Miyakogusa Predicted Gene

Lj0g3v0148479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0148479.1 Non Chatacterized Hit- tr|B9S9U5|B9S9U5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,40.49,9e-19,seg,NULL,CUFF.9084.1
         (244 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13130.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    54   1e-07

>AT3G13130.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: male gametophyte; Has 140 Blast
           hits to 132 proteins in 41 species: Archae - 2; Bacteria
           - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0;
           Other Eukaryotes - 34 (source: NCBI BLink). |
           chr3:4223008-4223613 FORWARD LENGTH=201
          Length = 201

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/31 (70%), Positives = 30/31 (96%)

Query: 214 STEELNKKFDDFIRRMKEDLRIEAQRHLVMV 244
           + EE+NKKFD+FIR+MKE+LRIEA+RHL++V
Sbjct: 171 TEEEMNKKFDEFIRKMKEELRIEAKRHLILV 201