 ETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPK--LLRR 487
T +++E++ G +KLF + Y L KAY KA + + L+++
Sbjct: 385 -TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 488 MILGGARP 495
M G P
Sbjct: 444 MEKDGIVP 451
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 149/358 (41%), Gaps = 45/358 (12%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKL 200
NE +Y ++ +G++ LE M G S + LI + R +L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG-RYETSLEL 198
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEH-NLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L +MK +K++P + TYN ++ A + E L+ F+ M+ ++P+ ++Y L A A
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS 319
+ L AE R ++ +P + T S
Sbjct: 259 IRGLGDEAEMVF--------------------------------RTMNDGGIVPDLTTYS 286
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
++ +E FG++ LE+ ++ EM S L + +N ++ Y K G I +A ++ M+
Sbjct: 287 HL--VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIF 439
A GC NA TY L +SG + ++L + + N+ P T ++E+F
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDV-------RQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 440 AEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
E G + V LF ++ + Y +I A K +++ K+L+ M P
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 158/385 (41%), Gaps = 50/385 (12%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK-NMMPKLLTQ 203
YN L+ AC +G+ + + M + G ++ L+ + LR+ + LL +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV--ETFGKLRRLEKVCDLLGE 307
Query: 204 MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VAR 262
M + P +++YN+L++ A +++ M F M+ PN +Y +L R
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 263 LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRT-- 317
+ + ++E ++ S T + +T ++L+ ++G G KE+ ++ ++ E P + T
Sbjct: 368 YDDVRQLFLE-MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 318 -------------------------------KSYMLAIEAFGRIGHLERAEEIWLEMESA 346
K+Y IEAFG+ E A + M
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 347 KGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA 406
S+E F+S++ + + G++ ++ + + +G N T+ + G E+A
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 407 LKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFV 466
+KT ++ P T +++ +++ V+ + FEE+ S
Sbjct: 547 VKTY-------VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMC 599
Query: 467 YNTLIKAYAKAKIYDP--KLLRRMI 489
Y ++ Y K + +D +LL M+
Sbjct: 600 YCMMLAVYGKTERWDDVNELLEEML 624
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 187/425 (44%), Gaps = 19/425 (4%)
Query: 9 QARFVEAIRRTVGGIESHVHFRFLCTESTQQTQDNLCRR--IEKLPKGEPVGSALRSWMR 66
AR R T G I S R L + + ++ + R + ++ EP+ L +++
Sbjct: 37 DARRSTRTRITCGAISSR---RKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVK 93
Query: 67 DGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGIS 126
VR + F L K + LEV W+ ++R Y P YS L+ K
Sbjct: 94 ---VVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTR 150
Query: 127 HGEKLFTRVPSEF--QNELLYNNLVIACLDKGVIRLSLE----YMKRMRELGYPISHLVF 180
LF+ + + + +YN L+ A L +LE Y+ +M+ + ++V
Sbjct: 151 MAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVT 210
Query: 181 NRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMK 240
+++ + S + + + L + V+P V T+N +M ++ + + M+
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 241 LRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRK 300
+ +P+ I++ +L ++ + E +++ +S T + ++I YG
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 301 ELERVWSNIRELPFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMM 359
+ E V+ + ++ ++ + +Y I +G G + RA EI+ E+ + + N+M+
Sbjct: 331 KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 360 TVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA---LKTLELGKRL 416
VYC++G+ +A +L+ N A +A TY+ L K+ M+EQ +K +E +
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Query: 417 PINKR 421
P NKR
Sbjct: 451 P-NKR 454
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 23/308 (7%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHN------LENLMRFFSLMK-LRQVEPNEISYC 252
L ++MK P S YN L I A+ H LE + + MK + + +PN ++Y
Sbjct: 155 LFSEMKNSGCRPDASVYNAL--ITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYN 212
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE- 311
IL A A + + ++ S + T + ++ YG G KE+E V + +R
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 312 --LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVID 369
P + T + + I+++G+ E+ E+ + + +K ++ FNSM+ Y K +ID
Sbjct: 273 ECKPDIIT--FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 370 KAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWL 429
KA ++K M + ITY + + G +A + E + + RV ++
Sbjct: 331 KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE---EVGESDRVLKAS--- 384
Query: 430 ETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPK--LLRR 487
T +++E++ G +KLF + Y L KAY KA + + L+++
Sbjct: 385 -TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 488 MILGGARP 495
M G P
Sbjct: 444 MEKDGIVP 451
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 151/336 (44%), Gaps = 20/336 (5%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
YN ++ G I+ + E KRM E G + + FN +I ++ + + ++ + M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN----NGQLGEVTSLM 356
Query: 205 KADKV--TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR 262
K K+ P TYNIL+ + +++E +F MK ++P+ +SY L YA ++
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 263 LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF---VRTKS 319
+ AE + ++ + T L +Y + LE+ WS + + ++
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMY---VEAEMLEKSWSWFKRFHVAGNMSSEG 473
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y I+A+G G+L AE +++ + ++V ++N M+ Y +KA L+++M
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNK-RTVIEYNVMIKAYGISKSCEKACELFESMM 532
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIF 439
+ G + TY L + M + LE ++ V + P+ +++ F
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLE---KMRETGYVSDCIPY----CAVISSF 585
Query: 440 AEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA 475
+ G + E++++E+ + VY LI A+A
Sbjct: 586 VKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 179/419 (42%), Gaps = 62/419 (14%)
Query: 90 KRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRV-PSEFQNELLYNNL 148
+RALEV EW+ + P + ++ + + S ++FTR P+ +YN +
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAM 231
Query: 149 VIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILH-SSPSLRKNMMPKLLTQMKAD 207
+ G + E + MR+ G + FN LI S L N+ +LL ++
Sbjct: 232 MGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNS 291
Query: 208 KVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAA 267
+ P TYN L+ + + NL+ ++ F M+ + +P+ +Y
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTY---------------- 335
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP--FVRTKSYMLAIE 325
+ ++ +YG G E ER++ + EL F +Y +
Sbjct: 336 -------------------NAMISVYGRCGLAAEAERLFMEL-ELKGFFPDAVTYNSLLY 375
Query: 326 AFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKA-NGCK 384
AF R + E+ +E++ +M+ K +N+++ +Y K G +D A +LYK+MK +G
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 385 ANAITYRQL--ALGCLKSGMEEQALKT--LELGKRLPINKRVRNSTPWLETTLSIVEIFA 440
+AITY L +LG +E AL + L++G + P L+T +++ +A
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK-----------PTLQTYSALICGYA 484
Query: 441 EKGDVENVEKLFEELHKS----KYCRYTFVYNTLIKAYAKAKIYDPKLLRRMILGGARP 495
+ G E E F + +S Y+ + + L++ K + L R MI G P
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW--GLYRDMISDGHTP 541
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 24/296 (8%)
Query: 210 TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAE 268
TP + T+N LM A E F+ M P S IL +A V RL E
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLE---E 840
Query: 269 TYVEAVEKSMTGNNWSTLDVLLIL--YGYLGNRKELERVWSNIRELPFVRT-KSYMLAIE 325
YV E G S +LL+L + GN E+++++S+++ ++ T + Y + IE
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 326 AFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKA 385
+ + AE + EME A + +NSM+ +Y K ++Y+ +K G +
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 386 NAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDV 445
+ TY L + + E+ ++ + L ++ P L+T S++ F ++ +
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD-------PKLDTYKSLISAFGKQKCL 1013
Query: 446 ENVEKLFEELHKSKYCRYTFVYNTLIK------AYAKAKIYDPKLLRRMILGGARP 495
E E+LFEEL Y+T++K + +KA+ KLL+ M G P
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE----KLLQMMKNAGIEP 1065
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 188/419 (44%), Gaps = 15/419 (3%)
Query: 49 EKLPKGEP---VGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPY 105
E L K P V S L+ + G V +++ RL + AL++MEW+ ++
Sbjct: 43 EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDI 102
Query: 106 RPRELDYSYLVEFTTKLHGISHGEKLFTRV----PSEFQNELLYNNLVIACLDKGVIRLS 161
D + ++ K HG+ GE+ F ++ S + Y L+ A + +++ +
Sbjct: 103 EFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEA 162
Query: 162 LEYMKRMRELGYPISHLVFNRLIILH-SSPSLRKNMMPKLLTQMKADKVTPHVSTYNILM 220
M+++ LG+ ++ FN ++ L+ +S K +M +++ MK +K+ +V +YN+ M
Sbjct: 163 EALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVM--VVSMMKGNKIPRNVLSYNLWM 220
Query: 221 KIEANEHNLENLMRFF-SLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMT 279
+ + + ++ + VE S C LA + + + A +E EK +
Sbjct: 221 NACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN 280
Query: 280 GNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIGHLERAEE 338
+N L+ LY LGN++ + R+W + + + +Y+ + + + G LE AE
Sbjct: 281 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 340
Query: 339 IWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCL 398
++ E E+ V N ++ Y ++G I KA L+ + G N T+ L G +
Sbjct: 341 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 400
Query: 399 KSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHK 457
K E+A+ + ++ + R + P ++I E F ++ +E +LH+
Sbjct: 401 KCENMEKAIDAMH---QVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHR 456
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 115 LVEFTTKLHGISHGEKLFTRVPSEFQ--------NELLYNNLVIACLDKGVIRLSLEYMK 166
+V F + L+G G++++ + Q N ++YN ++ + +L+ +
Sbjct: 151 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 167 RMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANE 226
RM + G + +N LI S S R + ++++ M ++ P V T+N L+ E
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCS-SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 227 HNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSMTGNNWST 285
+ F+ M R ++P+ ++Y +L Y + +RL+ A E + V K G
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK---GCFPDV 326
Query: 286 LDVLLILYGYLGNRK--ELERVWSNIRELPFVR-TKSYMLAIEAFGRIGHLERAEEIWLE 342
+ +++ GY ++K +++ + + VR T +Y + I+ + R G L AEEI+
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 343 MESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSG 401
M ++ +N ++ C +G I+KA + +M+ NG A+ +TY + G K+G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 6/253 (2%)
Query: 161 SLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILM 220
+L +M +GY + +++N +I N + LL +M+ D + P V TYN L+
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL-DLLNRMEKDGIGPDVVTYNSLI 228
Query: 221 KIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSMT 279
+ + R S M R++ P+ ++ L A R++ A E Y E + +S+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 280 GN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAE 337
+ +S L L +Y L +E+ + P V T Y + I + + +E
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT--YSILINGYCKSKKVEHGM 346
Query: 338 EIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGC 397
+++ EM +++ + ++ YC+ G ++ A +++ M G N ITY L G
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 398 LKSGMEEQALKTL 410
+G E+AL L
Sbjct: 407 CDNGKIEKALVIL 419
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 175/415 (42%), Gaps = 17/415 (4%)
Query: 74 NDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFT 133
NDV + + ++ N+ A V +IR + P ++ Y YL+ K+ + + LF
Sbjct: 291 NDVILGLCKFDRI--NEAAKMVNRMLIRG--FAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 134 RVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRM-RELGYPISHLVFNRLIILHSSPSL 192
R+P +++N L+ + G + + + M G +N LI + L
Sbjct: 347 RIPK--PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY- 251
+ ++L M+ P+V +Y IL+ ++ + M ++PN + +
Sbjct: 405 -VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 252 CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE 311
C+++ R+ A E + E K + ++ ++ L + L + I E
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 312 LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
T +Y I AF R G ++ A ++ EM +NS++ C+ G +DKA
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLET 431
L++ M +G + I+ L G +SGM E+A +E K + + R STP + T
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA---VEFQKEMVL----RGSTPDIVT 636
Query: 432 TLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK-IYDPKLL 485
S++ G +E+ +F +L T +NTL+ K +YD LL
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLIILHS-SPSLRKNMMPKLLTQMKADKVTPHVSTY 216
I +L ++ M + G + +++ LI HS S R N +LL +M P T+
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLI--HSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 217 NILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-------CILAYAHAVARL------ 263
N ++ + + + M +R P++I+Y C + A L
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 264 ------NTAAETYV--------EAVEKSMTGNNWSTLDVLL---ILYGY-----LGNRKE 301
NT +V +AV M + DV ++YGY +G E
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 302 LERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMT 360
+ N P V SY + ++ F ++G ++ A + EM SA GLK + FN +++
Sbjct: 411 VLHDMRNKGCKPNVY--SYTILVDGFCKLGKIDEAYNVLNEM-SADGLKPNTVGFNCLIS 467
Query: 361 VYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINK 420
+CK I +A +++ M GCK + T+ L G + + AL L R I++
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL----RDMISE 523
Query: 421 RVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
V +T T ++ F +G+++ KL E+ YN+LIK +A
Sbjct: 524 GVVANTVTYNT---LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 481 DP--KLLRRMILGGARP 495
D L +M+ G P
Sbjct: 581 DKARSLFEKMLRDGHAP 597
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 161/398 (40%), Gaps = 61/398 (15%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKN----MMPKL 200
YN L+ G I+ ++E + M + G P + + FN L L KN + K+
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF-----DCLCKNDEVTLALKM 630
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCIL------ 254
L +M P V TYN ++ ++ M FF MK + V P+ ++ C L
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVK 689
Query: 255 ------AYAHAVARLNTAAETYVEAVEKSMTG--------NNWSTLDVLLILYGYL---- 296
AY L A+ + + G +N + L+ G
Sbjct: 690 ASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGD 749
Query: 297 -----------------GNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEI 339
G R E+ ++ P + +Y L I +E A+++
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP--KLPTYNLLIGGLLEADMIEIAQDV 807
Query: 340 WLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLK 399
+L+++S + V +N ++ Y K G ID+ LYK M + C+AN IT+ + G +K
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 400 SGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSK 459
+G + A L+L L + R+ +P T +++ ++ G + ++LFE +
Sbjct: 868 AGNVDDA---LDLYYDLMSD---RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 460 YCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+YN LI + KA D L +RM+ G RP
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 124/302 (41%), Gaps = 20/302 (6%)
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA- 261
Q+K+ P V+TYN L+ ++ L + M + E N I++ I+ A
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Query: 262 RLNTAAETYVEAVEK---SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK 318
++ A + Y + + S T + L L G L K+L + P
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP--NCA 927
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
Y + I FG+ G + A ++ M ++ ++ ++ C G +D+ +K +
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTL-ELGKRLPINKRVRNSTPWLETTLSIVE 437
K +G + + Y + G KS E+AL E+ K R TP L T S++
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM-------KTSRGITPDLYTYNSLIL 1040
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPK----LLRRMILGGA 493
G VE K++ E+ ++ F +N LI+ Y+ + P+ + + M+ GG
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG--KPEHAYAVYQTMVTGGF 1098
Query: 494 RP 495
P
Sbjct: 1099 SP 1100
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
L M+ + P++ TYN L+ H L++ + F M+ V+P +Y + +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 261 ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RTKS 319
+ + +A E ++ N + L G +E ++++ ++++ V + +
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y + ++ + ++G ++ A ++ EM V NS++ K +D+A +++ MK
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLE--LGKRLPINKRVRNSTPWLETTLSIVE 437
K +TY L G K+G ++A++ E + K P N N ++ +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN---------TLFD 616
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ +V K+ ++ F YNT+I K
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 149/384 (38%), Gaps = 56/384 (14%)
Query: 155 KGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
KG ++ + +++MRE G+ ++ +N LI L M ++ +M + P +
Sbjct: 166 KGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM-EVYRRMILEGFRPSLQ 224
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY--CILAYAHAVARLNTAAETYVE 272
TY+ LM +++++M M+ ++PN ++ CI A ++N A E ++
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA-GKINEAYEI-LK 282
Query: 273 AVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK----SYMLAIEAFG 328
++ G + T VL+ L ++L+ ++ R K +Y+ ++ F
Sbjct: 283 RMDDEGCGPDVVTYTVLI---DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 329 RIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGV--------------------- 367
L+ ++ W EME + V F ++ CK G
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 368 --------------IDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELG 413
+D A L+ NM++ G K A TY KSG AL+T E
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE-- 457
Query: 414 KRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
+ + P + + + A+ G +++F L + YN ++K
Sbjct: 458 -----KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 474 YAKAKIYDP--KLLRRMILGGARP 495
Y+K D KLL M+ G P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEP 536
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 162/397 (40%), Gaps = 42/397 (10%)
Query: 116 VEFTTKLHGI------SHGEKLFTR-VPSEFQNELL-YNNLVIACLDKGVIRLSLEYMKR 167
V F T +HG+ S L R V Q +L Y +V +G I L+L +K+
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 168 MRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEH 227
M E G + +V II N L T+M + P+V TYN L++ N
Sbjct: 246 M-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 228 NLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSMTGN--NWS 284
+ R S M R++ PN +++ L A +L A + Y E +++S+ + +S
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 285 TLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEME 344
+L ++ L K + + + P V T Y I+ F + +E E++ EM
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLIKGFCKAKRVEEGMELFREMS 422
Query: 345 SAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEE 404
+ + +N+++ + G D A +++K M ++G + ITY L G K G E
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 405 QALKTLEL----------------------------GKRLPINKRVRNSTPWLETTLSIV 436
+AL E G L + ++ P + +++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 437 EIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
F KG E + LF E+ + + YNTLI+A
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 124/552 (22%), Positives = 226/552 (40%), Gaps = 98/552 (17%)
Query: 23 IESHVHFRFLCTESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINR 82
+ S VH + ++S + + L +R +L K P+ S LR F S D ++R
Sbjct: 1 MTSCVHLGIVASQSKKMS---LAKRFAQLRKASPLFS-LRGVY---FSAASYDYREKLSR 53
Query: 83 --LRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHG----ISHGEKLFT-RV 135
L LK++ A+++ +++ RP P ++++ L+ K++ IS GE++ R+
Sbjct: 54 NVLLDLKLDD-AVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRI 111
Query: 136 PSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYP------------------ISH 177
+ + YN L+ + + L+L + +M +LGY IS
Sbjct: 112 SYDLYS---YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 178 LV-----------------FNRLI---ILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
V FN LI LH+ S L+ +M A P + TY
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS----EAVALIDRMVARGCQPDLFTYG 224
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAETYVEAVEK 276
++ +++ + M+ ++E + + Y + A +N A + E K
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGRIGHL 333
+ N + ++ L Y G + R+ S++ E P V T S + I+AF + G L
Sbjct: 285 GIRPNVVTYNSLIRCLCNY-GRWSDASRLLSDMIERKINPNVVTFSAL--IDAFVKEGKL 341
Query: 334 ERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQL 393
AE+++ EM + ++S++ +C H +D+A +++ M + C N +TY L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 394 ALGCLKSGMEEQALKTL-ELGKRLPIN--------------------------KRVRNST 426
G K+ E+ ++ E+ +R + K V +
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 427 PWLETTLSI-VEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA-KIYDP-K 483
P T SI ++ + G +E +FE L KSK + YN +I+ KA K+ D
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 484 LLRRMILGGARP 495
L + L G +P
Sbjct: 522 LFCSLSLKGVKP 533
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 7/195 (3%)
Query: 211 PHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYA-HAVARLNTAAET 269
P+V TYN L+K +E M F M R + N ++Y L + A +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 270 YVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAF 327
+ + V + + +S L L YG L + + P + T Y + IE
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT--YNIMIEGM 510
Query: 328 GRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKAN 386
+ G +E +++ + S KG+K +V + +M++ +C+ G+ ++A L++ MK +G N
Sbjct: 511 CKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 387 AITYRQLALGCLKSG 401
+ TY L L+ G
Sbjct: 570 SGTYNTLIRARLRDG 584
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 187/434 (43%), Gaps = 35/434 (8%)
Query: 76 VFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRV 135
+ + R RKL + A M +I+ Y P + +S L+ +S +L R+
Sbjct: 113 MINCCCRCRKLSL---AFSAMGKIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 136 ------PSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSS 189
P+ L N L CL+ G + ++ + RM E G+ + + + ++ +
Sbjct: 169 VEMGHKPTLITLNALVNGL---CLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 190 PSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEI 249
S + + +LL +M+ K+ Y+I++ + +L+N F+ M+++ + + I
Sbjct: 225 -SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 250 SYCILAYAHAVA-RLNTAAETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVW 306
Y L A R + A+ + +++ +T + +S L + G L +EL +
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 307 SNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHG 366
P T +Y I+ F + L++A + M S ++ FN ++ YCK
Sbjct: 344 IQRGISP--DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 367 VIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRL---PINKRVR 423
+ID L++ M G A+ +TY L G + G LE+ K L +++RVR
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG-------KLEVAKELFQEMVSRRVR 454
Query: 424 NSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP- 482
P + + +++ + G+ E ++FE++ KSK +YN +I A D
Sbjct: 455 ---PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 483 -KLLRRMILGGARP 495
L + L G +P
Sbjct: 512 WDLFCSLPLKGVKP 525
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 190/473 (40%), Gaps = 56/473 (11%)
Query: 43 NLCRRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIR- 101
N C R KL SA+ ++ G+ + IN L + R E +E V R
Sbjct: 115 NCCCRCRKLS---LAFSAMGKIIKLGYEPDTVTFSTLIN---GLCLEGRVSEALELVDRM 168
Query: 102 -ERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR-VPSEFQ-NELLYNNLVIACLDKGVI 158
E ++P + + LV +S L R V + FQ NE+ Y ++ G
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 159 RLSLEYMKRMRE-------LGYPI-------------SHLVFNRL--------IILHSSP 190
L++E +++M E + Y I + +FN + II++++
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 191 ------SLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQV 244
+ R + KLL M K+TP V ++ L+ E L M R +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 245 EPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILY---GYLGNRKE 301
P+ ++Y L A ++ + G N T ++L+ Y + + E
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 302 LERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTV 361
L R S +R + T +Y I+ F +G LE A+E++ EM S + + + ++
Sbjct: 409 LFRKMS-LRGV-VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 362 YCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKR 421
C +G +KA +++ ++ + + + Y + G + + A +L LP+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW---DLFCSLPL--- 520
Query: 422 VRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY 474
+ P ++T ++ +KG + + LF ++ + + YN LI+A+
Sbjct: 521 -KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 160/378 (42%), Gaps = 45/378 (11%)
Query: 72 RSNDVFHAINRLRKLKMNKRALEVMEW-VIRERPYRPRELDYSY--------------LV 116
+S A+ LRK++ K L+ +++ +I + + LD ++ ++
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 117 EFTTKLHGISH------GEKLF-TRVPSEFQNELLYNNLVIACLDK-GVIRLSLEYMKRM 168
+TT + G + G KL + + +++ + +I C K G +R + E K M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 169 RELGYPISHLVFNRLIILHSSPSLRKNMMPK---LLTQMKADKVTPHVSTYNILMKIEAN 225
+ G + + LI ++N + K +L M + P++ T+NIL+
Sbjct: 344 IQRGISPDTVTYTSLI----DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 226 EHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAETYVEAVEKSMTGNNWS 284
+ +++ + F M LR V + ++Y L + +L A E + E V + + + S
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 285 TLDVLLILYGYLGNRKE------LERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEE 338
++L G N + E++ + EL Y + I ++ A +
Sbjct: 460 ---YKILLDGLCDNGEPEKALEIFEKIEKSKMELDI---GIYNIIIHGMCNASKVDDAWD 513
Query: 339 IWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGC 397
++ + KG+K V+ +N M+ CK G + +A L++ M+ +G N TY L
Sbjct: 514 LFCSL-PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 398 LKSGMEEQALKTLELGKR 415
L G ++ K +E KR
Sbjct: 573 LGEGDATKSAKLIEEIKR 590
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 144/333 (43%), Gaps = 9/333 (2%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
Y+ ++ + G I ++ K M G S + +N L+ + + N LL M
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV-RGLCKAGKWNDGALLLKDM 289
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLN 264
+ ++ P+V T+N+L+ + E L+ + M R + PN I+Y L + +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 265 TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYMLA 323
+ A ++ + ++ + T L+ Y + + +V+ NI + V +Y +
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
++ F + G ++ AEE++ EM S L V + ++ C +G ++KA ++++++ +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKG 443
+ Y + G K G E A L LP + P + T ++ +KG
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDA---WNLFCSLP----CKGVKPNVMTYTVMISGLCKKG 522
Query: 444 DVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ L ++ + YNTLI+A+ +
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 153/359 (42%), Gaps = 21/359 (5%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRKNMMPKLLT 202
+N L+ +G + ++ + RM E G + +N ++ I S + ++ LL
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT---SLALDLLR 217
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA- 261
+M+ V V TY+ ++ + ++ + F M+ + ++ + ++Y L A
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI--REL-PFVRTK 318
+ N A + V + + N T +VLL ++ G +E ++ + R + P + T
Sbjct: 278 KWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT- 335
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
Y ++ + L A + M K + F S++ YC +D ++++N+
Sbjct: 336 -YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
G ANA+TY L G +SG ++L + L P + T +++
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSG-------KIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDP-KLLRRMILGGARP 495
+ G +E ++FE+L KSK +Y T+I+ K K+ D L + G +P
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 16/279 (5%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKL 200
N + +N L+ + +G ++ + E K M G + + +N L+ + + R + +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN-RLSEANNM 355
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA- 259
L M +K +P + T+ L+K +++ M+ F + R + N ++Y IL
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLL--ILYGYLGNRKELERVWSNIRELPFVRT 317
++ A E + E V + DV+ IL L + +LE+ +L +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLP------DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 318 K----SYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAA 372
Y IE + G +E A ++ + KG+K +V + M++ CK G + +A
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
L + M+ +G N TY L L+ G + K +E
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 112/520 (21%), Positives = 208/520 (40%), Gaps = 83/520 (15%)
Query: 50 KLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRE 109
K P S W+RD VR + +INRL LK++ A+ + +++ RP+ P
Sbjct: 24 KCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDD-AVNLFGDMVKSRPF-PSI 81
Query: 110 LDYSYLVEFTTKLH---------------GISHGEKLFTRVPSEF--------------- 139
+++S L+ K++ GISH ++ + + F
Sbjct: 82 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 140 -------QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI---ILHSS 189
+ + N+L+ I ++ + +M E+GY FN LI H+
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN- 200
Query: 190 PSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEI 249
R + L+ +M P + TY I++ +++ + M+ ++EP +
Sbjct: 201 ---RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 250 SY-CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSN 308
Y I+ +N A + E K + N + ++ L Y G + R+ S+
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY-GRWSDASRLLSD 316
Query: 309 IREL---PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKH 365
+ E P V T S + I+AF + G L AE+++ EM + ++S++ +C H
Sbjct: 317 MIERKINPNVVTFSAL--IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 366 GVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL-ELGKRLPINKRVRN 424
+D+A +++ M + C N +TY L G K+ ++ ++ E+ +R + V
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 425 ST---------------------------PWLETTLSIVEIFAEKGDVENVEKLFEELHK 457
+T P + T +++ G VE +FE L +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 458 SKYCRYTFVYNTLIKAYAKA-KIYDP-KLLRRMILGGARP 495
SK + YN +I+ KA K+ D L + L G +P
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 175/422 (41%), Gaps = 38/422 (9%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR-VPSEFQNELLYNNLVIACLDK-GVIR 159
E Y+P ++ L+ + + S L R V Q +L+ +V+ L K G I
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 160 LSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNIL 219
L+L +K+M + +++N +I + N L T+M + P+V TYN L
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYK-NVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 220 MKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSM 278
++ N + R S M R++ PN +++ L A +L A + Y E +++S+
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 279 TGN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERA 336
+ +S+L ++ L K + + + P V T Y I+ F + ++
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLIKGFCKAKRVDEG 415
Query: 337 EEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALG 396
E++ EM + + + +++ + + D A ++K M ++G + +TY L G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 397 CLKSGMEEQALKTLELGKR----------------------------LPINKRVRNSTPW 428
+G E AL E +R L + ++ P
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 429 LETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK--AKIYDPKLLR 486
+ T +++ F KG E + LF E+ + + YNTLI+A+ + K +L+R
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 487 RM 488
M
Sbjct: 596 EM 597
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 22/305 (7%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAH 258
LL M+ TP V +Y+ ++ L+ + + +MK + ++PN Y I+
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYL--GNRKELERVWSNI--REL-P 313
+ +L A E + E + + + + T+ ++ G+ G+ + + + + R++ P
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPD---TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 314 FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVE-QFNSMMTVYCKHGVIDKAA 372
V T Y I F +IG + A +++ EM KGL+ F ++ YCK G + A
Sbjct: 385 DVLT--YTAIISGFCQIGDMVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
R++ +M GC N +TY L G K G + A + L ++ + P + T
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-------PNIFTY 494
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMIL 490
SIV + G++E KL E + T Y TL+ AY K+ D ++L+ M+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 491 GGARP 495
G +P
Sbjct: 555 KGLQP 559
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 141/329 (42%), Gaps = 14/329 (4%)
Query: 153 LDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPH 212
+D G++R + ++M G +S N + S + + + V +
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN 245
Query: 213 VSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETY-- 270
V++YNI++ ++ LM+L+ P+ ISY + + R + +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY--CRFGELDKVWKL 303
Query: 271 VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSN-IRELPFVRTKSYMLAIEAFGR 329
+E +++ N ++ L + E E +S IR+ T Y I+ F +
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 330 IGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAIT 389
G + A + + EM S V + ++++ +C+ G + +A +L+ M G + +++T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 390 YRQLALGCLKSGMEEQALKTLELGKRLPINKRVR-NSTPWLETTLSIVEIFAEKGDVENV 448
+ +L G K+G + A + N ++ +P + T ++++ ++GD+++
Sbjct: 424 FTELINGYCKAGHMKDAFRVH--------NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 449 EKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+L E+ K F YN+++ K+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 164/390 (42%), Gaps = 21/390 (5%)
Query: 99 VIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKG 156
V++ + +P Y ++ ++ ++ E+ F+ + + + ++Y L+ +G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 157 VIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP--KLLTQMKADKVTPHVS 214
IR + ++ M L + +I S +M+ KL +M + P
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAII---SGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEA 273
T+ L+ ++++ R + M PN ++Y L L++A E E
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIGH 332
+ + N + T + ++ GN +E ++ T +Y ++A+ + G
Sbjct: 483 WKIGLQPNIF-TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 333 LERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYR 391
+++A+EI EM KGL+ ++ FN +M +C HG+++ +L M A G NA T+
Sbjct: 542 MDKAQEILKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 392 QLALG-CLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEK 450
L C+++ ++ ++ R P +T ++V+ + +++
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCS--------RGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 451 LFEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
LF+E+ + Y+ LIK + K K +
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 15/194 (7%)
Query: 309 IRELPFV----RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCK 364
RE P V SY + I ++G ++ A + L ME V +++++ YC+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 365 HGVIDKAARLYKNMKANGCKANAITYRQ-LALGCLKSGMEEQALKTLELGKRLPINKRVR 423
G +DK +L + MK G K N+ Y + L C + E E+ ++ + V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 424 NSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK--IYD 481
+T +++ F ++GD+ K F E+H Y +I + + +
Sbjct: 354 YTT--------LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 482 PKLLRRMILGGARP 495
KL M G P
Sbjct: 406 GKLFHEMFCKGLEP 419
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 22/305 (7%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAH 258
LL M+ TP V +Y+ ++ L+ + + +MK + ++PN Y I+
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYL--GNRKELERVWSNI--REL-P 313
+ +L A E + E + + + + T+ ++ G+ G+ + + + + R++ P
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPD---TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 314 FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVE-QFNSMMTVYCKHGVIDKAA 372
V T Y I F +IG + A +++ EM KGL+ F ++ YCK G + A
Sbjct: 385 DVLT--YTAIISGFCQIGDMVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
R++ +M GC N +TY L G K G + A + L ++ + P + T
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-------PNIFTY 494
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMIL 490
SIV + G++E KL E + T Y TL+ AY K+ D ++L+ M+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 491 GGARP 495
G +P
Sbjct: 555 KGLQP 559
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 141/329 (42%), Gaps = 14/329 (4%)
Query: 153 LDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPH 212
+D G++R + ++M G +S N + S + + + V +
Sbjct: 186 VDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN 245
Query: 213 VSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETY-- 270
V++YNI++ ++ LM+L+ P+ ISY + + R + +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY--CRFGELDKVWKL 303
Query: 271 VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSN-IRELPFVRTKSYMLAIEAFGR 329
+E +++ N ++ L + E E +S IR+ T Y I+ F +
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 330 IGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAIT 389
G + A + + EM S V + ++++ +C+ G + +A +L+ M G + +++T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 390 YRQLALGCLKSGMEEQALKTLELGKRLPINKRVR-NSTPWLETTLSIVEIFAEKGDVENV 448
+ +L G K+G + A + N ++ +P + T ++++ ++GD+++
Sbjct: 424 FTELINGYCKAGHMKDAFRVH--------NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 449 EKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+L E+ K F YN+++ K+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 164/390 (42%), Gaps = 21/390 (5%)
Query: 99 VIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKG 156
V++ + +P Y ++ ++ ++ E+ F+ + + + ++Y L+ +G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 157 VIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP--KLLTQMKADKVTPHVS 214
IR + ++ M L + +I S +M+ KL +M + P
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAII---SGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEA 273
T+ L+ ++++ R + M PN ++Y L L++A E E
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIGH 332
+ + N + T + ++ GN +E ++ T +Y ++A+ + G
Sbjct: 483 WKIGLQPNIF-TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 333 LERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYR 391
+++A+EI EM KGL+ ++ FN +M +C HG+++ +L M A G NA T+
Sbjct: 542 MDKAQEILKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 392 QLALG-CLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEK 450
L C+++ ++ ++ R P +T ++V+ + +++
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCS--------RGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 451 LFEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
LF+E+ + Y+ LIK + K K +
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 15/194 (7%)
Query: 309 IRELPFV----RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCK 364
RE P V SY + I ++G ++ A + L ME V +++++ YC+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 365 HGVIDKAARLYKNMKANGCKANAITYRQ-LALGCLKSGMEEQALKTLELGKRLPINKRVR 423
G +DK +L + MK G K N+ Y + L C + E E+ ++ + V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 424 NSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK--IYD 481
+T +++ F ++GD+ K F E+H Y +I + + +
Sbjct: 354 YTT--------LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 482 PKLLRRMILGGARP 495
KL M G P
Sbjct: 406 GKLFHEMFCKGLEP 419
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 158/390 (40%), Gaps = 68/390 (17%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGI------SHGEKLFTR-VPSEFQNELL-YNNLVIACL 153
E Y+P FTT +HG+ S L + V Q +L+ Y +V
Sbjct: 181 EMGYKPDTF------TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 154 DKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK----NMMPKLLTQMKADKV 209
+G I L+L + +M + ++FN +I SL K + L T+M+ +
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTII-----DSLCKYRHVEVAVDLFTEMETKGI 289
Query: 210 TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH-AVARLNTAAE 268
P+V TYN L+ N + R S M +++ PN +++ L A +L A +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 269 TYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFG 328
+ E +++S+ + T +Y L I F
Sbjct: 350 LHEEMIQRSIDPD-----------------------------------TITYNLLINGFC 374
Query: 329 RIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAI 388
L+ A++++ M S L +++ +N+++ +CK ++ L++ M G N +
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 389 TYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI-VEIFAEKGDVEN 447
TY + G ++G + A ++ + V N P T SI + G ++
Sbjct: 435 TYTTIIQGFFQAGDCDSA--------QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 448 VEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+F+ L KS+ F+YNT+I+ KA
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 173/410 (42%), Gaps = 28/410 (6%)
Query: 75 DVFHAINRLRKLKMNKRALEVMEWV--IRERPYRPRELDYSYLVEFTTKLHGISHGEKLF 132
D F + L ++ +A E + V + +R +P + Y +V K I L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 133 TRVPSE--FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSP 190
++ + N +++N ++ + + ++++ M G + + +N LI +
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 191 SLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEIS 250
R + +LL+ M K+ P+V T+N L+ E L + M R ++P+ I+
Sbjct: 307 G-RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 251 YCILAYAHAV-ARLNTAAETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWS 307
Y +L + RL+ A + + V K N ++TL + G+ K +E
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL-----INGFC-KCKRVEDGVE 419
Query: 308 NIRELP----FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYC 363
RE+ T +Y I+ F + G + A+ ++ +M S + + ++ ++ C
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 364 KHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVR 423
+G +D A ++K ++ + + N Y + G K+G +A +L L I
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIK---- 532
Query: 424 NSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
P + T +++ K ++ + LF ++ + + YNTLI+A
Sbjct: 533 ---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 22/310 (7%)
Query: 174 PISHLV-FNRLIILHSSPSLRK-NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLEN 231
P +V FN+L L + + K ++ L QM+ ++ + TY+I + L
Sbjct: 79 PFPSIVEFNKL--LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 232 LMRFFSLMKLRQVEPNEISYCIL--AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVL 289
+ + M EP+ ++ L Y H+ R++ A + VE G T
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHS-KRISDAVALVDQMVE---MGYKPDTFTFT 192
Query: 290 LILYGYLGNRKELERVW---SNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESA 346
+++G + K E V ++ +Y + + G ++ A + +ME+A
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 347 KGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKS-GMEEQ 405
+ +V FN+++ CK+ ++ A L+ M+ G + N +TY L + CL + G
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL-INCLCNYGRWSD 311
Query: 406 ALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTF 465
A RL N + P + T ++++ F ++G + EKL EE+ + T
Sbjct: 312 A-------SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 466 VYNTLIKAYA 475
YN LI +
Sbjct: 365 TYNLLINGFC 374
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 137/307 (44%), Gaps = 26/307 (8%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-----CIL 254
LL +M+A K+ V +N ++ ++++ + F M+ + + PN ++Y C+
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 255 AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI--REL 312
+Y R + A++ + +EK + N T + L+ + G E E+++ ++ R +
Sbjct: 307 SYG----RWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 313 -PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
P + T Y + F L++A++++ M S V +N+++ +CK ++
Sbjct: 362 DPDIFT--YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLET 431
L++ M G + +TY L G G + A K + + V + P
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK--------QMVSDGVPPDIM 471
Query: 432 TLSIV-EIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRM 488
T SI+ + G +E ++F+ + KS+ ++Y T+I+ KA D L +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 489 ILGGARP 495
L G +P
Sbjct: 532 SLKGVKP 538
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 26/312 (8%)
Query: 174 PISHLV-FNRLIILHSSPSLRK-NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLEN 231
P+ +V FN+L L + ++K +++ L +M+ ++ + TYNIL+ +
Sbjct: 81 PLPSIVEFNKL--LSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISL 138
Query: 232 LMRFFSLMKLRQVEPNEISYCIL--AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVL 289
+ M EP+ ++ L Y H R++ A + VE G T+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQMVE---MGYRPDTITFT 194
Query: 290 LILYGYLGNRKELERVWSNIREL-----PFVRTKSYMLAIEAFGRIGHLERAEEIWLEME 344
+++G + K E V R + P + T Y + + + G + A + +ME
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT--YGVVVNGLCKRGDTDLALNLLNKME 252
Query: 345 SAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKS-GME 403
+AK V FN+++ CK+ +D A L+K M+ G + N +TY L + CL S G
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL-ISCLCSYGRW 311
Query: 404 EQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRY 463
A + L I K++ P L T ++++ F ++G EKL++++ K
Sbjct: 312 SDASQLLSD----MIEKKI---NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 464 TFVYNTLIKAYA 475
F YN+L+ +
Sbjct: 365 IFTYNSLVNGFC 376
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 6/210 (2%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
KL M + P + TYN L+ L+ + F M + P+ ++Y L
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 259 AVA-RLNTAAETYVEAVEKSMTGNN--WSTLDVLLILYGYLGNRKELERVWSNIRELPFV 315
+ R+ E + E + + G+ ++TL L G N +++ + + P +
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
T Y + ++ G LE+A E++ M+ ++ + + +M+ CK G +D L+
Sbjct: 471 MT--YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 376 KNMKANGCKANAITYRQLALG-CLKSGMEE 404
++ G K N +TY + G C K ++E
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 169/403 (41%), Gaps = 23/403 (5%)
Query: 80 INRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF 139
I+ KL N A+ + + +++ +P E Y+ L+ K+ + LF +
Sbjct: 240 ISSYEKLGRNDSAIRLFDE-MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 140 QNELLYN--NLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMM 197
+ +Y L+ G + + + K M G + N L+ + R +
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG-RVEEL 357
Query: 198 PKLLTQMKADKVTPHVSTYNILMK--IEANEHNLENLMRFFSLMKLRQVEPNEISYCILA 255
+ ++M + TP V +YN ++K E+ H + + +F MK V P+E +Y IL
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAH-VSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 256 YAHA-VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP- 313
+ R+ A E EK L LG K E +EL
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFP----PCPAAYCSLINALGKAKRYEAANELFKELKE 472
Query: 314 ---FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDK 370
V ++ Y + I+ FG+ G L A +++ EM++ V +N++M+ K G+I++
Sbjct: 473 NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINE 532
Query: 371 AARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLE 430
A L + M+ NGC+A+ ++ + G ++G+ +A++ E K I P
Sbjct: 533 ANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK-------PDGV 585
Query: 431 TTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
T +++ FA G E ++ E+ + Y++++ A
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 284 STLDVLLILYGYLGNRKELERVWSNI--RELPFVRTKSYMLAIEAFGRIGHLERAEEIWL 341
ST + ++++ G +++ V++ + F T +Y I ++ ++G + A ++
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 342 EMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSG 401
EM+ + + + +++ +Y K G ++KA L++ MK GC TY +L G K+G
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 402 MEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYC 461
++A + R + TP + +++ I + G VE + +F E+ +
Sbjct: 318 RVDEAYGFYKDMLRDGL-------TPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 462 RYTFVYNTLIKAYAKAKIY 480
YNT+IKA ++K +
Sbjct: 371 PTVVSYNTVIKALFESKAH 389
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 155/363 (42%), Gaps = 29/363 (7%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRKNMMPKLLT 202
YN L+ + G +R LE M M+ L + +N LI SL KL+
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR---KLME 369
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFF-SLMKLRQVEPNEISYCILAYAH-AV 260
QM+ D V + T+NI +K E E + R L+ + P+ ++Y L A+ V
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 261 ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRK--ELERVWSNIRELPFVRTK 318
L+ A E E +K + N T+ + IL RK E + ++ + F+ +
Sbjct: 430 GDLSGALEMMREMGQKGIKMN---TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 319 -SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKN 377
+Y I F R +E+A E+W EM+ K +V FNS++ C HG + A +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 378 MKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNS-TPWLETTLSIV 436
+ +G + T+ + LG K G E+A + N+ +++S P T ++
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEF--------YNESIKHSFKPDNYTCNILL 598
Query: 437 EIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK----IYDPKLLRRMILGG 492
++G E F L + + T YNT+I A+ K K YD LL M G
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREVD-TVTYNTMISAFCKDKKLKEAYD--LLSEMEEKG 655
Query: 493 ARP 495
P
Sbjct: 656 LEP 658
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 153/348 (43%), Gaps = 22/348 (6%)
Query: 144 LYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLII--LHSSPSLRKNMMPKLL 201
L++ + A L +G ++L+ ++M L + L N L+I + S + ++
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 202 TQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLR-QVEPNEISY-CILAYAHA 259
M V+ +V T+N+L+ E LE+ + M +V P+ ++Y IL
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGY--LGNRKELERVWSNIRE---LPF 314
RL+ E ++ + + N + + ++YGY LG+ KE ++ +++ LP
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNN---LVYGYCKLGSLKEAFQIVELMKQTNVLPD 309
Query: 315 VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARL 374
+ T Y + I G + E+ M+S K V +N+++ + G+ +A +L
Sbjct: 310 LCT--YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 375 YKNMKANGCKANAITYR-QLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL 433
+ M+ +G KAN +T+ L C + E K EL + +P + T
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL-------VDMHGFSPDIVTYH 420
Query: 434 SIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
++++ + + GD+ ++ E+ + T NT++ A K + D
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 6/316 (1%)
Query: 100 IRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVP--SEFQNELLYNNLVIACLDKGV 157
+ E + P + Y+ L++ K I + LF + NE Y L+ GV
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
+ E ++M+E G + +N ++ K+ ++ +M+ V+ ++ TYN
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF-QVFDEMRERGVSCNIVTYN 307
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH-AVARLNTAAETYVEAVEK 276
L+ E L + MK + PN I+Y L V +L A + +
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYMLAIEAFGRIGHLER 335
++ + T ++L+ + G+ ++ + E +K +Y + I+ F R ++E+
Sbjct: 368 GLSPS-LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 336 AEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLAL 395
A ++ L ME + V ++ ++ +C G +++A+RL+K+M C+ N + Y + L
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 396 GCLKSGMEEQALKTLE 411
G K G +ALK L+
Sbjct: 487 GYCKEGSSYRALKLLK 502
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 136/341 (39%), Gaps = 52/341 (15%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK- 199
N ++Y L+ C KG I + + M +LG + + LI L KN + K
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI-----NGLFKNGVKKQ 251
Query: 200 ---LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAY 256
+ +M+ D V P++ TYN +M + ++ + F M+ R V N ++Y L
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 257 AHA-VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV 315
+LN A + + + N LI Y L
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPN--------LITYNTL------------------- 344
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
I+ F +G L +A + +++S S+ +N +++ +C+ G AA++
Sbjct: 345 --------IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
K M+ G K + +TY L +S E+A+ +L ++ P + T +
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAI-------QLRLSMEELGLVPDVHTYSVL 449
Query: 436 VEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ F KG + +LF+ + + +YNT+I Y K
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 134/338 (39%), Gaps = 16/338 (4%)
Query: 144 LYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQ 203
LY ++ + + + LS+ Y M + G+ FN L+ S N +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSS-SFNQWWSFFNE 154
Query: 204 MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VAR 262
K+ KV V ++ IL+K +E + PN + Y L
Sbjct: 155 NKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 263 LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP-FVRTKSYM 321
+ A + + E + + N T VL+ G +K+ ++ ++E F +Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANE-RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 322 LAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKAN 381
+ + G + A +++ EM ++ +N+++ C+ +++A ++ MK++
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 382 GCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINK--RVRNSTPWLETTLSIVEIF 439
G N ITY L G G +LGK L + + + R +P L T +V F
Sbjct: 333 GINPNLITYNTLIDGFCGVG---------KLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 440 AEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
KGD K+ +E+ + Y LI +A++
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 137/307 (44%), Gaps = 26/307 (8%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-----CIL 254
LL +M+A K+ V +N ++ ++++ + F M+ + + PN ++Y C+
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 255 AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI--REL 312
+Y R + A++ + +EK + N T + L+ + G E E++ ++ R +
Sbjct: 232 SYG----RWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 313 -PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
P + T Y I F L++A++++ M S ++ +N+++ +CK ++
Sbjct: 287 DPDIFT--YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLET 431
L++ M G + +TY L G G + A K + + V + P
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK--------QMVSDGVPPDIM 396
Query: 432 TLSIV-EIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRM 488
T SI+ + G +E ++F+ + KS+ ++Y T+I+ KA D L +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 489 ILGGARP 495
L G +P
Sbjct: 457 SLKGVKP 463
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 25/305 (8%)
Query: 180 FNRLIILHSSPSLRK-NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSL 238
FN+L L + ++K +++ L +M+ ++ ++ TYNIL+ + +
Sbjct: 13 FNKL--LSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70
Query: 239 MKLRQVEPNEISYCIL--AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYL 296
M EP+ ++ L Y H R++ A + VE G T+ +++G
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHG-KRISDAVALVDQMVE---MGYRPDTITFTTLIHGLF 126
Query: 297 GNRKELERVWSNIREL-----PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKS 351
+ K E V R + P + T Y + + + G ++ A + +ME+AK
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVT--YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 352 VEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKS-GMEEQALKTL 410
V FN+++ CK+ +D A L+K M+ G + N +TY L + CL S G A + L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL-ISCLCSYGRWSDASQLL 243
Query: 411 ELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTL 470
IN P L T ++++ F ++G EKL +++ K F YN+L
Sbjct: 244 SDMIEKKIN-------PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 471 IKAYA 475
I +
Sbjct: 297 INGFC 301
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 6/210 (2%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
KL M + P + TYN L+ L+ + F M + P+ +Y L
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 259 AVA-RLNTAAETYVEAVEKSMTGNN--WSTLDVLLILYGYLGNRKELERVWSNIRELPFV 315
+ R+ E + E + + G+ ++TL L G N +++ + + P +
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
T Y + ++ G LE+A E++ M+ ++ + + +M+ CK G +D L+
Sbjct: 396 MT--YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 376 KNMKANGCKANAITYRQLALG-CLKSGMEE 404
++ G K N +TY + G C K ++E
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 174/398 (43%), Gaps = 23/398 (5%)
Query: 90 KRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHG----ISHGEKLFTRVPSEFQNELL- 144
+RA+ + EW++ +LD+ ++E ++ G S KL ++P Q LL
Sbjct: 153 ERAVFLFEWLVLSSNSGALKLDHQ-VIEIFVRILGRESQYSVAAKLLDKIP--LQEYLLD 209
Query: 145 ---YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLL 201
Y ++ A G +++ +RM+E+G + + +N ++ + + +L
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 202 TQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA 261
+M++ + T + ++ A E L FF+ +K EP ++Y L A
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---LPFVRTK 318
+ T A + ++ +E++ + T + L+ Y G KE V + + +P T
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT- 388
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
Y I+A+G+ G + A +++ M+ A + + +N+++++ K ++ ++ +M
Sbjct: 389 -YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
K+NGC N T+ + C GM++ + K P +T +++
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFE-------PDRDTFNTLISA 500
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ G + K++ E+ ++ + YN L+ A A+
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 141/345 (40%), Gaps = 17/345 (4%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKL 200
N +N ++ C +KG+ + + M+ G+ FN LI + + K+
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA-SKM 513
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
+M V+TYN L+ A + + + S MK + +P E SY ++ +A
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 261 ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---LPFVRT 317
E +++ +W L LL+ ER ++ ++ P +
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 318 KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYK 376
+ ML+I F R ++AE I LE GL + +NS+M +Y + G KA + K
Sbjct: 634 FNSMLSI--FTRNNMYDQAEGI-LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 377 NMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIV 436
++ + K + ++Y + G + G+ ++A++ L R P + T + V
Sbjct: 691 TLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS-------EMTERGIRPCIFTYNTFV 743
Query: 437 EIFAEKGDVENVEKLFEELHKSKYCRYT-FVYNTLIKAYAKAKIY 480
+ G +E + E + K+ CR + ++ Y +A Y
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKND-CRPNELTFKMVVDGYCRAGKY 787
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 179/431 (41%), Gaps = 29/431 (6%)
Query: 76 VFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRV 135
+ + R RKL + A M +I+ Y P + +S L+ +S +L R+
Sbjct: 129 MINCFCRCRKLCL---AFSAMGKIIK-LGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 136 ------PSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSS 189
P L N L ++ G ++ + +M E G + + + ++ +
Sbjct: 185 VEMGHKPDLITINTLVNGLCLS----GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 190 PSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEI 249
S + + +LL +M+ + Y+I++ +L+N F+ M+++ + N I
Sbjct: 241 -SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 250 SYCIL--AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWS 307
+Y IL + +A R + A+ + +++ + N T VL+ + G +E E +
Sbjct: 300 TYNILIGGFCNA-GRWDDGAKLLRDMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 308 NIRELPFV-RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHG 366
+ T +Y I+ F + HL++A ++ M S ++ FN ++ YCK
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 367 VIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNST 426
ID L++ M G A+ +TY L G + G L + K L R
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG-------KLNVAKELFQEMVSRKVP 470
Query: 427 PWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KL 484
P + T +++ + G+ E ++FE++ KSK +YN +I A D L
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 485 LRRMILGGARP 495
+ L G +P
Sbjct: 531 FCSLPLKGVKP 541
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/370 (18%), Positives = 153/370 (41%), Gaps = 44/370 (11%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLII-LHSSPSLRKNMMPK 199
N + Y ++ G L++E +++M E + + ++ +I L SL
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF--N 284
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L +M+ +T ++ TYNIL+ N ++ + M R++ PN +++ +L +
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 260 V-ARLNTAAETYVEAVEKSMTGNN--WSTLDVLLILYGYLGNRKELERVWSNIRELPFVR 316
+L A E + E + + + + +++L +L ++ + + P +R
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYK 376
T + + I + + ++ E++ +M + +N+++ +C+ G ++ A L++
Sbjct: 405 T--FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 377 NMKANGCKANAITYRQLALGCLKSGMEEQALKTLE------------------------- 411
M + N +TY+ L G +G E+AL+ E
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 412 -------LGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYT 464
L LP+ + P ++T ++ +KG + E LF ++ + +
Sbjct: 523 KVDDAWDLFCSLPL----KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 465 FVYNTLIKAY 474
+ YN LI+A+
Sbjct: 579 WTYNILIRAH 588
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 10/280 (3%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRKNMMP 198
N + ++ L+ + + +G +R + E K M G + + LI + + N M
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
L+ D P++ T+NIL+ + +++ + F M LR V + ++Y L
Sbjct: 392 DLMVSKGCD---PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 259 A-VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VR 316
+ +LN A E + E V + + N T +LL G ++ ++ I + +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVP-PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLY 375
Y + I ++ A +++ + KG+K V+ +N M+ CK G + +A L+
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKR 415
+ M+ +G + TY L L G +++K +E KR
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 20/309 (6%)
Query: 195 NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQV--EPNEISYC 252
+++ L QM+ + ++ T +I++ L + F ++ K+ ++ EPN I++
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL--CLAFSAMGKIIKLGYEPNTITFS 162
Query: 253 ILAYAHAV-ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE 311
L + R++ A E VE G+ + + ++ G + KE E + +
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVE---MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 312 LPF---VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVI 368
+ + +Y + + G A E+ +ME +++ ++ CKHG +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 369 DKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPW 428
D A L+ M+ G N ITY L G +G + K L R I +++ P
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL----RDMIKRKI---NPN 332
Query: 429 LETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLR 486
+ T +++ F ++G + E+L +E+ T Y +LI + K D +++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 487 RMILGGARP 495
M+ G P
Sbjct: 393 LMVSKGCDP 401
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 13/327 (3%)
Query: 92 ALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF--QNELLYNNLV 149
AL+V+ ++ + +P + Y+ L+E T G+ KL + S + YN ++
Sbjct: 212 ALKVLNQLLSDN-CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 150 IACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK-NMMPKLLTQMKADK 208
+G++ + E ++ + G + +N I+L + + K KL+T+M ++K
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYN--ILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAA 267
P+V TY+IL+ + +E M LMK + + P+ SY L A RL+ A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 268 ETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIE 325
E + + N++T+ L G E+ + P + SY
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP--NSSSYNTMFS 446
Query: 326 AFGRIGHLERAEEIWLEMESAKGLKSVE-QFNSMMTVYCKHGVIDKAARLYKNMKANGCK 384
A G RA + LEM S G+ E +NSM++ C+ G++D+A L +M++
Sbjct: 447 ALWSSGDKIRALHMILEMMS-NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 385 ANAITYRQLALGCLKSGMEEQALKTLE 411
+ +TY + LG K+ E A+ LE
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLE 532
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 150/368 (40%), Gaps = 33/368 (8%)
Query: 145 YNNLVIAC--LDKGVIRL-----SLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMM 197
YN VI C L KG L ++ M+ + + G P +N LI + R +
Sbjct: 120 YNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFAYNALINGFCKMN-RIDDA 177
Query: 198 PKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYA 257
++L +M++ +P TYNI++ + L+ ++ + + +P I+Y IL A
Sbjct: 178 TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Query: 258 HAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYL--GNRKE--LERVWSNIRELP 313
T E V+ K M L + Y + G KE ++R + +R L
Sbjct: 238 -------TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 314 FVRTK----SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVID 369
+ SY + + A G E E++ +M S K +V ++ ++T C+ G I+
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 370 KAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWL 429
+A L K MK G +A +Y L + G + A++ LE P +
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE-------TMISDGCLPDI 403
Query: 430 ETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY--AKAKIYDPKLLRR 487
+++ + G + ++F +L + + YNT+ A + KI ++
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 488 MILGGARP 495
M+ G P
Sbjct: 464 MMSNGIDP 471
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 146/330 (44%), Gaps = 5/330 (1%)
Query: 75 DVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
D + A L+++ AL W+ R+ ++ Y+ +V + KL
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDE 389
Query: 135 VPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSL 192
+ + N + YN L+ + + ++ +M+E G + + LI +H+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
M + +M+A ++P TY++++ +L + F M + PN ++Y
Sbjct: 450 LDIAM-DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
I+ HA AR A ++ + + T +++ + G+ G +E E V++ +++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 313 PFVRTKS-YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
++ + Y L ++ +G+ G++E+A + + M A +V NS+++ + + I +A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSG 401
L +NM A G + + TY L L C G
Sbjct: 629 YELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 146/330 (44%), Gaps = 5/330 (1%)
Query: 75 DVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
D + A L+++ AL W+ R+ ++ Y+ +V + KL
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDE 389
Query: 135 VPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSL 192
+ + N + YN L+ + + ++ +M+E G + + LI +H+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
M + +M+A ++P TY++++ +L + F M + PN ++Y
Sbjct: 450 LDIAM-DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
I+ HA AR A ++ + + T +++ + G+ G +E E V++ +++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 313 PFVRTKS-YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
++ + Y L ++ +G+ G++E+A + + M A +V NS+++ + + I +A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSG 401
L +NM A G + + TY L L C G
Sbjct: 629 YELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 146/330 (44%), Gaps = 5/330 (1%)
Query: 75 DVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
D + A L+++ AL W+ R+ ++ Y+ +V + KL
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDE 389
Query: 135 VPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSL 192
+ + N + YN L+ + + ++ +M+E G + + LI +H+
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
M + +M+A ++P TY++++ +L + F M + PN ++Y
Sbjct: 450 LDIAM-DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
I+ HA AR A ++ + + T +++ + G+ G +E E V++ +++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 313 PFVRTKS-YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
++ + Y L ++ +G+ G++E+A + + M A +V NS+++ + + I +A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSG 401
L +NM A G + + TY L L C G
Sbjct: 629 YELLQNMLALGLRPSLQTY-TLLLSCCTDG 657
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 171/412 (41%), Gaps = 39/412 (9%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGI------SHGEKLFTR-VPSEFQNELLYNNLVIACLD 154
E YRP + FTT +HG+ S L R V Q L+ +V+ L
Sbjct: 183 EMGYRPDT------ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 155 K-GVIRLSLEYMKRMRELGYPISHLVFNRLI-----ILHSSPSLRKNMMPKLLTQMKADK 208
K G I L+ + +M + ++++ +I H +L L T+M+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL------NLFTEMENKG 290
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAA 267
V P+V TY+ L+ N + R S M R++ PN +++ L A +L A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 268 ETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIE 325
+ Y E +++S+ + +S+L ++ L K + + + P V T Y I
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YNTLIN 408
Query: 326 AFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKA 385
F + ++ E++ EM + + + +++ + + D A ++K M ++G
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 386 NAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDV 445
N +TY L G K+G E+A+ E +R + P + T ++E + G V
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME-------PTIYTYNIMIEGMCKAGKV 521
Query: 446 ENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMILGGARP 495
E+ LF L +YNT+I + + + + L R+M G P
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 141/337 (41%), Gaps = 43/337 (12%)
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLI---ILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
I ++ + +M E+GY + F LI LH+ S L+ +M P++
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS----EAVALVDRMVQRGCQPNLV 226
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC-----ILAYAHAVARLNTAAET 269
TY +++ +++ + M+ ++E N + Y + Y H LN E
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 270 YVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL----------PFVRTKS 319
+ V ++ +S+L L Y ER WS+ L P V T
Sbjct: 287 ENKGVRPNVI--TYSSLISCLCNY---------ER-WSDASRLLSDMIERKINPNVVT-- 332
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
+ I+AF + G L AE+++ EM + ++S++ +C H +D+A +++ M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIF 439
+ C N +TY L G K+ ++ +EL + + V N+ + TTL + F
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEG---VELFREMSQRGLVGNTVTY--TTL--IHGF 445
Query: 440 AEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ D +N + +F+++ YNTL+ K
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 106/500 (21%), Positives = 200/500 (40%), Gaps = 105/500 (21%)
Query: 81 NRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHG----ISHGEKLFTRVP 136
N L +K++ A+ + +++ RP P +++ L+ K+ IS GEK+
Sbjct: 59 NGLHSMKLDD-AIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 137 SEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLII-------LHSS 189
S N YN L+ + I L+L + +M +LGY S + + L+ + +
Sbjct: 117 S--HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 190 PSLRKNMM-----PKLLT----------------------QMKADKVTPHVSTYNILM-- 220
+L M+ P +T +M P++ TY +++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 221 --------------------KIEAN--------------EHNLENLMRFFSLMKLRQVEP 246
KIEAN H ++ + F+ M+ + V P
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-DDALNLFTEMENKGVRP 293
Query: 247 NEISY-----CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKE 301
N I+Y C+ Y R + A+ + +E+ + N T + L+ + G E
Sbjct: 294 NVITYSSLISCLCNY----ERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVE 348
Query: 302 LERVWSNI--REL-PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSM 358
E+++ + R + P + T S + I F L+ A+ ++ M S +V +N++
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSL--INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 359 MTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPI 418
+ +CK ID+ L++ M G N +TY L G ++ + A ++
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA--------QMVF 458
Query: 419 NKRVRNST-PWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+ V + P + T ++++ + G +E +FE L +SK + YN +I+ KA
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 478 -KIYDP-KLLRRMILGGARP 495
K+ D L + L G +P
Sbjct: 519 GKVEDGWDLFCSLSLKGVKP 538
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/504 (19%), Positives = 189/504 (37%), Gaps = 102/504 (20%)
Query: 51 LPKGEPVGSALRSWM-RDGFPVRSNDVFHA-----------INRLRKLKMNKR---ALEV 95
P P+ + S++ ++ P + DV A IN +L++NK+ + V
Sbjct: 104 FPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILV 163
Query: 96 MEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR------VPSEFQNELLYNNLV 149
EW++R+ ++P + ++ L++ + E L+ + VP+E LL
Sbjct: 164 CEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 223
Query: 150 IACL-----------------------------------DKGVIRLSLEYMKRMRELGYP 174
+A L KG +++ +RM+
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283
Query: 175 ISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMR 234
+ +N +I L+ S + M KL +M++ + P++ TY L+ A E E
Sbjct: 284 PTTETYNLMINLYGKAS-KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 235 FFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYG 294
F ++ +EP+ Y L +++ A A ++ + ++ ++++ YG
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 295 YLGNRKELERVWSNIRELPFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVE 353
G + E V+ ++ L T KS+ML + A+ + + + E I EM
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 354 QFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELG 413
NSM+ +Y + G K ++ M+ C A+ TY L
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL-------------------- 502
Query: 414 KRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
+ I+ + G +E +E+LF EL + + + + I A
Sbjct: 503 ----------------------INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 540
Query: 474 YAKAKIYDPKL--LRRMILGGARP 495
Y++ K+Y L MI G P
Sbjct: 541 YSRKKLYVKCLEVFEEMIDSGCAP 564
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 7/340 (2%)
Query: 76 VFHA-INRLRKLKMN-KRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFT 133
V++A I L K K N + A++V + + R+R +P Y+ ++ K KL+
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 134 RVPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPS 191
+ S N Y LV A +G+ + E ++++E G V+N L+ +S
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 192 LRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
++ + M+ P ++YNI++ + F MK + P S+
Sbjct: 371 YPYGA-AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
Query: 252 CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE 311
+L A++ AR T E V+ + ++ + L+ +L LYG LG ++E++ + +
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 489
Query: 312 LPFV-RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDK 370
P +Y + I +G+ G LER EE+++E++ V + S + Y + + K
Sbjct: 490 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 549
Query: 371 AARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL 410
+++ M +GC + T + L C EQ L
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 170/412 (41%), Gaps = 39/412 (9%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGI------SHGEKLFTR-VPSEFQNELL-YNNLVIACL 153
E Y+P FTT +HG+ S L + V Q +L+ Y +V
Sbjct: 181 EMGYKPDTF------TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 154 DKGVIRLSLEYMKRMRELGYPISHLVFNRLI-----ILHSSPSLRKNMMPKLLTQMKADK 208
+G I L+L +K+M + +++N +I H +L L T+M
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL------NLFTEMDNKG 288
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAA 267
+ P V TY+ L+ N + R S M R++ PN +++ L A +L A
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 268 ETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIE 325
+ Y E +++S+ + +S+L ++ L K + + + P V T Y I+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--YSTLIK 406
Query: 326 AFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKA 385
F + +E E++ EM + + + +++ + + D A ++K M + G
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 386 NAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDV 445
N +TY L G K+G +A+ E +R + P + T ++E + G V
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME-------PDIYTYNIMIEGMCKAGKV 519
Query: 446 ENVEKLFEELHKSKYCRYTFVYNTLIKAYAK--AKIYDPKLLRRMILGGARP 495
E+ +LF L YNT+I + + +K LL++M G P
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 25/340 (7%)
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLI---ILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
I ++ + +M E+GY F LI LH+ S L+ QM P +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS----EAVALVDQMVQRGCQPDLV 224
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAHAVARLNTAAETYVEA 273
TY ++ +++ + M+ ++E + + Y I+ ++ A + E
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGRI 330
K + + ++ ++ L Y G + R+ S++ E P V T S + I+AF +
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNY-GRWSDASRLLSDMIERKINPNVVTFSAL--IDAFVKE 341
Query: 331 GHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITY 390
G L AE+++ EM + ++S++ +C H +D+A +++ M + C N +TY
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 391 RQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEK 450
L G K+ E+ +EL + + V N+ + TTL + F + D +N +
Sbjct: 402 STLIKGFCKAKRVEEG---MELFREMSQRGLVGNTVTY--TTL--IHGFFQARDCDNAQM 454
Query: 451 LFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKLLRRMIL 490
+F+++ YN L+ K + KL + M++
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCK----NGKLAKAMVV 490
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 211 PHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETY 270
P+V TY+ L+K +E M F M R + N ++Y L + AR A+
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 271 VEAVEKSMTGNNWSTLDVLL-------------ILYGYLGNRKELERVWSNIRELPFVRT 317
+ + N T ++LL +++ YL R +E P + T
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL-QRSTME---------PDIYT 505
Query: 318 KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYK 376
Y + IE + G +E E++ + S KG+ +V +N+M++ +C+ G ++A L K
Sbjct: 506 --YNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 377 NMKANGCKANAITYRQLALGCLKSGMEEQA 406
MK +G N+ TY L L+ G E +
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 7/340 (2%)
Query: 76 VFHA-INRLRKLKMN-KRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFT 133
V++A I L K K N + A++V + + R+R +P Y+ ++ K KL+
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 134 RVPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPS 191
+ S N Y LV A +G+ + E ++++E G V+N L+ +S
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 192 LRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
++ + M+ P ++YNI++ + F MK + P S+
Sbjct: 349 YPYGA-AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 407
Query: 252 CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE 311
+L A++ AR T E V+ + ++ + L+ +L LYG LG ++E++ + +
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 467
Query: 312 LPFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDK 370
P +Y + I +G+ G LER EE+++E++ V + S + Y + + K
Sbjct: 468 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 527
Query: 371 AARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL 410
+++ M +GC + T + L C EQ L
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/504 (19%), Positives = 190/504 (37%), Gaps = 102/504 (20%)
Query: 51 LPKGEPVGSALRSWM-RDGFPVRSNDVFHA-----------INRLRKLKMNKR---ALEV 95
P P+ + S++ ++ P + DV A IN +L++NK+ + V
Sbjct: 82 FPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILV 141
Query: 96 MEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR------VPSEFQNELLYNNLV 149
EW++R+ ++P + ++ L++ + E L+ + VP+E LL
Sbjct: 142 CEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 201
Query: 150 IACL-----------------------------------DKGVIRLSLEYMKRMRELGYP 174
+A L KG +++ +RM+
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261
Query: 175 ISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMR 234
+ +N +I L+ S + M KL +M++ + P++ TY L+ A E E
Sbjct: 262 PTTETYNLMINLYGKAS-KSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 235 FFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYG 294
F ++ +EP+ Y L +++ A A ++ + ++ ++++ YG
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 295 YLGNRKELERVWSNIRELPFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVE 353
G + E V+ ++ L T KS+ML + A+ + + + E I EM
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 354 QFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELG 413
NSM+ +Y + G K ++ M+ C A+ TY L
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL-------------------- 480
Query: 414 KRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
+ I+ + G +E +E+LF EL + + + + I A
Sbjct: 481 ----------------------INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 518
Query: 474 YAKAKIYDP--KLLRRMILGGARP 495
Y++ K+Y ++ MI G P
Sbjct: 519 YSRKKLYVKCLEVFEEMIDSGCAP 542
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 162/374 (43%), Gaps = 29/374 (7%)
Query: 100 IRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQ-------NELLYNNLVIAC 152
+ ER P + Y+ L+ KL + ++F EF N Y L+
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIF-----EFMIERGVRPNVYTYTGLIDGL 327
Query: 153 LDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPH 212
G + +L+ + M E + + +N +I L + + +++ MK + P
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV-EIVELMKKRRTRPD 386
Query: 213 VSTYNILMKIEANEHNLENLMRFFSLM--KLRQVEPNEISYCILAYAHAVA---RLNTAA 267
TYNIL+ + +L+ + LM +P+ ISY A H + RL+ A
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN--ALIHGLCKENRLHQAL 444
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR-TKSYMLAIEA 326
+ Y VEK G+ +T ++LL G+ + +W I + VR + +Y I+
Sbjct: 445 DIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 327 FGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKAN 386
F + G L A+ + +M ++ SV +N +++ CK G +D+A RL++ M+ + +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 387 AITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVE 446
+++ + G LK+G ++ + L + +P L T ++ F + G ++
Sbjct: 564 VVSFNIMIDGSLKAG-------DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLD 616
Query: 447 NVEKLFEELHKSKY 460
F+++ S +
Sbjct: 617 EAISFFDKMVDSGF 630
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 18/293 (6%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAE 268
V P+V TY L+ + ++ +LM + EPN ++Y I+ L A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 269 TYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELER----VWSNIRELPFVRTK--SYML 322
VE ++K T + T ++LL G L + +L+ ++ +++ + SY
Sbjct: 373 EIVELMKKRRTRPDNITYNILL---GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG 382
I + L +A +I+ + G N ++ K G ++KA L+K + +
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 383 CKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEK 442
N+ TY + G K+GM L + K L RV P + ++ ++
Sbjct: 490 IVRNSDTYTAMIDGFCKTGM-------LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 443 GDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKLLRRMILGGARP 495
G ++ +LFEE+ + +N +I KA D K +++G +R
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG--DIKSAESLLVGMSRA 593
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 145/344 (42%), Gaps = 21/344 (6%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQ- 203
YNNL+ AC G R +LE K+M + G + N I+L + S R+ K L+
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN--IVLSAYKSGRQ--YSKALSYF 271
Query: 204 --MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVE--PNEISYCILAYAHA 259
MK KV P +T+NI++ + + F+ M+ ++ E P+ +++ + + ++
Sbjct: 272 ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYS 331
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RTK 318
V EA+ N + + L+ Y G V +I++ +
Sbjct: 332 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 391
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
SY + ++GR +A+E++L M + +V +N+++ Y +G + +A +++ M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL--SIV 436
+ +G K N ++ L C +S + L + IN L T S +
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN---------LNTAAYNSAI 502
Query: 437 EIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
+ ++E L++ + K K + + LI + Y
Sbjct: 503 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 125/286 (43%), Gaps = 18/286 (6%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L+ M + P STYN L+ + N + M V P+ +++ I+ A+
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE-----LPF 314
R + A +Y E ++ + + +T ++++ LG + +++++RE P
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 315 VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAAR 373
V T + ++ + + G +E + E A+GLK ++ +N++M Y HG+ A
Sbjct: 320 VVTFTSIMHL--YSVKGEIENCRAV-FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 374 LYKNMKANGCKANAITYRQLALGCLKS-GMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
+ ++K NG + ++Y L L S G Q K K + + R P + T
Sbjct: 377 VLGDIKQNGIIPDVVSYTCL----LNSYGRSRQPGKA----KEVFLMMRKERRKPNVVTY 428
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK 478
++++ + G + ++F ++ + TL+ A +++K
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 170/443 (38%), Gaps = 68/443 (15%)
Query: 83 LRKLKMNKRALEVMEWVIRERP-YRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF-- 139
L KL + +AL++ + +R RP + ++ ++ + I + +F + +E
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 140 QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK 199
N + YN L+ A G+ +L + +++ G I +V ++ S + +
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI-IPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
+ M+ ++ P+V TYN L+ + L + F M+ ++PN +S C L A +
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 260 VAR------------------LNTAA-----ETYVEAVE------------KSMTGNNWS 284
++ LNTAA +Y+ A E K +
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 285 TLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS-YMLAIEAFGRIGHLERAEEIWLEM 343
T +L+ + E + +L TK Y + A+ + G + AE I+ +M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 344 ESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGME 403
+ A V + SM+ Y KA L+ M+ANG + ++I L K G
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
Query: 404 EQALKTLEL--GKRLPINKRV---------------------RNSTPWLET-----TLSI 435
++L K +P V + P+L + T +
Sbjct: 652 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQM 711
Query: 436 VEIFAEKGDVENVEKLFEELHKS 458
+ +F + G VE + KLF ++ S
Sbjct: 712 LHLFGKSGKVEAMMKLFYKIIAS 734
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 176/407 (43%), Gaps = 25/407 (6%)
Query: 100 IRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRV-----PSEFQNELLYNNLVIACLD 154
I +R P + YS L++ K + G L+ + P + ++Y LV
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV---VIYGVLVDGLSK 473
Query: 155 KGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
+G++ ++ + +M ++ +VFN LI + R + K+ M + P V+
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN-RFDEALKVFRLMGIYGIKPDVA 532
Query: 215 TYNILMKIEANEHNLEN-LMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEA 273
T+ +M++ E LE L FF + K+ +EP+ ++YC L A T +
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGRI 330
++++ + + +V++ L ++ + ++N+ E P + T + M+ + +
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC--GYCSL 649
Query: 331 GHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITY 390
L+ AE I+ ++ + ++ V CK+ +D A R++ M G K NA+TY
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 391 RQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEK 450
GCL + +E +L + + +P + + I++ ++G V+
Sbjct: 710 -----GCLMDWFSKSV--DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 451 LFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDPKLL-RRMILGGARP 495
+F + +K Y LI+ Y K ++ + LL M+ G +P
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKN 377
+Y I+ + + G L +++ + KG+K V F+S + VY K G + A+ +YK
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQ-ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 378 MKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
M G N +TY L G + G +A G+ L R P + T S+++
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGM--YGQILK-----RGMEPSIVTYSSLID 434
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
F + G++ + L+E++ K Y +Y L+ +K
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 182/440 (41%), Gaps = 39/440 (8%)
Query: 68 GFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISH 127
G R+ND+ A+N + K+ R+ Y+ ++YS +++ T+ + I
Sbjct: 205 GACARNNDIEKALNLIAKM--------------RQDGYQSDFVNYSLVIQSLTRSNKID- 249
Query: 128 GEKLFTRVPSEFQNE------LLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFN 181
+ R+ E + + L N++++ G +L+ + + G
Sbjct: 250 -SVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLV 308
Query: 182 RLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKL 241
II + S R L +++ + P YN L+K L++ S M+
Sbjct: 309 S-IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 242 RQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKE 301
R V P+E +Y +L A+ A +A ++ +E N LL + +R E
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF---RDRGE 424
Query: 302 LERVWSNIRELPFVRTKS----YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNS 357
++ + ++E+ + K Y + I+ FG+ L+ A + M S +N+
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 358 MMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLP 417
++ +CKHG A +++ M+ GC A TY + + S +++ + KRL
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM----INSYGDQERWDDM---KRLL 537
Query: 418 INKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+ + P + T ++V+++ + G + + EE+ + +YN LI AYA+
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 478 KIYDPKL--LRRMILGGARP 495
+ + + R M G +P
Sbjct: 598 GLSEQAVNAFRVMTSDGLKP 617
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
Query: 100 IRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKGV 157
+R+ +PR Y+ L++ K + E + + + +E Y+ L+ A ++ G
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLII-LHSSPSLRKNMMPKLLTQMKADKVTPHVSTY 216
+ +K M + VF+RL+ +K ++L +MK+ V P Y
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF--QVLKEMKSIGVKPDRQFY 447
Query: 217 NILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEK 276
N+++ + L++ M F M +EP+ +++ L H + AE EA+E+
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---LPFVRTKSYMLAIEAFGRIGHL 333
+T ++++ YG +++R+ ++ LP V T + + ++ +G+ G
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL--VDVYGKSGRF 565
Query: 334 ERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
A E EM+S GLK S +N+++ Y + G+ ++A ++ M ++G K + +
Sbjct: 566 NDAIECLEEMKSV-GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 393 L 393
L
Sbjct: 625 L 625
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%), Gaps = 30/309 (9%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-----CIL 254
LL +M+ K+ P V YN ++ ++++ + F M+ + + PN ++Y C+
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 255 AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI--REL 312
Y R + A+ + +E+ + + + T L+ + G E E+++ + R +
Sbjct: 303 NYG----RWSDASRLLSDMIERKINPDVF-TFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 313 -PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
P + T S + I F L+ A++++ M S V +N+++ +CK+ +++
Sbjct: 358 DPSIVTYSSL--INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSG---MEEQALKTLELGKRLPINKRVRNSTPW 428
+++ M G N +TY L G ++G M ++ K + + +P P
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VSDGVP---------PN 465
Query: 429 LETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA-KIYDP-KLLR 486
+ T ++++ + G +E +FE L +SK + YN +I+ KA K+ D L
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 487 RMILGGARP 495
+ L G +P
Sbjct: 526 NLSLKGVKP 534
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 148/333 (44%), Gaps = 11/333 (3%)
Query: 143 LLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLT 202
L+YN ++ + +L K M G + + ++ LI + R + +LL+
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG-RWSDASRLLS 315
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-A 261
M K+ P V T++ L+ E L + + M R ++P+ ++Y L +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RTKSY 320
RL+ A + + V K + T + L+ + +E V+ + + V T +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 321 MLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKA 380
+ I+ + G + A+EI+ EM S ++ +N+++ CK+G ++KA +++ ++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 381 NGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFA 440
+ + TY + G K+G +E G L N ++ P + +++ F
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAG-------KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 441 EKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
KG E + LF+E+ + + YNTLI+A
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 187/448 (41%), Gaps = 76/448 (16%)
Query: 81 NRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHG----ISHGEKLFT-RV 135
N L +LK++ A+ + +++ RP+ P +++S L+ K++ IS GE++ +
Sbjct: 55 NGLSELKLDD-AVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112
Query: 136 PSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYP------------------ISH 177
P N Y+ L+ + + L+L + +M +LGY IS
Sbjct: 113 P---HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 178 LV-----------------FNRLI---ILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
V FN LI LH+ S L+ +M A P + TY
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM----ALIDRMVAKGCQPDLVTYG 225
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEP-----NEISYCILAYAHAVARLNTAAETYVE 272
+++ + + + M+ ++EP N I + Y H LN E +
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 273 AVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGR 329
+ ++ +S+L L YG + R+ S++ E P V T S + I+AF +
Sbjct: 286 GIRPNVV--TYSSLISCLCNYG---RWSDASRLLSDMIERKINPDVFTFSAL--IDAFVK 338
Query: 330 IGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAIT 389
G L AE+++ EM S+ ++S++ +C H +D+A ++++ M + C + +T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 390 YRQLALGCLKSGMEEQALKTL-ELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENV 448
Y L G K E+ ++ E+ +R + V T +++ + GD +
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV--------TYNILIQGLFQAGDCDMA 450
Query: 449 EKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+++F+E+ YNTL+ K
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 211 PHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYA-HAVARLNTAAET 269
P V TYN L+K +E M F M R + N ++Y IL + A E
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 270 YVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWSNIREL------PFVRTKSYM 321
+ E V + N ++TL L G N K LE+ L P + T Y
Sbjct: 454 FKEMVSDGVPPNIMTYNTL-----LDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYT--YN 505
Query: 322 LAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKA 380
+ IE + G +E +++ + S KG+K V +N+M++ +C+ G ++A L+K MK
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 381 NGCKANAITYRQLALGCLKSGMEEQA 406
+G N+ Y L L+ G E +
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREAS 590
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 31/294 (10%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L+ MK+ V + T+ IL++ + F+ M+ P++I++ I+ +
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS 232
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYL-------GNRKELERVWSNIREL 312
R + A+++ ++++ + +I+Y L G E E+V+ ++
Sbjct: 233 RKRRASEAQSFFDSLKDRFEPD--------VIVYTNLVRGWCRAGEISEAEKVFKEMKLA 284
Query: 313 ---PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVID 369
P V T Y + I+A R G + RA +++ +M + + FN++M V+ K G +
Sbjct: 285 GIEPNVYT--YSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 370 KAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLE--LGKRLPINKRVRNSTP 427
K ++Y MK GC+ + ITY L + E A+K L + K+ +N N
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN--- 399
Query: 428 WLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
+I +K DV +++ ++ ++K T YN L++ + +K D
Sbjct: 400 ------TIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTD 447
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 134/306 (43%), Gaps = 12/306 (3%)
Query: 156 GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVST 215
G+ ++ RM + G + F+ ++I + S R + +K D+ P V
Sbjct: 200 GLASEAVHCFNRMEDYGCVPDKIAFS-IVISNLSRKRRASEAQSFFDSLK-DRFEPDVIV 257
Query: 216 YNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAETYVEAV 274
Y L++ + + F MKL +EPN +Y I+ A +++ A + + + +
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 275 EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIGHL 333
+ S N T + L+ ++ G +++ +V++ +++L T +Y IEA R +L
Sbjct: 318 D-SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENL 376
Query: 334 ERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQL 393
E A ++ M K + FN++ K ++ A R+Y M C+ N +TY L
Sbjct: 377 ENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNIL 436
Query: 394 ALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFE 453
+ S + LK K+ +K V P + T +V +F G N KLF+
Sbjct: 437 MRMFVGSKSTDMVLKM----KKEMDDKEVE---PNVNTYRLLVTMFCGMGHWNNAYKLFK 489
Query: 454 ELHKSK 459
E+ + K
Sbjct: 490 EMVEEK 495
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 131/307 (42%), Gaps = 27/307 (8%)
Query: 107 PRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELL-YNNLVIACLDKGVIRLSLEYM 165
P ++ +S ++ ++ S + F + F+ +++ Y NLV G I + +
Sbjct: 219 PDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVF 278
Query: 166 KRMRELGYPISHLVFNRLIILHSSPSLRK-NMMPKLLTQMKADKVTPHVSTYNILMKIEA 224
K M+ G I V+ I++ + + + + M P+ T+N LM++
Sbjct: 279 KEMKLAG--IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 225 NEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH--------AVARLNTAAETYVEAVEK 276
E +++ ++ MK EP+ I+Y L AH AV LNT + E
Sbjct: 337 KAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV--- 393
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKEL---ERVWSNIRELPF-VRTKSYMLAIEAFGRIGH 332
N ST + + + Y+ ++++ R++S + E T +Y + + F
Sbjct: 394 -----NASTFNTI---FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
Query: 333 LERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
+ ++ EM+ + +V + ++T++C G + A +L+K M C +++ +
Sbjct: 446 TDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 393 LALGCLK 399
+ L L+
Sbjct: 506 MVLAQLR 512
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 145/344 (42%), Gaps = 21/344 (6%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQ- 203
YNNL+ AC G R +LE K+M + G + N I+L + S R+ K L+
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN--IVLSAYKSGRQ--YSKALSYF 139
Query: 204 --MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVE--PNEISYCILAYAHA 259
MK KV P +T+NI++ + + F+ M+ ++ E P+ +++ + + ++
Sbjct: 140 ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYS 199
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RTK 318
V EA+ N + + L+ Y G V +I++ +
Sbjct: 200 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 259
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
SY + ++GR +A+E++L M + +V +N+++ Y +G + +A +++ M
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL--SIV 436
+ +G K N ++ L C +S + L + IN L T S +
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN---------LNTAAYNSAI 370
Query: 437 EIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
+ ++E L++ + K K + + LI + Y
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 126/286 (44%), Gaps = 18/286 (6%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L+ M + P STYN L+ + N + M V P+ +++ I+ A+
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL-----PF 314
R + A +Y E ++ + + +T ++++ LG + +++++RE P
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 315 VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAAR 373
V T + ++ + + G +E ++ E A+GLK ++ +N++M Y HG+ A
Sbjct: 188 VVTFTSIMHL--YSVKGEIENCRAVF-EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 374 LYKNMKANGCKANAITYRQLALGCLKS-GMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
+ ++K NG + ++Y L L S G Q K K + + R P + T
Sbjct: 245 VLGDIKQNGIIPDVVSYTCL----LNSYGRSRQPGKA----KEVFLMMRKERRKPNVVTY 296
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK 478
++++ + G + ++F ++ + TL+ A +++K
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 170/443 (38%), Gaps = 68/443 (15%)
Query: 83 LRKLKMNKRALEVMEWVIRERP-YRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF-- 139
L KL + +AL++ + +R RP + ++ ++ + I + +F + +E
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 140 QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK 199
N + YN L+ A G+ +L + +++ G I +V ++ S + +
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI-IPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
+ M+ ++ P+V TYN L+ + L + F M+ ++PN +S C L A +
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 339
Query: 260 VAR------------------LNTAA-----ETYVEAVE------------KSMTGNNWS 284
++ LNTAA +Y+ A E K +
Sbjct: 340 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 285 TLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS-YMLAIEAFGRIGHLERAEEIWLEM 343
T +L+ + E + +L TK Y + A+ + G + AE I+ +M
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 344 ESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGME 403
+ A V + SM+ Y KA L+ M+ANG + ++I L K G
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
Query: 404 EQALKTLEL--GKRLPINKRV---------------------RNSTPWLET-----TLSI 435
++L K +P V + P+L + T +
Sbjct: 520 SNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQM 579
Query: 436 VEIFAEKGDVENVEKLFEELHKS 458
+ +F + G VE + KLF ++ S
Sbjct: 580 LHLFGKSGKVEAMMKLFYKIIAS 602
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 138/345 (40%), Gaps = 49/345 (14%)
Query: 141 NELLYNNLVIACLDKGV-IRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK 199
N + YN ++ AC G+ + ++ M+ G + FN L+ + S L +
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR-N 360
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L +M ++ V +YN L+ ++ + M ++++ PN +SY
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY-------- 412
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYG---YLGNRKELERVWSNIRELPFVR 316
T ++ K+ D L L+G YLG L+RV
Sbjct: 413 --------STVIDGFAKA------GRFDEALNLFGEMRYLG--IALDRV----------- 445
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYK 376
SY + + ++G E A +I EM S K V +N+++ Y K G D+ +++
Sbjct: 446 --SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 377 NMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIV 436
MK N +TY L G K G+ ++A++ K + V + +++
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS-------ALI 556
Query: 437 EIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
+ + G V + L +E+ K YN++I A+ ++ D
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 171/384 (44%), Gaps = 35/384 (9%)
Query: 116 VEFTTKLHG------ISHGEKLFTRV------PSEFQNELLYNNLVIACLDKGVIRLSLE 163
V F T L+G +S +L R+ P+ L N L CL+ G + ++
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL---CLN-GKVSDAVV 214
Query: 164 YMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIE 223
+ RM E G+ + + + ++ + S + + +LL +M+ + Y+I++
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCK-SGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 224 ANEHNLENLMRFFSLMKLRQVEPNEISYCIL--AYAHAVARLNTAAETYVEAVEKSMTGN 281
+ +L+N F+ M+++ + + I+Y L + +A R + A+ + +++ ++
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA-GRWDDGAKLLRDMIKRKIS-P 331
Query: 282 NWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RTKSYMLAIEAFGRIGHLERAEEIW 340
N T VL+ + G +E +++ + + T +Y I+ F + LE A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 341 LEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKS 400
M S + FN ++ YCK ID L++ M G AN +TY L G +S
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 401 GMEEQALKTLELGKRL---PINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHK 457
G LE+ K+L +++RVR P + + +++ + G++E ++F ++ K
Sbjct: 452 G-------KLEVAKKLFQEMVSRRVR---PDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 458 SKYCRYTFVYNTLIKAYAKAKIYD 481
SK +Y +I A D
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVD 525
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 143/325 (44%), Gaps = 10/325 (3%)
Query: 92 ALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYN-NLVI 150
AL ++ + + + P + ++ LV K + H ++ + E + +Y N VI
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 151 ACLDK-GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMM---PKLLTQMKA 206
+ L K G ++ ++E + +M + + +N LI S ++N + +L + +
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI----STLCKENQVEEATELARVLTS 393
Query: 207 DKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTA 266
+ P V T+N L++ N M F M+ + EP+E +Y +L +
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 267 AETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYMLAIE 325
A ++ +E S + T + L+ + +E E ++ + R +Y I+
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 326 AFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKA 385
+ +E A ++ +M +NS++T +C+ G I KAA + + M +NGC+
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 386 NAITYRQLALGCLKSGMEEQALKTL 410
+ +TY L G K+G E A K L
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLL 598
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 118/303 (38%), Gaps = 38/303 (12%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH-AVARLNTAA 267
+ P VST+N+L+K H L + M + P+E ++ + + L+ A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP-----FVRTKSYML 322
+ VE G +WS + V +I++G+ + +E + I+E+ F ++
Sbjct: 245 RIREQMVE---FGCSWSNVSVNVIVHGFCKEGR-VEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG 382
+ + GH++ A EI M V +NS+++ CK G + +A + M
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 383 CKANAITYRQLALGCLKSGMEEQA------------------LKTLELGKRLPINKRV-- 422
C N +TY L K E+A +L G L N RV
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 423 --------RNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY 474
+ P T +++ KG ++ + +++ S R YNTLI +
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 475 AKA 477
KA
Sbjct: 481 CKA 483
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 139/358 (38%), Gaps = 48/358 (13%)
Query: 139 FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP 198
F ++ +N LV G ++ ++E M M + GY +N +I K +
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV- 350
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
++L QM +P+ TYN L+ E+ +E ++ + + P+ ++ L
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 259 AVARLN-TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRT 317
+ R + A E + E K + ++
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFT--------------------------------- 437
Query: 318 KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKN 377
Y + I++ G L+ A + +ME + +SV +N+++ +CK +A ++
Sbjct: 438 --YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 378 MKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
M+ +G N++TY L G KS E A + ++ + P T S++
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD-------QMIMEGQKPDKYTYNSLLT 548
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFV-YNTLIKAYAKAKIYD--PKLLRRMILGG 492
F GD++ + + + S C V Y TLI KA + KLLR + + G
Sbjct: 549 HFCRGGDIKKAADIVQAM-TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/449 (18%), Positives = 181/449 (40%), Gaps = 68/449 (15%)
Query: 63 SWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVME--------WVIRERPYRPRELDYSY 114
WM D F ++ + F+ NR+ L ++ +L+++E W I+ P ++
Sbjct: 142 DWMIDEFGLKPDTHFY--NRMLNLLVDGNSLKLVEISHAKMSVWGIK-----PDVSTFNV 194
Query: 115 LVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELG 172
L++ + H + + +PS +E + ++ +++G + +L ++M E G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 173 YPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENL 232
S++ N ++ ++ + + D P T+N L+ ++++
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 233 MRFFSLMKLRQVEPNEISY-CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLI 291
+ +M +P+ +Y +++ + + A E + + + + N
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN---------- 364
Query: 292 LYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKS 351
T +Y I + +E A E+ + S L
Sbjct: 365 -------------------------TVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 352 VEQFNSMMTVYC---KHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
V FNS++ C H V A L++ M++ GC+ + TY L G ++AL
Sbjct: 400 VCTFNSLIQGLCLTRNHRV---AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 409 TLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYN 468
L K++ ++ R+ + T ++++ F + E++F+E+ R + YN
Sbjct: 457 ML---KQMELSGCARS----VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 469 TLIKAYAKA-KIYD-PKLLRRMILGGARP 495
TLI K+ ++ D +L+ +MI+ G +P
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 165/364 (45%), Gaps = 20/364 (5%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNM--MP 198
N +N ++ A G + + + M+ M+ G + + +N LI + M
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+L +M + V+P+++T+NIL+ + NL M+ F M + V+PN ISY L
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNR--KELERVWSNIRELPFV- 315
+ A + + + + N T + L + G+ N KE ++ +++ V
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNAL--INGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
T+ Y + I+A+ ++G ++ + EME + V +N ++ C++G I+ A +L+
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
+ + G + +T+ L G + G +A L+ ++ + R T +I
Sbjct: 460 DQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR--------HLTYNI 510
Query: 436 V-EIFAEKGDVENVEKLFEELHKSKYCRYTFV-YNTLIKAYA-KAKIYDPK-LLRRMILG 491
V + + ++G+++ + ++ K + R YN L++ Y+ K K+ D LL M+
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 492 GARP 495
G P
Sbjct: 571 GLVP 574
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 154/397 (38%), Gaps = 55/397 (13%)
Query: 121 KLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVF 180
++H I H + V N ++ + LV+A + L E KR GY +S L
Sbjct: 135 QVHSIFHAISMCDNV---CVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSC 191
Query: 181 NRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMK 240
L+I + R + + +M K+ P+V T+N+++ + MK
Sbjct: 192 KPLMIALLKEN-RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250
Query: 241 LRQVEPNEISYCILAYAHAVARLNTAAETY-VEAVEKSMTGN----NWSTLDVLLI---- 291
+ PN +SY L + +L + Y +AV K M N N +T ++L+
Sbjct: 251 VYGCSPNVVSYNTLIDGY--CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 292 ---LYGYLGNRKEL--ERVWSN----------------IRELPFVRTK-----------S 319
L G + KE+ + V N I E +R K +
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y I F + L+ A +++ ++ + + +N ++ YCK G ID L + M+
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIF 439
G + TY L G ++G +E K+L ++ P L T ++E +
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNG-------NIEAAKKL-FDQLTSKGLPDLVTFHILMEGY 480
Query: 440 AEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
KG+ L +E+ K YN ++K Y K
Sbjct: 481 CRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 28/218 (12%)
Query: 302 LERVWSNIRELPFVRTKSYMLAIEAFGRIGHL----------------------ERAEEI 339
+ + +++ L + + L EAF R G+ E +
Sbjct: 151 VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYV 210
Query: 340 WLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLK 399
+ EM K +V FN ++ CK G ++KA + ++MK GC N ++Y L G K
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 400 SGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSK 459
G + K + K + N + +P L T +++ F + ++ K+F+E+
Sbjct: 271 LGGNGKMYKADAVLKEMVEN----DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 460 YCRYTFVYNTLIKAYAK-AKIYDPKLLR-RMILGGARP 495
YN+LI KI + +R +M+ G +P
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 25/328 (7%)
Query: 156 GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVST 215
G + +LE+ K+M LG S VF+ I+ +K+ L + +V
Sbjct: 388 GEMEKALEFYKKMEVLGLTPS--VFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFV 445
Query: 216 YNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR-LNTAAETYVEAV 274
N ++ + + S M+ R + PN +SY + H + ++ A + +
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505
Query: 275 EKSMTGNNWSTLDVLLILYGYLGNRKE---LERV----WSNIRELPFVRTKSYMLAIEAF 327
EK + NN++ +++ G N E LE V SNI V Y I
Sbjct: 506 EKGLKPNNYT---YSILIDGCFRNHDEQNALEVVNHMTSSNIE----VNGVVYQTIINGL 558
Query: 328 GRIGHLERAEEIWLEMESAKGL-KSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKAN 386
++G +A E+ M K L S +NS++ + K G +D A Y+ M NG N
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 387 AITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVE 446
ITY L G K+ +QAL+ + K NK V+ P ++++ F ++ ++E
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMK----NKGVKLDIPAYG---ALIDGFCKRSNME 671
Query: 447 NVEKLFEELHKSKYCRYTFVYNTLIKAY 474
+ LF EL + +YN+LI +
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 138/342 (40%), Gaps = 18/342 (5%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKL 200
+ LLY+ V AC + ++ ++ M+E + +IL S + +L
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
+M +D ++ +V L+ ++L + + F M+ PN +++ +L
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF-- 384
Query: 261 ARLNTAAETYVEAVEK-SMTGNNWSTLDVLLILYGYLGNRKELE--RVWSNIRELPFVRT 317
R N E +E +K + G S V I+ G+L +K E +++ E
Sbjct: 385 -RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 443
Query: 318 KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKN 377
+ + G + A E+ +MES +V +N++M +C+ +D A ++ N
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 378 MKANGCKANAITYRQLALGCLKSGMEEQALKTLE--LGKRLPINKRVRNSTPWLETTLSI 435
+ G K N TY L GC ++ E+ AL+ + + +N V +I
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ---------TI 554
Query: 436 VEIFAEKGDVENVEKLFEEL-HKSKYCRYTFVYNTLIKAYAK 476
+ + G +L + + + C YN++I + K
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 143/345 (41%), Gaps = 16/345 (4%)
Query: 79 AINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE 138
IN L K +RA EV ++R P Y L+ K + EK+F+ + S
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 139 --FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNM 196
+ + +++++ G + +L Y ++E G ++++ LI RK M
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI----QGYCRKGM 425
Query: 197 MP---KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCI 253
+ L +M V TYN ++ L + F+ M R + P+ + I
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 254 LAYAHA-VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
L H + L A E + + EK + + T + LL +G +G+ + +W+++
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIR-LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 313 PFVRTK-SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
+ T SY + + A GHL A +W EM S +V NSM+ YC+ G
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRL 416
+ M + G + I+Y L G ++ EE K L K++
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVR---EENMSKAFGLVKKM 646
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 129/287 (44%), Gaps = 16/287 (5%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAH 258
L+Q++ V P + TYN L+ +++ +E + M + P +Y ++
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---LPFV 315
+ A E + E + ++ ++ +T LL+ G+ E E+V+S++R +P +
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDS-TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
S M+++ F R G+L++A + ++ A + + ++ YC+ G+I A L
Sbjct: 376 VCFSSMMSL--FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTL-ELGKRLPINKRVRNSTPWLETTLS 434
M GC + +TY + G K M +A K E+ +R P T
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF--------PDSYTLTI 485
Query: 435 IVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
+++ + G+++N +LF+++ + + YNTL+ + K D
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 152/370 (41%), Gaps = 48/370 (12%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI---ILHS---------SPSL 192
YN L+ A KG++ + E M M G+ +N +I H + L
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 193 RKNMMP----------------------KLLTQMKADKVTPHVSTYNILMKIEANEHNLE 230
R + P K+ + M++ V P + ++ +M + NL+
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 231 NLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLL 290
+ +F+ +K + P+ + Y IL + + + A + + + T +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT-- 450
Query: 291 ILYGYLGNRK---ELERVWSNIRELP-FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESA 346
IL+G L RK E +++++ + E F + + + I+ ++G+L+ A E++ +M+
Sbjct: 451 ILHG-LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 347 KGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA 406
+ V +N+++ + K G ID A ++ +M + I+Y L G +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 407 LKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFV 466
+ + I+K ++ P + S+++ + G+ + E E++ +
Sbjct: 570 FRVWDE----MISKNIK---PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 467 YNTLIKAYAK 476
YNTLI + +
Sbjct: 623 YNTLIYGFVR 632
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 272 EAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---LPFVRTKSYMLAIEAFG 328
+ + +S G N TL++++ G +++ S ++E P + T Y I A+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT--YNTLISAYS 281
Query: 329 RIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAI 388
G +E A E+ M V +N+++ CKHG ++A ++ M +G ++
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 389 TYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENV 448
TYR L + K G + K + R R+ P L S++ +F G+++
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFS-------DMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 449 EKLFEELHKSKYCRYTFVYNTLIKAYAK 476
F + ++ +Y LI+ Y +
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCR 422
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 158/335 (47%), Gaps = 9/335 (2%)
Query: 46 RRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPY 105
R + L + + L W + G V + V I +LR + +AL+V EW+ +E+
Sbjct: 41 RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100
Query: 106 RPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLV--IACLDKGVIRLSLE 163
D++ + + G+ EK F +P + + +Y +L+ A DK + +
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160
Query: 164 YMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIE 223
+ K MR+LG + + +N ++ L+S+ R+ + +LL +MK + V T N ++K+
Sbjct: 161 FQK-MRDLGLLLRPVPYNAMMSLYSALKNREK-VEELLLEMKDNDVEADNVTVNNVLKLY 218
Query: 224 ANEHNLENLMRFFSLMK-LRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNN 282
+ ++ + +F + + + ++ + +A A+ AR + A + E+ + +
Sbjct: 219 SAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKS 278
Query: 283 W-STLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS-YMLAIEAFGRIGHLERAEEIW 340
S D L+ LYG GNR+E+ RVW + R + Y I + ++ + AEEI+
Sbjct: 279 LKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIY 338
Query: 341 LEMESAKGLKSVEQFNSMM-TVYCKHGVIDKAARL 374
ES L+ + +M+ + Y G+ +KA +L
Sbjct: 339 KVWESLP-LEFDHRIPTMLASGYRDRGMTEKAEKL 372
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 159/392 (40%), Gaps = 35/392 (8%)
Query: 105 YRPRELDYSYLVEFTTKLHGISHGEKLFTRV------PSEFQNELLYNNLVIACLDKGVI 158
Y P + +S LV +S L R+ P L N L CL KG +
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL---CL-KGRV 191
Query: 159 RLSLEYMKRMRELGYPISHL----VFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
+L + RM E G+ + V NRL S + L +M+ + V
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRL-----CKSGNSALALDLFRKMEERNIKASVV 246
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAETYVEA 273
Y+I++ + + ++ + F+ M+++ ++ + ++Y L + + A+ E
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 274 VEKSMTGN--NWSTLDVLLILYGYLGNRKEL--ERVWSNIRELPFVRTKSYMLAIEAFGR 329
+ +++ + +S L + + G L KEL E + I T +Y I+ F +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP----DTITYNSLIDGFCK 362
Query: 330 IGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAIT 389
L A +++ M S + ++ ++ YCK +D RL++ + + G N IT
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 390 YRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVE 449
Y L LG +SG L K L R P + T +++ + G++
Sbjct: 423 YNTLVLGFCQSG-------KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 450 KLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
++FE++ KS+ +YN +I A D
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+L +M + P TYN L+ E+ L + F LM + EP+ ++Y IL ++
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 259 AVA-RLNTAAETYVEAVEKSMTGNN--WSTLDVLLILYGYLGNRKELERVWSNIRELPFV 315
A R++ + E K + N ++TL + G L KEL + + P V
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
T Y + ++ G L +A EI+ +M+ ++ + +N ++ C +D A L+
Sbjct: 456 VT--YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQA 406
++ G K + +TY + G K G +A
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 31/351 (8%)
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLIILHS---SPSLRKNMMPKLLTQMKADKVTPHVS 214
I L LE +RM + G I+ V++ I++ + K+ KL+ + + P
Sbjct: 205 IDLCLEIFRRMVDSGVKIT--VYSLTIVVEGLCRRGEVEKS--KKLIKEFSVKGIKPEAY 260
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCIL-AYAHAVARLNTAAETYVEA 273
TYN ++ + + + +MK V N+++Y +L + +++ A + + E
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP----FVRTKSYMLAIEAFGR 329
E+ + S + V L + + ++R + EL + +Y I+ +
Sbjct: 321 RERGIE----SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 330 IGHLERAEEIWLEMESAKGLKSVEQ-FNSMMTVYCKHGVIDKAARLYKNMKANGCKANAI 388
+G + AE + EM+S KG+ + FN+++ YC+ G++D+A+ +Y M+ G +A+
Sbjct: 377 VGEMGAAEILMNEMQS-KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 389 TYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT--LSIVEIFAEKGDVE 446
T +A C LK + K+ R+ L T ++++++ ++G+VE
Sbjct: 436 TCNTIA-SCF------NRLKRYDEAKQWLF--RMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 447 NVEKLFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDPKLLR-RMILGGARP 495
++LF E+ YN +I AY K KI + + LR M G P
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 11/159 (6%)
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLY 375
T SY I+ + + G++E A+ +++EM S+KG++ + +N M+ YCK G I +A +L
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEM-SSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 376 KNMKANGCKANAITYRQLALG-CLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS 434
NM+ANG ++ TY L G C+ ++E + L + + +NS +
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDE----AMRLFSEMGLKGLDQNSVTY----TV 579
Query: 435 IVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
++ ++ G + L++E+ + Y VY LI +
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 186/441 (42%), Gaps = 62/441 (14%)
Query: 81 NRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHG----ISHGEKLFTRVP 136
N L LK+++ A+++ +++ RP+ P +++S L+ K+ IS GEK+ +
Sbjct: 39 NALLHLKLDE-AVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKM--EIL 94
Query: 137 SEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRK 194
N YN ++ + + +L + +M +LGY S + N L+ H + R
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN---RI 151
Query: 195 NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY--- 251
+ L+ QM P T+ L+ + + M ++ +P+ ++Y
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 252 ----C-----------------------ILAYAHAVARL------NTAAETYVEAVEKSM 278
C ++ Y+ + L + A + E K +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 279 TGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGRIGHLER 335
+ ++ ++ L Y G + R+ S++ E P V T + + I+AF + G L
Sbjct: 272 RPDVFTYSSLISCLCNY-GRWSDASRLLSDMLERKINPNVVTFNSL--IDAFAKEGKLIE 328
Query: 336 AEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLAL 395
AE+++ EM ++ +NS++ +C H +D+A +++ M + C + +TY L
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 396 GCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEEL 455
G K+ ++ + +EL + + V N+ + TTL + F + D +N + +F+++
Sbjct: 389 GFCKA---KKVVDGMELFRDMSRRGLVGNTVTY--TTL--IHGFFQASDCDNAQMVFKQM 441
Query: 456 HKSKYCRYTFVYNTLIKAYAK 476
YNTL+ K
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCK 462
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 132/282 (46%), Gaps = 18/282 (6%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+LL+ M K+ P+V T+N L+ A E L + F M R ++PN ++Y L
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 259 AV-ARLNTAAETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELE--RVWSNIRELP 313
+ RL+ A + + V K + ++TL + G+ +K ++ ++ ++
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL-----INGFCKAKKVVDGMELFRDMSRRG 410
Query: 314 FV-RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAA 372
V T +Y I F + + A+ ++ +M S ++ +N+++ CK+G ++KA
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
+++ ++ + + + TY ++ G K+G +E G L + ++ P +
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAG-------KVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY 474
+++ F +KG E LF ++ + + YNTLI+A+
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 160/406 (39%), Gaps = 62/406 (15%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGI------SHGEKLFTR-VPSEFQNELLYNNLVIACLD 154
E Y+P V FTT +HG+ S L R V Q +L+ VI L
Sbjct: 163 EMGYQPDT------VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 155 K-GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHV 213
K G L+L + +M E G + +V +I + L T+M + P V
Sbjct: 217 KRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 214 STYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVE 272
TY+ L+ N + R S M R++ PN +++ L A A +L A + + E
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 273 AVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGH 332
+++S+ N ++ Y L I F
Sbjct: 336 MIQRSIDPN--------IVTYNSL---------------------------INGFCMHDR 360
Query: 333 LERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
L+ A++I+ M S L V +N+++ +CK + L+++M G N +TY
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 393 LALGCLKSGMEEQALKTLELGKRLPINKRVRNST-PWLETTLSIVEIFAEKGDVENVEKL 451
L G ++ + A ++ + V + P + T ++++ + G +E +
Sbjct: 421 LIHGFFQASDCDNA--------QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 452 FEELHKSKYCRYTFVYNTLIKAYAKA-KIYDP-KLLRRMILGGARP 495
FE L KSK + YN + + KA K+ D L + L G +P
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/429 (19%), Positives = 187/429 (43%), Gaps = 50/429 (11%)
Query: 90 KRALEVMEWVIRERPYRPRELDYSYLVE--FTTKLHGISHGEKLFTRVPSEFQNELLYNN 147
+R+L +++WV E Y P Y+ ++ K I+HG R + + Y+
Sbjct: 136 QRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYST 195
Query: 148 LVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKAD 207
L+ + +G+ +L ++++M + ++++ LI L S + + +++K
Sbjct: 196 LITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL-SRRLCDYSKAISIFSRLKRS 254
Query: 208 KVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAA 267
+TP + YN ++ + M V PN +SY L + A
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAI 324
+ +++ + +T ++++ +YG L KE +R++ ++R++ P V + + +L +
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV 374
Query: 325 ----EAFGRIGHL-----------------------------ERAEEIWLEMESAKGLKS 351
E FG HL E+A + EM+S +
Sbjct: 375 YGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Query: 352 VEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
++++++++ K G +D+AA L++ ++++G + + + Y+ + + + G+ A
Sbjct: 435 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA----- 489
Query: 412 LGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLI 471
KRL ++ ++ P ET ++I+ A+ G E +F + +S + V+ +I
Sbjct: 490 --KRLLHELKLPDNIP-RETAITIL---AKAGRTEEATWVFRQAFESGEVKDISVFGCMI 543
Query: 472 KAYAKAKIY 480
Y++ + Y
Sbjct: 544 NLYSRNQRY 552
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 14/256 (5%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGY-PISHLVFNRLIILHSSPSLRK-NMMPKLLT 202
+N L+ C + G+ R +E + + Y P H +N ILHS +++ ++ +
Sbjct: 190 FNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKH-SYN--AILHSLLGVKQYKLIDWVYE 246
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA--- 259
QM D TP V TYNI+M + L R M P+ +Y IL + A
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 260 --VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRT 317
+A LN VE + +++TL L G L K + P V
Sbjct: 307 KPLAALNLLNHMREVGVEPGVI--HFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV- 363
Query: 318 KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKN 377
Y + I + G LE+AEE++ EM L +V +NSM+ +C G +A L K
Sbjct: 364 -CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE 422
Query: 378 MKANGCKANAITYRQL 393
M++ GC N + Y L
Sbjct: 423 MESRGCNPNFVVYSTL 438
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 11/285 (3%)
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR-LNTAAETYVEA 273
T+NIL++ E + +M EP+ ++Y L + LN A+E + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYMLAIEAFGRIGH 332
S+ + T ++ Y G +E + ++ L T ++ + ++ + + G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 333 LERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
+ AEEI +M S V F S++ YC+ G + + RL++ M A G NA TY
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 393 LALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLF 452
L E + LK EL +L + P++ +++ F + G V +
Sbjct: 388 LINALCN---ENRLLKARELLGQLASKDII--PQPFMYN--PVIDGFCKAGKVNEANVIV 440
Query: 453 EELHKSKYCRYTFVYNTLIKAYA-KAKIYDP-KLLRRMILGGARP 495
EE+ K K + LI + K ++++ + +M+ G P
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 52/299 (17%)
Query: 215 TYNILMK--IEANEHNLENLMRFFSLMKLRQVEPNE--ISYCILAYAHAVARLNTAAETY 270
TYN+L + +A H+L M F MK V PN + + + ++A +L+ A
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQM--FECMKSDGVSPNNRLLGFLVSSFAEK-GKLHFATALL 161
Query: 271 VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWS-------NIRELPFVRTKSYMLA 323
+++ E +++ L +L+RV ++R TK++ +
Sbjct: 162 LQSFEVE---------GCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG- 382
I +G E+A E+ M + +N+++ +CK ++KA+ ++K++K+
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 383 CKANAITYRQLALGCLKSGMEEQALKTLELGKRL---PIN-------------------K 420
C + +TY + G K+G +A L+ RL P N +
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 421 RVRNST------PWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
+R P + T S+++ + G V +L+EE++ F Y+ LI A
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 11/285 (3%)
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR-LNTAAETYVEA 273
T+NIL++ E + +M EP+ ++Y L + LN A+E + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYMLAIEAFGRIGH 332
S+ + T ++ Y G +E + ++ L T ++ + ++ + + G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 333 LERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
+ AEEI +M S V F S++ YC+ G + + RL++ M A G NA TY
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 393 LALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLF 452
L E + LK EL +L + P++ +++ F + G V +
Sbjct: 388 LINALCN---ENRLLKARELLGQLASKDII--PQPFMYN--PVIDGFCKAGKVNEANVIV 440
Query: 453 EELHKSKYCRYTFVYNTLIKAYA-KAKIYDP-KLLRRMILGGARP 495
EE+ K K + LI + K ++++ + +M+ G P
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 52/299 (17%)
Query: 215 TYNILMK--IEANEHNLENLMRFFSLMKLRQVEPNE--ISYCILAYAHAVARLNTAAETY 270
TYN+L + +A H+L M F MK V PN + + + ++A +L+ A
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQM--FECMKSDGVSPNNRLLGFLVSSFAEK-GKLHFATALL 161
Query: 271 VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWS-------NIRELPFVRTKSYMLA 323
+++ E +++ L +L+RV ++R TK++ +
Sbjct: 162 LQSFEVE---------GCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG- 382
I +G E+A E+ M + +N+++ +CK ++KA+ ++K++K+
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 383 CKANAITYRQLALGCLKSGMEEQALKTLELGKRL---PIN-------------------K 420
C + +TY + G K+G +A L+ RL P N +
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 421 RVRNST------PWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
+R P + T S+++ + G V +L+EE++ F Y+ LI A
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 16/292 (5%)
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA- 261
+MK + + P + TYN LM + +++ R F +M+ +++P+ ++Y + + A
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSY 320
+ A E + + + + + ++ Y + ++ + E V ++
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYAD-SDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 321 MLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKA 380
L I + G L ++ M +V + ++ Y K G ++ A RL M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 381 NGCKANAITYRQLALGCLKSGMEEQALKTLELGK--RLPINKRVRNSTPWLETTLSIVEI 438
G K + +TY + G K+G E+AL + L IN +S +++
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS---------LIDG 441
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRM 488
+ G V+ E+LFEE+ + R ++ YN LI A+ K + D L +RM
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 36/257 (14%)
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
+LA A V R+ + + ++ E MT S + L+ +G LG +EL VW ++E
Sbjct: 161 VLALAKDVDRIRFVS-SEIKKFEFPMT---VSAANALIKSFGKLGMVEELLWVWRKMKEN 216
Query: 313 PFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
T +Y + ++ AE ++ MES + + +N+M+ YCK G KA
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 372 ARLYKNMKANGCKANAITYRQLALGC-----------LKSGMEEQALKTLELGKRLPINK 420
++M+ G +A+ ITY + C L M+E+ ++ L I
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 421 RVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
+ L ++ E KG NV +Y LI YAK+
Sbjct: 337 LCKEGK--LNEGYTVFENMIRKGSKPNVA----------------IYTVLIDGYAKSGSV 378
Query: 481 DP--KLLRRMILGGARP 495
+ +LL RMI G +P
Sbjct: 379 EDAIRLLHRMIDEGFKP 395
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 147/357 (41%), Gaps = 24/357 (6%)
Query: 69 FPVRSNDVFHAINRLRKLKMNKRALEVMEWV---IRERPYRPRELDYSYLVEFTTKLHGI 125
FP+ + I KL M +E + WV ++E P Y++L+ +
Sbjct: 183 FPMTVSAANALIKSFGKLGM----VEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 238
Query: 126 SHGEKLFTRVPS-EFQNELL-YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRL 183
E++F + S + +++ YN ++ G + ++E ++ M G+ + + +
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 184 IILHSSPSLRKNMMPKLLTQM--KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKL 241
I + S + + L +M K +V PH +++++ E L F M
Sbjct: 299 IQACYADSDFGSCVA-LYQEMDEKGIQVPPH--AFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 242 RQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMT-GNNWSTLDVLLILYGYLGNRK 300
+ +PN Y +L +A + + E + + + + G + +++ G N +
Sbjct: 356 KGSKPNVAIYTVLIDGYAKS---GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 301 ELERVWSNIRELPF----VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFN 356
+E F + + Y I+ G+ G ++ AE ++ EM + +N
Sbjct: 413 -VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 357 SMMTVYCKHGVIDKAARLYKNM-KANGCKANAITYRQLALGCLKSGMEEQALKTLEL 412
+++ + KH +D+A L+K M + GC TY L G K E+ALK ++
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 29/340 (8%)
Query: 141 NELLYNNLVIACLDKGVI---RLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMM 197
NE++YN ++ KG + R+ +E M++ G HL +N LI +N
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ---GMKPDHLAYNCLIRRFCELGEMENA- 443
Query: 198 PKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYA 257
K + +MK V+P V TYNIL+ ++ + M+ PN +SY L
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI-- 501
Query: 258 HAVARLNTAAETYVEAVEKSMTGNNWST-LDVLLILYGYLGNRKELERVWSNIREL---- 312
+ + + + E + V++ M S + + +L ++ ++E + +E+
Sbjct: 502 NCLCKGSKLLEAQI--VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 313 PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKA 371
+ +Y I+ G L AE++ LE+ S KGLK V +NS+++ Y G + +
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEI-SRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLET 431
LY+ MK +G K TY L C K G +EL +RL ++ P L
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLISLCTKEG--------IELTERLFGEMSLK---PDLLV 667
Query: 432 TLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLI 471
++ +A GD+E L +++ + YN+LI
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 163/398 (40%), Gaps = 59/398 (14%)
Query: 100 IRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKGV 157
I E +RP + Y ++ KL + G +LF R+ + + + +YN ++I L KG
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYN-VLIDGLCKG- 227
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
KRM N +L +M A ++ P + TYN
Sbjct: 228 --------KRM--------------------------NDAEQLFDEMLARRLLPSLITYN 253
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKS 277
L+ N E + MK +EP+ I++ L A + AE ++ ++
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 278 MTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF---VRTKSYMLAI--EAFGRIGH 332
+ T +L GY N K + E V+ +Y +I A + G
Sbjct: 314 GFVPDAFTFSIL--FDGYSSNEK--AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 333 LERAEEIWLEMESAKGLKSVEQ-FNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYR 391
+E+AEEI L E AKGL E +N+M+ YC+ G + A + M+ G K + + Y
Sbjct: 370 IEKAEEI-LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 392 QLALGCLKSGMEEQALKTLELGKRLPINK-RVRNSTPWLETTLSIVEIFAEKGDVENVEK 450
L + G E A K +NK +++ +P +ET ++ + K + +
Sbjct: 429 CLIRRFCELGEMENAEKE--------VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 451 LFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDPKLLRR 487
+ +E+ + Y TLI K +K+ + ++++R
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 137/340 (40%), Gaps = 17/340 (5%)
Query: 143 LLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLT 202
+ +N L+ G++ + +K M++LG+ F+ L +SS + + T
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR 262
+ + V + T +IL+ E +E + + PNE+ Y + +
Sbjct: 345 AVDSG-VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 263 LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR---ELPFVRTKS 319
A +EA+EK + + L+ + LG + E+ + ++ P V T
Sbjct: 404 DLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET-- 461
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y + I +GR ++ +I EME + +V + +++ CK + +A + ++M+
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLE--LGKRLPINKRVRNSTPWLETTLSIVE 437
G Y L GC G E A + + L K + +N L T ++++
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN---------LVTYNTLID 572
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+ G + E L E+ + F YN+LI Y A
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 161/376 (42%), Gaps = 31/376 (8%)
Query: 32 LCTESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKR 91
LC E + + + R ++ KG + + M DG+ R D+ A R++ M K+
Sbjct: 364 LCKEGKIEKAEEILGR--EMAKGLVPNEVIYNTMIDGY-CRKGDLVGA--RMKIEAMEKQ 418
Query: 92 ALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELL--YNNLV 149
+ +P L Y+ L+ +L + + EK ++ + + + YN L+
Sbjct: 419 GM------------KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 150 IACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRKNMMPKLLTQMKAD 207
K + +K M + G + + + LI + S L ++ + M+
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR---DMEDR 523
Query: 208 KVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTA 266
V+P V YN+L+ ++ +E+ RF M + +E N ++Y L ++ +L+ A
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 267 AETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRT-KSYMLAIE 325
+ +E K + + + T + L+ YG+ GN + ++ ++ T K+Y L I
Sbjct: 584 EDLLLEISRKGLKPDVF-TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 326 AFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKA 385
+ G +E E ++ EM L +N ++ Y HG ++KA L K M
Sbjct: 643 LCTKEG-IELTERLFGEMSLKPDLLV---YNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 386 NAITYRQLALGCLKSG 401
+ TY L LG LK G
Sbjct: 699 DKTTYNSLILGQLKVG 714
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 18/304 (5%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+L +MK D++ P V YN+L+ + + + F M R++ P+ I+Y L +
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK 318
A + E ++ + T + LL G ++ E V +++L FV
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PD 318
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESA--KGLK-SVEQFNSMMTVYCKHGVIDKAARLY 375
++ +I F E+AE E+A G+K + + ++ CK G I+KA +
Sbjct: 319 AFTFSI-LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 376 KNMKANGCKANAITYRQLALG-CLKSGMEEQALKTLELGKRLPINKRVRNST-PWLETTL 433
A G N + Y + G C K + +G R+ I + P
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDL---------VGARMKIEAMEKQGMKPDHLAYN 428
Query: 434 SIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILG 491
++ F E G++EN EK ++ YN LI Y + +D +L+ M
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 492 GARP 495
G P
Sbjct: 489 GTMP 492
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 198/481 (41%), Gaps = 59/481 (12%)
Query: 35 ESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALE 94
E +QT +++C +E P G + L + P I LR+LK RA+E
Sbjct: 30 EGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPE------FVIGVLRRLKDVNRAIE 83
Query: 95 VMEWVIR--ERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRV------PSEFQNELLYN 146
W R E P+ P Y+ L+ + +++ + PS N +
Sbjct: 84 YFRWYERRTELPHCPES--YNSLLLVMARCRNFDALDQILGEMSVAGFGPS--VNTCI-- 137
Query: 147 NLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKA 206
+V+ C+ +R + ++ MR+ + + + LI S+ + +MM L QM+
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN-HSDMMLTLFQQMQE 196
Query: 207 DKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY--CILAYAHAVARLN 264
P V + L++ A E +++ + MK ++ + + Y CI ++ V +++
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK-VGKVD 255
Query: 265 TAAETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYML 322
A + + E + + ++++ +L L E+ R +P T +Y
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC--TYAYNT 313
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKG-LKSVEQFNSMMTVYCKHGVIDKAARLYKNMKAN 381
I +G G + A + LE + AKG + SV +N ++T K G +D+A ++++ MK +
Sbjct: 314 MIMGYGSAGKFDEAYSL-LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Query: 382 GCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRN----------------- 424
N TY L ++G + A + + ++ + VR
Sbjct: 373 A-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 425 -----------STPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
TP T S+++ + G V++ K++E++ S + VY +LIK
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 474 Y 474
+
Sbjct: 492 F 492
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/456 (18%), Positives = 169/456 (37%), Gaps = 90/456 (19%)
Query: 100 IRERPYRPRELDYSYLVEFTTKLHGISHGEKLFT------RVPSEFQNELLYNNLVIACL 153
I +P E+ Y+ ++ K + + ++F RVP + YN +++
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA----YNTMIMGYG 319
Query: 154 DKGVIRLSLEYMKRMRELGYPISHLVFNRLII-----------LHSSPSLRKNMMPKLLT 202
G + ++R R G S + +N ++ L ++K+ P L T
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST 379
Query: 203 ----------------------QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMK 240
M+ + P+V T NI++ L+ F M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 241 LRQVEPNEISYCILAYAHA-VARLNTAAETYVEAVEKSMTGN------------------ 281
+ P+EI++C L V R++ A + Y + ++ N
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 282 ----------NWSTLDVLLILYGYL------GNRKELERVWSNIRELPFV-RTKSYMLAI 324
N + L +L Y+ G ++ ++ I+ FV +SY + I
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 325 EAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCK 384
+ G E++ M+ + +N ++ +CK G ++KA +L + MK G +
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 385 ANAITYRQLALGCLKSGMEEQALKTLELG--KRLPINKRVRNSTPWLETTLSIVEIFAEK 442
+TY + G K ++A E KR+ +N + + S+++ F +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS---------SLIDGFGKV 670
Query: 443 GDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK 478
G ++ + EEL + + +N+L+ A KA+
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 10/284 (3%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
Y+ L+ + G + E M+E G + +N ++I + N +LL +M
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN-IVIDGFCKCGKVNKAYQLLEEM 613
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARL 263
K P V TY ++ A L+ F K +++E N + Y L V R+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 264 NTAAETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SY 320
+ A E ++K +T N W++L L+ + E + +++EL + +Y
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI---NEALVCFQSMKELKCTPNQVTY 730
Query: 321 MLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKA 380
+ I ++ +A W EM+ S + +M++ K G I +A L+ KA
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 381 NGCKANAITYRQLALGCLKSGMEEQALKTLELGKR--LPINKRV 422
NG ++ Y + G A E +R LPI+ +
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKT 834
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 9/179 (5%)
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y I AF + H + ++ +M+ +V F +++ + K G +D A L M
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
K++ A+ + Y K G + A K P T S++ +
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH-------EIEANGLKPDEVTYTSMIGV 282
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+ ++ ++FE L K++ T+ YNT+I Y A +D LL R G+ P
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 113/275 (41%), Gaps = 10/275 (3%)
Query: 206 ADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNT 265
A++ P VS YN L+ EH+ + M + + PN ISY L +
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 266 AAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSN-IRELPF-VRTKSYMLA 323
A +++ + K N TL L+ G + +W+ IR +Y
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
++ F G++ +A ++ ME ++ + S++ + K G +D A ++ M +GC
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKG 443
N + Y + + ++A +E+ + N P + T + ++ + G
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSK-------ENCAPSVPTFNAFIKGLCDAG 471
Query: 444 DVENVEKLFEELHKSKYCRYTFV-YNTLIKAYAKA 477
++ EK+F ++ + C V YN L+ AKA
Sbjct: 472 RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 175/455 (38%), Gaps = 77/455 (16%)
Query: 77 FHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVP 136
F +I K EVM IR+ + YL++ KL G E LF V
Sbjct: 63 FKSIANSNLFKHTPLTFEVM---IRKLAMDGQVDSVQYLLQ-QMKLQGFHCSEDLFISVI 118
Query: 137 SEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNM 196
S ++ G+ ++E R++E G S ++N ++ + R M
Sbjct: 119 SVYRQ-------------VGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN-RIQM 164
Query: 197 MPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILA- 255
+ + MK D P+V TYN+L+K + ++ + M + P+ +SY +
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 256 -----------------YAHAVARLNT-------------AAETYVEAVEKSMTGN--NW 283
+ V+ N A E E VEK ++ N ++
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 284 STLDVLLILYGYLGNRKELERVWSNIREL------PFVRTKSYMLAIEAFGRIGHLERAE 337
ST L L N ++E +S + ++ P + T S ++ F R G A
Sbjct: 285 ST------LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK-GCFLR-GTTFDAL 336
Query: 338 EIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALG 396
++W +M GL+ +V +N+++ +C HG I KA ++ +M+ GC N TY L G
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 397 CLKSGMEEQALKTLELGKRLPINKRVRNS-TPWLETTLSIVEIFAEKGDVENVEKLFEEL 455
K G + A+ NK + + P + ++VE + E L E +
Sbjct: 397 FAKRGSLDGAVYIW--------NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 456 HKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRM 488
K +N IK A D K+ R+M
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 143/329 (43%), Gaps = 4/329 (1%)
Query: 75 DVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
D + A L+++ AL W+ R+ ++ Y+ +V + KL
Sbjct: 325 DAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDE 384
Query: 135 VPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSL 192
+ + N + YN L+ + ++ ++ +M+E G + + LI +H+
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
M + +M+ ++P TY++++ +L R F M + PN +++
Sbjct: 445 LDIAM-DMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
I+ HA AR A ++ + + T +++ + G+ G +E E V++ ++
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 313 PFVRTKS-YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
+V + Y L ++ +G+ G++++A + + M A +V NS+++ + + + +A
Sbjct: 564 NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEA 623
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKS 400
L ++M A G + TY L C +
Sbjct: 624 YNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 109/300 (36%), Gaps = 80/300 (26%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
KLL +M D P+ TYN L+ + L+ M F+ M+ EP+ ++YC L H
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 259 AVAR-LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRT 317
A A L+ A + Y E ++ + T
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPD-----------------------------------T 464
Query: 318 KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKN 377
+Y + I G+ GHL A ++ EM ++ FN M+ ++ K + A +LY++
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 378 MKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
M+ G + + +TY ++E
Sbjct: 525 MQNAGFQPDKVTYS------------------------------------------IVME 542
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+ G +E E +F E+ + + VY L+ + KA D + + M+ G RP
Sbjct: 543 VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRP 602
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 12/277 (4%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKL 200
N ++Y L+ L ++ +K M+E G +N LII S + R +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII-GLSKAKRMDEARSF 509
Query: 201 LTQMKADKVTPHVSTYNILMK--IEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
L +M + + P+ TY + IEA+E + ++ M+ V PN++ L +
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASAD--KYVKEMRECGVLPNKVLCTGLINEY 567
Query: 259 AV-ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRK--ELERVWSNIRELPFV 315
++ A Y V++ + G+ T VL+ G N K + E ++ +R
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDA-KTYTVLM--NGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 316 -RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARL 374
SY + I F ++G++++A I+ EM +V +N ++ +C+ G I+KA L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 375 YKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
M G NA+TY + G KSG +A + +
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 10/268 (3%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+LL +M + P+ TY ++ +L R F MKL+ + P+ Y L
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV--D 740
Query: 259 AVARLNTAAETY-VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR- 316
RLN + K ++ + + L+ G + V + + + F R
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 317 ----TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAA 372
+Y + I+ + G+LE A+E++ +M++A + +V + S++ Y K G +
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
++ A G + + I Y + LK GM +AL ++ + N + T
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD--QMFAKNAVDDGCKLSISTC 918
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKY 460
+++ FA+ G++E EK+ E + + +Y
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQY 946
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 174/395 (44%), Gaps = 33/395 (8%)
Query: 100 IRERPYRPRELDYSYLVEFTT--KLHG-----ISHGEKLFTRVPSEFQNELLYNNLVIAC 152
+ E +RP + Y+ L+ T K +G +S E+ T++ S F +N ++ A
Sbjct: 71 LAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIF-----FNAVINAF 125
Query: 153 LDKGVIRLSLEYMKRMRELGYPISHLVFNRLII---LHSSPSLRKNMMPKLLTQMKADKV 209
+ G + +++ + +M+ELG + +N LI + P ++ +L + D V
Sbjct: 126 SESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD-V 184
Query: 210 TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAET 269
P++ T+N+L++ + +E M+ V P+ ++Y +A + AE+
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 270 YV--EAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLA---- 323
V + V K N T +++ Y G ++ R +R + +R ++ ++
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF---VRRMKEMRVEANLVVFNSL 301
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
I F + + +E+ M+ V ++++M + G ++KAA+++K M G
Sbjct: 302 INGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV 361
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKG 443
K +A Y LA G +++ ++A + LE + S P + +++ + G
Sbjct: 362 KPDAHAYSILAKGYVRAKEPKKAEELLET--------LIVESRPNVVIFTTVISGWCSNG 413
Query: 444 DVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK 478
+++ ++F ++ K + TL+ Y + K
Sbjct: 414 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVK 448
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 132/338 (39%), Gaps = 9/338 (2%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKL 200
NE+ YN L+ ++G + ++ + + M G +H+ FN LI H S K + K+
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL-KM 395
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
M+A +TP +Y +L+ + F+ MK V I+Y +
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 261 ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-S 319
A + + K + T L+ + +G K + + I +
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y I R+G L+ A I+ M + FN ++T CK G + +A + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIF 439
++G N +++ L G SG +A + ++ P T S+++
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV-------GHHPTFFTYGSLLKGL 628
Query: 440 AEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+ G + EK + LH T +YNTL+ A K+
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 145/395 (36%), Gaps = 49/395 (12%)
Query: 107 PRELDYSYLVEFTTKLHGISHGEKLFTRV--PSEFQNELLYNNLVIACLDKGVIRLSLEY 164
P + YS L+ K+ +++ R+ N ++Y+ L+ C G ++ ++
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 165 MKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEA 224
+ M G+ H FN L+ + KA KV EA
Sbjct: 536 YEAMILEGHTRDHFTFNVLVT----------------SLCKAGKVA------------EA 567
Query: 225 NEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWS 284
E F M + PN +S+ L + + A + + + K +
Sbjct: 568 EE--------FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 619
Query: 285 TLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIGHLERAEEIWLEM 343
T LL G+ +E E+ ++ +P V T Y + A + G+L +A ++ EM
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 344 ESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG-CKANAITYRQLALGCLKSGM 402
L + S+++ C+ G A K +A G N + Y G K+G
Sbjct: 680 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 403 EEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCR 462
+ + E L TP + TT ++++ ++ G +E L E+
Sbjct: 740 WKAGIYFREQMDNL-------GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 792
Query: 463 YTFVYNTLIKAYAKAKIYDPKLL--RRMILGGARP 495
YN L+ Y+K K L R +IL G P
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 827
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 132/329 (40%), Gaps = 46/329 (13%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
+N L+ +G S M++M + GY + + +N ++ + R +LL M
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG-RFKAAIELLDHM 294
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARL 263
K+ V V TYN+L+ + + M+ R + PNE++Y L + ++
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 264 NTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLA 323
A++ E + ++ N+ T + L+ + GN KE +++ YM+
Sbjct: 355 LIASQLLNEMLSFGLSPNH-VTFNALIDGHISEGNFKEALKMF-------------YMM- 399
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVE-QFNSMMTVYCKHGVIDKAARLYKNMKANG 382
AKGL E + ++ CK+ D A Y MK NG
Sbjct: 400 ---------------------EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 383 CKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEK 442
ITY + G K+G ++A+ L + I+ P + T +++ F +
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID-------PDIVTYSALINGFCKV 491
Query: 443 GDVENVEKLFEELHKSKYCRYTFVYNTLI 471
G + +++ +++ +Y+TLI
Sbjct: 492 GRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 50/277 (18%)
Query: 138 EFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRKN 195
+ + E Y+ L+ + + ++ ++M + G P S + FN L+ LHS KN
Sbjct: 98 KIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHS-----KN 152
Query: 196 M--MPKLLTQM--KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
+P+L ++ + +K+ P +Y IL+K + E + M+ + +E I++
Sbjct: 153 FDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAF 212
Query: 252 C-ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR 310
IL+ + L A + E V+K +N + +V R+ S +
Sbjct: 213 TTILSSLYKKGELEVADNLWNEMVKKGCELDN-AAYNV---------------RIMSAQK 256
Query: 311 ELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVID 369
E P ER +E+ EM S+ GLK +N +MT YC+ G++D
Sbjct: 257 ESP--------------------ERVKELIEEM-SSMGLKPDTISYNYLMTAYCERGMLD 295
Query: 370 KAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA 406
+A ++Y+ ++ N C NA T+R L S + EQ
Sbjct: 296 EAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQG 332
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 121/309 (39%), Gaps = 37/309 (11%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAE 268
P ++ L + + LE ++ FS MK +V P S H A+L +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS--CNGLLHRFAKLGKTDD 245
Query: 269 TYVEAVEKSMTGNNW-STLDVLLILYGYLGNRKELERVWSNIRELPF----VRTKSYMLA 323
V+ K M G T+ I+ + ++E E+ F T +Y
Sbjct: 246 --VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
I+ FG++G L+ + EM+ V +N+++ +CK G + Y+ MK NG
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPI------------------------- 418
K N ++Y L K GM +QA+K +R+ +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 419 --NKRVRNSTPW-LETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA 475
N+ ++ W + T ++++ + ++ E+LF ++ + YN LI +
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 476 KAKIYDPKL 484
KAK D L
Sbjct: 484 KAKNMDRAL 492
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 153/365 (41%), Gaps = 22/365 (6%)
Query: 69 FP-VRS-NDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGIS 126
FP RS N + H +L K KR + M RP Y+ +++ K +
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDM----IGAGARPTVFTYNIMIDCMCKEGDVE 279
Query: 127 HGEKLF--TRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI 184
LF + + + YN+++ G + ++ + + M+++ + +N LI
Sbjct: 280 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 185 ILHSSPSLRKNMMP---KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKL 241
+ + +P + +MK + + P+V +Y+ L+ E ++ ++F+ M+
Sbjct: 340 ----NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 242 RQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNR-- 299
+ PNE +Y L A+ ++ ++ + E G W+ + ++ G
Sbjct: 396 VGLVPNEYTYTSLIDANC--KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 300 KELERVWSNIRELPFV-RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNS 357
KE E ++ + + SY I F + +++RA E+ E++ +G+K + + +
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK-GRGIKPDLLLYGT 512
Query: 358 MMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLP 417
+ C I+ A + MK G KAN++ Y L KSG + L L+ K L
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 418 INKRV 422
I V
Sbjct: 573 IEVTV 577
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 129/321 (40%), Gaps = 9/321 (2%)
Query: 106 RPRELDYSYLVEFTTKLHGISHGEKLFT--RVPSEFQNELLYNNLVIACLDKGVIRLSLE 163
+P + YS LV+ K + K + R NE Y +L+ A G + +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 164 YMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIE 223
M ++G + + + LI R +L +M V P++++YN L+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAE-RMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 224 ANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNW 283
N++ + + +K R ++P+ + Y + AA+ + +++ N
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 284 STLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIGHLERAEEIWLE 342
L+ Y GN E + ++EL V ++ + I+ + + +A + +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 343 MESAKGLKS-VEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSG 401
+ + GL++ F +M+ CK ++ A L++ M G + Y L G K G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 402 MEEQAL----KTLELGKRLPI 418
+AL K E+G +L +
Sbjct: 663 NVLEALALRDKMAEIGMKLDL 683
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 12/272 (4%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGY-PISHLVFNRLIILHSSPSLRK-NMMPKLLT 202
+N L+ +C + G+ + ++ + + Y P H +N IL+S +++ ++ +
Sbjct: 187 FNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKH-SYN--AILNSLLGVKQYKLIEWVYK 243
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR 262
QM D +P V TYNIL+ ++ R F M P+ +Y IL +
Sbjct: 244 QMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGN 303
Query: 263 LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK---- 318
AA T + +++ G + S L ++ G L LE + E+ +
Sbjct: 304 KPLAALTTLNHMKE--VGIDPSVLHYTTLIDG-LSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
Y + I + G L++A+E++ EM L +V +NSM+ C G +A L K M
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTL 410
++ GC N + Y L K+G +A K +
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 152/367 (41%), Gaps = 39/367 (10%)
Query: 164 YMKRMRELGYPISHLVFNRLIILHS-SPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKI 222
Y + EL Y ISH +++ I++H R + +L +M P + T+ L+
Sbjct: 92 YFSQKMEL-YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 223 EANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSMTGN 281
+ + + LM EPN + Y L LN A E E +EK G
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE-MEKKGLGA 209
Query: 282 NWSTLDVLLILYGYLGNRKELERVWSNI--REL-PFVRTKSYMLAIEAFGRIGHLERAEE 338
+ T + LL Y G + R+ ++ R + P V T + I+ F + G+L+ A+E
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT--FTALIDVFVKQGNLDEAQE 267
Query: 339 IWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCL 398
++ EM + + +NS++ C HG + A + + M + GC N +TY L G
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327
Query: 399 KSGMEEQALKTL-----------------------ELGK-RLPINKRV----RNSTPWLE 430
K M ++ +K ++GK R+ ++ R TP +
Sbjct: 328 KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387
Query: 431 TTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRM 488
T ++ G++E+ F+++ +S+ YN +I KA + +L R+
Sbjct: 388 THCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Query: 489 ILGGARP 495
+ G +P
Sbjct: 448 PVEGVKP 454
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 125/299 (41%), Gaps = 13/299 (4%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L +M + +T +V YN LM++ A ++ ++ FS M PNE +Y +L
Sbjct: 292 LFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLV 351
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK- 318
+ VE ++ MT +S L L LG+ E R++ ++ P +
Sbjct: 352 AEGQLVRLDGVVEISKRYMTQGIYSYLVRTL---SKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
SYM +E+ G A E+ ++ + +N++ + K I L++ M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
K +G + TY L + G ++A+ E +R + P + + S++
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER-------SDCKPDIISYNSLINC 521
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+ GDV+ F+E+ + Y+TL++ + K + + L M++ G +P
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 160/374 (42%), Gaps = 50/374 (13%)
Query: 160 LSLEYMKRMRELGYPISH---LVFNRLIILHSSPSL--RKNMMPKLLTQMKADKVTPHVS 214
L++E+ K + L P S ++NR+I++ S +L R + + +L M V ++S
Sbjct: 114 LAVEFFKLVPSLC-PYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNIS 172
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR-LNTAAETYVEA 273
T NIL+ N +L+ +R L+K ++ N +Y L A+ +R + A + Y E
Sbjct: 173 TVNILIGFFGNTEDLQMCLR---LVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCE- 228
Query: 274 VEKSMTGNNWSTLDVLL--ILYGYLGNRKELERVWSNIRELPFVRTK-SYMLAIEAFGRI 330
LD+ +L L ++ +V+ ++++ R + +Y + I GRI
Sbjct: 229 -----IRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRI 283
Query: 331 GHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITY 390
G + A ++ EM + +V +N++M V K ++DKA +++ M GC+ N TY
Sbjct: 284 GKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 391 RQLALGCLKSGMEEQALKTLELGKRLPINK----RVRNSTP--------------WL--- 429
L + G + +E+ KR VR + W
Sbjct: 344 SLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 430 ----ETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK----IYD 481
++ +S++E G ++ ++H+ T +YNT+ A K K I+D
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 482 PKLLRRMILGGARP 495
L +M G P
Sbjct: 464 --LFEKMKKDGPSP 475
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 140/328 (42%), Gaps = 20/328 (6%)
Query: 75 DVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
D+F L L +++A +V E +++R R E Y+ ++ ++ LF
Sbjct: 237 DIFAYNMLLDALAKDEKACQVFED-MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNE 295
Query: 135 VPSE--FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSL 192
+ +E N + YN L+ ++ +++ RM E G + ++ L+ L +
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA--- 352
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
+ + +L ++ K Y+ L++ + ++ R F M V+ SY
Sbjct: 353 -EGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY- 410
Query: 253 ILAYAHAVARLNTAAETYVEAVEK-SMTGNNWSTLDVLL--ILYGYLGNRKELERVWSNI 309
+ L A +T +EA+E S D ++ ++ LG K++ +
Sbjct: 411 ----MSMLESLCGAGKT-IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 310 REL----PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKH 365
++ P +Y + I +FGR+G ++ A I+ E+E + + +NS++ K+
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKN 525
Query: 366 GVIDKAARLYKNMKANGCKANAITYRQL 393
G +D+A +K M+ G + +TY L
Sbjct: 526 GDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 149/373 (39%), Gaps = 54/373 (14%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK-NMMPKLLTQ 203
+N L+ G + + M + G PI + FN +I H+ + + LL +
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMI--HTCGTHGHLSEAESLLKK 365
Query: 204 MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARL 263
M+ ++P TYNIL+ + A+ ++E + ++ ++ + P+ +++ A H + +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH--RAVLHILCQR 423
Query: 264 NTAAETYVEAVEKSMTGNNW--------------------------------------ST 285
AE VEAV M N+ +T
Sbjct: 424 KMVAE--VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 286 LDVLLILYGYLGNRKELERVWSNIRELPFVRTK--SYMLAIEAFGRIGHLERAEEIWLEM 343
L ++ +Y G E E V+ R + R Y + I+A+G+ E+A ++ M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 344 ESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGME 403
++ +NS+ + ++D+A R+ M +GCK TY + ++ G+
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 404 EQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRY 463
A+ E ++ + P S++ FAE G VE + F + +
Sbjct: 602 SDAVDLYEAMEKTGVK-------PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 464 TFVYNTLIKAYAK 476
V +LIKAY+K
Sbjct: 655 HIVLTSLIKAYSK 667
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 8/258 (3%)
Query: 140 QNELLYNNLVIACLDKGVI-RLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP 198
+N++L N++I K + +L K M+ G +N L + + L
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ- 570
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
++L +M P TY ++ L + + + M+ V+PNE+ Y L
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFV 315
A + + A Y +E+ +N L L+ Y +G +E RV+ +++ P V
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
+ ML++ A +G + AE I+ + KG V F +MM +Y G++D+A +
Sbjct: 691 AASNSMLSLCA--DLGIVSEAESIFNALRE-KGTCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 376 KNMKANGCKANAITYRQL 393
+ M+ +G ++ ++ Q+
Sbjct: 748 EEMRESGLLSDCTSFNQV 765
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 157/393 (39%), Gaps = 69/393 (17%)
Query: 119 TTKLHG-ISHGEKLFTRVPSE--FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELG-YP 174
T HG +S E L ++ + + YN L+ D G I +LEY +++R++G +P
Sbjct: 349 TCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFP 408
Query: 175 -------ISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEH 227
+ H++ R ++ + ++ +M + + + ++M++ NE
Sbjct: 409 DTVTHRAVLHILCQRKMVAE---------VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEG 459
Query: 228 NLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAET--YVEA-----VEKSMTG 280
+ F +L C+L+ A ++ AE +VEA +++M+G
Sbjct: 460 LVVQAKALFERFQLD---------CVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 281 NNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRT----KSYMLAIEAFGRIGHLERA 336
L+ +++ Y G K E+ S + + T +Y + + ++ A
Sbjct: 511 QRNDVLEYNVMIKAY-GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 337 EEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALG 396
+ I EM + + + +M+ Y + G++ A LY+ M+ G K N + Y L G
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 397 CLKSGMEEQALK----------------------------TLELGKRLPINKRVRNSTPW 428
+SGM E+A++ LE +R+ + P
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 429 LETTLSIVEIFAEKGDVENVEKLFEELHKSKYC 461
+ + S++ + A+ G V E +F L + C
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTC 722
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 124/280 (44%), Gaps = 12/280 (4%)
Query: 178 LVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFS 237
L +N +I + L + + L MK P TYN L ++ A ++ R +
Sbjct: 516 LEYNVMIKAYGKAKLHEKAL-SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 238 LMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLG 297
M +P +Y + ++ L + A EA+EK+ N L+ + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 298 NRKELERVWSNIRELPFVRTKSYMLA--IEAFGRIGHLERAEEIWLEMESAKGLKSVEQF 355
+E + + + E V++ +L I+A+ ++G LE A ++ +M+ ++G V
Sbjct: 635 MVEEAIQYFRMMEEHG-VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 356 NSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKR 415
NSM+++ G++ +A ++ ++ G + I++ + GM ++A +E+ +
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEA---IEVAEE 749
Query: 416 LPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEEL 455
+ + + + T + + ++ +A G + +LF E+
Sbjct: 750 MRESGLLSDCTSFNQ----VMACYAADGQLSECCELFHEM 785
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
LL +M+++ +P YN+L+ + +L + + M L+ PNE++Y L +
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 260 V-ARLNTAAETYVEAVEKSMTGNN--WSTLDVLLILYGYLGNRKELE--RVWSNIRELPF 314
+ +L+ A V N+ + TL + G + R+ + R+ S++ E +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTL-----INGLVKQRRATDAVRLLSSMEERGY 358
Query: 315 -VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAA 372
+ Y + I + G E A +W +M + KG K ++ ++ ++ C+ G ++A
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKM-AEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKT 409
+ M A+GC NA TY L G K+G+ E+A++
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 182/471 (38%), Gaps = 50/471 (10%)
Query: 60 ALRSWMRDGFPVRSNDVFH-------------AINRLRKLKMNK----RALEVMEWVIRE 102
R++ + P ++ D+FH + N + + +N+ R LE ++V+
Sbjct: 118 VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177
Query: 103 R---PYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKGV 157
P L ++ +++ KL + ++F +P + Y L+ +
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER 237
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLII-LHSSPSLRKNMMPKLLTQMKADKVTPHVSTY 216
I ++ + M+ G S +++N LI L L + + KL+ M P+ TY
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTR--VTKLVDNMFLKGCVPNEVTY 295
Query: 217 NILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEK 276
N L+ + L+ + M + PN+++Y L R T A + ++E+
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGRIGHL 333
N VL+ G +E +W + E P + Y + ++ R G
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV--YSVLVDGLCREGKP 413
Query: 334 ERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQL 393
A+EI M ++ L + ++S+M + K G+ ++A +++K M GC N Y L
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 394 ALGCLKSGMEEQAL----KTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVE 449
G G ++A+ K L +G + P SI++ G ++
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIK-----------PDTVAYSSIIKGLCGIGSMDAAL 522
Query: 450 KLFEEL---HKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMILGGARP 495
KL+ E+ + K YN L+ K LL M+ G P
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 22/230 (9%)
Query: 195 NMMPKLLTQMKAD-KVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVE-PNEISYC 252
N+ KLL K + + P+ +NIL+K ++ MK + PN I+Y
Sbjct: 177 NLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYS 236
Query: 253 ILA---YAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI 309
L +AH+ R A E + + + K + T +V++ + G E+ER
Sbjct: 237 TLMDCLFAHS--RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAG---EVERAK--- 288
Query: 310 RELPFVRTK-------SYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTV 361
+ L F++ +Y + F ++G ++ A++ + E++ GLK + ++M
Sbjct: 289 KILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKT-GLKLDTVGYTTLMNC 347
Query: 362 YCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
+C++G D+A +L MKA+ C+A+ +TY + G G E+AL+ L+
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 334 ERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
+ A E++ +M S +G+ FN M+ +C+ G +++A ++ MK NGC N Y
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 393 LALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT--LSIVEIFAEKGDVENVEK 450
L G K G ++A +T + V+ + L+T +++ F G+ + K
Sbjct: 309 LMNGFCKVGKIQEAKQTFD---------EVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 451 LFEELHKSKYCRYTFVYNTLIKAYA 475
L E+ S+ T YN +++ +
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLS 384
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 19/314 (6%)
Query: 110 LDYSYLVEFTTK---LHGISHGEKL--FTRVPSEF------QNELLYNNLVIACLDKGVI 158
L+ ++V+ T LHG+ KL R+ E + + YN L+ C K +
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 159 RLSLEYMKRMRELGYPISHLVFNRLII-LHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
+ ++ M + G + ++ LI L + + + + + K + + P V TY+
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI--QFWDDCKRNGMLPDVYTYS 614
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY--CILAYAHAVARLNTAAETYVEAVE 275
+++ E FF M + V+PN + Y I AY + RL+ A E +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-GRLSMALELREDMKH 673
Query: 276 KSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR-ELPFVRTKSYMLAIEAFGRIGHLE 334
K ++ N+ +T L+ + +E + ++ +R E Y I+ +G++G +
Sbjct: 674 KGISPNS-ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 335 RAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLA 394
+ E + EM S + + M+ Y + G + +A+RL M+ G ++ITY++
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 395 LGCLKSGMEEQALK 408
G LK G +A K
Sbjct: 793 YGYLKQGGVLEAFK 806
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---LPFVRTK 318
+L+ A E V++ + +N+ T +L+ + +E + W + + LP V T
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNY-TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
S M I+ + E +E + EM S + +N ++ YC+ G + A L ++M
Sbjct: 614 SVM--IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 379 KANGCKANAITYRQLALG-CLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
K G N+ TY L G + S +EE L E+ R+ P + ++++
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM--------RMEGLEPNVFHYTALID 723
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ + G + VE L E+H Y +I YA+
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 21/320 (6%)
Query: 165 MKRMRELGYPISHLVFNRLI-ILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIE 223
+K M + G+P + +V+N LI + SL K + K L K +T STYN L+K
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS--STYNTLIKGY 410
Query: 224 ANEHNLENLMRFFSLMKLRQVEPNEISY----CILAYAHAVARLNTAAETYVEAVEKSMT 279
+N R M N+ S+ C+L +H + ++A E + ++M+
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC-SHLM--FDSALRFVGEMLLRNMS 467
Query: 280 --GNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAE 337
G +TL L +G + K LE + + + V T++ + G L+ A
Sbjct: 468 PGGGLLTTLISGLCKHG--KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 338 EIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGC 397
I E+ + +N++++ C +D+A M G K + TY L G
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 398 LKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHK 457
E+A++ + KR P + T +++ + E ++ F+E+
Sbjct: 586 FNMNKVEEAIQFWDDCKR-------NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 458 SKYCRYTFVYNTLIKAYAKA 477
T VYN LI+AY ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRS 658
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 19/314 (6%)
Query: 110 LDYSYLVEFTTK---LHGISHGEKL--FTRVPSEF------QNELLYNNLVIACLDKGVI 158
L+ ++V+ T LHG+ KL R+ E + + YN L+ C K +
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 159 RLSLEYMKRMRELGYPISHLVFNRLII-LHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
+ ++ M + G + ++ LI L + + + + + K + + P V TY+
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI--QFWDDCKRNGMLPDVYTYS 614
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY--CILAYAHAVARLNTAAETYVEAVE 275
+++ E FF M + V+PN + Y I AY + RL+ A E +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS-GRLSMALELREDMKH 673
Query: 276 KSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR-ELPFVRTKSYMLAIEAFGRIGHLE 334
K ++ N+ +T L+ + +E + ++ +R E Y I+ +G++G +
Sbjct: 674 KGISPNS-ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 335 RAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLA 394
+ E + EM S + + M+ Y + G + +A+RL M+ G ++ITY++
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 395 LGCLKSGMEEQALK 408
G LK G +A K
Sbjct: 793 YGYLKQGGVLEAFK 806
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---LPFVRTK 318
+L+ A E V++ + +N+ T +L+ + +E + W + + LP V T
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNY-TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
S M I+ + E +E + EM S + +N ++ YC+ G + A L ++M
Sbjct: 614 SVM--IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 379 KANGCKANAITYRQLALG-CLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
K G N+ TY L G + S +EE L E+ R+ P + ++++
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM--------RMEGLEPNVFHYTALID 723
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ + G + VE L E+H Y +I YA+
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 21/320 (6%)
Query: 165 MKRMRELGYPISHLVFNRLI-ILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIE 223
+K M + G+P + +V+N LI + SL K + K L K +T STYN L+K
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS--STYNTLIKGY 410
Query: 224 ANEHNLENLMRFFSLMKLRQVEPNEISY----CILAYAHAVARLNTAAETYVEAVEKSMT 279
+N R M N+ S+ C+L +H + ++A E + ++M+
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC-SHLM--FDSALRFVGEMLLRNMS 467
Query: 280 --GNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAE 337
G +TL L +G + K LE + + + V T++ + G L+ A
Sbjct: 468 PGGGLLTTLISGLCKHG--KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 338 EIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGC 397
I E+ + +N++++ C +D+A M G K + TY L G
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 398 LKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHK 457
E+A++ + KR P + T +++ + E ++ F+E+
Sbjct: 586 FNMNKVEEAIQFWDDCKR-------NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 458 SKYCRYTFVYNTLIKAYAKA 477
T VYN LI+AY ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRS 658
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 173/415 (41%), Gaps = 19/415 (4%)
Query: 90 KRALEVMEWVIRERPY---RPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELL 144
++ L+ V E P R E+ Y++L+ I LF ++ + F
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGY-PISHLVFNRLIILHSSPSLRKNMMPKLLTQ 203
Y L+ + +L +K M E G P H + L S K +LL Q
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK--ARELLGQ 383
Query: 204 MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARL 263
M + P+V TYN L+ +E+ + LM+ R++ PN +Y L + + +
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 264 NTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYML 322
+ A + +E+ + + T + L+ GN R+ S + + V + +Y
Sbjct: 444 HKAMGVLNKMLERKVLPD-VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG 382
I++ + +E A +++ +E +V + +++ YCK G +D+A + + M +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 383 CKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEK 442
C N++T+ L G G ++A TL K + I + P + T ++ +
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEA--TLLEEKMVKIGLQ-----PTVSTDTILIHRLLKD 615
Query: 443 GDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDPK-LLRRMILGGARP 495
GD ++ F+++ S Y T I+ Y + ++ D + ++ +M G P
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 127/328 (38%), Gaps = 52/328 (15%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR-LNTAA 267
+ P TY L+ +L++ + F+ M L+ NE++Y L + VAR ++ A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK----SYMLA 323
+ +V+ + + T+ +L L + + ++E+ K +Y +
Sbjct: 309 DLFVKMKDDEC----FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA------------ 371
I++ E+A E+ +M + +V +N+++ YCK G+I+ A
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 372 ---ARLYKNMKANGCKAN-------------------AITYRQLALGCLKSGMEEQALKT 409
R Y + CK+N +TY L G +SG + A +
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 410 LELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNT 469
L L +N R W T S+++ + VE LF+ L + +Y
Sbjct: 485 LSL-----MNDRGLVPDQW--TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 470 LIKAYAKAKIYDPK--LLRRMILGGARP 495
LI Y KA D +L +M+ P
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 151/366 (41%), Gaps = 45/366 (12%)
Query: 49 EKLPKGEPVGSALRSWMRDGFPVRSNDVFHAI--NRLRKLKMNKRALEVMEWVIRERPYR 106
+L P +A S F +R+ + I N L L+ N AL++ ++ RP
Sbjct: 23 HRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFND-ALDLFTRMVHSRPL- 80
Query: 107 PRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYN-NLVI--ACLDKGVIRLSLE 163
P +D++ L+ K++ LF ++ LL N+V+ CL R S
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC- 139
Query: 164 YMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIE 223
++ +M +LG+ + F L+ + + ++ + L Q+ P+V TY L++
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI-ALFDQILGMGFKPNVVTYTTLIRCL 198
Query: 224 ANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAETYVEAVEKSMTGNN 282
+L + + F+ M PN ++Y L + R AA
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA--------------- 243
Query: 283 WSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLE 342
W D++ ++ +E P V T + I+AF ++G L A+E++
Sbjct: 244 WLLRDMM---------KRRIE---------PNVIT--FTALIDAFVKVGKLMEAKELYNV 283
Query: 343 MESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGM 402
M V + S++ C +G++D+A +++ M+ NGC N + Y L G KS
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 403 EEQALK 408
E +K
Sbjct: 344 VEDGMK 349
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 141/360 (39%), Gaps = 48/360 (13%)
Query: 105 YRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQ--NELLYNNLVIACLDKGVIRLSL 162
++P + Y+ L+ K ++H +LF ++ + N + YN LV + G +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 163 EYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK-LLTQMKADKVTPHVSTYNILMK 221
++ M + + + F LI + + K M K L M V P V TY L+
Sbjct: 244 WLLRDMMKRRIEPNVITFTALI--DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 222 IEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA-RLNTAAETYVEAVEKSMTG 280
L+ + F LM+ PNE+ Y L + + R+ + + E +K +
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 281 NNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIW 340
N T +Y + I+ + +G + A+E++
Sbjct: 362 N-----------------------------------TITYTVLIQGYCLVGRPDVAQEVF 386
Query: 341 LEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKS 400
+M S + + +N ++ C +G ++KA +++ M+ N +TY + G K
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 401 GMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKY 460
G E A L + + P + T +++ F +G + + LF+++ + +
Sbjct: 447 GKVEDAFD-------LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 151/364 (41%), Gaps = 39/364 (10%)
Query: 136 PSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKN 195
PS+ N ++ C+ G I +L MR + + +N L+I S R
Sbjct: 55 PSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMR----AKNTITWNSLLIGISKDPSRMM 110
Query: 196 MMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILA 255
+L ++ P +YNI++ N E FF M + + + I
Sbjct: 111 EAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK--DAASWNTMITG 164
Query: 256 YAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV 315
YA + A E + +EK+ +W+ + + GY+ +LE+ + P
Sbjct: 165 YARR-GEMEKARELFYSMMEKNEV--SWNAM-----ISGYI-ECGDLEKASHFFKVAPVR 215
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
++ I + + +E AE ++ +M K L + +N+M++ Y ++ + +L+
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT---WNAMISGYVENSRPEDGLKLF 272
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT--L 433
+ M G + N+ LGC L L+LG++ I++ V ST + T
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGC-------SELSALQLGRQ--IHQIVSKSTLCNDVTALT 323
Query: 434 SIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPK--LLRRMILG 491
S++ ++ + G++ + KLFE + K + +N +I YA+ D L R MI
Sbjct: 324 SLISMYCKCGELGDAWKLFEVMKK----KDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 492 GARP 495
RP
Sbjct: 380 KIRP 383
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 126/268 (47%), Gaps = 18/268 (6%)
Query: 233 MRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGN---NWSTLDVL 289
+RFF + + E S+ ++ AR A ++ ++E+ G + L
Sbjct: 85 LRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSL 144
Query: 290 LILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIE-AFGRIGHLERAEEIWLEMES 345
+ YG G +E +++ ++++ P V T + +L+I GR G A +++ EM
Sbjct: 145 IRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTG---MAHDLFDEMRR 201
Query: 346 AKGLKSVE-QFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEE 404
G+ FN+++ +CK+ ++D+A R++K+M+ C + +TY + G ++G +
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 405 QALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYT 464
A L + K+ + P + + ++V + K +++ +F ++
Sbjct: 262 IAHNVLS-----GMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 465 FVYNTLIKAYAKAKIYDPKLLRRMILGG 492
YNTLIK ++A YD ++ +++GG
Sbjct: 317 VTYNTLIKGLSEAHRYDE--IKDILIGG 342
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 151/408 (37%), Gaps = 68/408 (16%)
Query: 100 IRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKGV 157
+ E P ++ +S +VE+ K + + + R+ S + +L + ++ CL
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 158 IRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
+LE E I+H I L + + L M+ + P+V YN
Sbjct: 431 PEAALEIFNDSFESW--IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKS 277
+M N++ FS M + +EPN +Y IL
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSIL----------------------- 525
Query: 278 MTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS----YMLAIEAFGRIGHL 333
+ G+ N+ E + W I ++ ++ Y I ++G
Sbjct: 526 --------------IDGFFKNKDE-QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQT 570
Query: 334 ERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
+A+E+ + K S +NS++ + K G D A Y+ M NG N +T+
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 393 LALGCLKSGMEEQAL------KTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVE 446
L G KS + AL K++EL LP ++++ F +K D++
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG-------------ALIDGFCKKNDMK 677
Query: 447 NVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGG 492
LF EL + VYN+LI + D L ++M+ G
Sbjct: 678 TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 24/237 (10%)
Query: 178 LVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFS 237
+VFN +I +++ S + + L+ MK + P V T+N L+ ++ N E +
Sbjct: 184 VVFNAMISGYANNS-QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILE 242
Query: 238 LMKLRQVEPNEISYC--ILAYAHAVARLNTAAETYVEAVEKSMTGN---NWSTLDVLL-- 290
LM L +P+ +S+ I H N E +A ++ +T N +T+ LL
Sbjct: 243 LMCLDGYKPDVVSWTSIISGLVH-----NFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Query: 291 -ILYGYLGNRKELE--RVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAK 347
Y+ + KE+ V + + + FVR+ ++ +G+ G + +E + L ++ K
Sbjct: 298 CTTLAYMKHGKEIHGYSVVTGLEDHGFVRSA----LLDMYGKCGFI--SEAMILFRKTPK 351
Query: 348 GLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEE 404
K+ FNSM+ Y HG+ DKA L+ M+A G K + +T+ + C +G+ +
Sbjct: 352 --KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 313 PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAA 372
P V T S + I F + + A ++ +ME V +N+++ CK G+++ A
Sbjct: 137 PDVVTVSSL--INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
L+ M+ +G +A+A+TY L G SG A RL + +R+ P + T
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA-------ARLMRDMVMRDIVPNVITF 247
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMIL 490
+++++F ++G KL+EE+ + F YN+LI D ++L M+
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 491 GGARP 495
G P
Sbjct: 308 KGCLP 312
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 148/341 (43%), Gaps = 30/341 (8%)
Query: 63 SWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKL 122
S + +GF + N VF AI+ + K++ E +RP + Y+ +++ + K+
Sbjct: 143 SSLINGF-CQGNRVFDAIDLVSKME--------------EMGFRPDVVIYNTIIDGSCKI 187
Query: 123 HGISHGEKLFTRVPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVF 180
++ +LF R+ + + + YN+LV G + M+ M + + F
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 181 NRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMK 240
+I + M KL +M V P V TYN L+ ++ + LM
Sbjct: 248 TAVIDVFVKEGKFSEAM-KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 241 LRQVEPNEISYCILAYAHAVA-RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYL--G 297
+ P+ ++Y L + R++ + + E ++ + G+ T+ I+ GY G
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD---TITYNTIIQGYFQAG 363
Query: 298 NRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGH--LERAEEIWLEMESAKGLKSVEQF 355
+ ++S + P +RT S +L +G + +E+A ++ M+ ++ + +
Sbjct: 364 RPDAAQEIFSRMDSRPNIRTYSILL----YGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 356 NSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALG 396
N ++ CK G ++ A L++++ G K + ++Y + G
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 165/405 (40%), Gaps = 23/405 (5%)
Query: 99 VIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYN-NLVIACL---D 154
+I+ RP P +D+S ++ K LF + LY+ N+VI CL
Sbjct: 60 MIQSRPL-PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 155 KGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
+ VI LS+ + +M + GY + + LI + R L+++M+ P V
Sbjct: 119 RFVIALSV--VGKMMKFGYEPDVVTVSSLINGFCQGN-RVFDAIDLVSKMEEMGFRPDVV 175
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAHAVARLNTAAETYVEA 273
YN ++ + + + F M+ V + ++Y ++A R + AA +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI-RELPFVRTKSYMLAIEAFGRIGH 332
V + + N T ++ ++ G E +++ + R +Y I G
Sbjct: 236 VMRDIV-PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 333 LERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
++ A+++ M + L V +N+++ +CK +D+ +L++ M G + ITY
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 393 LALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLF 452
+ G ++G + A E+ R+ +S P + T ++ VE LF
Sbjct: 355 IIQGYFQAGRPDAA---QEIFSRM-------DSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 453 EELHKSKYCRYTFVYNTLIKAYAK-AKIYDP-KLLRRMILGGARP 495
E + KS+ YN +I K + D L R + G +P
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 155/376 (41%), Gaps = 41/376 (10%)
Query: 134 RVPSEFQNELLYNNLVIACLDK---GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSP 190
R S N + Y+ L+ CL+K G + L M M E YP S +FN L+ + +
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM--MMEGCYP-SPKIFNSLVHAYCT- 384
Query: 191 SLRKNMMPKLLTQMKADKVTPHVSTYNILM------KIEANEHNLENLMRFFSLMKLRQV 244
S + KLL +M P YNIL+ K N L+ + +S M V
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 245 EPNEISYCILAYAHAVARLNTAAETYVEA--VEKSMTGNNW----STLDVLLILYGYLGN 298
N+I+ + R +A Y +A V + M G + ST +L YL N
Sbjct: 445 VLNKIN------VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL---NYLCN 495
Query: 299 RKELERVWSNIRELP----FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQ 354
++E + E+ +Y + +++F + G +E+A + + EM +V
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 355 FNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLEL-- 412
+ +++ Y K + A L++ M + GC N +TY L G K+G E+A + E
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 413 -GKRLP-----INKRVRNST-PWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTF 465
K +P + NS P + T ++++ F + VE KL + +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 466 VYNTLIKAYAKAKIYD 481
VY+ LI K D
Sbjct: 676 VYDALIDGLCKVGKLD 691
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 149/369 (40%), Gaps = 27/369 (7%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK-NMMPKLLTQ 203
Y +V + G+I + ++ MRE+G + + + LI H+ +K + +L
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI--HAYLKAKKVSYANELFET 578
Query: 204 MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLM-----------KLRQVE-----PN 247
M ++ P++ TY+ L+ +E + F M +Q + PN
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 248 EISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWS 307
++Y L + A ++A+ N D L+ +G E + V +
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 308 NIRELPFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHG 366
+ E F T +Y I+ + ++ + A ++ +M +V + M+ CK G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 367 VIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNST 426
D+A +L + M+ GC+ N +TY + G GM + LEL +R+ +
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDG---FGMIGKIETCLELLERMG----SKGVA 811
Query: 427 PWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKLLR 486
P T +++ + G ++ L EE+ ++ + +T Y +I+ + K I LL
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLD 871
Query: 487 RMILGGARP 495
+ P
Sbjct: 872 EIGQDDTAP 880
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 131/324 (40%), Gaps = 50/324 (15%)
Query: 178 LVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFS 237
+ + +LI SL + M L +M+A P+V TY+ L+ N+ L R +
Sbjct: 303 VFYTKLISGLCEASLFEEAM-DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 238 LMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEK---------------SMTGN- 281
+M + P+ + L +A+ + ++ A ++ + K S+ G+
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 282 ---NWSTLDVL------LILYGYLGNR-------------KELERVWSNIREL---PFV- 315
N LD+ ++ G + N+ + E+ +S IRE+ F+
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
T +Y + +E A ++ EM+ + V + M+ +CK G+I++A + +
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
M+ GC N +TY L LK+ K + L P + T ++
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKA-------KKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 436 VEIFAEKGDVENVEKLFEELHKSK 459
++ + G VE ++FE + SK
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSK 618
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
KLL MK V P+ YN L+ + S MK EPN++++ IL A+
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAY 258
Query: 259 AVARLNTAAETYVE-AVEKSMTGNNWSTLDVLLILY--GYLGNRKE-LERVWSNIRELPF 314
+ + +E + + V+ +L G + E LERV S ++
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 315 VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARL 374
V + ++ + +G + A+ ++EME L +VE +N ++ YC G++D A
Sbjct: 319 VACNTL---VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDT 375
Query: 375 YKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLEL 412
+ +MK + + N T+ L G G + LK LE+
Sbjct: 376 FNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEM 413
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 128/299 (42%), Gaps = 12/299 (4%)
Query: 163 EYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN-ILMK 221
+ + + R GYP++ +F LI +++ L + ++ ++ + TP N IL
Sbjct: 105 DVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFN-FTPQPKHLNRILDV 163
Query: 222 IEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSMTG 280
+ ++ L+ F +L V PN SY +L A + L+ A + + + +E+ +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV- 222
Query: 281 NNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYMLAIEAFGRIGHLERAEEI 339
+ + +L+ + G + ++ FV + SY + + R L A ++
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 340 WLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLK 399
M+ + +N+M+ +C+ A ++ +M +NGC N+++YR L G
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 400 SGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKS 458
GM ++ K LE + +P + +V+ F G VE + E + K+
Sbjct: 343 QGMFDEGKKYLE-------EMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 394
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 26/309 (8%)
Query: 115 LVEFTTKLHGISHGEKLFTRVPSEFQ--------NELLYNNLVIACLDKGVIRLSLEYMK 166
+V F + ++G H + + + Q N ++YN ++ + +KG + +L+ +K
Sbjct: 149 IVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Query: 167 RMRELGYPISHLVFNRLI--ILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEA 224
M+++G + +N LI + HS + ++L+ M ++P V T++ L+ +
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTW---GVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 225 NEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWS 284
E L + ++ M R V PN ++Y L + L A+ + + N
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 285 TLDVLLILYGYLGNRKELERVWSNIRELPFVR-------TKSYMLAIEAFGRIGHLERAE 337
T + L+ GY + +RV ++ L + T +Y + + + G AE
Sbjct: 326 TYNTLI--NGYC----KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 338 EIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGC 397
++ M S + FN ++ C HG I KA ++++ + ITY + G
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL 439
Query: 398 LKSGMEEQA 406
K+ E A
Sbjct: 440 CKADKVEDA 448
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 181/460 (39%), Gaps = 34/460 (7%)
Query: 51 LPKGEPVGS-ALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRE 109
L KG V + +LR F RS+ + L +K N AL + + P P
Sbjct: 22 LEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFND-ALTLFCDMAESHPL-PSI 79
Query: 110 LDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYN-NLVIACLDKGV-IRLSLEYMKR 167
+D+S L+ KL+ LF + + LY+ +I C + + L+L + +
Sbjct: 80 VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 168 MRELGYPISHLVFNRLI--ILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEAN 225
M +LG+ S + F L+ H + R L+ Q+ P+V YN ++
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVN---RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 226 EHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEA-VEKSMTGNNWS 284
+ + + MK + P+ ++ Y + RL + V A + M S
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPD-----VVTYNSLITRLFHSGTWGVSARILSDMMRMGIS 251
Query: 285 ----TLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGRIGHLERAE 337
T L+ +YG G E ++ ++ + + P + T Y I G L+ A+
Sbjct: 252 PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT--YNSLINGLCIHGLLDEAK 309
Query: 338 EIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGC 397
++ + S + +N+++ YCK +D ++ M +G + TY L G
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 398 LKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHK 457
++G A K LG+ + P + T +++ + G + E+L K
Sbjct: 370 CQAGKFSAAEKV--LGRMVSCGVH-----PDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 458 SKYCRYTFVYNTLIKAYAKA-KIYDP-KLLRRMILGGARP 495
SK YN +IK KA K+ D L + L G P
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+L +MK +++ P +TYN L+ E+N+E + S M VEPN I++ L +
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 259 AVAR-LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VR 316
R + A Y E K + + T L+ + N KE R++S++ E
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVP-DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYK 376
++ ++ F + G L A + + E + + F ++ C++G I +A+R +
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 377 NMKANGCKANAITYRQLALGCLK 399
+M++ G + +Y + G L+
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQ 596
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 32/315 (10%)
Query: 89 NKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNL 148
+K L ++ ++R R + +DY + IS G VP + +Y L
Sbjct: 164 SKACLSILNGLVRRRRFDSVWVDYQLM---------ISRG-----LVP----DVHIYFVL 205
Query: 149 VIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP---KLLTQMK 205
C +G+ + + M LG + ++ I+ R N M K+ MK
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYIL----DLCRDNKMEEAEKMFELMK 261
Query: 206 ADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR-LN 264
V P++ TY+ ++ N+ + + + ++ PN + + L AR L
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELV 321
Query: 265 TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYM 321
TA +V V+ + N + + L+ + GN E + S + L P V T Y
Sbjct: 322 TARSLFVHMVKFGVDPNLY-VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT--YT 378
Query: 322 LAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKAN 381
+ I + A ++ +M++ + S +NS++ YCK +++A L M A+
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 382 GCKANAITYRQLALG 396
G + N IT+ L G
Sbjct: 439 GVEPNIITFSTLIDG 453
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 176/400 (44%), Gaps = 23/400 (5%)
Query: 85 KLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKL-HGISHGEKLFTR-VPSEFQ-N 141
+L + +AL ++ + + P L Y+ +++ T + IS E +F + S+ N
Sbjct: 146 RLSLIDKALSIVHLA-QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPN 204
Query: 142 ELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK-NMMPKL 200
YN L+ G I ++L +M G + + +N LI LRK + KL
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI--DGYCKLRKIDDGFKL 262
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
L M + P++ +YN+++ E ++ + + M R +E++Y L +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 261 -ARLNTAAETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNRKE-LERVWSNIREL-PFV 315
+ A + E + +T + +++L + G + E L+++ +R L P
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM--RVRGLCPNE 380
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
RT Y ++ F + G++ A + EM SV +N+++ +C G ++ A +
Sbjct: 381 RT--YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
++MK G + ++Y + G +S ++AL+ KR + K ++ P T S+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV----KREMVEKGIK---PDTITYSSL 491
Query: 436 VEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA 475
++ F E+ + L+EE+ + F Y LI AY
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 61/424 (14%)
Query: 107 PRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF--QNELLYNNLVIACLDKGVIRLSLEY 164
P + Y+ L++ KL I G KL + + N + YN ++ +G ++
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 165 MKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLL--TQMKADKVTPHVSTYNILMKI 222
+ M GY + + +N LI + N L+ +M +TP V TY L+
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEG---NFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 223 EANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNN 282
N+ M F M++R + PNE +Y L ++ E Y V + M N
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV--DGFSQKGYMNEAY--RVLREMNDNG 410
Query: 283 WS----TLDVLLILYGYLGNRKELERVWSNIRELPFV-RTKSYMLAIEAFGRIGHLERAE 337
+S T + L+ + G ++ V +++E SY + F R ++ A
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 338 EIWLEMESAKGLKS------------VEQ------------------------FNSMMTV 361
+ EM KG+K EQ + +++
Sbjct: 471 RVKREM-VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 362 YCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL-------ELGK 414
YC G ++KA +L+ M G + +TY L G K +A + L +
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 415 RLPINKRVRN-STPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
+ + + N S ++ +S+++ F KG + +++FE + + YN +I
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 474 YAKA 477
+ +A
Sbjct: 650 HCRA 653
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 166/395 (42%), Gaps = 36/395 (9%)
Query: 80 INRLRKLKMNKRALEVMEWVIRERP-----YRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
IN L K + ALEV E + +R + + ++ L++ K+ + E+L R
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395
Query: 135 VPSE---FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI---ILHS 188
+ E N + YN L+ G + + E + RM+E + + N ++ H
Sbjct: 396 MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 189 SPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPN- 247
NM M+ + V +V TY L+ + N+E M ++ M P+
Sbjct: 456 GL----NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 248 EISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLL--ILYGYLGNRKELERV 305
+I Y +++ V R + A + VEK G +LD+L +L G ++ E+V
Sbjct: 512 KIYYALISGLCQVRRDHDA----IRVVEKLKEGG--FSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 306 WSNIRELPFVRTK----SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTV 361
+ + ++ K +Y I FG+ E E + +M +V + +++
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 362 YCKHGVIDKAARLYKNMKANG-CKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINK 420
YC G +D+A +L+K+M + N + Y L K G QAL E K K
Sbjct: 626 YCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM----K 681
Query: 421 RVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEEL 455
VR P +ET ++ + EK E + KL +E+
Sbjct: 682 MVR---PNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 133/343 (38%), Gaps = 42/343 (12%)
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
R N +L+ + +K +N L+ ++ + M ++ P+ ++
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 253 ILAYAHAVAR-LNTAAETYVEAVEKSMTGNN--------WSTLDVLLILYGYLGNRKELE 303
IL +R ++ A E + + K N ++TL L G L +EL
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL- 392
Query: 304 RVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYC 363
V + E +Y I+ + R G LE A+E+ M+ + +V N+++ C
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 364 KHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQAL----KTLELGKRLPIN 419
+H ++ A + +M+ G K N +TY L C E+A+ K LE G P
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS-PDA 511
Query: 420 K----------RVRNSTPWLETTLSIVE---------------IFAEKGDVENVEKLFEE 454
K +VR + + E +F +K + E V ++ +
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 455 LHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+ K + YNTLI + K K ++ +++ +M G P
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 21/282 (7%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYA 257
KL M ++++N ++ + +E F ++ R + ++Y IL
Sbjct: 147 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGW 205
Query: 258 HAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF--- 314
+ R A E E VE+ + N +T + +L + G ++ W E+
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPN-LTTYNTMLKGFFRAG---QIRHAWEFFLEMKKRDC 261
Query: 315 -VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
+ +Y + FG G ++RA ++ EM L SV +N+M+ V CK ++ A
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNST--PWLET 431
+++ M G + N TY L G +G E + + +R+ N P +T
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAG---------EFSRGEELMQRMENEGCEPNFQT 372
Query: 432 TLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
++ ++E +VE LFE++ YN LI
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 213 VSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA-RLNTAAETYV 271
S++++ + I A H + M+ ++ P+ ++ I+A +A A + + A + ++
Sbjct: 91 ASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 150
Query: 272 EAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP---FVRTKSYMLAIEAFG 328
E + L + L K +E+ + R L V T +Y + + +
Sbjct: 151 NMHEHGC----FQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWC 206
Query: 329 RIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAI 388
I +A E+ EM ++ +N+M+ + + G I A + MK C+ + +
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 389 TYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNST-PWLETTLSIVEIFAEKGDVEN 447
TY + G +G ++A R ++ +R P + T +++++ +K +VEN
Sbjct: 267 TYTTVVHGFGVAGEIKRA--------RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 448 VEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMILGGARP 495
+FEE+ + Y YN LI+ A + +L++RM G P
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 166/395 (42%), Gaps = 36/395 (9%)
Query: 80 INRLRKLKMNKRALEVMEWVIRERP-----YRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
IN L K + ALEV E + +R + + ++ L++ K+ + E+L R
Sbjct: 336 INTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395
Query: 135 VPSE---FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI---ILHS 188
+ E N + YN L+ G + + E + RM+E + + N ++ H
Sbjct: 396 MKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 189 SPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPN- 247
NM M+ + V +V TY L+ + N+E M ++ M P+
Sbjct: 456 G----LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 248 EISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLL--ILYGYLGNRKELERV 305
+I Y +++ V R + A + VEK G +LD+L +L G ++ E+V
Sbjct: 512 KIYYALISGLCQVRRDHDA----IRVVEKLKEGG--FSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 306 WSNIRELPFVRTK----SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTV 361
+ + ++ K +Y I FG+ E E + +M +V + +++
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 362 YCKHGVIDKAARLYKNMKANG-CKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINK 420
YC G +D+A +L+K+M + N + Y L K G QAL E K K
Sbjct: 626 YCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM----K 681
Query: 421 RVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEEL 455
VR P +ET ++ + EK E + KL +E+
Sbjct: 682 MVR---PNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 133/343 (38%), Gaps = 42/343 (12%)
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
R N +L+ + +K +N L+ ++ + M ++ P+ ++
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 253 ILAYAHAVAR-LNTAAETYVEAVEKSMTGNN--------WSTLDVLLILYGYLGNRKELE 303
IL +R ++ A E + + K N ++TL L G L +EL
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL- 392
Query: 304 RVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYC 363
V + E +Y I+ + R G LE A+E+ M+ + +V N+++ C
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 364 KHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQAL----KTLELGKRLPIN 419
+H ++ A + +M+ G K N +TY L C E+A+ K LE G P
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS-PDA 511
Query: 420 K----------RVRNSTPWLETTLSIVE---------------IFAEKGDVENVEKLFEE 454
K +VR + + E +F +K + E V ++ +
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 455 LHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+ K + YNTLI + K K ++ +++ +M G P
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 142/348 (40%), Gaps = 43/348 (12%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF--QNELLYNNLVIACLDKGVIR 159
E ++P + Y+ LV T+ L ++V + +L+N ++ A + G +
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 406
Query: 160 LSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNIL 219
+++ ++M+E G + FN LI + + L ++ + + P+ T NIL
Sbjct: 407 QAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNIL 466
Query: 220 MKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAETYVEAVEKSM 278
++ N+ +E M+ V+P+ +++ LA A+A + TA + + + +
Sbjct: 467 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 279 TGNNWSTLDVLLILYGYLGNRKELERVWSNIREL-------------------------- 312
N T ++ Y G +E R + ++EL
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 313 ------------PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMT 360
P V T S ++ A+ +G ++R EEI+ +M + F+ +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLM--NAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Query: 361 VYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
Y + G +KA ++ M+ G + N + Y Q+ G +G ++A++
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 145/344 (42%), Gaps = 15/344 (4%)
Query: 91 RALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNN--- 147
+A+++ E ++E +P ++ L++ K+ + +L + ++E+L N
Sbjct: 407 QAMKIFE-KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM---LRDEMLQPNDRT 462
Query: 148 ---LVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
LV A ++ I + + +M+ G + FN L ++ ++ +M
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRM 522
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLN 264
+KV P+V T ++ E +E +RFF MK V PN + L
Sbjct: 523 LHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM 582
Query: 265 TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLA 323
V+ +E+ + T L+ + +G+ K E +++++ E ++ +
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKA-NG 382
+ + R G E+AE+I +M +V + +++ +C G + KA ++YK M G
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 383 CKANAITYRQLALGCLKSGM---EEQALKTLELGKRLPINKRVR 423
N TY L G ++ E+ LK +E +P K ++
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQ 746
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 14/267 (5%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L ++MK + P+V+TY L+ + +LM PN +Y A +
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTY--NAAIDS 437
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS 319
+ + + A E Y E + K+ + + IL + ++ + + + ++
Sbjct: 438 LCKKSRAPEAY-ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 320 YM----LAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
M + I AF R ++ +E ++ + S + + E + SM++ YCK G ID A + +
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
NMK +GC ++ TY L G K M ++A K E R +P T +++
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID-------RGLSPPEVTRVTL 609
Query: 436 VEIFAEKGDVENVEKLFEELHKSKYCR 462
+ ++ D N L E L K + R
Sbjct: 610 AYEYCKRNDSANAMILLEPLDKKLWIR 636
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 150/382 (39%), Gaps = 55/382 (14%)
Query: 80 INRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE- 138
I+ L K ++A + ++R Y+P Y+ ++ K ++ E LF+R+ +
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 139 -FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMM 197
F N Y L+ G + E M M + G+ + +N I +K+
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI----DSLCKKSRA 444
Query: 198 PK---LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCIL 254
P+ LL + + + TY IL++ + ++++ + FF M E
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE--------- 495
Query: 255 AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF 314
A RLN ++L+ + KE ER++ + L
Sbjct: 496 ----ADMRLN----------------------NILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 315 VRTK-SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
+ TK +Y I + + G ++ A + + M+ + + S+++ CK ++D+A +
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL 433
LY+ M G +T LA K A+ LE P++K++ W+ T
Sbjct: 590 LYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE-----PLDKKL-----WIRTVR 639
Query: 434 SIVEIFAEKGDVENVEKLFEEL 455
++V + V F++L
Sbjct: 640 TLVRKLCSEKKVGVAALFFQKL 661
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 147/356 (41%), Gaps = 20/356 (5%)
Query: 148 LVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLII-LHSSPSLRKNMMPKLLTQMKA 206
++ A + G++ ++ Y ++M +LG+ + + F LI L S+++ ++L +M
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF--EMLEEMVR 315
Query: 207 DKVTPHVSTYNILMKIEANEHNLENLMRFF-SLMKLRQVEPNEISYCILAYAHAV-ARLN 264
+ P+V T+ L+ E R F L++ +PN +Y + + +LN
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375
Query: 265 TAAETYVEAVEKSM--TGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYML 322
A + E+ + N ++TL G G EL + + +P + T Y
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT--YNA 433
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG 382
AI++ + A E+ + S + ++ CK I++A + M G
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Query: 383 CKANA-ITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAE 441
+A+ + +A C + M+E + +L L + P ET S++ + +
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESE-RLFQLVVSLGL-------IPTKETYTSMISCYCK 545
Query: 442 KGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+GD++ K F + + +F Y +LI K + D KL MI G P
Sbjct: 546 EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 168/393 (42%), Gaps = 20/393 (5%)
Query: 29 FRFLCTESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSND-VFHAINRLRKLK 87
F+ E+ Q+ L IE PV LR + DG D V + R ++LK
Sbjct: 68 FKDAADETDQKRWRGLMLEIESTGSAVPV---LRQYKTDGDQGLPRDLVLGTLVRFKQLK 124
Query: 88 MNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVP--SEFQNELLY 145
E++EW+ + + E+D+ L+ KL + E++ + + N + Y
Sbjct: 125 KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISY 184
Query: 146 NNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK-----NMMPKL 200
L+ + G + +RM+ G S + + IIL + K + L
Sbjct: 185 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ--IILKTFVEGDKFKEAEEVFETL 242
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAHA 259
L + K+ + P Y++++ + N E + FS M + V + ++Y ++++ +
Sbjct: 243 LDEKKS-PLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS 301
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRT-K 318
++ + +++S + + +L+ YG +E V+ + + T K
Sbjct: 302 YKEVSKI----YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHK 357
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y + ++AF G +E+A+ ++ M + + + +M++ Y ++ A + +K +
Sbjct: 358 AYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 417
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
K +G + N +TY L G K+ E+ ++ E
Sbjct: 418 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 282 NWSTLDVLLIL--YGYLGNRKELERVWSNIRELPFV-RTKSYMLAIEAFGRIGHLERAEE 338
N+S +D L+++ YG LGN ERV S + ++ SY +E++GR G AE
Sbjct: 143 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA 202
Query: 339 IWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM---KANGCKANAITYRQLAL 395
I+ M+S+ S + ++ + + +A +++ + K + K + Y +
Sbjct: 203 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 262
Query: 396 GCLKSGMEEQALKTLE--LGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFE 453
K+G E+A K +GK +P + NS ET+ + V K+++
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY------------KEVSKIYD 310
Query: 454 ELHKSKYCRYTFVYNTLIKAYAKAKIYDPKL--LRRMILGGARP 495
++ +S Y LIKAY +A+ + L M+ G RP
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 18/289 (6%)
Query: 195 NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCIL 254
N ++L+ + TP+V +Y LM+ N F M+ EP+ I+Y I+
Sbjct: 163 NGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQII 222
Query: 255 AYAHAVARLNTAAETYVEAV---EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI-- 309
AE E + +KS + +++ +Y GN ++ +V+S++
Sbjct: 223 LKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVG 282
Query: 310 RELP-FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVI 368
+ +P T + +++ E + +I+ +M+ + V + ++ Y +
Sbjct: 283 KGVPQSTVTYNSLMSFET-----SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 337
Query: 369 DKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPW 428
++A +++ M G + Y L SGM EQA + +R I P
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI-------FPD 390
Query: 429 LETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
L + +++ + D+E EK F+ + + Y TLIK YAKA
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 439
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 168/393 (42%), Gaps = 20/393 (5%)
Query: 29 FRFLCTESTQQTQDNLCRRIEKLPKGEPVGSALRSWMRDGFPVRSND-VFHAINRLRKLK 87
F+ E+ Q+ L IE PV LR + DG D V + R ++LK
Sbjct: 61 FKDAADETDQKRWRGLMLEIESTGSAVPV---LRQYKTDGDQGLPRDLVLGTLVRFKQLK 117
Query: 88 MNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVP--SEFQNELLY 145
E++EW+ + + E+D+ L+ KL + E++ + + N + Y
Sbjct: 118 KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISY 177
Query: 146 NNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK-----NMMPKL 200
L+ + G + +RM+ G S + + IIL + K + L
Sbjct: 178 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ--IILKTFVEGDKFKEAEEVFETL 235
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAHA 259
L + K+ + P Y++++ + N E + FS M + V + ++Y ++++ +
Sbjct: 236 LDEKKS-PLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS 294
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRT-K 318
++ + +++S + + +L+ YG +E V+ + + T K
Sbjct: 295 YKEVSKI----YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHK 350
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y + ++AF G +E+A+ ++ M + + + +M++ Y ++ A + +K +
Sbjct: 351 AYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 410
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
K +G + N +TY L G K+ E+ ++ E
Sbjct: 411 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 282 NWSTLDVLLIL--YGYLGNRKELERVWSNIRELPFV-RTKSYMLAIEAFGRIGHLERAEE 338
N+S +D L+++ YG LGN ERV S + ++ SY +E++GR G AE
Sbjct: 136 NFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA 195
Query: 339 IWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM---KANGCKANAITYRQLAL 395
I+ M+S+ S + ++ + + +A +++ + K + K + Y +
Sbjct: 196 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 255
Query: 396 GCLKSGMEEQALKTLE--LGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFE 453
K+G E+A K +GK +P + NS ET+ + V K+++
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY------------KEVSKIYD 303
Query: 454 ELHKSKYCRYTFVYNTLIKAYAKAKIYDPKL--LRRMILGGARP 495
++ +S Y LIKAY +A+ + L M+ G RP
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 18/289 (6%)
Query: 195 NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCIL 254
N ++L+ + TP+V +Y LM+ N F M+ EP+ I+Y I+
Sbjct: 156 NGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQII 215
Query: 255 AYAHAVARLNTAAETYVEAV---EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI-- 309
AE E + +KS + +++ +Y GN ++ +V+S++
Sbjct: 216 LKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVG 275
Query: 310 RELP-FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVI 368
+ +P T + +++ E + +I+ +M+ + V + ++ Y +
Sbjct: 276 KGVPQSTVTYNSLMSFET-----SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 330
Query: 369 DKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPW 428
++A +++ M G + Y L SGM EQA + +R I P
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI-------FPD 383
Query: 429 LETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
L + +++ + D+E EK F+ + + Y TLIK YAKA
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 432
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 133/332 (40%), Gaps = 30/332 (9%)
Query: 105 YRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEY 164
++ RE D S + F + H + F R+ + + C +K I + +
Sbjct: 529 HKSRENDASMVKGFCAA-GCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDL 587
Query: 165 MKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK---LLTQMKADKVTPHVSTYNILMK 221
+ RM +LG ++ +LI R N + K + K+ P + TY I++
Sbjct: 588 LDRMWKLGVEPEKSMYGKLI----GAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 222 IEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA---VARLNTAAETYVEAVEKSM 278
+ + F MK R V+P+ ++Y +L + + R A + + V ++
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTI 703
Query: 279 TGNNWSTLDVLLILYGYLGNRKELERVWSNI---------------RELPFVRTKS---- 319
N + L+ L +Y + K E V + RE+ K
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFY 763
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y + I+ +IG L A+ I+ +M + + +++ CK G + +A ++ M
Sbjct: 764 YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMI 823
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
+G K + + Y L GC ++G +A+K ++
Sbjct: 824 ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVK 855
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 151/382 (39%), Gaps = 17/382 (4%)
Query: 81 NRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQ 140
N L L+ N+ AL++ ++ RP P +D++ L+ K+ L +
Sbjct: 46 NGLHSLQFNE-ALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGV 103
Query: 141 NELLYN-NLVIACL-DKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP 198
+ LY NL++ C L+ ++ +M +LG+ + F LI + + M
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM- 162
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
++ QM + P V Y ++ ++ + F M+ + P+ + Y L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RT 317
+ A++ + + K + T + L+ + G + E +++ + +
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 318 KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKN 377
+Y I F G ++ A +++ ME+ V + S++ +CK +D A +++
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 378 MKANGCKANAITYRQLALGCLKSGMEEQALKTLE--LGKRLPINKRVRNSTPWLETTLSI 435
M G N ITY L G + G A + + + +P N R N +
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYN---------VL 393
Query: 436 VEIFAEKGDVENVEKLFEELHK 457
+ G V+ +FE++ K
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQK 415
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 6/208 (2%)
Query: 204 MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VAR 262
M+ P V Y L+ +++ M+ F M + + N I+Y L V +
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 263 LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI--RELPFVRTK-- 318
N A E + V + + N T +VLL Y G K+ ++ ++ RE+ V
Sbjct: 368 PNVAQEVFSHMVSRGVPPN-IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y + + G LE+A ++ +M + + + ++ CK G + A L+ ++
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQA 406
+ G K N +TY + G + G++ +A
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEA 514
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 142/345 (41%), Gaps = 28/345 (8%)
Query: 163 EYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKI 222
E ++M E G S VF L+ L++ + + T+M+ + + YN LM
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL-VIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 223 EANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNN 282
+++E + F+ M+ + ++P+ +Y IL A+A ET + +E N
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 283 WSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK---------SYMLAIEAFGRIGHL 333
+ L+ YG + S++ F+R K SY I A+ G
Sbjct: 449 VKSYTCLISAYGRT-------KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 334 ERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
E+A + EM +G+K SVE + S++ + + G K ++K M K ITY
Sbjct: 502 EKAYASFEEM-CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560
Query: 393 LALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLF 452
L G K G+ +A + ++ + P + T ++ +A G + +L
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQ-------PSVMTYNMLMNAYARGGQDAKLPQLL 613
Query: 453 EELHKSKYCRYTFVYNTLIKAYAKAKIYDPKLL--RRMILGGARP 495
+E+ + Y+T+I A+ + + + + M+ G P
Sbjct: 614 KEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 210 TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAE 268
+P V T+N ++ + ++ M+ + R + N +Y L + V LN A +
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 269 TYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR----TKSYMLAI 324
+ E + + + T+ ++LYG+ N K LE + + T +Y + I
Sbjct: 489 LFQEMISHGVCPD---TITCNILLYGFCENEK-LEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 325 EAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCK 384
+ ++ A +++ + V+ +N M++ +C I A L+ MK NG +
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 385 ANAITYRQLALGCLKSGMEEQALKTL 410
+ TY L GCLK+G +++++ +
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 119/291 (40%), Gaps = 20/291 (6%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+LL M ++ P V T+N L+ E L + M R + P+ ++Y + Y
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 259 AV-ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP---- 313
R + A + M + T + ++ +Y K ++ +RE+
Sbjct: 412 CKHNRFDDAKHMF-----DLMASPDVVTFNTIIDVY---CRAKRVDEGMQLLREISRRGL 463
Query: 314 FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
T +Y I F + +L A++++ EM S N ++ +C++ +++A
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL 433
L++ ++ + + + Y + G K ++A +L LPI+ P ++T
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA---WDLFCSLPIH----GVEPDVQTYN 576
Query: 434 SIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKL 484
++ F K + + LF ++ + + YNTLI+ KA D +
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 36/395 (9%)
Query: 80 INRLRKLKMNKRALEVMEWVIRERP-----YRPRELDYSYLVEFTTKLHGISHGEKLFTR 134
IN L K + ALEV E + +R + + ++ L++ K+ + E+L R
Sbjct: 336 INTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVR 395
Query: 135 VPSEFQ---NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI---ILHS 188
+ E + N + YN L+ G + + E + RM+E + + N ++ H
Sbjct: 396 MKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 189 SPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPN- 247
NM M+ + V +V TY L+ + N+E M ++ M P+
Sbjct: 456 G----LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 248 EISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLL--ILYGYLGNRKELERV 305
+I Y +++ V R + A + VEK G +LD+L +L G ++ E+V
Sbjct: 512 KIYYALISGLCQVRRDHDA----IRVVEKLKEGG--FSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 306 WSNIRELPFVRTK----SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTV 361
+ + ++ K +Y I FG+ E E + +M +V + +++
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 362 YCKHGVIDKAARLYKNMKANG-CKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINK 420
YC G +D+A +L+K+M + N + Y L K G QAL E K K
Sbjct: 626 YCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM----K 681
Query: 421 RVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEEL 455
VR P +ET ++ + EK E + KL +E+
Sbjct: 682 MVR---PNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 133/343 (38%), Gaps = 42/343 (12%)
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
R N +L+ + +K +N L+ ++ + M ++ P+ ++
Sbjct: 274 RANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 253 ILAYAHAVAR-LNTAAETYVEAVEKSMTGNN--------WSTLDVLLILYGYLGNRKELE 303
IL +R ++ A E + + K N ++TL L G L +EL
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL- 392
Query: 304 RVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYC 363
V + E +Y I+ + R G LE A+E+ M+ + +V N+++ C
Sbjct: 393 LVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 364 KHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQAL----KTLELGKRLPIN 419
+H ++ A + +M+ G K N +TY L C E+A+ K LE G P
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS-PDA 511
Query: 420 K----------RVRNSTPWLETTLSIVE---------------IFAEKGDVENVEKLFEE 454
K +VR + + E +F +K + E V ++ +
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 455 LHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
+ K + YNTLI + K K ++ +++ +M G P
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y I + G + A + +ME K V +N+++ CK+ +D A L+ M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 379 KANGCKANAITYRQLALGCLKS-GMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
+ G K + TY L + CL + G A RL + +N P L ++++
Sbjct: 277 ETKGIKPDVFTYNPL-ISCLCNYGRWSDA-------SRLLSDMLEKNINPDLVFFNALID 328
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFV-YNTLIKAYAKAK 478
F ++G + EKL++E+ KSK+C V YNTLIK + K K
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 156/384 (40%), Gaps = 28/384 (7%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGI------SHGEKLFTR-VPSEFQNELLYNNLVIACLD 154
E Y+P V FTT +HG+ S L R V Q +L+ VI L
Sbjct: 173 EMGYQPDT------VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 155 K-GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP--KLLTQMKADKVTP 211
K G L+L + +M + +++N +I K+M L +M+ + P
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTII---DGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 212 HVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETY 270
V TYN L+ N + R S M + + P+ + + L A +L A + Y
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 271 VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RTKSYMLAIEAFGR 329
E V+ + + L+ + +E V+ + + V T +Y I F +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 330 IGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAIT 389
+ A+ ++ +M S + +N ++ C +G ++ A +++ M+ K + +T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 390 YRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVE 449
Y + K+G +E G L + ++ P + T +++ F KG E +
Sbjct: 464 YTTMIEALCKAG-------KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 450 KLFEELHKSKYCRYTFVYNTLIKA 473
LF E+ + + YNTLI+A
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 199 KLLTQM-KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYA 257
KL +M K+ P V YN L+K +E M F M R + N ++Y L +
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 258 HAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VR 316
AR A+ + + + T ++LL GN + V+ +++ +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLY 375
+Y IEA + G +E +++ + S KG+K +V + +MM+ +C+ G+ ++A L+
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQA 406
MK +G N+ TY L L+ G E +
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 126/305 (41%), Gaps = 56/305 (18%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-----CIL 254
LL +M+ K+ V YN ++ ++++ F+ M+ + ++P+ +Y C+
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 255 AYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF 314
Y R + A+ + +EK++ + L+ + L
Sbjct: 297 NYG----RWSDASRLLSDMLEKNINPD--------LVFFNAL------------------ 326
Query: 315 VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAK-GLKSVEQFNSMMTVYCKHGVIDKAAR 373
I+AF + G L AE+++ EM +K V +N+++ +CK+ +++
Sbjct: 327 ---------IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNST-PWLETT 432
+++ M G N +TY L G ++ + A ++ + V + P + T
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA--------QMVFKQMVSDGVHPDIMTY 429
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA-KIYDP-KLLRRMIL 490
+++ G+VE +FE + K Y T+I+A KA K+ D L + L
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 491 GGARP 495
G +P
Sbjct: 490 KGVKP 494
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 180/462 (38%), Gaps = 70/462 (15%)
Query: 73 SNDVFHAINRLRKLKMNKRA-LEVMEWVIRERPYRP-------------RELDY----SY 114
S+++ ++I LR+L++N A LE+ +++ +RP R +Y SY
Sbjct: 69 SDELLNSI--LRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSY 126
Query: 115 LVEFTTKLHG--ISHGEKLFTRVPSEFQ-NELLYNNLVIACLDKGVIRLSLEYMKRMREL 171
L E H + GE RV EF + +++ ++ +KG+++ +L M
Sbjct: 127 LCELVALNHSGFVVWGE--LVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNY 184
Query: 172 G-YP-------------------ISHLVFNRLIILHSSPSL-----------RKNMMPKL 200
G P ++ V++++I SP + R + K
Sbjct: 185 GRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA 244
Query: 201 LTQMKADKVTP----HVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAY 256
+ K + + +V TYN L+ A ++E + R LM R V N ++Y L
Sbjct: 245 MVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIK 304
Query: 257 AHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR 316
+ L AE E +++ + VL+ Y G ++ RV N+ E+ VR
Sbjct: 305 GYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG-VR 363
Query: 317 TKSYML--AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARL 374
T + + I + + G L AE+I+ M +N+++ YC+ G +D+A +L
Sbjct: 364 TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
Query: 375 YKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS 434
M +TY L G + G L ++ + +N + + LE
Sbjct: 424 CDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Query: 435 IVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+ GD KL+E + T N +I K
Sbjct: 484 L-------GDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 518
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 135/317 (42%), Gaps = 15/317 (4%)
Query: 179 VFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSL 238
V+ LI ++ L L P V T+ +L+ + +
Sbjct: 181 VYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLE 240
Query: 239 MKLRQVEPNEISYCILAYAHAVARLNTAAETYV-EAVEKSMTGNNWSTLDVLLILYGYLG 297
M V + ++Y + + A + E+ + + +E + + TL+ ++ YG
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGR 300
Query: 298 NRKELERVWSNIREL---PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQ 354
N +++E +S + + P + T + + I +FG+ G ++ + ME +
Sbjct: 301 NMRKMESWYSRFQLMGVQPDITT--FNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 355 FNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGK 414
+N ++ + K G I+K +++ MK G K N+ITY L K+G+ + L
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVL---- 414
Query: 415 RLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY 474
R +N V TP+ I+ + + GD+ +++L+ ++ + K + T+IK Y
Sbjct: 415 RQIVNSDVVLDTPFFN---CIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
Query: 475 AKAKIYDP--KLLRRMI 489
I+D +L ++MI
Sbjct: 472 TAHGIFDAVQELEKQMI 488
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 122/281 (43%), Gaps = 13/281 (4%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
+ L+ C G L + M LG S + +N +I + + + M L +
Sbjct: 218 FTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMI 277
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLN 264
+ P V T N ++ N N+ + ++S +L V+P+ ++ IL + A +
Sbjct: 278 EDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMY 337
Query: 265 TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK----SY 320
+ ++ +EK T ++++ +G G ++++ V+ R++ + K +Y
Sbjct: 338 KKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF---RKMKYQGVKPNSITY 394
Query: 321 MLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKA 380
+ A+ + G + + + + ++ ++ + FN ++ Y + G + LY M+
Sbjct: 395 CSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEE 454
Query: 381 NGCKANAITYRQL-----ALGCLKSGME-EQALKTLELGKR 415
CK + IT+ + A G + E E+ + + ++GK+
Sbjct: 455 RKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIGKK 495
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 210 TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAAE 268
+P V T+N ++ + ++ M+ + R + N +Y L + V LN A +
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 269 TYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR----TKSYMLAI 324
+ E + + + T+ ++LYG+ N K LE + + T +Y + I
Sbjct: 489 LFQEMISHGVCPD---TITCNILLYGFCENEK-LEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 325 EAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCK 384
+ ++ A +++ + V+ +N M++ +C I A L+ MK NG +
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 385 ANAITYRQLALGCLKSGMEEQALKTL 410
+ TY L GCLK+G +++++ +
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 119/291 (40%), Gaps = 20/291 (6%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+LL M ++ P V T+N L+ E L + M R + P+ ++Y + Y
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 259 AV-ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP---- 313
R + A + M + T + ++ +Y K ++ +RE+
Sbjct: 412 CKHNRFDDAKHMF-----DLMASPDVVTFNTIIDVY---CRAKRVDEGMQLLREISRRGL 463
Query: 314 FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
T +Y I F + +L A++++ EM S N ++ +C++ +++A
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL 433
L++ ++ + + + Y + G K ++A +L LPI+ P ++T
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA---WDLFCSLPIH----GVEPDVQTYN 576
Query: 434 SIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKL 484
++ F K + + LF ++ + + YNTLI+ KA D +
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 16/300 (5%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSE--FQNELLYNNLVIACLDKGVIR 159
ER P L ++ L+ + K + EKL + F + + YN+++
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN--- 415
Query: 160 LSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNIL 219
+ K M +L + FN +I ++ R + +LL ++ + + +TYN L
Sbjct: 416 -RFDDAKHMFDLMASPDVVTFNTIIDVYCRAK-RVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 220 MKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSM 278
+ NL F M V P+ I+ IL Y +L A E + E ++ M
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQ--M 530
Query: 279 TGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF----VRTKSYMLAIEAFGRIGHLE 334
+ + T+ +I++G K ++ W LP ++Y + I F +
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSK-VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 335 RAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLA 394
A ++ +M+ +N+++ K G IDK+ L M++NG +A T + +A
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA 649
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 148/347 (42%), Gaps = 26/347 (7%)
Query: 83 LRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFT--------R 134
LR + AL+ W R+ YR + Y ++E +K ++ R
Sbjct: 181 LRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYR 240
Query: 135 VPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK 194
P F + ++++ G +R +L+ + M+ G + L+ N I + +R
Sbjct: 241 TPEAF------SRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVF----VRA 290
Query: 195 NMMPK---LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
N + K L +M+ + P+V TYN +++ + H +E + M + P+++SY
Sbjct: 291 NRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSY 350
Query: 252 -CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR 310
I+ Y R+ + + ++ + T + L+ + + E + +
Sbjct: 351 YTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQ 410
Query: 311 ELPF-VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKG--LKSVEQFNSMMTVYCKHGV 367
E F + Y + A + G + A+++ EM S KG V + +++ +C+ G
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS-KGHCPPDVVTYTAVVNGFCRLGE 469
Query: 368 IDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGK 414
+DKA +L + M +G K N ++Y L G ++G +A + + + +
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 516
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 20/283 (7%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
+L QM+ + P V TY+ L+ E+ ++ F M R + PN++ + L + H
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 259 A-VARLNTAAETYVEAVEKSMTGNNWSTLDVLL---ILYGYLGNRKELER---VWSNIRE 311
+ ++ E+Y + + K + D++L ++ G+ N + V IR
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQP------DIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 312 LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
+Y I+ F R G +E A EI EM+ F++++ CK G + A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLET 431
R + M G K + +TY + K G + K L K + + V P + T
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL---KEMQSDGHV----PSVVT 522
Query: 432 TLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY 474
++ + G ++N + L + + YNTL++ +
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 115/256 (44%), Gaps = 14/256 (5%)
Query: 161 SLEYMKRMREL-GYPISHLVFNRLI--ILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYN 217
+L+ KRMRE+ G + +N L+ + + ++ + L + V P++ TYN
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK---VESLFAYFETAGVAPNLQTYN 153
Query: 218 ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA-RLNTAAETYVEAVEK 276
+L+K+ + E F M +P+ SY + A A +L+ A E + E E+
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE----LPFVRTKSYMLAIEAFGRIGH 332
+ + + ++L+ + + K +W + E P V+T + M I + G
Sbjct: 214 GVAPDV-TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM--ISGLSKCGR 270
Query: 333 LERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
++ +IW M+ + K + ++S++ C G +DKA ++ + + +TY
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 393 LALGCLKSGMEEQALK 408
+ G + G +++L+
Sbjct: 331 MLGGFCRCGKIKESLE 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/464 (20%), Positives = 175/464 (37%), Gaps = 76/464 (16%)
Query: 59 SALRSWMRDGFPVRSNDVFHAINRLRKLKMNKRA--------LEVMEWVIRERPYR---- 106
S ++++ ++ P ++ DVF + + + R+ +E +WV E +
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 107 ----PRELDYSYLVEFTTKLHGISHGEKLFTRVPSE-FQNELLYNNLVIACLDK-GVIRL 160
P Y+ L++ + K + E F+ ++ + VI L K G +
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 161 SLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILM 220
+LE M E G +N LI K M ++ V P+V T+NI++
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 221 KIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTG 280
+ +++ ++ + MK + E + +Y L + A
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA------------------- 303
Query: 281 NNWSTLDVLLILYGYLGNRKELERVWSNIRE-LPFVRTKSYMLAIEAFGRIGHLERAEEI 339
GN + E V++ + E + +Y + F R G ++ + E+
Sbjct: 304 ----------------GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347
Query: 340 WLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLK 399
W ME + V +N ++ ++G ID+A +++ M A G A+ TY G
Sbjct: 348 WRIMEHKNSVNIV-SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 400 SGMEEQALKTLELGKRLPINKRVRNSTPWLE--TTLSIVEIFAEKGDVENVEKLFEELHK 457
+G +AL ++ V +S L+ SI++ +K +E L +E+ K
Sbjct: 407 NGYVNKALGVMQ---------EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Query: 458 SKYCRYTFVYNTLIKAYAKAKIYDPKL------LRRMILGGARP 495
+ V N LI I D +L LR M G RP
Sbjct: 458 HGVELNSHVCNALIGGL----IRDSRLGEASFFLREMGKNGCRP 497
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 109/222 (49%), Gaps = 8/222 (3%)
Query: 254 LAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELP 313
LA A++ + +++ ++ ++++ T L+V+L +G G ++L +++ +++
Sbjct: 70 LARKSAISEVQRSSD-FLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG 128
Query: 314 FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
+ +Y I+ G ++ +A EI+ + +V NS+++ K+G +D +
Sbjct: 129 KISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIK 187
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL 433
L+ MK +G K + +TY L GC+K ++ K +EL LP N +S +
Sbjct: 188 LFDQMKRDGLKPDVVTYNTLLAGCIK--VKNGYPKAIELIGELPHNGIQMDSVMY----G 241
Query: 434 SIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA 475
+++ I A G E E +++ + + Y++L+ +Y+
Sbjct: 242 TVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS 283
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 123/285 (43%), Gaps = 11/285 (3%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHN-LENLMRFFSLMKLRQVEPNEISY-CILAY 256
KL QMK D + P V TYN L+ N + + ++ + + Y +LA
Sbjct: 187 KLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAI 246
Query: 257 AHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR 316
+ R + AE +++ ++ N LL Y + G+ K+ + + + ++ + V
Sbjct: 247 CASNGR-SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVP 305
Query: 317 TKSYMLAI-EAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
K M + + + + G +R+ E+ E+ESA ++ + +M K G +++A ++
Sbjct: 306 NKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIF 365
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
+MK G +++ + +S K + K L + L ++
Sbjct: 366 DDMKGKGVRSDGYANSIMISALCRS-------KRFKEAKELSRDSETTYEKCDLVMLNTM 418
Query: 436 VEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
+ + G++E+V ++ +++ + ++ LIK + K K++
Sbjct: 419 LCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLH 463
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 150/390 (38%), Gaps = 68/390 (17%)
Query: 102 ERPYRPRELDYSYLVEFTTKLHGI------SHGEKLFTR-VPSEFQNELL-YNNLVIACL 153
E Y+P V FTT +HG+ S L R V Q +L+ Y +V
Sbjct: 176 EMGYKPDT------VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 154 DKGVIRLSLEYMKRMRELGYPISHLVFNRLI-----ILHSSPSLRKNMMPKLLTQMKADK 208
+G L+L + +M + ++++ +I H +L L T+M+
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL------NLFTEMENKG 283
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAA 267
V P+V TY+ L+ N + R S M R++ PN +++ L A +L A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAF 327
+ Y E +++S+ N ++ Y I F
Sbjct: 344 KLYEEMIKRSIDPNIFT-----------------------------------YSSLINGF 368
Query: 328 GRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANA 387
+ L A+++ M L +V +N+++ +CK +DK L++ M G N
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 388 ITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVEN 447
+TY L G ++ + A + + ++ P + T +++ + G +
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH-------PNILTYNILLDGLCKNGKLAK 481
Query: 448 VEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+FE L +S + YN +I+ KA
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYK 376
TK + L + + ++G + +E W +M++ K + ++ M + CK G KA +LYK
Sbjct: 189 TKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYK 248
Query: 377 NMKANGCKANAITYRQL--ALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS 434
MK+ K + + Y + A+G A + +E G R+ R R P + T +
Sbjct: 249 EMKSRRMKLDVVAYNTVIRAIG---------ASQGVEFGIRVFREMRERGCEPNVATHNT 299
Query: 435 IVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDPKLLRRMILGGA 493
I+++ E G + + ++ +E+ K + Y L K ++I L RMI G
Sbjct: 300 IIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEIL--SLFGRMIRSGV 357
Query: 494 RP 495
RP
Sbjct: 358 RP 359
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 51/326 (15%)
Query: 161 SLEYMKRMRELGY--PISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNI 218
+LE +RE + P L++L S + N KL +M + + P V Y
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSG--QPNRAQKLFDEMLEEGLEPTVELYTA 164
Query: 219 LMKIEANEHNLENLMRFFSLMK-LRQVEPNEISYCILAYAHAVA-RLNTAAETYVEAVEK 276
L+ + +++ MK Q +P+ +Y L A A + + Y E E+
Sbjct: 165 LLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDER 224
Query: 277 SMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERA 336
+T N T+ ++L GY GR+G ++
Sbjct: 225 LITPN---TVTQNIVLSGY--------------------------------GRVGRFDQM 249
Query: 337 EEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLAL 395
E++ +M + K V N +++V+ G ID Y+ + G + T+ L
Sbjct: 250 EKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIG 309
Query: 396 GCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS-IVEIFAEKGDVENVEKLFEE 454
K M ++ +E ++L PW +T + I+E FA+ GD +N+E F++
Sbjct: 310 SYGKKRMYDKMSSVMEYMRKLEF--------PWTTSTYNNIIEAFADVGDAKNMELTFDQ 361
Query: 455 LHKSKYCRYTFVYNTLIKAYAKAKIY 480
+ T + LI YA A ++
Sbjct: 362 MRSEGMKADTKTFCCLINGYANAGLF 387
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/414 (17%), Positives = 164/414 (39%), Gaps = 50/414 (12%)
Query: 74 NDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFT 133
N V ++ L K +ALEV + + + Y+P+E Y L+ K + +KLF
Sbjct: 89 NTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD 148
Query: 134 RVPSEFQNEL--LYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPS 191
+ E LY L+ A Y S+L+ + IL S
Sbjct: 149 EMLEEGLEPTVELYTALLAA---------------------YTRSNLIDDAFSILDKMKS 187
Query: 192 LRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
+ P V TY+ L+K + + + + M R + PN ++
Sbjct: 188 F--------------PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQ 233
Query: 252 CILAYAHA-VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR 310
I+ + V R + + + + + + T++++L ++G +G +E + R
Sbjct: 234 NIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFR 293
Query: 311 ELPF-VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVID 369
T+++ + I ++G+ ++ + M + + +N+++ + G
Sbjct: 294 NFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAK 353
Query: 370 KAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKR--LPINKRVRNSTP 427
+ M++ G KA+ T+ L G +G+ + + +++L + +P N N
Sbjct: 354 NMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYN--- 410
Query: 428 WLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
+++ A+ D+ +E+++ + + + + + +++AY K + D
Sbjct: 411 ------AVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMND 458
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 303 ERVWSNIRELP----FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSM 358
E +W +R+ P T +Y L I F G L A+ + EM+ V + SM
Sbjct: 148 EALWV-LRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 359 MTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL 410
+ YC G ID A RL K M + C N++TY ++ G KSG E+AL+ L
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 145/363 (39%), Gaps = 15/363 (4%)
Query: 133 TRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSL 192
+R P + LYN L+ +C+ + + K M G FN LI S
Sbjct: 103 SRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSC 162
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC 252
+ +L +M P+ T+ IL++ + + + M+ V PN++ Y
Sbjct: 163 V-DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYN 221
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR-- 310
+ + N +E VE + + + T + + G + R++S++
Sbjct: 222 TIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 311 ---ELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGV 367
LP + +Y L ++ F ++G LE A+ ++ + L S++ +N + +HG
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 368 IDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTP 427
+A + K M G + +Y L G K GM A + L KR P
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR-------NGVCP 394
Query: 428 WLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDP-KLL 485
T ++ + G V+ + L +E+ ++ + N L+ + K +I + +LL
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 486 RRM 488
R+M
Sbjct: 455 RKM 457
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 125/315 (39%), Gaps = 57/315 (18%)
Query: 204 MKADKVTPHVSTYNILM-------KIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAY 256
MK + V P TY L+ K++A + L+ +MR L PN + IL +
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-------PNAYTCNILLH 439
Query: 257 A-HAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE---- 311
+ + R++ A E + EK G T+ +I+ G G+ EL++ ++
Sbjct: 440 SLWKMGRISEAEELLRKMNEK---GYGLDTVTCNIIVDGLCGS-GELDKAIEIVKGMRVH 495
Query: 312 -------------------------LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESA 346
LP + T S +L + G A+ ++ EM
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL--NGLCKAGRFAEAKNLFAEMMGE 553
Query: 347 KGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA 406
K +N + +CK G I A R+ K+M+ GC + TY L LG G++ Q
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL---GIKNQI 610
Query: 407 LKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFV 466
+ L + + + +P + T + ++ E VE+ L +E+ + F
Sbjct: 611 FEIHGLMDEM----KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 467 YNTLIKAYAKAKIYD 481
+ LI+A+ K +D
Sbjct: 667 FKYLIEAFCKVPDFD 681
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 170/446 (38%), Gaps = 62/446 (13%)
Query: 92 ALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNE---LLYNNL 148
+L+ + +++ R Y P ++ +V F KL + E + +P F E + YN+L
Sbjct: 40 SLKFLAYLV-SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMP-RFGCEPDVISYNSL 97
Query: 149 VIACLDKGVIR---LSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMK 205
+ G IR L LE ++ + FN L S + + + +K
Sbjct: 98 IDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK 157
Query: 206 ADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAYAHAVARLN 264
+P+V TY+ + L+ ++ F MK + PN +++ C++ L
Sbjct: 158 C--CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 215
Query: 265 TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRE------------- 311
A Y E M+ N T L+ + G + E ++S + E
Sbjct: 216 VAVSLYKEMRRVRMS-LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 312 ----------------LPFVRTKSYMLAIEAFGRI-------GHLERAEEIWLEMESAKG 348
L + + L I A+G I G L+ A EI +ME +
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Query: 349 LKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
+ + F +MM Y K G + A +Y + G + + + + G K+G +A+
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Query: 409 TLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYN 468
+ K + V +++ ++GD VE+LF ++ ++ F+Y
Sbjct: 395 YFCIEKANDVMYTV------------LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYT 442
Query: 469 TLIKAYAK-AKIYDP-KLLRRMILGG 492
+ I K + D KL RM+ G
Sbjct: 443 SWIAGLCKQGNLVDAFKLKTRMVQEG 468
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 19/306 (6%)
Query: 157 VIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
++R +L+++ R+R+ N+ I +++S+ + + K L + + TPH S
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGI---LSLKFLAYLVSRGYTPHRS 57
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAV 274
++N ++ ++ M EP+ ISY L H +A +E++
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 275 EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL-----PFVRTKSYMLAIEAFGR 329
S + L+ K L+ V+ + + P V T Y I+ F +
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVT--YSTWIDTFCK 175
Query: 330 IGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAIT 389
G L+ A + + M+ +V F ++ YCK G ++ A LYK M+ N +T
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 390 YRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVE 449
Y L G K G ++A E+ R+ ++ NS + +I++ F ++GD +N
Sbjct: 236 YTALIDGFCKKGEMQRA---EEMYSRMVEDRVEPNSLVY----TTIIDGFFQRGDSDNAM 288
Query: 450 KLFEEL 455
K ++
Sbjct: 289 KFLAKM 294
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 296 LGNRKELERVWSNIRE-LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQ 354
G +E++R+++ + E L ++ + + ++G++ A++ + A
Sbjct: 133 FGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFT 192
Query: 355 FNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGK 414
+ S +T +C+ +D A +++K M NGC N ++Y QL G ++ ++AL L
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLL---- 248
Query: 415 RLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAY 474
+ + N P + T +++ G LF+++ +S +Y LI+++
Sbjct: 249 ---VKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 475 AKAKIYD--PKLLRRMILGGARP 495
D LL M+ G P
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMP 328
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 12/300 (4%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
L+ M P+V YN ++ +L N + F M+ + + + ++Y L +
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSN-IRELPFVRTK 318
+ T A + + K N L+ + GN E ++ IR
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y I F G L A+ ++ M S V +N+++T +CK ++ +L+ M
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVR-NSTPWLETTLSIVE 437
G +A TY L G ++G A K N+ V +P + T +++
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF--------NRMVDCGVSPDIVTYNILLD 402
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPK--LLRRMILGGARP 495
G +E + E+L KS+ YN +I+ + L R + G +P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 160/380 (42%), Gaps = 50/380 (13%)
Query: 76 VFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRV 135
+ A R LK+ K EV + IR + + S +++ K I +K+F
Sbjct: 381 LMSAAARTENLKLGK---EVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 136 PSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKN 195
++ +L+N L+ A + G+ +L M+ G P + + +N LIIL + + +
Sbjct: 437 VE--KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWN-LIILSLLRNGQVD 493
Query: 196 MMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILA 255
+ QM++ + P++ ++ +M E + F M+ + PN S +
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Query: 256 YAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFV 315
A A + ++L + ++GY + N++ V
Sbjct: 554 SACA----------------------HLASLHIGRTIHGY---------IIRNLQHSSLV 582
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
++ + ++ + + G + +AE+++ +K + N+M++ Y +G + +A LY
Sbjct: 583 SIETSL--VDMYAKCGDINKAEKVF----GSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
++++ G K + IT + C +G QA++ I + R+ P LE +
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT-----DIVSK-RSMKPCLEHYGLM 690
Query: 436 VEIFAEKGDVENVEKLFEEL 455
V++ A G+ E +L EE+
Sbjct: 691 VDLLASAGETEKALRLIEEM 710
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 38/303 (12%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
YNNL++ L+KG+ + E + M + + + LII + S R + KL QM
Sbjct: 281 YNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTY-ELIIPSLAKSGRLDAAFKLFQQM 339
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA-RL 263
K K+ P S ++ L+ L+ M+ + M+ P+ + L ++A A +L
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 264 NTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS-YML 322
+TA + E ++KS N+ +++ + G + V+ ++ + F+ T S Y
Sbjct: 400 DTALRLWDE-MKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMT---------------------- 360
+E G ++ A +I+ M +A + + S++T
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Query: 361 ------------VYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
+Y K +D A + + M ++G K N RQL C+K+G+ + A
Sbjct: 519 YSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARP 578
Query: 409 TLE 411
LE
Sbjct: 579 LLE 581
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
+++ G+ G L+ + ++++EM+ S F S++ Y K G +D A RL+ MK +G
Sbjct: 355 VDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGF 414
Query: 384 KANAITYRQLALGCLKSGMEEQAL---KTLELGKRLPINKRVRNSTPWLETTLSIVEIFA 440
+ N Y + KSG E A+ K +E LP TP T ++E+ A
Sbjct: 415 RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP--------TP--STYSCLLEMHA 464
Query: 441 EKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
G V++ K++ + + Y +L+ A ++ D
Sbjct: 465 GSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVD 505
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 116/291 (39%), Gaps = 7/291 (2%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKL 200
NE+ Y L+ +G + +L + M + G + + + LI RK + L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK-LFFGL 669
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
L +M + P Y ++ ++ + + + LM PNE++Y +
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 261 ARLNTAAETYVEAVEKSMTGNNWSTLDVLL--ILYGYLGNRKELERVWSNIRELPFVRTK 318
A AE ++ + N T L + G + +K +E + ++ L T
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL-LANTA 788
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y + I F R G +E A E+ M + +M+ C+ + KA L+ +M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQA--LKTLELGKRL-PINKRVRNST 426
G + + + Y L GC +G +A L+ L + L P NK R +T
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 97/265 (36%), Gaps = 45/265 (16%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAA 267
V+P++ YN L+ F M + PN+++Y IL +L+TA
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAF 327
E V+ + L +Y Y I
Sbjct: 423 SFLGEMVDTGLK----------LSVY-------------------------PYNSLINGH 447
Query: 328 GRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANA 387
+ G + AE EM + K +V + S+M YC G I+KA RLY M G +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 388 ITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVR-NSTPWLETTLSIVEIFAEKGDVE 446
T+ L G ++G+ A+K N+ N P T ++E + E+GD+
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLF--------NEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 447 NVEKLFEELHKSKYCRYTFVYNTLI 471
+ +E+ + T+ Y LI
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLI 584
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 107/264 (40%), Gaps = 10/264 (3%)
Query: 148 LVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK--LLTQMK 205
L+ +C G + +LE K M + P +V+N +I S NM+ + M
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG---NMVAAYGFMCDMV 327
Query: 206 ADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNT 265
V P V TYN L+ E + M+ V P++ISY ++ +
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 266 AAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFVRTKSYML 322
A ++ ++ KS +V++ YG G+ V + + P V T + +
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNAL- 446
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG 382
I + + G L A + EM S K +N ++ C G + A +LY M G
Sbjct: 447 -IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 383 CKANAITYRQLALGCLKSGMEEQA 406
C+ + ITY +L G G ++A
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKA 529
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/362 (18%), Positives = 152/362 (41%), Gaps = 21/362 (5%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
Y++L+ G +R + M ++GYP +++ L+ S L + M + +M
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM-RFSVKM 487
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC------ILAYAH 258
+ +V +N L+ + + ++ F LM + ++P+ ++ I+ A
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL---PFV 315
T + ++++ + + +V++ L ++ + ++N+ E P +
Sbjct: 548 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
T + M+ + + L+ AE I+ ++ + ++ V CK+ +D A R++
Sbjct: 608 VTYNTMIC--GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
M G K NA+TY GCL + +E +L + + +P + + I
Sbjct: 666 SIMAEKGSKPNAVTY-----GCLMDWFSKSV--DIEGSFKLFEEMQEKGISPSIVSYSII 718
Query: 436 VEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK-AKIYDPKLL-RRMILGGA 493
++ ++G V+ +F + +K Y LI+ Y K ++ + LL M+ G
Sbjct: 719 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Query: 494 RP 495
+P
Sbjct: 779 KP 780
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 146/342 (42%), Gaps = 61/342 (17%)
Query: 105 YRPRELDYSYLVEFTTK----LHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRL 160
Y P + Y LV+ +K LH + K+ + S N +++N+L+ G RL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ--SIRLNVVVFNSLI-----DGWCRL 509
Query: 161 SL--EYMKRMRELG-YPISHLVFNRLIILHSS---PSLRKNMMP----KLLTQMKADKVT 210
+ E +K R +G Y I V ++ S + K+M P +L M+ +K++
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569
Query: 211 PHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETY 270
++ N+++ + H +E+ +FF+ + ++EP+ ++Y + + R AE
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 271 VEAVEKSMTGNNWSTLDVLL----------------------------ILYG----YLGN 298
E ++ + G N TL +L+ + YG +
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 299 RKELERVWSNIREL------PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSV 352
++E + E+ P + SY + I+ + G ++ A I+ + AK L V
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSI--VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 353 EQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLA 394
+ ++ YCK G + +AA LY++M NG K + + R L+
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 789
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKN 377
+Y I+ + + G L +++ + KG+K V F+S + VY K G + A+ +YK
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQ-ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 378 MKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
M G N +TY L G + G +A G+ L R P + T S+++
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGM--YGQILK-----RGMEPSIVTYSSLID 434
Query: 438 IFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
F + G++ + L+E++ K Y +Y L+ +K
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 88/174 (50%), Gaps = 29/174 (16%)
Query: 306 WSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKH 365
WS++ FV T + ++ F + ++ A +++ M + +N+M++ +C+
Sbjct: 84 WSDV----FVGTAT----VDMFVKCNSVDYAAKVFERMPE----RDATTWNAMLSGFCQS 131
Query: 366 GVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLE----LGKRLPINKR 421
G DKA L++ M+ N +++T L ++S E++LK LE +G RL ++ +
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTL----IQSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 422 VRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA 475
V + W+ T + + GD+++ + +FE + + R +N++ KAY+
Sbjct: 188 VTVANTWIST-------YGKCGDLDSAKLVFEAIDRGD--RTVVSWNSMFKAYS 232
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 119/270 (44%), Gaps = 16/270 (5%)
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAV 274
++N+++K + E++ E+ ++ F M+ + +P+E+++ + H+ Y +
Sbjct: 226 SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Query: 275 EKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR-TKSYMLAIEAFGRIGHL 333
S + L V + L E+V + + F S I +G+ G +
Sbjct: 286 RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKV 345
Query: 334 ERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK----ANGCKANAIT 389
+ AE ++ ++ + K +E +NS++T + G +D+A L+ ++ KAN +T
Sbjct: 346 KDAEHLFRQIRN----KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVT 401
Query: 390 YRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVE 449
+ + GC G + +LE +++ +K + NS T I+ I AE +
Sbjct: 402 WTSVIKGCNVQGRGDD---SLEYFRQMQFSKVLANSV----TICCILSICAELPALNLGR 454
Query: 450 KLFEELHKSKYCRYTFVYNTLIKAYAKAKI 479
++ + ++ V N L+ YAK +
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGL 484
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 39/246 (15%)
Query: 163 EYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKAD-KVTPHVSTYNILMK 221
E + M G ++H V+ L+ +S S R + LL +MK+ P V TY+IL+K
Sbjct: 171 ELFQEMINEGCVVNHEVYTALVSAYSR-SGRFDAAFTLLERMKSSHNCQPDVHTYSILIK 229
Query: 222 IEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYV---------- 271
+ + S M+ + + PN I+Y L A+ A++ E+ +
Sbjct: 230 SFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCK 289
Query: 272 --------------------------EAVEKSMTGNNWSTLDVLLILYGYLGNRKELERV 305
E + S N T ++LL YG GN K++ V
Sbjct: 290 PDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAV 349
Query: 306 WSNIRELPFVRT-KSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCK 364
+++ + T +Y + I+AFGR G L++ E ++ M+S + S S++ Y +
Sbjct: 350 MEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGR 409
Query: 365 HGVIDK 370
DK
Sbjct: 410 ASKADK 415
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 15/307 (4%)
Query: 155 KGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVS 214
+G + +L + RM E G+ + N L + + S LL++M+ + HV
Sbjct: 23 EGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALN-----LLSKMEETHIKAHVV 77
Query: 215 TYN-ILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEA 273
YN I+ ++ + H++ + F+ M + + P+ I+Y + + + T AE +
Sbjct: 78 IYNAIIDRLCKDGHHI-HAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRD 136
Query: 274 VEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSN-IRELPFVRTKSYMLAIEAFGRIGH 332
+ + + T L+ G E E ++ + +R F T +Y I+ F +
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 333 LERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQ 392
L A+ + M S V F++++ YCK +D ++ M G AN +TY
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 393 LALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLF 452
L G + G + A L + I+ V P T S++ K ++ +
Sbjct: 257 LIHGFCQVGDLDAAQDLL----NVMISSGV---APNYITFQSMLASLCSKKELRKAFAIL 309
Query: 453 EELHKSK 459
E+L KS+
Sbjct: 310 EDLQKSE 316
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 312 LPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKA 371
P V T S M I++F R G AE++ +M + V F++++ K G + +A
Sbjct: 108 FPDVITYSGM--IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLET 431
+Y +M G ITY + G K L KR+ + ++ +P + T
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQ-------DRLNDAKRMLDSMASKSCSPDVVT 218
Query: 432 TLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMI 489
+++ + + V+N ++F E+H+ T Y TLI + + D LL MI
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 490 LGGARP 495
G P
Sbjct: 279 SSGVAP 284
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 134/307 (43%), Gaps = 26/307 (8%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
+ ++K TP V TY L+ + + + +MK V+ N +Y ++ +
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI--NG 528
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLL---ILYGYLGNRKELERVWSNIRELPFVR 316
+L A + AV + M DV+L I+ + G ++R ++E+ +R
Sbjct: 529 FVKLKDWANAF--AVFEDMVKEGMKP-DVILYNNIISAFCG-MGNMDRAIQTVKEMQKLR 584
Query: 317 ----TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAA 372
T+++M I + + G + R+ E++ M + +V FN ++ + ++KA
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLE-- 430
+ M G AN TY ++ G G + GK R++N ++
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVG---------DTGKAFEYFTRLQNEGLDVDIF 695
Query: 431 TTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA-KAKIYD-PKLLRRM 488
T ++++ + G +++ + +E+ R +FVYN LI +A + +++ L+++M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 489 ILGGARP 495
G +P
Sbjct: 756 KKEGVKP 762
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 286 LDVLLILYGYLGNRKELERVWSNIRELPFVRT----KSYMLAIEAFGRIGHLERAEEIWL 341
D L + +L + + +++ F+ T +YM ++ GR+ + A +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV---DIALRFYR 227
Query: 342 EMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSG 401
EM K + N +M+ YC+ G +DK L ++M+ G +A ++Y L G + G
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 402 MEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYC 461
+ ALK + + + P + T +++ F ++ K+F E+
Sbjct: 288 LLSSALKLKNMMGKSGLQ-------PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 462 RYTFVYNTLIKAYAK 476
T YNTLI Y++
Sbjct: 341 PNTVTYNTLINGYSQ 355
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 16/293 (5%)
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VA 261
QMK P V + N M + ++ +RF+ M+ ++ PN + ++ +
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 262 RLNTAAETY--VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS 319
+L+ E +E + T +++TL G L + +L+ + P V T
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT-- 310
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
+ I F R L+ A +++ EM++ + +N+++ Y + G + A R Y++M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS-IVEI 438
NG + + +TY L G K + + K + K L V NS+ + + V
Sbjct: 371 CNGIQRDILTYNALIFGLCK---QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMI 489
A++G +L++ + +S +N L+ A+ + + +D ++LR M+
Sbjct: 428 NADRG-----FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 17/265 (6%)
Query: 153 LDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPH 212
LDKG+ E ++ M LG+ + + +N LI H L + + KL M + P+
Sbjct: 254 LDKGI-----ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL-KLKNMMGKSGLQPN 307
Query: 213 VSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVE 272
V T+N L+ L+ + F MK V PN ++Y L ++ + A + E
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 273 AVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL------PFVRTKSYMLAIEA 326
+ G L +++G L + + + ++EL P T S ++ +
Sbjct: 368 --DMVCNGIQRDILTYNALIFG-LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 327 FGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKAN 386
+ + +R E++ M + + + FN +++ +C++ D A+++ + M +
Sbjct: 425 VRK--NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 387 AITYRQLALGCLKSGMEEQALKTLE 411
+ T Q+ G G ++ K L+
Sbjct: 483 SRTVHQVCNGLKHQGKDQLVKKLLQ 507
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Query: 142 ELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHS-SPSLRKNMMPKL 200
++ YN L+ +KG++ +L+ M + G + + FN LI H +++ K+
Sbjct: 273 DVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI--HGFCRAMKLQEASKV 330
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
+MKA V P+ TYN L+ + + + E RF+ M ++ + ++Y L +
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 261 ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGN-RKELERVWSNIRELPFVRTKS 319
A +V+ ++K N ST L++ N + E S IR ++
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 320 YMLAIEAFGRIGHLERAEEIWLEM 343
+ + + AF R + A ++ EM
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREM 474
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 286 LDVLLILYGYLGNRKELERVWSNIRELPFVRT----KSYMLAIEAFGRIGHLERAEEIWL 341
D L + +L + + +++ F+ T +YM ++ GR+ + A +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV---DIALRFYR 227
Query: 342 EMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSG 401
EM K + N +M+ YC+ G +DK L ++M+ G +A ++Y L G + G
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 402 MEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYC 461
+ ALK + + + P + T +++ F ++ K+F E+
Sbjct: 288 LLSSALKLKNMMGKSGLQ-------PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVA 340
Query: 462 RYTFVYNTLIKAYAK 476
T YNTLI Y++
Sbjct: 341 PNTVTYNTLINGYSQ 355
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 16/293 (5%)
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VA 261
QMK P V + N M + ++ +RF+ M+ ++ PN + ++ +
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 262 RLNTAAETY--VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS 319
+L+ E +E + T +++TL G L + +L+ + P V T
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT-- 310
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
+ I F R L+ A +++ EM++ + +N+++ Y + G + A R Y++M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS-IVEI 438
NG + + +TY L G K + + K + K L V NS+ + + V
Sbjct: 371 CNGIQRDILTYNALIFGLCK---QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMI 489
A++G +L++ + +S +N L+ A+ + + +D ++LR M+
Sbjct: 428 NADRG-----FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMV 475
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 17/265 (6%)
Query: 153 LDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPH 212
LDKG+ E ++ M LG+ + + +N LI H L + + KL M + P+
Sbjct: 254 LDKGI-----ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL-KLKNMMGKSGLQPN 307
Query: 213 VSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVE 272
V T+N L+ L+ + F MK V PN ++Y L ++ + A + E
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 273 AVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL------PFVRTKSYMLAIEA 326
+ G L +++G L + + + ++EL P T S ++ +
Sbjct: 368 --DMVCNGIQRDILTYNALIFG-LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 327 FGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKAN 386
+ + +R E++ M + + + FN +++ +C++ D A+++ + M +
Sbjct: 425 VRK--NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 387 AITYRQLALGCLKSGMEEQALKTLE 411
+ T Q+ G G ++ K L+
Sbjct: 483 SRTVHQVCNGLKHQGKDQLVKKLLQ 507
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Query: 142 ELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHS-SPSLRKNMMPKL 200
++ YN L+ +KG++ +L+ M + G + + FN LI H +++ K+
Sbjct: 273 DVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI--HGFCRAMKLQEASKV 330
Query: 201 LTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV 260
+MKA V P+ TYN L+ + + + E RF+ M ++ + ++Y L +
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 261 ARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGN-RKELERVWSNIRELPFVRTKS 319
A +V+ ++K N ST L++ N + E S IR ++
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 320 YMLAIEAFGRIGHLERAEEIWLEM 343
+ + + AF R + A ++ EM
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREM 474
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 27/283 (9%)
Query: 211 PHVSTYNILMK--IEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARLNTAA 267
P ST+ IL+ A + ++ N+ R +LM +EP++++ I + R++ A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL--PF-VRTK--SYML 322
+ E EK + + T + LL +L K+L V+ + E+ F V+ S+ +
Sbjct: 180 DLMKELTEKHSPPDTY-TYNFLL---KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG 382
I+ +L A + ++ +A +N++M +C +A +YK MK G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 383 CKANAITYRQLALGCLKSGMEEQA---LKTL-ELGKRLPINKRVRNSTPWLETTLSIVEI 438
+ + ITY L G K+G E+A LKT+ + G P T S++
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE-----------PDTATYTSLMNG 344
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
KG+ L EE+ YNTL+ KA++ D
Sbjct: 345 MCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 149/359 (41%), Gaps = 24/359 (6%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
YN LV +G I + + M+ G+ +N ++ S + ++L +M
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL----SWMCNEGRASEVLREM 318
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLN 264
K + P +YNIL++ +N +LE + M + + P +Y L + +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
Query: 265 TAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKEL-----ERVWSNIRELPFVRTKS 319
AAE + + + + T ++L+ Y G+ K+ E + I+ F +
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF----T 434
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARLYKNM 378
Y I R A+E++ E KG+K + N++M +C G +D+A L K M
Sbjct: 435 YTSLIYVLCRKNKTREADELF-EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
+ +TY L G G E+A + + KR R P + +++
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR-------RGIKPDHISYNTLISG 546
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD--PKLLRRMILGGARP 495
+++KGD ++ + +E+ + YN L+K +K + + +LLR M G P
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y + + + G +++A + M + V FN ++ YC+ D A L++ MK
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALK----TLELGKRLPINKRVRNSTPWLETTLSI 435
GC+ N +++ L G L SG E+ +K +ELG R + E T I
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR------------FSEATCEI 303
Query: 436 -VEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIK 472
V+ +G V++ L +L + F Y +L++
Sbjct: 304 LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 313 PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAA 372
P SY I+ + G++E A++++ E+ +K V +N+M++ Y + G +A
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEAL 251
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
L+K+M + + T + C +SG ++ELG+++ + L+
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSG-------SIELGRQVHLWIDDHGFGSNLKIV 304
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKLL--RRMIL 490
++++++++ G++E LFE L + +NTLI Y +Y LL + M+
Sbjct: 305 NALIDLYSKCGELETACGLFERLPY----KDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 491 GGARP 495
G P
Sbjct: 361 SGETP 365
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 145/337 (43%), Gaps = 53/337 (15%)
Query: 143 LLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLT 202
+ +N++++A G ++E +K M + G + +N LI ++ M L+
Sbjct: 248 IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAM-DLMQ 306
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR 262
+M+ +T V T+ ++ + + F M L V PN ++ I++ A +
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT--IMSAVSACSC 364
Query: 263 L---NTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS 319
L N +E + AV+ DVL+ GN
Sbjct: 365 LKVINQGSEVHSIAVKMGFID------DVLV------GNS-------------------- 392
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
++ + + G LE A +++ +S K K V +NSM+T YC+ G KA L+ M+
Sbjct: 393 ---LVDMYSKCGKLEDARKVF---DSVKN-KDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRV-RNSTPWLETTLSIVEI 438
+ N IT+ + G +K+G E +A ++L +R+ + +V RN+ W I+
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEA---MDLFQRMEKDGKVQRNTATW----NLIIAG 498
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA 475
+ + G + +LF ++ S++ + +L+ A A
Sbjct: 499 YIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 53/371 (14%)
Query: 147 NLVIACLDK-GVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMK 205
+L++ C K + L + KR+ + G+ +S + N LI +SS S +++ ++
Sbjct: 168 DLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLI-HYSSKSKIDDLVWRIYECAI 226
Query: 206 ADKVTPHVSTYNILMKIEANEHNLENLMRFF----------------------------- 236
++ P+ T I++++ E L+ ++
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286
Query: 237 ---SLMK---LRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSMTGNNWSTLDVL 289
SL+K ++ + + I Y I+ YA A L +A + + E +++ + N++ V
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSF-VYTVF 345
Query: 290 LILYGYLGNRKELERVWSNIREL---PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESA 346
+ + G+ KE ER+ S + E P+ T + I F R G E+ E + E+
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDET--FNCLIGGFARFGWEEKGLE-YCEVMVT 402
Query: 347 KGL-KSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQ 405
+GL S FN M+ K +++A + G + TY L G ++ +Q
Sbjct: 403 RGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQ 462
Query: 406 ALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTF 465
ALK L R +P E S++ G VE EK + + K
Sbjct: 463 ALK-------LFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNAD 515
Query: 466 VYNTLIKAYAK 476
+Y+ LIKA+ K
Sbjct: 516 IYDALIKAFQK 526
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 9/179 (5%)
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y I R G ++ A++++ EM +V + S++ C +D+A R + M
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
K+ G + N TY L G K G QA++ E+ R P + T +++
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM-------MMARGCRPNMVTYTTLITG 306
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIY--DPKLLRRMILGGARP 495
++ ++ +L + ++ +Y +I + + L MILGG P
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y I + G L AE EM+S K +V F++++ Y K G + K +YK M
Sbjct: 85 TYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMM 144
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
N TY L G ++A+K L+ L I+K TP + T ++
Sbjct: 145 IQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD----LMISK---GCTPNVVTYSTLANG 197
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKL 484
F + V++ KL +++ + T NTLIK Y +A D L
Sbjct: 198 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 18/255 (7%)
Query: 161 SLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILM 220
+LE +KRM++ G + + ++ LI S R + L +M + K+ P+V T++ L+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLIT-GLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 221 KIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-ARLNTAAETYVEAVEKSMT 279
A L + + +M ++PN +Y L Y + R++ A + + K T
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 280 GNNWSTLDVLLILYGYLGNR-KELERVWSNIR---ELP----FVRTKSYMLAIEAFGRIG 331
N ++ Y L N + RV I+ ++P T S I+ + + G
Sbjct: 186 PN--------VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 332 HLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYR 391
++ A ++ M S + ++ +N ++ +G ++KA +++M+ + ITY
Sbjct: 238 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 297
Query: 392 QLALGCLKSGMEEQA 406
+ G K+ M ++A
Sbjct: 298 IMIHGMCKACMVKEA 312
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 276 KSMTGN---NWSTLDVLLILYGYLGNRKELERVWSNIRE----LPFVRTKSYMLAIEAFG 328
K M G N +T + +++ + G + +ER+W + E P V SY + +EA+
Sbjct: 235 KKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNV--YSYNVLMEAYC 292
Query: 329 RIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAI 388
G + AE++W EM+ + + +N+M+ C + + KA L+++M G + +
Sbjct: 293 ARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCL 352
Query: 389 TYRQLALGCLKSGMEEQAL 407
TY L G K+G + L
Sbjct: 353 TYEHLVNGYCKAGDVDSGL 371
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 128/309 (41%), Gaps = 25/309 (8%)
Query: 193 RKNMMPKLL---TQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEI 249
+K+M K L +M P V NI++K+ + + + M + P I
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 250 SY-CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSN 308
++ +L L + ++E +++ + T ++L+ + G +E R +
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE-VTYNILINGFSKNGKMEEARRFHGD 298
Query: 309 IRELPFVRTK-SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGV 367
+R F T S+ IE + + G + A + EM +A + +N + C G
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 368 IDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTP 427
ID A L +M A + ++Y L G +K G +A + + R + P
Sbjct: 359 IDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFD-------DLRAGDIHP 407
Query: 428 WLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK-------AKIY 480
+ T ++++ E G++E ++L EE+ Y TL+K + K ++Y
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 481 DPKLLRRMI 489
D ++LR+ I
Sbjct: 468 D-EMLRKGI 475
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 176/421 (41%), Gaps = 25/421 (5%)
Query: 65 MRDGF--PVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKL 122
+R GF VR+ ++ + LR +M +A V E +I E P + ++ +++ K
Sbjct: 195 IRKGFLPSVRNCNI--VLKVLRDSRMMNKASAVYETMI-EHGIMPTVITFNTMLDSCFKA 251
Query: 123 HGISHGEKLF---TRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLV 179
+ +K++ R EF +E+ YN L+ G + + + MR G+ ++
Sbjct: 252 GDLERVDKIWLEMKRRNIEF-SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 180 FNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLM 239
FN LI + L + + +M + P STYNI + + +++ S M
Sbjct: 311 FNPLIEGYCKQGLFDDAW-GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 240 KLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNR 299
P+ +SY L + + A + + + T + L+ GN
Sbjct: 370 ----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 300 KELERVWSNIR-ELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNS 357
+ +R+ + +L F +Y ++ F + G+L A E++ EM KG+K + +
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPDGYAYTT 484
Query: 358 MMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLAL-GCLKSGMEEQALKTLELGKRL 416
+ G DKA RL++ M A A +T + + G K G +K +E +++
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG---NLVKAIEFQRKI 541
Query: 417 PINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
RV P T +++ + E G + L++E+ + + Y LI +AK
Sbjct: 542 ---FRV-GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 477 A 477
A
Sbjct: 598 A 598
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
I+ + + G ++ A+ ++ EME+ V +N++++ Y HG+ +A R+ MK C
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETI----DVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNST--PWLETTLSIVEIFAE 441
K N +T+ + GC +G+ +Q + E +R+ P LE +V +
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFE--------SMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 442 KGDVENVEKLFEEL 455
G ++ KL E +
Sbjct: 599 SGQLDKAMKLIEGI 612
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 140/389 (35%), Gaps = 82/389 (21%)
Query: 92 ALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEFQNELLYNNLVIA 151
AL V +W ++ ++ +Y+ L+E K+ KL + + + + L + A
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF----KLIWSLVDDMKAKKLLSKETFA 166
Query: 152 CLDKGVIRL-----SLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKA 206
+ + R ++ +M E G+ + FNR++ S S K+ +MK
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK-SRNVGDAQKVFDKMKK 225
Query: 207 DKVTPHVSTYNILMKIEANEHNL-----------------------------------EN 231
+ P + +Y IL++ E NL E
Sbjct: 226 KRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEE 285
Query: 232 LMRFFSLMKLRQVEPNEISYCILAYA-HAVARLNTAAETY-------------------- 270
+RFF+ M+ R +P+ +C L + +LN A E +
Sbjct: 286 AIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVG 345
Query: 271 --------------VEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVR 316
V+ + G N T D++L + KE V+ + P V
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVS 405
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYK 376
T Y + + F L+ A +IW EM+ L + F+S++T C +D+A +
Sbjct: 406 T--YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 377 NMKANGCKANAITYRQLALGCLKSGMEEQ 405
M G + + +L L G +++
Sbjct: 464 EMLDVGIRPPGHMFSRLKQTLLDEGRKDK 492
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 162/388 (41%), Gaps = 42/388 (10%)
Query: 81 NRLRKLKMNKRALEVMEWVIRER---PYRPRELDYSYLVEFTTKLHGISHGEKLFTR-VP 136
N + + N EV V RE P P + ++++++ G G ++ +
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 137 SEFQNELLYNNLVIACLDK-GVIRLSLEYMKRMRELGYPISHLV-FNRLIILHSSPSLRK 194
S ++ N ++ + G ++ + + RM P+ V +N L+ S L K
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM-----PVRDAVSWNSLL----SAYLEK 219
Query: 195 NMMPK---LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
++ + L +M+ +V ++N ++ A ++ F M +R V +S+
Sbjct: 220 GLVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV----VSW 271
Query: 252 --CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI 309
+ AYAH V N E + + ++ S + TL +L LG+ + E V I
Sbjct: 272 NAMVTAYAH-VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI 330
Query: 310 RELPFVRTKSYMLA--IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGV 367
+ + + ++ ++ + + G +++A LE+ A + V +NS+++ HG+
Sbjct: 331 DKHG-IEIEGFLATALVDMYSKCGKIDKA----LEVFRATSKRDVSTWNSIISDLSVHGL 385
Query: 368 IDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTP 427
A ++ M G K N IT+ + C GM +QA K E+ V P
Sbjct: 386 GKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEM------MSSVYRVEP 439
Query: 428 WLETTLSIVEIFAEKGDVENVEKLFEEL 455
+E +V++ G +E E+L E+
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVNEI 467
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 113/286 (39%), Gaps = 14/286 (4%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
LL M P V TYN +++ + N E +RF+ P I+Y +L
Sbjct: 196 LLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLV--EL 253
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF----V 315
V R +A +E +E + + L Y R LE V S I+ + +
Sbjct: 254 VCRYCGSARA-IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL 312
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLY 375
T +Y + + + + EEI M +V +N ++ CK ++ +A +
Sbjct: 313 NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFF 372
Query: 376 KNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSI 435
M C + +TY + K GM + A++ L L K P L T S+
Sbjct: 373 YQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN-------TCCPPGLITYNSV 425
Query: 436 VEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
++ A+KG ++ +L+ ++ + +LI + +A + +
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVE 471
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 104/269 (38%), Gaps = 41/269 (15%)
Query: 143 LLYNNLVIACLDKGVIRLSLEYMKRMRELGYP---ISHLVFNRLIILHSSPSLRKNMMPK 199
+ YN ++ D G ++ + K + G P I++ V L+ + + +
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA----RAIE 265
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
+L M + P + TYN L+ NLE + + +E N ++Y L ++
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS-- 323
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKS 319
+ Y + VE ++L I+Y P V T
Sbjct: 324 -----LCSHEYWDEVE-----------EILNIMY--------------QTSYCPTVIT-- 351
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
Y + I + L RA + + +M K L + +N+++ K G++D A L +K
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALK 408
C ITY + G K G+ ++AL+
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALE 440
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 288 VLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIGHLERAEEIWLEMESA 346
VL+ +G LG K V++ I L T+ Y I+A + L+ A + +M S
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 347 KGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA 406
+N ++ CK GV+D+A RL K M+ G + N TY L G L +G ++A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 407 LKTLEL 412
LK LE+
Sbjct: 270 LKQLEM 275
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 123/277 (44%), Gaps = 19/277 (6%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYA-HAVARLNTAA 267
+ P V ++NIL+ ++ + S M VEP+ ++Y ILA H + ++ A
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKE----LERVWSNIRELPFVRTKSYMLA 323
E + ++K ++ + T +LL LGN L+ + S EL + S ML+
Sbjct: 313 EVIRDMLDKGLS-PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
+ G ++ A ++ +M++ + ++ ++ CK G D A LY M
Sbjct: 372 --GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS--IVEIFAE 441
N+ T+ L LG + GM +A L+ + +S L+ L +++ +A+
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLD---------SLISSGETLDIVLYNIVIDGYAK 480
Query: 442 KGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK 478
G +E +LF+ + ++ +N+LI Y K +
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 45/308 (14%)
Query: 206 ADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVAR-LN 264
A+ P V+TYNIL+ E E + F + + PN +SY L A+ ++ +
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 265 TAAETYVEAVEKSMTGN--NWSTLDVLLILYGYLGNR-----KELERVWS------NIRE 311
A++ ++ E+ + + L L++ G++ + K ++R S N+
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 312 LPFVRTKSYMLA----------------------IEAFGRIGHLERAEEIWLEMESAKGL 349
+T ++ A I+ F R G + A +++ + KG+
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEKGV 516
Query: 350 K-SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
K V N+M+ +C+ G++D+A M + TY + G +K A+K
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 409 TLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYN 468
++ NK P + T S++ F +GD + E+ F+E+ Y
Sbjct: 577 IFRYMEK---NK----CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629
Query: 469 TLIKAYAK 476
TLI++ AK
Sbjct: 630 TLIRSLAK 637
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 142/340 (41%), Gaps = 22/340 (6%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQM 204
YN L+ +G +++ ++ + G ++L + LI + S ++ KLL QM
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK-SKEYDIASKLLLQM 406
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA-VARL 263
P + TY IL+ ++++ + + R V P+ Y +L R
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 264 NTAAETYVEAVEKSMTGNNWSTLDVLLILYGYL--GNRKELERVWS-NIRELPFVRTKSY 320
A + E +++++ + + ++ G++ G+ E +V+S ++ + V +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYV---YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 321 MLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKA 380
I+ F R G L+ A M + +++++ Y K + A ++++ M+
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 381 NGCKANAITYRQLALGCLKSG---MEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVE 437
N CK N +TY L G G M E+ K ++L R+ P + T +++
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL----------RDLVPNVVTYTTLIR 633
Query: 438 IFA-EKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
A E +E +E + +K +N L++ + K
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 123/277 (44%), Gaps = 19/277 (6%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYA-HAVARLNTAA 267
+ P V ++NIL+ ++ + S M VEP+ ++Y ILA H + ++ A
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKE----LERVWSNIRELPFVRTKSYMLA 323
E + ++K ++ + T +LL LGN L+ + S EL + S ML+
Sbjct: 313 EVIRDMLDKGLS-PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
+ G ++ A ++ +M++ + ++ ++ CK G D A LY M
Sbjct: 372 --GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS--IVEIFAE 441
N+ T+ L LG + GM +A L+ + +S L+ L +++ +A+
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLD---------SLISSGETLDIVLYNIVIDGYAK 480
Query: 442 KGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAK 478
G +E +LF+ + ++ +N+LI Y K +
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQ 517
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 115/270 (42%), Gaps = 11/270 (4%)
Query: 209 VTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYC-ILAYAHAVARLNTAA 267
+TP++ T N+L+K ++++E+ + + + PN ++Y IL A + +A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK-SYMLAIEA 326
E +++ + +T VL+ Y LG E V ++ + + +Y + I A
Sbjct: 247 RVLEEMLDRGWYPDA-TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 327 FGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKAN 386
+ A ++ EM + ++ C+ +D+A L++ M N C +
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 387 AITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVE 446
L K G +A K + + + S P L T +++ EKG++
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFD--------EFEKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 447 NVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+L++++++ K F YN LI+ +K
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 18/224 (8%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
+L Q+K+ +TP+ T+NI + + +E + MK P ISY + +
Sbjct: 212 VLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELE---RVWSNIRELPFVR 316
+ +E + + N T ++ L +KE E RV + ++ +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIM---SSLNAQKEFEEALRVATRMKR-SGCK 326
Query: 317 TKS--YMLAIEAFGRIGHLERAEEIW-LEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
S Y I R G LE AE ++ +EM + +NSM+ +YC H DKA
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 374 LYKNMK-ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRL 416
L K M+ +N C + TY+ L C K G +E+GK L
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRG------DVVEVGKLL 424
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 18/224 (8%)
Query: 200 LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHA 259
+L Q+K+ +TP+ T+NI + + +E + MK P ISY + +
Sbjct: 212 VLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 260 VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELE---RVWSNIRELPFVR 316
+ +E + + N T ++ L +KE E RV + ++ +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIM---SSLNAQKEFEEALRVATRMKR-SGCK 326
Query: 317 TKS--YMLAIEAFGRIGHLERAEEIW-LEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
S Y I R G LE AE ++ +EM + +NSM+ +YC H DKA
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 374 LYKNMK-ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRL 416
L K M+ +N C + TY+ L C K G +E+GK L
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRG------DVVEVGKLL 424
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 219 LMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSM 278
L++ + ++E + F M +R + + C ++ V N A Y + +
Sbjct: 148 LVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH---VGLHNQALSMYKRMGNEGV 204
Query: 279 TGNNWSTLDVLLILYGY---LGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLER 335
G+++ TL LL + L L R+ +IR V + + I+ + + G LE
Sbjct: 205 CGDSY-TLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNAL--IDMYAKCGSLEN 261
Query: 336 AEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLAL 395
A ++ M + V +NSM+ Y HG +A ++ M A+G + NAIT+ L L
Sbjct: 262 AIGVFNGMRK----RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLL 317
Query: 396 GCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVEN 447
GC G+ ++ ++ E I + TP ++ +V+++ G +EN
Sbjct: 318 GCSHQGLVKEGVEHFE------IMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 147/352 (41%), Gaps = 67/352 (19%)
Query: 169 RELGYPISHLVFNRLIILHSSP-----------SLRKNMMPKLLTQMKADKVT-PHVSTY 216
+ L +P + + +LI+ +S P + P T++ D VT P+V
Sbjct: 15 QALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVV 74
Query: 217 NILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCI---------LAYAHAVARLNTAA 267
N + K + +++R + + P+ S+ + + + V +L
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFK 134
Query: 268 ETYV-----------EAVEKSMT---------GNNWSTLDVLLILYGYLGNRKELERVWS 307
+ YV E+VE + G++W +V++ Y GN++E +++
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW---NVMISGYWKWGNKEEACKLFD 191
Query: 308 NIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGV 367
+ E V S+ + I F ++ LE A + + M KSV +N+M++ Y ++G
Sbjct: 192 MMPENDVV---SWTVMITGFAKVKDLENARKYFDRMPE----KSVVSWNAMLSGYAQNGF 244
Query: 368 IDKAARLYKNMKANGCKANAITYRQLALGC---LKSGMEEQALKTLELGKRLPINKRVRN 424
+ A RL+ +M G + N T+ + C + +K ++ KR+ +N V+
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLID-EKRVRLNCFVKT 303
Query: 425 STPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+++++ A+ D+++ ++F EL R +N +I Y +
Sbjct: 304 ---------ALLDMHAKCRDIQSARRIFNELGTQ---RNLVTWNAMISGYTR 343
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 34/259 (13%)
Query: 205 KADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLN 264
K D+V YN+L+K+ ++ + F M R V + + ++ L+
Sbjct: 268 KVDQVV-----YNVLLKLYMESGLFDDARKVFDGMSERNV---------VTWNSLISVLS 313
Query: 265 TAAETY-----VEAVEKSMTGNNWSTLDVLLIL---YGYLGNRKELERVWSNIRELPFVR 316
+ +++ M G +W+TL +L L KE+ +E P V
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 317 TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYK 376
+ ++ + +G+ G +E + ++ M + K + +N M+ Y +G I++ L++
Sbjct: 374 LLNSLM--DMYGKCGEVEYSRRVFDVMLT----KDLASWNIMLNCYAINGNIEEVINLFE 427
Query: 377 NMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIV 436
M +G + IT+ L GC +G+ E L E R+ RV +P LE +V
Sbjct: 428 WMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE---RMKTEFRV---SPALEHYACLV 481
Query: 437 EIFAEKGDVENVEKLFEEL 455
+I G ++ K+ E +
Sbjct: 482 DILGRAGKIKEAVKVIETM 500
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 177/459 (38%), Gaps = 44/459 (9%)
Query: 61 LRSWMRDGFPVRSNDVFH-AINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFT 119
+R M+ FP S + + ++N L K + +RA ++ IR P + Y+ L++
Sbjct: 2 VRGLMK--FPGISTKLLNISVNSLCKFRNLERAETLLIDGIR-LGVLPDVITYNTLIKGY 58
Query: 120 TKLHGISHGEKLFTRVPSEF--QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISH 177
T+ GI + R+ + YN+L+ ++ L+ M G
Sbjct: 59 TRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDM 118
Query: 178 LVFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFS 237
+N L+ + L + + P + TYNIL+ + +N + F
Sbjct: 119 WSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK 178
Query: 238 LMKLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLG 297
+K R V+P ++Y IL +R + + + ++KS N T +L +Y
Sbjct: 179 HLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMY---- 233
Query: 298 NRKELERVWSNIRELPFVRTKSYML-------AIEAFGRIGHLERAEEIWLEM-ESAKGL 349
+ +R+ ++ ++ + Y + A + G E A E E+ S
Sbjct: 234 --FKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS 291
Query: 350 KSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKT 409
+ + +N+++ +Y K G +D L + ++ G K + T+ + G L G A K
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKH 351
Query: 410 LELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNT 469
L + + P + T +++ + G V+ +LF + YT V +
Sbjct: 352 LACIGEMGMQ-------PSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHN 404
Query: 470 LIK-------------AYAKA-KIYDPKLLRRMILGGAR 494
L K Y K KI P RR +L G R
Sbjct: 405 LCKDGRLVCASKLLLSCYNKGMKI--PSSARRAVLSGIR 441
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 108/246 (43%), Gaps = 17/246 (6%)
Query: 250 SYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI 309
++CI+ +A A+ A +EK N + LL N ++ + V+ N+
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 310 RELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVID 369
R+ +K+Y + +E +G+ +L +A E++ EM A + ++ M+ + CK G +D
Sbjct: 230 RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 370 KAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWL 429
+A + ++M + CK Y L E+A+ T +R + V
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADV------- 342
Query: 430 ETTLSIVEIFAEKGDVENVEKLFEELHK------SKYCRYTFVYNTLIKAYAKAKIYDPK 483
S++ F + ++NV ++ +E+ SK C + LI+ K + +D
Sbjct: 343 AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC--NIILRHLIERGEKDEAFD-- 398
Query: 484 LLRRMI 489
+ R+MI
Sbjct: 399 VFRKMI 404
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 9/161 (5%)
Query: 313 PFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAA 372
P RT + + I F + + A + M+ + V + S + YCK G +
Sbjct: 271 PDART--FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 373 RLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETT 432
+ + M+ NGC N +TY + KS +AL E K P +
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKE-------DGCVPDAKFY 381
Query: 433 LSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKA 473
S++ I ++ G ++ ++FE++ R VYNT+I A
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 16/262 (6%)
Query: 143 LLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLT 202
+ Y ++ + G + +Y + + G P S L + ++I S + +
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS-LTTSTILIGACSRFGSISDAESVFR 467
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-A 261
MK + + V TYN LM H L + M+ + P+ +Y IL ++ V
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELER---VW---SNIRELPFV 315
++ A E E + + + + DV+ G R + + +W +++R P V
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVI----GGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARL 374
T S +L + + +E+A ++ ++ A GLK V +N+++ YC G I+KA L
Sbjct: 584 VTCSALL--HGYCKAQRMEKAIVLFNKLLDA-GLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 375 YKNMKANGCKANAITYRQLALG 396
M G N T+ L LG
Sbjct: 641 IGLMVQRGMLPNESTHHALVLG 662
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 16/262 (6%)
Query: 143 LLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLT 202
+ Y ++ + G + +Y + + G P S L + ++I S + +
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS-LTTSTILIGACSRFGSISDAESVFR 467
Query: 203 QMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-A 261
MK + + V TYN LM H L + M+ + P+ +Y IL ++ V
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELER---VW---SNIRELPFV 315
++ A E E + + + + DV+ G R + + +W +++R P V
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVI----GGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 316 RTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK-SVEQFNSMMTVYCKHGVIDKAARL 374
T S +L + + +E+A ++ ++ A GLK V +N+++ YC G I+KA L
Sbjct: 584 VTCSALL--HGYCKAQRMEKAIVLFNKLLDA-GLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 375 YKNMKANGCKANAITYRQLALG 396
M G N T+ L LG
Sbjct: 641 IGLMVQRGMLPNESTHHALVLG 662
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 111/296 (37%), Gaps = 83/296 (28%)
Query: 202 TQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVA 261
+ +KAD V + + L K + N N +NL F+ M + + PN ++Y
Sbjct: 4 SHIKADVVIS-TAIVDRLCK-DGNHINAQNL---FTEMHEKGIFPNVLTY---------- 48
Query: 262 RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYM 321
N +++ + WS D LL R +E+ + P + T S +
Sbjct: 49 --NCMIDSFCHS-------GRWSDADQLL--------RHMIEKQIN-----PDIVTFSAL 86
Query: 322 LAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKAN 381
I AF + + AEEI+ EM + +NSM+ +CK +D A R+ +M +
Sbjct: 87 --INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK 144
Query: 382 GCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAE 441
GC + +T+ L G K+ KRV N +EIF
Sbjct: 145 GCSPDVVTFSTLINGYCKA-------------------KRVDNG----------MEIFC- 174
Query: 442 KGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
E+H+ T Y TLI + + D LL MI G P
Sbjct: 175 ------------EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 24/343 (6%)
Query: 143 LLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLT 202
+ YNNL+ + + Y+ +M G +N LI + K M +L
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC-----KGGMVQLAE 341
Query: 203 QMKADKV----TPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
++ D V P TY L+ +E + F+ + ++PN I Y L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 259 A-VARLNTAAETYVEAVEKSMTGNNWSTLDVL---LILYGYLGNRKELERVWSNIRELPF 314
+ + AA+ E EK + T ++L L G + + L +V + P
Sbjct: 402 SNQGMILEAAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 315 VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARL 374
+ T + + I + +E A EI M V +NS++ CK +
Sbjct: 461 IFT--FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 375 YKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS 434
YK M GC N T+ L + ++AL LE K +N P T +
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN-------PDAVTFGT 571
Query: 435 IVEIFAEKGDVENVEKLFEELHKS-KYCRYTFVYNTLIKAYAK 476
+++ F + GD++ LF ++ ++ K T YN +I A+ +
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 141 NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI-------ILHSSPSLR 193
N +LYN L+ ++G+I + + M E G FN L+ + + L
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 194 KNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-C 252
K M+ K P + T+NIL+ + + +EN + +M V+P+ +Y
Sbjct: 450 KVMISK--------GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 253 ILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
+L ++ ETY VEK N + T ++LL L ++L+ + E+
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLF-TFNILL---ESLCRYRKLDEALGLLEEM 557
Query: 313 PFVRTKS-------YMLAIEAFGRIGHLERAEEIWLEMESA-KGLKSVEQFNSMMTVYCK 364
+ KS + I+ F + G L+ A ++ +ME A K S +N ++ + +
Sbjct: 558 ---KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 365 HGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSG 401
+ A +L++ M + TYR + G K+G
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 331 GHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITY 390
G+ ++A ++++ M V F M +CK A RL NM + GC+ N + Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 391 RQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEK 450
+ G + + + + GK L + L T ++ + +KGDV+ EK
Sbjct: 185 CTVVGGFYEENFKAEGYEL--FGKML-----ASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 451 LFEELHKSKYCRYTFVYNTLIKAYAKAKIYDP--KLLRRMILGGARP 495
L +++ K F YN I+ + D +++ +I G +P
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKP 284
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 159/395 (40%), Gaps = 23/395 (5%)
Query: 92 ALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF--QNELLYNNLV 149
A+ ++ +I + P +P + Y+ L+ K E ++ +E + YN L+
Sbjct: 270 AVRMVGCLIEQGP-KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 150 IACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI--ILHSSPSLRKNMMPKLLTQMKAD 207
G+++L+ + G+ + LI + H + N L +
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET---NRALALFNEALGK 385
Query: 208 KVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAA 267
+ P+V YN L+K +N+ + + + M + + P ++ IL + A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 268 ETYVEAVEKSMTGNNWSTLDVLLILYGY-----LGNRKELERVWSNIRELPFVRTKSYML 322
+ V+ + + T ++L+ +GY + N E+ V + P V T + +L
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILI--HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 323 AIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG 382
+ E E + M ++ FN ++ C++ +D+A L + MK
Sbjct: 504 --NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 383 CKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEK 442
+A+T+ L G K+G + A L +++ +V +STP T I+ F EK
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYT---LFRKMEEAYKVSSSTP---TYNIIIHAFTEK 615
Query: 443 GDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
+V EKLF+E+ + Y ++ + K
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 13/279 (4%)
Query: 139 FQNELLYNNLVIACLDKGVIRLS-LEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMM 197
+N+L Y+ V L I+ L Y + + ++ + + +N L+ S L K+
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA- 310
Query: 198 PKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY-CILAY 256
L+ +M+ + + P T+N L A E + MK + V PN +S+ I +
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 257 AHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLG---NRKELERVWSNIRELP 313
A + +++ E+ + G N +T+ LL + G L + KE+ +R+
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGV-GPNAATMSTLLKILGCLSLLHSGKEVHGF--CLRKNL 427
Query: 314 FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
++ +G+ G L+ A EI+ +++ KS+ +N M+ Y G ++
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKN----KSLASWNCMLMGYAMFGRGEEGIA 483
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLEL 412
+ M G + +AIT+ + C SG+ ++ K +L
Sbjct: 484 AFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDL 522
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 120/311 (38%), Gaps = 28/311 (9%)
Query: 199 KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
K+ +M V ++ YN+L+ + + E + S M+ + V P+ +Y L +
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK 318
++ A + + +E+S N T + + + G +E R++ I++
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV 308
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
+Y I+ + R+ ++ A + MES V +NS++ C+ G I +A RL M
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 379 KANGCKANAITYRQLALG-C----------LKSGMEEQALK-----------------TL 410
+ + IT L C +K M E LK L
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 411 ELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTL 470
E K + + +P T +V+ F + + + KL EE K C +Y L
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 471 IKAYAKAKIYD 481
I+ K + D
Sbjct: 489 IRRICKLEQVD 499
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Query: 314 FVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAAR 373
F+ Y +A +A ++G +E A E+ EM+ + V + +++ YC G + A
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 374 LYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTL 433
L M NG + ITY L G ++G EE+ L+ E + P T
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE-------RMKAEGPKPNAVTNS 497
Query: 434 SIVEIFAEKGDVENVEKLFEELHK 457
I+E V+ E F L +
Sbjct: 498 VIIEGLCFARKVKEAEDFFSSLEQ 521
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 147/382 (38%), Gaps = 44/382 (11%)
Query: 139 FQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMP 198
F + + YN A G + + E ++ M++ G + + LI L+ ++
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI---DGYCLQGKVVD 441
Query: 199 --KLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAY 256
L+ +M + ++P + TYN+L+ A + E ++ + MK +PN ++ ++
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIE 501
Query: 257 AHAVARLNTAAETYVEAVEKSMTGNNWS-------------------------------T 285
AR AE + ++E+ N S
Sbjct: 502 GLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK 561
Query: 286 LDVLLILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMES 345
L L + GYL ++ + S R P M I AF ++ ++ A+ ++ M
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM--IGAFCKLNNVREAQVLFDTMVE 619
Query: 346 AKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQ 405
+ + + M+ YC+ + KA L+++MK G K + +TY L LK E
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHH 679
Query: 406 ALKTL--ELGKRLPINKRVRNSTPWLETTLSIVEIFAEK----GDVENVEKLFEELHKSK 459
++ E+GKR S + + + ++ ++E +LF+ + S
Sbjct: 680 ETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
Query: 460 YCRYTFVYNTLIKAYAKAKIYD 481
Y TLI +Y + D
Sbjct: 740 LEPDMVAYTTLISSYFRKGYID 761
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 120/298 (40%), Gaps = 8/298 (2%)
Query: 181 NRLIILHS-SPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLM 239
N L++L++ S + + +L M+A +P++ YN L+ +E F +
Sbjct: 316 NWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRL 375
Query: 240 KLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNR 299
+EP+E SY + A A+ Y + +++ N L L+ L G+R
Sbjct: 376 CNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDR 435
Query: 300 KELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMM 359
+ ++ + + + ++A+ ++G ++ + + F+S++
Sbjct: 436 DGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLV 495
Query: 360 TVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPIN 419
Y KHG++D L + K + Y L C +SG A+K +
Sbjct: 496 MAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYN-------H 548
Query: 420 KRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
K + L T ++++I+ G+ EKL+ L S ++ +++ Y KA
Sbjct: 549 KMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKA 606
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 16/183 (8%)
Query: 80 INRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGI---SHGEKLFTRVP 136
I L KL M K+A VM + R + P V F + +HG SH K +
Sbjct: 685 IATLCKLGMTKKAAMVM-GDMEARGFIPDT------VTFNSLMHGYFVGSHVRKALSTYS 737
Query: 137 SEFQ-----NELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPS 191
+ N YN ++ D G+I+ +++ M+ G +N LI +
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 192 LRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
K M + +M AD + P STYN+L+ AN + M R V PN +Y
Sbjct: 798 NMKGSM-TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Query: 252 CIL 254
C +
Sbjct: 857 CTM 859
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 239 MKLRQVEPNEISYCILA--------YAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLL 290
M+ V PN ++Y L Y HA+A Y + V + + V L
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALA-------LYSQMVVRG--------IPVDL 329
Query: 291 ILYGYL-------GNRKELERVWSNIRE---LPFVRTKSYMLAIEAFGRIGHLERAEEIW 340
++Y L G+ +E E+ + + E +P V T Y ++ + G L AE I
Sbjct: 330 VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT--YTALVDGLCKAGDLSSAEFII 387
Query: 341 LEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKS 400
+M + +V ++SM+ Y K G++++A L + M+ N TY + G K+
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447
Query: 401 GMEEQALKTLELGKRL 416
G EE A +EL K +
Sbjct: 448 GKEEMA---IELSKEM 460
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 154/384 (40%), Gaps = 44/384 (11%)
Query: 80 INRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFTRVPSEF 139
IN L K+ + + +VIR + + L+ K +S EKLF R+ SE
Sbjct: 338 INELGKMMLVPQGKAFHGFVIR-HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI-SEE 395
Query: 140 QNELLYNNLVIACLDKGVIRL-----SLEYMKRMRELGYPISHLVFNRLI--ILHSSPSL 192
N+ +N ++ KG ++ +E ++++ LG I +I H L
Sbjct: 396 GNKEAWNTML-----KGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVL 450
Query: 193 RKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY- 251
+ + + D +S N L+ + +L R F + + N I++
Sbjct: 451 LGKSLHCYVVKTSLDLT---ISVVNSLIDLYGKMGDLTVAWRMFC-----EADTNVITWN 502
Query: 252 -CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELER---VWS 307
I +Y H +E + ++ ++ N + L+ L N LER +
Sbjct: 503 AMIASYVHC-----EQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 308 NIRELPFVRTKSYMLA-IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHG 366
I E S A I+ + + GHLE++ E++ A K +N M++ Y HG
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELF----DAGNQKDAVCWNVMISGYGMHG 613
Query: 367 VIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNST 426
++ A L+ M+ + K T+ L C +G+ EQ GK+L + +
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ-------GKKLFLKMHQYDVK 666
Query: 427 PWLETTLSIVEIFAEKGDVENVEK 450
P L+ +V++ + G++E E
Sbjct: 667 PNLKHYSCLVDLLSRSGNLEEAES 690
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMK 379
+++ IE++G+ G ++ + +I+ +M+ ++++ +NS+ V + G A R + M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 380 ANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIF 439
+ G + TY + G S E AL+ E + + R +P T +++ F
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFE-------DMKTRGISPDDATFNTMINGF 300
Query: 440 AEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYDPKL 484
++ EKLF E+ +K Y T+IK Y D L
Sbjct: 301 CRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGL 345
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
+ + + G +E A EI+ +M K +NSM+ HG+ DKA L+K M +G
Sbjct: 510 VSMYAKCGAIEDAYEIFAKMVQ----KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKG 443
K N++T+ + C SG+ + LEL K + K + P ++ +S++++ G
Sbjct: 566 KPNSVTFLGVLSACSHSGL---ITRGLELFKAM---KETYSIQPGIDHYISMIDLLGRAG 619
Query: 444 DVENVEKLFEEL 455
++ E+ L
Sbjct: 620 KLKEAEEFISAL 631
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 16/262 (6%)
Query: 145 YNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLI-ILHSSPSLRKNMMPKLLTQ 203
Y LV +G + +++ +++M + GYP + + +N L+ L SL +++ + + +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSL--QFVER 201
Query: 204 MKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAV-AR 262
+ + P+ TY+ L++ E + ++ + ++ EPN +SY +L R
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 263 LNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR---ELPFVRTKS 319
+ A + E K N S ++LL G +E + + + P V T
Sbjct: 262 TDDAMALFRELPAKGFKANVVS-YNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT-- 318
Query: 320 YMLAIEAFGRIGHLERAEEIWLEMESAKGLK----SVEQFNSMMTVYCKHGVIDKAARLY 375
Y + I + G E+A ++ EM +KG + +N ++ CK G +D +
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEM--SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
Query: 376 KNMKANGCKANAITYRQLALGC 397
M CK N TY + C
Sbjct: 377 DEMIYRRCKPNEGTYNAIGSLC 398
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 13/269 (4%)
Query: 215 TYNILMKIEANEHNLENLMRFFSLMKLRQVEPNE--ISYCILAYAHAVARLNTAAETYVE 272
T L+ + +H L+ R + L P + I I AY L A ++E
Sbjct: 672 TIATLIAVYGRQHKLKEAKRLY-LAAGESKTPGKSVIRSMIDAYVRC-GWLEDAYGLFME 729
Query: 273 AVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPF-VRTKSYMLAIEAFGRIG 331
+ EK T+ +L+ G +E E + E + T Y I+A G
Sbjct: 730 SAEKG-CDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAG 788
Query: 332 HLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYR 391
L+ A EI+ M ++ S++ +N+M++VY + +DKA ++ N + +G + Y
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 392 QLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKL 451
+ + K G +AL ++ K ++ TP +V+I A V++L
Sbjct: 849 NMIMHYGKGGKMSEALSLFSEMQK----KGIKPGTPSYNM---MVKICATSRLHHEVDEL 901
Query: 452 FEELHKSKYCRYTFVYNTLIKAYAKAKIY 480
+ + ++ C Y TLI+ YA++ +
Sbjct: 902 LQAMERNGRCTDLSTYLTLIQVYAESSQF 930
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 305 VWSNIRELPFVR-TKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYC 363
V+ + +E V + ++M+ ++ + G +E EI M V + +M+
Sbjct: 250 VYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLV 309
Query: 364 KHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKT-LEL-GKRLPINKR 421
G +D + R++ M+ + K + + Y L +G K G E+ + +E+ GK++ I++
Sbjct: 310 SEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDR- 368
Query: 422 VRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
E ++E F G V + L+E+L S Y +YN +IK D
Sbjct: 369 --------EIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD 420
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 246 PNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERV 305
P+ ISY L A V + + + V VE+S T + + ++ + GN ++ +
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 306 WSNIRELPFVRTKS-YMLAIEAFGRIGHLERAEEI---WLEMESAKGLKSVEQFNSMMTV 361
++EL T S Y I+ +G G ER+ E+ LE + ++ FN ++
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 362 YCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKR 421
+CK +++A + K M+ G + + +TY +A ++ G E E+ +++ + ++
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG--ETVRAESEVVEKMVMKEK 255
Query: 422 VRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
+ P T +V + +G V + + + + + V+N+LI + + D
Sbjct: 256 AK---PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 296 LGNRKELERVWSNIRELPF----VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK- 350
L + K+ E +W ++++ + ++ IE +G+ GH+++A E++ + G +
Sbjct: 121 LASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQ 180
Query: 351 SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL 410
+V+ +NS++ C + A L + M G K + TY L G +G ++A + L
Sbjct: 181 TVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFL 240
Query: 411 ELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTL 470
+ R N R +E L+ G +E+ +++ ++ K + +N L
Sbjct: 241 DEMSRRGFNPPARGRDLLIEGLLN-------AGYLESAKEMVSKMTKGGFVPDIQTFNIL 293
Query: 471 IKAYAKA 477
I+A +K+
Sbjct: 294 IEAISKS 300
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 12/223 (5%)
Query: 195 NMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY--- 251
+ M +L M + V P + I M H + + F + V+ + S+
Sbjct: 168 SFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNAL 227
Query: 252 --CILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNI 309
C+ +H +AA++ A + ++ ++ S ++++ + LG +E+E+V +
Sbjct: 228 LRCLCERSHV-----SAAKSVFNAKKGNIPFDSCS-YNIMISGWSKLGEVEEMEKVLKEM 281
Query: 310 RELPF-VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVI 368
E F SY IE GR G + + EI+ ++ + +N+M+ +
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDF 341
Query: 369 DKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLE 411
D++ R Y+ M C+ N TY +L G +K AL+ E
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 291 ILYGYLGNRKELERVWSNIRELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLK 350
++ G N +++E ++P + L + + RIG + A I+ + + +
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA----R 237
Query: 351 SVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTL 410
+ +N+++ Y ++G D A + NM+ G + +A+T + C +SG L
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG-------RL 290
Query: 411 ELGKRLP--INKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYN 468
++G+ + IN R ++ L ++++A+ GD+EN +FE + R N
Sbjct: 291 DVGREVHSLINHRGIELNQFVSNAL--IDMYAKCGDLENATSVFESIS----VRSVACCN 344
Query: 469 TLIKAYA 475
++I A
Sbjct: 345 SMISCLA 351
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 61 LRSWMRDGFPVRSNDVFHAINRLRKLKMNKRALEVMEWVIRERPYRPRELDYSYLVEFTT 120
L W + G+ V + + I L K ALE +W+ + + D + +
Sbjct: 56 LEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCAAQLHLVN 115
Query: 121 KLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGV--IRLSLEYMKRMRELGYPISHL 178
+ G+ EK+F +P + ++ +++++ K V + + K+MRELG+ +
Sbjct: 116 TVLGLEEAEKMFKNIPEKMRDY----SVLLSSYTKPVRTVDKAEATFKKMRELGFLLKPY 171
Query: 179 VFNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFS 237
+FN +I L+ R +M+ KLL ++K + + N + ++ AN + +E + S
Sbjct: 172 LFNSMICLYGQLQ-RLDMVEKLLYKLKKNNMEVGSLKVNNVSRVYANINAMEKFKTWVS 229
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 112/250 (44%), Gaps = 9/250 (3%)
Query: 180 FNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLM 239
+++LI +H+ + +++ ++L +M + + P + T L+ + + N E F +
Sbjct: 387 YSKLIHIHAKENHIEDV-ERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENL 445
Query: 240 KLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNR 299
K + P+E Y + + A E ++ ++ + LL Y +G+
Sbjct: 446 KSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDA 505
Query: 300 KELERVWSNIR---ELPFVRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFN 356
+ S+++ + P + ++Y L +EA+G+ G +++A+ + EM +
Sbjct: 506 NGAAGISSSMQYASDGP-LSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIA 564
Query: 357 SMMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQA----LKTLEL 412
+++ Y +DKA RL ++ +G + ITY L G+ E+A +K +L
Sbjct: 565 NLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQL 624
Query: 413 GKRLPINKRV 422
G+ P +V
Sbjct: 625 GEAPPFELQV 634
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 40/157 (25%)
Query: 291 ILYGYLGNRKELER--VWSNIRELPFVRTKS-YMLAIEAFGRIGHLERAEEIWLEMESAK 347
I+ G N+K+LE ++ N+++ + + Y I F G L A ++W EM K
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM-IKK 347
Query: 348 GLKS--------------------VEQF----------------NSMMTVYCKHGVIDKA 371
G++ VE F N+M+ +C HG D+A
Sbjct: 348 GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEA 407
Query: 372 ARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALK 408
++KNM G NAITY L G K E+ LK
Sbjct: 408 FEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLK 444
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 13/265 (4%)
Query: 135 VPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRK 194
V SEF +E + L+ A D G + E +K+ + G V+ +LI
Sbjct: 207 VESEFDSERI-RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG-NY 264
Query: 195 NMMPKLLTQMKADKVTPHVSTYNILMK-IEANEHNLENLMRFFSLMKLRQVEPNEISYCI 253
M ++L M A P + Y ++K + N+ LE F +L K + P+ + Y
Sbjct: 265 ACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL-KDKGYAPDRVVYTT 323
Query: 254 LAYAHA-VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIREL 312
+ L +A + + E ++K M N ++ ++++G+ R E+ V + E+
Sbjct: 324 MIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA---YNVMIHGHF-KRGEISLVEAFYNEM 379
Query: 313 PFVRTKSYMLA----IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVI 368
ML+ I+ F G + A EI+ M + +N+++ +CK +
Sbjct: 380 LRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKV 439
Query: 369 DKAARLYKNMKANGCKANAITYRQL 393
+K +LYK +KA G K + + Y L
Sbjct: 440 EKGLKLYKELKALGLKPSGMAYAAL 464
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
Query: 315 VRTKSYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARL 374
+ T +Y I + G L A ++ +E+ + S + ++ CK G+ A +L
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL 747
Query: 375 YKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLS 434
+M + G N I Y + G K G E A++ + K + TP T S
Sbjct: 748 LDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVS-------RKMMGRVTPDAFTVSS 800
Query: 435 IVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYA-KAKIYDPK-LLRRMIL 490
+++ + +KGD+E +F E F + LIK + K ++ + + LLR M++
Sbjct: 801 MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 92/230 (40%), Gaps = 30/230 (13%)
Query: 282 NWSTLDVLLILYGYLGNRKELERVWSNIRELPFV-RTKSYMLAIEAFGRIGHLERAEEIW 340
N L+ L+ L+G LG K V+S E F K+Y L +EA + ++ A +
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 341 LEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANG---------------CKA 385
+M + L EQ +++T +CK G ++A +Y+ K CK
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKN 349
Query: 386 NA-ITYRQLALGCLKSGMEEQALK-------------TLELGKRLPINKRVRNSTPWLET 431
+ IT+ Q LG L + +K ++ K L ++ + P
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 432 TLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKAKIYD 481
+V ++ GD++ +++ + + + Y +I YAK + D
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 459
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 319 SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNM 378
SY + I +G LE A + +M S + ++ C G+IDKA L+ M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 379 KANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEI 438
GCK N TY L G + G E+A R + R+ P + T +++
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC----RKMVKDRI---FPSVITYNALING 380
Query: 439 FAEKGDVENVEKLFEELHKSKYCRYTF-VYNTLIKAYAK-AKIYDP-KLLRRMILGGARP 495
+ + G V +L + K + C+ +N L++ + K Y LL+RM+ G P
Sbjct: 381 YCKDGRVVPAFELLTVMEK-RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 114/267 (42%), Gaps = 15/267 (5%)
Query: 195 NMMPK---LLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISY 251
NM+ K +L +M + P + L+ +++ + F M+ + PN +
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYF 239
Query: 252 CILAYAHA-VARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIR 310
L Y +L A E V+ E + + LL Y + G + + +++R
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLE-PDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 311 ELPF-VRTKSYMLAIEAFGRI-GHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVI 368
+ F Y + I+A R ++ A +++EME + + ++++ +CK G+I
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI 358
Query: 369 DKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPW 428
DK + +M+ G + +TY Q+ + K E+ L+ +E KR R P
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR-------RGCHPD 411
Query: 429 LETTLSIVEIFAEKGDVENVEKLFEEL 455
L ++ + + G+V+ +L+ E+
Sbjct: 412 LLIYNVVIRLACKLGEVKEAVRLWNEM 438
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 138/320 (43%), Gaps = 26/320 (8%)
Query: 140 QNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPK 199
N + +L+ AC + + + ++ +LGY N LI +S ++ N
Sbjct: 113 HNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLI---NSYAVTGNFK-- 167
Query: 200 LLTQMKADKVT-PHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAH 258
L + D++ P ++N ++K ++ + F M E N IS+ + +
Sbjct: 168 -LAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM----AEKNAISWTTMISGY 222
Query: 259 AVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERVWSNIRELPFVRTK 318
A +N A ++ S + +L L LG ++ + + S + + +R
Sbjct: 223 VQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR-IRMD 281
Query: 319 SYM--LAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYK 376
S + + I+ + + G +E A E++ ++ KSV+ + ++++ Y HG +A +
Sbjct: 282 SVLGCVLIDMYAKCGEMEEALEVFKNIKK----KSVQAWTALISGYAYHGHGREAISKFM 337
Query: 377 NMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLPIN-KRVRNSTPWLETTLSI 435
M+ G K N IT+ + C +G+ E+ GK + + +R N P +E I
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEE-------GKLIFYSMERDYNLKPTIEHYGCI 390
Query: 436 VEIFAEKGDVENVEKLFEEL 455
V++ G ++ ++ +E+
Sbjct: 391 VDLLGRAGLLDEAKRFIQEM 410
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 125/333 (37%), Gaps = 12/333 (3%)
Query: 148 LVIACLDKGVIRLSLEYMKRMRELGYPISHLVFNRLIILHSSPSLRKNMMPKLLTQMKAD 207
L+ A G+ ++E RM+E +N ++ + + + + +M
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 208 KVTPHVSTYNILMKIEANEHNLENLMRFFSLMKLRQVEPNEISYCILAYAHAVARLNTAA 267
+P++ T+ ILM + + + F M R + PN ++Y IL + + +A
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTIL--ISGLCQRGSAD 250
Query: 268 ETYVEAVEKSMTGNNWSTL--DVLLILYGYLGNRKELERVWSNIRELPFV-RTKSYMLAI 324
+ E +GN ++ + LL + LG E + + FV + Y I
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 325 EAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGCK 384
+ R +A E++ M + + ++ K G I+ A +L +M + G
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 385 ANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKGD 444
+ Y + G+ LE G+ L + S P T ++ G
Sbjct: 371 PDTYCYNAVIKALCGRGL-------LEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 445 VENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
V E++F E+ KS +N LI K+
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 252 CILAYAHAVA------RLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNRKELERV 305
C++AY++ + RL+ A + ++ N W + L+ ++G + + E++
Sbjct: 422 CVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIW-IYNSLIDMHGRAMDLRRAEKI 480
Query: 306 WSNIRELPFVRTK-SYMLAIEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCK 364
W ++ + K SY I A+ R LER E++ E +G M+ V+ K
Sbjct: 481 WKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSK 540
Query: 365 HGVIDKAARLYKNMKANGCKANAITYRQLALGCLK-SGMEEQ 405
ID+ RL ++MK G + +A Y AL L+ +G+ Q
Sbjct: 541 TSRIDELMRLLQDMKVEGTRLDARLYSS-ALNALRDAGLNSQ 581
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 324 IEAFGRIGHLERAEEIWLEMESAKGLKSVEQFNSMMTVYCKHGVIDKAARLYKNMKANGC 383
+ + + G L RA ++ M + V +N+M+ Y + G + +A YK + +G
Sbjct: 120 VSGYVKSGMLVRARVVFDSMPE----RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI 175
Query: 384 KANAITYRQLALGCLKSGMEEQALKTLELGKRLPINKRVRNSTPWLETTLSIVEIFAEKG 443
K N ++ L C+KS + L+L ++ V + + SI++ +A+ G
Sbjct: 176 KFNEFSFAGLLTACVKS-------RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 444 DVENVEKLFEELHKSKYCRYTFVYNTLIKAYAK 476
+E+ ++ F+E+ + ++ TLI YAK
Sbjct: 229 QMESAKRCFDEM----TVKDIHIWTTLISGYAK 257
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 146/360 (40%), Gaps = 56/360 (15%)
Query: 120 TKLHGISHGEKLFTRVPSEFQNELLYNNLVIACLDKGVIRLSLEYMKRMRELGYPISHLV 179
K ++ K+F R+P ++ + +N +V G+ R++LE +K M E
Sbjct: 181 AKCRQVNEARKVFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVKSMCE--------- 229
Query: 180 FNRLIILHSSPSLRKNMMPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLMRFFSLM 239
+N+ P +T + V P VS L+ + H F SL+
Sbjct: 230 --------------ENLKPSFITIVS---VLPAVSALR-LISVGKEIHGYAMRSGFDSLV 271
Query: 240 KLRQVEPNEISYCILAYAHAVARLNTAAETYVEAVEKSMTGNNWSTLDVLLILYGYLGNR 299
+ + + C L TA + + +E+++ +W+++ + Y N
Sbjct: 272 NISTALVDMYAKC--------GSLETARQLFDGMLERNVV--SWNSM---IDAYVQNENP 318
Query: 300 KELERVWSNIRELPFVRTK-SYMLAIEAFGRIGHLERAEEIWLEMESAKGL-KSVEQFNS 357
KE ++ + + T S M A+ A +G LER I ++ GL ++V NS
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH-KLSVELGLDRNVSVVNS 377
Query: 358 MMTVYCKHGVIDKAARLYKNMKANGCKANAITYRQLALGCLKSGMEEQALKTLELGKRLP 417
++++YCK +D AA ++ +++ +++ + LG ++G AL
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFS------ 427
Query: 418 INKRVRNSTPWLETTLSIVEIFAEKGDVENVEKLFEELHKSKYCRYTFVYNTLIKAYAKA 477
R R P T +S++ AE + + + + +S + FV L+ YAK
Sbjct: 428 -QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486