Miyakogusa Predicted Gene
- Lj0g3v0147749.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0147749.1 Non Chatacterized Hit- tr|I1M6X6|I1M6X6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,28.83,2e-18,seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopeptide
repe,CUFF.9025.1
(307 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 281 4e-76
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 152 2e-37
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 7e-34
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 1e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 7e-33
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 3e-32
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 134 9e-32
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 132 4e-31
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 5e-31
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 5e-31
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 6e-31
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 131 6e-31
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 6e-30
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 8e-30
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 127 8e-30
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 9e-30
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 2e-29
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 125 3e-29
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 125 3e-29
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 125 4e-29
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 7e-29
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 8e-29
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 122 3e-28
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 120 2e-27
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 6e-27
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 7e-27
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 7e-27
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 8e-27
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 8e-27
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 116 2e-26
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 3e-26
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 7e-26
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 7e-26
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 8e-26
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 3e-25
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 7e-25
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 9e-25
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 110 1e-24
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 109 2e-24
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 2e-24
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 7e-24
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 8e-24
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 9e-24
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 107 1e-23
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 105 4e-23
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 105 5e-23
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 103 1e-22
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 1e-22
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 1e-22
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 2e-22
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 102 3e-22
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 102 4e-22
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 5e-22
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 6e-22
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 100 9e-22
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 3e-21
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 99 3e-21
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 98 7e-21
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 97 2e-20
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 6e-20
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 7e-20
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 7e-20
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 9e-20
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 9e-20
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 94 1e-19
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 94 1e-19
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 94 1e-19
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 92 4e-19
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 8e-19
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 3e-18
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 6e-18
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 6e-18
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 7e-18
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 88 7e-18
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 88 7e-18
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 87 1e-17
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 86 3e-17
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 5e-17
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 8e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 9e-17
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 77 2e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 2e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 7e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 8e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 8e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 70 2e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 65 5e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 2e-10
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 63 2e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 63 3e-10
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 61 8e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 61 1e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 60 2e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 59 3e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 59 3e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 59 5e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 6e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 58 7e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 7e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 9e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 1e-07
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 50 1e-06
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 50 3e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 183/241 (75%)
Query: 63 AECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARL 122
++ E ALVSAL SC+S + + GRQIH LK G SN +I NS++NMYAKC ++DA
Sbjct: 38 SDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAES 97
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
+F+ LD S NIM+ GYV++ +L +A +LFD+MP + CVSYTT+IKG QN+ + EA
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
+E+F++M + ++ N++TL VISACS G IW+CRM+ +LAIKL ++G V VSTNL+H
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
YCLC + +AR+LFD+MPERNLVT NVMLNGYSK GL++ A ELF++I +KD++SWGTMI
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
Query: 303 D 303
D
Sbjct: 278 D 278
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 134/242 (55%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ L + + +CS + R + SLA+KL F+ +L++MY C + DAR LF
Sbjct: 173 EVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFD 232
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
P + V+ N+M++GY KAG ++ A +LFD + K VS+ TMI G ++ + EAL
Sbjct: 233 EMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVY 292
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ +M+ + P+++ +++++SA +R +H +K D + ++H Y +
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAV 352
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
+ + A + F+ + ++ + N ++ G+ K G+V+ ARE+F++ DKD+ SW MI Y
Sbjct: 353 SNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGY 412
Query: 306 TQ 307
Q
Sbjct: 413 AQ 414
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ +V L + + S+G Q+H +K GF F+Q ++I+ YA I A F+
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
A S N +I+G+VK G ++ A ++FD K S+ MI G Q+ AL +
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 186 FKDMMSDS-VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
F++M+S S V P+ +T+++V SA S G + + H + ++ ++ Y
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 245 LCSGVGEARRLFDK--------MPERNLVTCNVMLNGYSKTGL 279
C + A +F + + N + C +G++K L
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLAL 527
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 174 VQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLV 233
+Q CF D +S + L++ + +C+ ++ R IH +K +D
Sbjct: 18 LQARCFSAPSRTHFDFSGESS-DTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNG 76
Query: 234 LVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
+ ++++ Y C + +A +F + + + N+M++GY ++ + A +LF+ +P++
Sbjct: 77 YICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPER 136
Query: 294 DVISWGTMIDSYTQ 307
+S+ T+I Y Q
Sbjct: 137 SCVSYTTLIKGYAQ 150
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 142/287 (49%), Gaps = 37/287 (12%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIF-CNARQHQNPAECELALVSALKSCSSIS 80
+ P LL W + +L DP ++++ C P V LKSC+
Sbjct: 94 IQEPNLLIW---NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV--LKSCAKSK 148
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
+ +G+QIH LKLG + ++ SLI+MY + G + DA +F P D VS +I
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
GY G ++NA +LFD +P K VS+ MI G + + EALE+FKDMM +V P++ T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
++ V+SAC++ G I R +H L +D G G
Sbjct: 269 MVTVVSACAQSGSIELGRQVH-----LWIDD---------------HGFGS--------- 299
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
NL N +++ YSK G ++ A LFER+P KDVISW T+I YT
Sbjct: 300 --NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 33/227 (14%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E +V+ + +C+ S GRQ+H GF SN I N+LI++Y+KCG
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG---------- 315
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+L+ AC LF+ +P K +S+ T+I G + + EAL +
Sbjct: 316 ---------------------ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL--AVDGLVLVSTNLMHAY 243
F++M+ PND+T+++++ AC+ G I R IH K V + T+L+ Y
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C + A ++F+ + ++L + N M+ G++ G D + +LF R+
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
SCS ++ PS H L ++ + +++ C ++ R++ + +
Sbjct: 4 SCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHN 63
Query: 135 CNIMISGYVKA-------GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
N +S ++ L A +F + + + TM +G + AL+++
Sbjct: 64 TNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYV 123
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M+S ++PN T V+ +C++ + IH +KL D + V T+L+ Y
Sbjct: 124 CMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNG 183
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ +A ++FDK P R++V+ ++ GY+ G ++ A++LF+ IP KDV+SW MI Y +
Sbjct: 184 RLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAE 243
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 33/149 (22%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKL--GFHSNTFIQNSLINMYAKCGSISDARLL 123
++ ++S L +C+ + + GR IH K G + + ++ SLI+MYAKCG I A +
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 124 FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEAL 183
F + S N MI G+ G+ D + LF M G
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG--------------------- 465
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFG 212
+ P+D+T + ++SACS G
Sbjct: 466 ----------IQPDDITFVGLLSACSHSG 484
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 127/228 (55%), Gaps = 5/228 (2%)
Query: 51 RIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINM 110
R+ C++ H S LK+CS++S+ + QIH+ KLG+ ++ + NSLIN
Sbjct: 105 RMLCSSAPHN-----AYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINS 159
Query: 111 YAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMI 170
YA G+ A LLF P D VS N +I GYVKAG++D A LF M K +S+TTMI
Sbjct: 160 YAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMI 219
Query: 171 KGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD 230
G VQ D EAL++F +M + V P++++L N +SAC++ G + + IH+ K +
Sbjct: 220 SGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIR 279
Query: 231 GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
++ L+ Y C + EA +F + ++++ +++GY+ G
Sbjct: 280 MDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%)
Query: 154 LFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGE 213
+FD + MI+G +D +L +++ M+ S N T +++ ACS
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 214 IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNG 273
IHA KL + V +L+++Y + A LFD++PE + V+ N ++ G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 274 YSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
Y K G +D+A LF ++ +K+ ISW TMI Y Q
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQ 224
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 43/229 (18%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
++L +AL +C+ + + QG+ IHS K ++ + LI+MYAKC
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC------------ 295
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
G+++ A ++F + K ++T +I G + EA+ F
Sbjct: 296 -------------------GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKF 336
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+M + PN +T V++ACS G + ++I +++ + + H C+
Sbjct: 337 MEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-----YSMERDYNLKPTIEHYGCIV 391
Query: 247 SGVG------EARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFE 288
+G EA+R +MP + N V +L +++ E+ E
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGE 440
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 133/245 (54%), Gaps = 3/245 (1%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ L + L S ++ G+++HS +KLG N + NSL+NMYAKCG A+ +F
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
V D S N MI+ +++ GQ+D A F+ M + V++ +MI G Q AL++
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 186 FKDMMSDSVV-PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
F M+ DS++ P+ TL +V+SAC+ ++ + IH+ + D +V L+ Y
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 245 LCSGVGEARRLFDKMPERNLVT--CNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
C GV ARRL ++ ++L +L+GY K G ++ A+ +F + D+DV++W MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 303 DSYTQ 307
Y Q
Sbjct: 386 VGYEQ 390
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 140/253 (55%), Gaps = 8/253 (3%)
Query: 63 AECELALVSALKSCSSI----SSPSQGR----QIHSLALKLGFHSNTFIQNSLINMYAKC 114
A L+L + L+ C+++ + S GR +H +K G + ++ N+L+N+Y+K
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 115 GSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLV 174
G AR LF P+ S N ++S Y K G +D+ C+ FD +P + VS+TTMI G
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 175 QNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVL 234
+ +A+ V DM+ + + P TL NV+++ + + + +H+ +KL + G V
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 235 VSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
VS +L++ Y C A+ +FD+M R++ + N M+ + + G +D+A FE++ ++D
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 295 VISWGTMIDSYTQ 307
+++W +MI + Q
Sbjct: 243 IVTWNSMISGFNQ 255
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ- 125
L S L +C+++ G+QIHS + GF + + N+LI+MY++CG + AR L +
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 126 -ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
L ++ GY+K G ++ A +F + + V++T MI G Q+ +GEA+
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
+F+ M+ PN TL ++S S + + + IH A+K V VS L+ Y
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 245 LCSGVGEARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ A R FD + ER+ V+ M+ ++ G + A ELFE
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 73/228 (32%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
G+QIH A+K G + + N+LI MYAK
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAK------------------------------ 460
Query: 144 KAGQLDNACQLFDIMP-GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
AG + +A + FD++ + VS+T+MI L Q+ EALE+F+ M+ + + P+ +T +
Sbjct: 461 -AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYV 519
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER 262
V SAC+ HA GL V + R+ FD M +
Sbjct: 520 GVFSACT-----------HA--------GL----------------VNQGRQYFDMMKDV 544
Query: 263 NLVTCNV-----MLNGYSKTGLVDMARELFERIP-DKDVISWGTMIDS 304
+ + + M++ + + GL+ A+E E++P + DV++WG+++ +
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 143/271 (52%), Gaps = 13/271 (4%)
Query: 37 IKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
I++ + L P+ + +F + LV+ L C+S+ + S G+Q+H A+
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
N F+ N L++MYAKCG + +A +F V D VS N M++GY + G+ ++A +LF+
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 157 IMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
M + V+++ I G Q EAL V + M+S + PN++TL++V+S C+ G
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
Query: 213 EIWNCRMIHALAIKLAVD-------GLVLVSTNLMHAYCLCSGVGEARRLFDKM--PERN 263
+ + + IH AIK +D +V L+ Y C V AR +FD + ER+
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERD 439
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
+VT VM+ GYS+ G + A EL + ++D
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 36/240 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
K+C ISS G H+L+L GF SN F+ N+L+ MY++C S+SDAR +F V D
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGK-GCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
VS N +I Y K G+ A ++F M + GC
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCR--------------------------- 226
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
P+++TL+NV+ C+ G + +H A+ + + V L+ Y C + E
Sbjct: 227 ----PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
A +F M +++V+ N M+ GYS+ G + A LFE++ ++ DV++W I Y Q
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKL-------GFHSNTFIQNSLINMYAKCGSIS 118
E+ L+S L C+S+ + G++IH A+K G + N LI+MYAKC +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 119 DARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDC 178
AR +F + L P ++ V++T MI G Q+
Sbjct: 425 TARAMFDS---LSPKERDV--------------------------VTWTVMIGGYSQHGD 455
Query: 179 FGEALEVFKDMMSD--SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
+ALE+ +M + PN T+ + AC+ + + IHA A++ + + L
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 237 TN-LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+N L+ Y C + +AR +FD M +N VT ++ GY G + A +F+ +
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 99 SNTFIQNSLINMYA---------KCGSISDARLLFQACPVLDPVSCNI---MISGYVKAG 146
S+ +I+ SL + A KC +IS +L+ Q ++ N+ +IS Y+ G
Sbjct: 14 SHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVG 73
Query: 147 QLDNACQLFDIMP--GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
L +A L P G + ++I+ N C + L +F M S S P++ T V
Sbjct: 74 CLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFV 133
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
AC + HAL++ V V L+ Y C + +AR++FD+M ++
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDK 293
V+ N ++ Y+K G +A E+F R+ ++
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNE 222
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 11/290 (3%)
Query: 2 LVLISASFRFRIVHRSLSL-ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQ 60
L+ +S+SF + SL +L +P+ W I++ S+ P+ + +F
Sbjct: 58 LISVSSSFG-ETQYASLVFNQLQSPSTFTW---NLMIRSLSVNHKPREALLLFILMMISH 113
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA 120
+ +K+C + SS G Q+H LA+K GF ++ F QN+L+++Y KCG
Sbjct: 114 QSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSG 173
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
R +F P VS M+ G V QLD+A +F+ MP + VS+T MI V+N
Sbjct: 174 RKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPD 233
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVL---VST 237
EA ++F+ M D V PN+ T++N++ A ++ G + R +H A K +G VL + T
Sbjct: 234 EAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK---NGFVLDCFLGT 290
Query: 238 NLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
L+ Y C + +AR++FD M ++L T N M+ G + A LF
Sbjct: 291 ALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLF 340
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 33/235 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L++CS+ S Q +QIH+ +K ++ + LI++ + G A L+F
Sbjct: 27 LRTCSNFS---QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+ N+MI + A LF +M MI Q D F
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILM----------MISHQSQFDKF------------- 120
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
T VI AC I +H LAIK V LM Y C
Sbjct: 121 -------TFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSG 173
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
R++FDKMP R++V+ ML G +D A +F ++P ++V+SW MI +Y +
Sbjct: 174 RKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVK 228
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 37/166 (22%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E +V+ L++ + + S S GR +H A K GF + F+ +LI+MY+KCGS
Sbjct: 251 EFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGS--------- 301
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
L +A ++FD+M GK ++ +MI L + C EAL +
Sbjct: 302 ----------------------LQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSL 339
Query: 186 FKDMMSD-SVVPNDLTLMNVISACSRFGEI-----WNCRMIHALAI 225
F++M + SV P+ +T + V+SAC+ G + + RMI I
Sbjct: 340 FEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 121/224 (54%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L S K+ + GRQ+H + +K G ++FI+N++++MY CG + +A +F
Sbjct: 127 LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLG 186
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D V+ N MI G+ K G +D A LFD MP + VS+ +MI G V+N F +AL++F
Sbjct: 187 MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF 246
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
++M V P+ T++++++AC+ G R IH ++ + +V T L+ YC C
Sbjct: 247 REMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ E +F+ P++ L N M+ G + G + A +LF +
Sbjct: 307 GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSEL 350
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM--SDSVVPNDLTLMNVI 205
++ A +F + K + T+I+G ++ A+ +F DM+ S SV P LT +V
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
A R G+ + R +H + IK ++ + ++H Y C + EA R+F M ++V
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 266 TCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
N M+ G++K GL+D A+ LF+ +P ++ +SW +MI + +
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVR 235
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+VS L +C+ + + QGR IH ++ F N+ + +LI+MY KCG I
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI--------- 309
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ +F+ P K + +MI GL N A+++F
Sbjct: 310 ----------------------EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLF 347
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIKLAVDGLVLVSTNLMHAYCL 245
++ + P+ ++ + V++AC+ GE+ + K ++ + T +++
Sbjct: 348 SELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGG 407
Query: 246 CSGVGEARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMAR 284
+ EA L MP E + V + +L+ K G V+MA+
Sbjct: 408 AGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK 447
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 130/252 (51%), Gaps = 32/252 (12%)
Query: 88 IHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF----------------------- 124
+L KLGF + +++N +++MY K S+ AR +F
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGN 182
Query: 125 --QAC------PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
+AC P D VS +MI+G+ K L+NA + FD MP K VS+ M+ G QN
Sbjct: 183 KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQN 242
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
+AL +F DM+ V PN+ T + VISACS + R + L + V V
Sbjct: 243 GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVK 302
Query: 237 TNLMHAYCLCSGVGEARRLFDKM-PERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
T L+ + C + ARR+F+++ +RNLVT N M++GY++ G + AR+LF+ +P ++V
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV 362
Query: 296 ISWGTMIDSYTQ 307
+SW ++I Y
Sbjct: 363 VSWNSLIAGYAH 374
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 18/266 (6%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNA-RQHQNPAECELALVSALKSCSSI 79
+P +++ W +D +R+F + R P E +V + +CS
Sbjct: 223 RMPEKSVVSWNAMLSGYAQNGFTED---ALRLFNDMLRLGVRPNETTWVIV--ISACSFR 277
Query: 80 SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV-LDPVSCNIM 138
+ PS R + L + N F++ +L++M+AKC I AR +F + V+ N M
Sbjct: 278 ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAM 337
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS--DSVVP 196
ISGY + G + +A QLFD MP + VS+ ++I G N A+E F+DM+ DS P
Sbjct: 338 ISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS-KP 396
Query: 197 NDLTLMNVISACSRFG--EIWNC--RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+++T+++V+SAC E+ +C I IKL G +L+ Y + EA
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY----RSLIFMYARGGNLWEA 452
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTG 278
+R+FD+M ER++V+ N + ++ G
Sbjct: 453 KRVFDEMKERDVVSYNTLFTAFAANG 478
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 154 LFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGE 213
+FD + +M K + D + L +++ ++P+ + VI + RFG
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 214 IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNG 273
+ AL KL V +M Y V AR++FD++ +R NVM++G
Sbjct: 122 -----LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 274 YSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
Y K G + A +LF+ +P+ DV+SW MI + +
Sbjct: 177 YWKWGNKEEACKLFDMMPENDVVSWTVMITGFAK 210
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDARLLFQAC 127
L S L+ C S QG+ IH GF NT + N LI MY KCG DA +F
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
+ + S N M+SGYVK+G L A +FD MP + VS+ TM+ G Q+ EAL +K
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
+ + N+ + +++AC + ++ R H + V++S +++ AY C
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ A+R FD+M +++ +++GY+K G ++ A +LF +P+K+ +SW +I Y +
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + L +C RQ H L GF SN + S+I+ YAKCG + A+ F
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
V D +ISGY K G ++ A +LF MP K VS+T +I G V+ AL++
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+ M++ V P T + + A + + + + IH I+ V +V ++L+ Y
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 246 CSGVGEARRLFDKMPER-NLVTCNVMLNGYSKTGL 279
+ + R+F ++ + V N M++ ++ GL
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGL 393
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 32/148 (21%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ S L + +SI+S G++IH ++ N + +SLI+MY+K GS
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS--------- 361
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK-GCVSYTTMIKGLVQNDCFGEALE 184
L+ + ++F I K CV + TMI L Q+ +AL
Sbjct: 362 ----------------------LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALR 399
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFG 212
+ DM+ V PN TL+ +++ACS G
Sbjct: 400 MLDDMIKFRVQPNRTTLVVILNACSHSG 427
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 131/235 (55%), Gaps = 6/235 (2%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+K+C+++ S GRQ+H + + ++ +++SL++MYAKCG ++ A+ +F + V +
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+S M+SGY K+G+ + A +LF I+P K S+T +I G VQ+ EA VF +M +
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Query: 193 SV-VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
V + + L L +++ AC+ R +H L I L D V +S L+ Y CS V
Sbjct: 232 RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIA 291
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
A+ +F +M R++V+ ++ G ++ G + A L++ D++S G + T
Sbjct: 292 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD-----DMVSHGVKPNEVT 341
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 98/186 (52%), Gaps = 6/186 (3%)
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
+ Q CP+ N +++ Y K G +A Q+FD MP + +++ +++ L Q + G+
Sbjct: 34 IVQCCPL-----ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKT 88
Query: 183 LEVFKDMMSDSVV-PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
L VF + S S + P+D ++ AC+ G I + R +H I +V ++L+
Sbjct: 89 LSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVD 148
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTM 301
Y C + A+ +FD + +N ++ M++GY+K+G + A ELF +P K++ SW +
Sbjct: 149 MYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTAL 208
Query: 302 IDSYTQ 307
I + Q
Sbjct: 209 ISGFVQ 214
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 52 IFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMY 111
+F R+ + L L S + +C+++++ GRQ+H L + LGF S FI N+LI+MY
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 112 AKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIK 171
AKC + A+ +F D VS +I G + GQ + A L+D
Sbjct: 284 AKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD--------------- 328
Query: 172 GLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDG 231
DM+S V PN++T + +I ACS G + R + K
Sbjct: 329 ----------------DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK----- 367
Query: 232 LVLVSTNLMHAYCLCSGVG------EARRLFDKMP 260
+ +L H CL +G EA L MP
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 14/222 (6%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LK+C+ +G+QIH LALK GF + F+ ++L+ MY CG + DAR+LF +
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 131 --------------DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
+ V N+MI GY++ G A LFD M + VS+ TMI G N
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
F +A+EVF++M + PN +TL++V+ A SR G + +H A + ++
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
+ L+ Y C + +A +F+++P N++T + M+NG++ G
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHG 354
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 17/176 (9%)
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE--ALEVFKDMMSDSVV-PNDLTLMNV 204
LD A ++F+ MP + C S+ T+I+G ++D A+ +F +MMSD V PN T +V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK------ 258
+ AC++ G+I + IH LA+K G V +NL+ Y +C + +AR LF K
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 259 ---MPER-----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
M +R +V NVM++GY + G AR LF+++ + V+SW TMI Y+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYS 250
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ LVS L + S + S G +H A G + + ++LI+MY+KCG I
Sbjct: 275 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII--------- 325
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ A +F+ +P + ++++ MI G + G+A++ F
Sbjct: 326 ----------------------EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 363
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M V P+D+ +N+++ACS G + R + + +VDGL + H C+
Sbjct: 364 CKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV--SVDGL---EPRIEHYGCMV 418
Query: 247 SGVG------EARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMAREL 286
+G EA MP + + V +L G V+M + +
Sbjct: 419 DLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
E+ +P L V IK+ S +DP+ + + C ++ + + +L LK+CS +
Sbjct: 82 EVEDPFLWNAV-----IKSHSHGKDPRQALLLLCLMLENGVSVD-KFSLSLVLKACSRLG 135
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
G QIH K G S+ F+QN LI +Y KCG + +R +F P D VS N MI
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 141 GYVKAGQLDNACQLFDIMP--GKGCVSYTTMIKGLVQ-NDCFGEALEVFKDMMSDSVVPN 197
GYVK G + +A +LFD+MP K +S+ +MI G Q +D A ++F DM ++
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS- 254
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD 257
WN +DG Y + +A+ LFD
Sbjct: 255 -----------------WNS----------MIDG-----------YVKHGRIEDAKGLFD 276
Query: 258 KMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
MP R++VT M++GY+K G V A+ LF+++P +DV+++ +M+ Y Q
Sbjct: 277 VMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
NS+I+ Y K G I DA+ LF P D V+ MI GY K G + +A LFD MP + V
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDS-VVPNDLTLMNVISACSRFGEIWNCRMIHAL 223
+Y +M+ G VQN EALE+F DM +S ++P+D TL+ V+ A ++ G + +H
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
++ + L+ Y C + A +F+ + +++ N M+ G + GL + A
Sbjct: 376 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA 435
Query: 284 RELFERI 290
++ +I
Sbjct: 436 FDMLLQI 442
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 133/278 (47%), Gaps = 43/278 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L+ C++ G+ IHS+ +KLG S + NS++ +YAKCG + A F+ D
Sbjct: 188 LQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV 247
Query: 133 -----------------------------------VSCNIMISGYVKAGQLDNACQLFDI 157
V+ NI+I GY + G+ D A L
Sbjct: 248 IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQK 307
Query: 158 MPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGE 213
M G ++T MI GL+ N +AL++F+ M VVPN +T+M+ +SACS
Sbjct: 308 METFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 214 IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNG 273
I +H++A+K+ VLV +L+ Y C + +AR++FD + +++ T N M+ G
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 427
Query: 274 YSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
Y + G A ELF R+ D ++I+W TMI Y +
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 133/252 (52%), Gaps = 17/252 (6%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ ++SA+ +CS + +QG ++HS+A+K+GF + + NSL++MY+KCG + DAR +F +
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEA 182
D + N MI+GY +AG A +LF M +++ TMI G ++N GEA
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI--KLAVDGLVLVSTNLM 240
+++F+ M D V + N+I A G I N + AL + K+ + S ++
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIA----GYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 241 HAYCLCS---GVGEARRLFDKMPERNL----VTCNVMLNGYSKTGLVDMARELFERIPDK 293
C+ G R + + RNL N + + Y+K+G ++ +R +F + K
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK 588
Query: 294 DVISWGTMIDSY 305
D+I+W ++I Y
Sbjct: 589 DIITWNSLIGGY 600
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 36/239 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L+SC S GR +H+ L + F++ L++MYAKCG I+DAR
Sbjct: 88 LESCIDSGSIHLGRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADAR----------- 135
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
++FD M + +++ MI + + + E ++F+ MM D
Sbjct: 136 --------------------KVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V+P+D ++ C+ G++ ++IH++ IKL + + VS +++ Y C + A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV----ISWGTMIDSYTQ 307
+ F +M ER+++ N +L Y + G + A EL + + + + ++W +I Y Q
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ ++S L +C+++ R+IH L+ + ++N+L + YAK G I +R +F
Sbjct: 525 VTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFD------IMPGKGCVSYTTMIKGLVQNDCFG 180
D ++ N +I GYV G A LF+ I P +G +S + GL+ N
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGN--VD 642
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACS 209
E +VF + ND ++ + CS
Sbjct: 643 EGKKVFYS------IANDYHIIPALEHCS 665
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 173 LVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL 232
L +N EA + + T + ++ +C G I R++HA L +
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-RFGLFTEPD 114
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
V V T L+ Y C + +AR++FD M ERNL T + M+ YS+ +LF R+
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF-RLMM 173
Query: 293 KDVI 296
KD +
Sbjct: 174 KDGV 177
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 1/222 (0%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ L++ LK SS S G+QIH +KLGF S + + L+ MYA G ISDA+ +F
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ V N ++ G + G +++A QLF M K VS+ MIKGL QN EA+E
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F++M + + +V+ AC G I + IHA I+ + V + L+ YC
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
C + A+ +FD+M ++N+V+ M+ GY +TG + A ++F
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 5/239 (2%)
Query: 73 LKSCSSISSPSQGR---QIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
+K C + + +Q R IH ++ + TF+ N++++ YA S + AR +F P
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
+ S N ++ Y KAG + F+ +P + V++ +I+G + G A++ + M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 190 MSD-SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M D S +TLM ++ S G + + IH IKL + +LV + L++ Y
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ +A+++F + +RN V N ++ G G+++ A +LF R +KD +SW MI Q
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQ 247
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L +C + + ++G+QIH+ ++ F + ++ ++LI+MY KC
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC---------------- 318
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
C L A +FD M K VS+T M+ G Q EA+++F DM
Sbjct: 319 ---KC------------LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ P+ TL ISAC+ + H AI + V VS +L+ Y C +
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
++ RLF++M R+ V+ M++ Y++ G +LF+++
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 47 QHCIRIFCN-ARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
+ ++IF + R +P L A+ +C+++SS +G Q H A+ G + N
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLG--QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSN 410
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
SL+ +Y KCG I D+ LF V D VS M+S Y + G+ QLFD
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD--------- 461
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
M+ + P+ +TL VISACSR G
Sbjct: 462 ----------------------KMVQHGLKPDGVTLTGVISACSRAG 486
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 129/243 (53%), Gaps = 32/243 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + S L +CS ++ ++G Q+HSL K F S+ +I ++L++MY+KCG+++DA+
Sbjct: 152 EYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQ---- 207
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
++FD M + VS+ ++I QN EAL+V
Sbjct: 208 ---------------------------RVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK-LAVDGLVLVSTNLMHAYC 244
F+ M+ V P+++TL +VISAC+ I + +H +K + +++S + Y
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
CS + EAR +FD MP RN++ M++GY+ AR +F ++ +++V+SW +I
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 305 YTQ 307
YTQ
Sbjct: 361 YTQ 363
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 112/203 (55%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKA 145
R +H+ +K GF + FIQN LI+ Y+KCGS+ D R +F P + + N +++G K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 146 GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
G LD A LF MP + ++ +M+ G Q+D EAL F M + V N+ + +V+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
SACS ++ +H+L K V + + L+ Y C V +A+R+FD+M +RN+V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 266 TCNVMLNGYSKTGLVDMARELFE 288
+ N ++ + + G A ++F+
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQ 242
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 117/232 (50%), Gaps = 7/232 (3%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLG-FHSNTFIQNSLINMYAKCGSISDARLLF 124
E+ L S + +C+S+S+ G+++H +K ++ + N+ ++MYAKC I +AR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ P+ + ++ MISGY A A +F M + VS+ +I G QN EAL
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAV------DGLVLVSTN 238
+F + +SV P + N++ AC+ E+ H +K + + V +
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 239 LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
L+ Y C V E +F KM ER+ V+ N M+ G+++ G + A ELF +
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
R +HA IK + + L+ AY C + + R++FDKMP+RN+ T N ++ G +K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 278 GLVDMARELFERIPDKDVISWGTMIDSYTQ 307
G +D A LF +P++D +W +M+ + Q
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQ 129
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 110/265 (41%), Gaps = 69/265 (26%)
Query: 45 DPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGF------H 98
+ + + +FC ++ ++ + + LK+C+ ++ G Q H LK GF
Sbjct: 366 ENEEALSLFCLLKR-ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 99 SNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIM 158
+ F+ NSLI+MY KC G V+ G L +F M
Sbjct: 425 DDIFVGNSLIDMYVKC--------------------------GCVEEGYL-----VFRKM 453
Query: 159 PGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
+ CVS+ MI G QN EALE+F++M+ P+ +T++ V+SAC G + R
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
H + + R F P R+ TC V L G + G
Sbjct: 514 ----------------------HYFSSMT------RDFGVAPLRDHYTCMVDLLG--RAG 543
Query: 279 LVDMARELFERIP-DKDVISWGTMI 302
++ A+ + E +P D + WG+++
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLL 568
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R + E+P P W I+A + DP I F + + +K+
Sbjct: 84 RKVFDEIPKPNSFAW---NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
+ +SS S G+ +H +A+K S+ F+ NSLI+ Y CG
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG-------------------- 180
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
LD+AC++F + K VS+ +MI G VQ +ALE+FK M S+ V
Sbjct: 181 -----------DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
+ +T++ V+SAC++ + R + + + V+ + ++ ++ Y C + +A+RL
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 256 FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
FD M E++ VT ML+GY+ + + ARE+ +P KD+++W +I +Y Q
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
P + +F + ++ + +V L +C+ I + GRQ+ S + + N + N
Sbjct: 213 PDKALELF-KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
++++MY KCGSI DA+ LF A D V+ M+ GY + + A ++ + MP K V+
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 166 YTTMIKGLVQNDCFGEALEVFKDM-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
+ +I QN EAL VF ++ + ++ N +TL++ +SAC++ G + R IH+
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
K + V++ L+H Y C + ++R +F+ + +R++ + M+ G + G + A
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 285 ELFERIPDKDV 295
++F ++ + +V
Sbjct: 452 DMFYKMQEANV 462
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 131 DPVSCNIM--ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
DP S + + ++ L+ A ++FD +P ++ T+I+ ++ F D
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120
Query: 189 MMSDSV-VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M+S+S PN T +I A + + + +H +A+K AV V V+ +L+H Y C
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ A ++F + E+++V+ N M+NG+ + G D A ELF+++ +DV
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 65/282 (23%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+P ++ W I A P + +F + +N ++ LVS L +C+ + +
Sbjct: 324 MPQKDIVAW---NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
GR IHS K G N + ++LI+MY+KCG + +R
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR-------------------- 420
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
++F+ + + ++ MI GL + C EA+++F M +V PN +T
Sbjct: 421 -----------EVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
NV ACS GLV + +L H G+ +PE
Sbjct: 470 TNVFCACSH-------------------TGLVDEAESLFHQMESNYGI---------VPE 501
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS-WGTMI 302
C V + G ++G ++ A + E +P S WG ++
Sbjct: 502 EKHYACIVDVLG--RSGYLEKAVKFIEAMPIPPSTSVWGALL 541
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 135/308 (43%), Gaps = 35/308 (11%)
Query: 12 RIVH-RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALV 70
RIV RSL + ++ W +D +F RQ + L
Sbjct: 223 RIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG---FGLFLRMRQEGDVKVNSNTLA 279
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
K+C +G QIH L ++ + F+ NSL++MY+K G + +A+ +F
Sbjct: 280 VMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK 339
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGL----------------- 173
D VS N +I+G V+ Q+ A +LF+ MPGK VS+T MIKG
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP 399
Query: 174 --------------VQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
V N + EAL F M+ V PN T +V+SA + ++
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQ 459
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
IH +K+ + + V +L+ YC C +A ++F + E N+V+ N M++GYS G
Sbjct: 460 IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 280 VDMARELF 287
A +LF
Sbjct: 520 GKKALKLF 527
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
N L++ Y + G ++A +FQ V + VSC+ M+ GY K G++ +A LFD M + +
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVP-NDLTLMNVISACSRFGEIWNCRMIHAL 223
++T MI G + F + +F M + V N TL + AC F IH L
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
++ ++ + + +LM Y +GEA+ +F M ++ V+ N ++ G + + A
Sbjct: 301 VSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEA 360
Query: 284 RELFERIPDKDVISWGTMIDSYT 306
ELFE++P KD++SW MI ++
Sbjct: 361 YELFEKMPGKDMVSWTDMIKGFS 383
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 7/202 (3%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
NS I+ +A+ G++ +A +F+ VS MIS Y + G++ A Q+FD MP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 165 SYTTMIKGLVQNDC-FGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHAL 223
SY MI +++N C G+A E+F D+ N ++ +I+ R G ++A
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPE----KNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
D + S L+ Y EA R+F M + +V+C+ M++GY K G + A
Sbjct: 170 TPVKFRDSVA--SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 284 RELFERIPDKDVISWGTMIDSY 305
R LF+R+ +++VI+W MID Y
Sbjct: 228 RSLFDRMTERNVITWTAMIDGY 249
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L + +S++ +G QIH +K+ ++ +QNSL++MY KCG+ +DA +F
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVF 186
+ VS N MISGY G A +LF ++ G V++ ++ V + F
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYF 562
Query: 187 KDMMS 191
K M S
Sbjct: 563 KSMKS 567
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 140/262 (53%), Gaps = 5/262 (1%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
+ +R+F + N + + L + LK+C+ + + G+QIH+ L G ++ + +
Sbjct: 171 AEEALRLF----KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNS 226
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
SL+N+YAKCG + A + + D S + +ISGY G+++ + LFD + +
Sbjct: 227 SLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVIL 286
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+ +MI G + N+ EAL +F +M +++ + TL VI+AC G + + +H A
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEMRNET-REDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
K + ++V++ L+ Y C EA +LF ++ + + N M+ Y G +D A+
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 286 LFERIPDKDVISWGTMIDSYTQ 307
+FERI +K +ISW +M + ++Q
Sbjct: 406 VFERIENKSLISWNSMTNGFSQ 427
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 119/223 (53%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L + + +C + G+Q+H A K G + + ++L++MY+KCGS +A LF
Sbjct: 320 TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV 379
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
D + N MI Y G++D+A ++F+ + K +S+ +M G QN C E LE F
Sbjct: 380 ESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFH 439
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M + ++++L +VISAC+ + + A A + +D +VS++L+ YC C
Sbjct: 440 QMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCG 499
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
V RR+FD M + + V N M++GY+ G A +LF+++
Sbjct: 500 FVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 35/274 (12%)
Query: 64 ECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFI-QNSLINMYAKCGSISDARL 122
+C V L+SCSS + + RQ + L LK GF S+ I N L+ MY++ G + AR
Sbjct: 24 DCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARN 83
Query: 123 LFQACP-------------------------------VLDPVSCNIMISGYVKAGQLDNA 151
LF P D S N+++SG+ KAG+L A
Sbjct: 84 LFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVA 143
Query: 152 CQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF 211
+LF+ MP K V+ +++ G + N EAL +FK++ + + +TL V+ AC+
Sbjct: 144 RRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAEL 200
Query: 212 GEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVML 271
+ + IHA + V+ ++++L++ Y C + A + +++ E + + + ++
Sbjct: 201 EALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALI 260
Query: 272 NGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
+GY+ G V+ +R LF+R ++ VI W +MI Y
Sbjct: 261 SGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 76/245 (31%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E++L S + +C+SISS G Q+ + A +G S+ + +SLI++Y KCG + R +F
Sbjct: 450 EVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFD 509
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D V N MISGY GQ G EA+++
Sbjct: 510 TMVKSDEVPWNSMISGYATNGQ------------------------GF-------EAIDL 538
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
FK M + P +T M V++AC+
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACN-----------------------------------Y 563
Query: 246 CSGVGEARRLFDKM-------PERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVIS 297
C V E R+LF+ M P++ +C M++ ++ G V+ A L E +P D D
Sbjct: 564 CGLVEEGRKLFESMKVDHGFVPDKEHFSC--MVDLLARAGYVEEAINLVEEMPFDVDGSM 621
Query: 298 WGTMI 302
W +++
Sbjct: 622 WSSIL 626
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 214 IWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLN 272
+W R + L +K + +V+V+ +L+ Y +G AR LFD+MP+RN + N M+
Sbjct: 44 LW--RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIE 101
Query: 273 GYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
GY +G + F+ +P++D SW ++ + +
Sbjct: 102 GYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAK 136
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 37/275 (13%)
Query: 18 LSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCS 77
LS+ LP+ L V IK+ S L+ P HC+ + N + S +KSC+
Sbjct: 65 LSVPLPDDFLFNSV-----IKSTSKLRLPLHCVAYYRRMLS-SNVSPSNYTFTSVIKSCA 118
Query: 78 SISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNI 137
+S+ G+ +H A+ GF +T++Q +L+ Y+KCG
Sbjct: 119 DLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG---------------------- 156
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
++ A Q+FD MP K V++ +++ G QN EA++VF M P+
Sbjct: 157 ---------DMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD 257
T ++++SAC++ G + +H I +D V + T L++ Y C VG+AR +FD
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 258 KMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
KM E N+ M++ Y G A ELF ++ D
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 121/231 (52%), Gaps = 3/231 (1%)
Query: 66 ELALVSALKSCSSISSPSQ--GRQIHSLALKLGFHSN-TFIQNSLINMYAKCGSISDARL 122
+ ++ L C +S S+ G +H A KLG N + ++I MY+K G ARL
Sbjct: 71 HITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARL 130
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
+F + V+ N MI GY+++GQ+DNA ++FD MP + +S+T MI G V+ EA
Sbjct: 131 VFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA 190
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
L F++M V P+ + ++ ++AC+ G + +H + V VS +L+
Sbjct: 191 LLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDL 250
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
YC C V AR++F M +R +V+ N ++ G++ G + F ++ +K
Sbjct: 251 YCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEK 301
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 164 VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF--GEIWNCRMIH 221
VS+T+ I L +N EA + F DM V PN +T + ++S C F G ++H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 222 ALAIKLAVD-GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLV 280
A KL +D V+V T ++ Y +AR +FD M ++N VT N M++GY ++G V
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 281 DMARELFERIPDKDVISWGTMIDSYTQ 307
D A ++F+++P++D+ISW MI+ + +
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVK 183
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 31/146 (21%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+A+++AL +C+++ + S G +H L F +N + NSLI++Y +CG + AR
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR----- 261
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
Q+F M + VS+ ++I G N E+L F
Sbjct: 262 --------------------------QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYF 295
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFG 212
+ M P+ +T ++ACS G
Sbjct: 296 RKMQEKGFKPDAVTFTGALTACSHVG 321
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 10/204 (4%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
N +I+ Y + G AR LF P D VS N+MI GYV+ L A +LF+IMP +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
S+ TM+ G QN C +A VF D M + ND++ ++SA + N +M A
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVF-DRMPE---KNDVSWNALLSAY-----VQNSKMEEACM 209
Query: 225 IKLAVDGLVLVSTN-LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
+ + + LVS N L+ + + EAR+ FD M R++V+ N ++ GY+++G +D A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 284 RELFERIPDKDVISWGTMIDSYTQ 307
R+LF+ P +DV +W M+ Y Q
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQ 293
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 39/203 (19%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
N L+ + K I +AR F + V D VS N +I+GY ++G++D A QLFD P +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
++T M+ G +QN EA E+F M + V WN
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVS------------------WNA------- 317
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
++ Y + A+ LFD MP RN+ T N M+ GY++ G + A+
Sbjct: 318 --------------MLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 363
Query: 285 ELFERIPDKDVISWGTMIDSYTQ 307
LF+++P +D +SW MI Y+Q
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQ 386
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
N N+++ Y + + A+ LF P + + N MI+GY + G++ A LFD MP
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
+ VS+ MI G Q+ EAL +F M + N + + +S C+ + +
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
+H +K + V L+ YC C + EA LF +M +++V+ N M+ GYS+ G
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 280 VDMARELFE 288
++A FE
Sbjct: 491 GEVALRFFE 499
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 57/216 (26%)
Query: 97 FHS-----NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNA 151
FHS T IQ S KCG D N+ IS Y++ G+ + A
Sbjct: 37 FHSLKRATQTQIQKSQTKPLLKCGDS-------------DIKEWNVAISSYMRTGRCNEA 83
Query: 152 CQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF 211
++F MP VSY MI G ++N F A ++F +M +V
Sbjct: 84 LRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVS--------------- 128
Query: 212 GEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVML 271
WN ++ Y +G+AR LF+ MPER++ + N ML
Sbjct: 129 ---WNV---------------------MIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 272 NGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+GY++ G VD AR +F+R+P+K+ +SW ++ +Y Q
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 100/237 (42%), Gaps = 64/237 (27%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
+ SAL +C+ + + G+Q+H +K G+ + F+ N+L+ MY KCGSI +A LF+
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE-ALEVF 186
D VS N MI+GY + G FGE AL F
Sbjct: 471 AGKDIVSWNTMIAGYSRHG--------------------------------FGEVALRFF 498
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ M + + P+D T++ V+SACS G LV + Y +
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTG---------------------LVDKGRQYFYTMT 537
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISWGTMI 302
G MP C V L G + GL++ A L + +P + D WGT++
Sbjct: 538 QDYG-------VMPNSQHYACMVDLLG--RAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 123/218 (56%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+K+ S + G Q HS ++ GF ++ +++NSL++MYA CG I+ A +F D
Sbjct: 124 IKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS M++GY K G ++NA ++FD MP + +++ MI G +N+CF +A+++F+ M +
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
VV N+ +++VIS+C+ G + + +K + +++ T L+ + C + +A
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+F+ +PE + ++ + ++ G + G A F ++
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
+A + M+ + P+++T +I A S + H+ ++ V V +L+
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGT 300
H Y C + A R+F +M R++V+ M+ GY K G+V+ ARE+F+ +P +++ +W
Sbjct: 160 HMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSI 219
Query: 301 MIDSYTQ 307
MI+ Y +
Sbjct: 220 MINGYAK 226
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 35/197 (17%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R + E+P+ L W + + I +F + + E +VS + S
Sbjct: 203 REMFDEMPHRNLFTWSIMINGYAKNNCFEK---AIDLF-EFMKREGVVANETVMVSVISS 258
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
C+ + + G + + +K N + +L++M+ +CG I A +F+ P D +S
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS- 317
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
++++IKGL + +A+ F M+S +
Sbjct: 318 ------------------------------WSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347
Query: 196 PNDLTLMNVISACSRFG 212
P D+T V+SACS G
Sbjct: 348 PRDVTFTAVLSACSHGG 364
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 32/250 (12%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C++ +GRQIH L +K G ++ F++N+L+N+Y + G AR + PV D
Sbjct: 147 LKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA 206
Query: 133 VSCN-------------------------------IMISGYVKAGQLDNACQLFDIMPGK 161
VS N MISGY AG + A ++FD MP +
Sbjct: 207 VSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR 266
Query: 162 GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV-VPNDLTLMNVISACSRFGEIWNCRMI 220
VS+ M+ C+ E LEVF M+ DS P+ TL++V+SAC+ G + +
Sbjct: 267 DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV 326
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLV 280
H K ++ ++T L+ Y C + +A +F +R++ T N +++ S GL
Sbjct: 327 HVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLG 386
Query: 281 DMARELFERI 290
A E+F +
Sbjct: 387 KDALEIFSEM 396
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
++ ++I+ + AL VF++M+ V P+ + V+ AC+ F R IH L
Sbjct: 107 THNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLF 166
Query: 225 IKLAVDGLVLVSTNLMHAY-------------------------CLCSG------VGEAR 253
IK + V V L++ Y L S V EAR
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEAR 226
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
LFD+M ERN+ + N M++GY+ GLV A+E+F+ +P +DV+SW M+ +Y
Sbjct: 227 ALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
LVS L +C+S+ S SQG +H K G F+ +L++MY+KCG I A +F+A
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D + N +IS + GL ++ ALE+F
Sbjct: 365 TSKRDVSTWNSIIS--------------------------DLSVHGLGKD-----ALEIF 393
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+M+ + PN +T + V+SAC+ G + R + + + + V + H C+
Sbjct: 394 SEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEM-----MSSVYRVEPTIEHYGCMV 448
Query: 247 SGVG------EARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+G EA L +++P + + +L + G ++ A + R+
Sbjct: 449 DLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRL 499
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 138/290 (47%), Gaps = 40/290 (13%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQH----QNPAECELALVSALKSCS 77
+ NP + W I+ S ++P+ ++ +H P ++ K C+
Sbjct: 113 IENPNIFSW---NVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL--FKVCA 167
Query: 78 SISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNI 137
+ S G I LKL + + N+ I+M+A CG + +AR +F PV D VS N
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
+I+GY K G+ + A + V+K M S+ V P+
Sbjct: 228 LINGYKKIGEAEKA-------------------------------IYVYKLMESEGVKPD 256
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD 257
D+T++ ++S+CS G++ + + + + + + LM + C + EARR+FD
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 258 KMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ +R +V+ M++GY++ GL+D++R+LF+ + +KDV+ W MI Q
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 8/234 (3%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
++ ++ + SCS + ++G++ + + G + N+L++M++KCG I +AR +F
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
VS MISGY + G LD + +LFD M K V + MI G VQ +AL +
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGE----IWNCRMIHALAIKLAVDGLVLVSTNLMH 241
F++M + + P+++T+++ +SACS+ G IW R I ++ L V + T+L+
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN----VALGTSLVD 432
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
Y C + EA +F + RN +T ++ G + G A F + D +
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGI 486
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 94/246 (38%), Gaps = 62/246 (25%)
Query: 58 QHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSI 117
Q N E+ ++ L +CS + + G IH K N + SL++MYAKCG+I
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 118 SDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQND 177
S+A +F + ++YT +I GL +
Sbjct: 441 SEALSVFHGIQT-------------------------------RNSLTYTAIIGGLALHG 469
Query: 178 CFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST 237
A+ F +M+ + P+++T + ++SAC G I R
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR------------------- 510
Query: 238 NLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVI 296
+ + F+ P+ L ++M++ + GL++ A L E +P + D
Sbjct: 511 ---------DYFSQMKSRFNLNPQ--LKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 297 SWGTMI 302
WG ++
Sbjct: 560 VWGALL 565
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 129 VLDPVSCNIMIS--GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+LDP + + +I+ ++ LD + ++ + S+ I+G +++ E+ ++
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 187 KDMMSD---SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
K M+ P+ T + C+ MI +KL ++ + V +H +
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 201
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C + AR++FD+ P R+LV+ N ++NGY K G + A +++ + + V
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 253
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 138/296 (46%), Gaps = 37/296 (12%)
Query: 2 LVLISASFRFRIVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQN 61
L+ S+SF R + +LP P + W I+ S Q + ++ N Q
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPW---NAIIRGYSRNNHFQDALLMYSNM-QLAR 114
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
+ LK+CS +S GR +H+ +LGF ++ F+QN LI +YAKC + AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
+F+ P +P + VS+T ++ QN E
Sbjct: 175 TVFEGLP-----------------------------LPERTIVSWTAIVSAYAQNGEPME 205
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNL 239
ALE+F M V P+ + L++V++A + ++ R IHA +K L ++ +L+S N
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
M Y C V A+ LFDKM NL+ N M++GY+K G A ++F + +KDV
Sbjct: 266 M--YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 38/266 (14%)
Query: 20 LELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSI 79
L LP T++ W + A + +P + IF R+ + +ALVS L + + +
Sbjct: 180 LPLPERTIVSWTAI---VSAYAQNGEPMEALEIFSQMRKMDVKPDW-VALVSVLNAFTCL 235
Query: 80 SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMI 139
QGR IH+ +K+G + SL MYAKCG ++ A++LF + + N MI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 140 SGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDL 199
SGY K G EA+++F +M++ V P+ +
Sbjct: 296 SGYAKNGYAR-------------------------------EAIDMFHEMINKDVRPDTI 324
Query: 200 TLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM 259
++ + ISAC++ G + R ++ + V +S+ L+ + C V AR +FD+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 260 PERNLVTCNVMLNGYSKTGLVDMARE 285
+R++V + M+ GY GL ARE
Sbjct: 385 LDRDVVVWSAMIVGY---GLHGRARE 407
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 78 SISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNI 137
S + +Q +QIH+ L LG + F+ LI+ + G I+ AR
Sbjct: 30 SATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR---------------- 73
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
Q+FD +P + +I+G +N+ F +AL ++ +M V P+
Sbjct: 74 ---------------QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD 257
T +++ ACS + R +HA +L D V V L+ Y C +G AR +F+
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 258 K--MPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+PER +V+ +++ Y++ G A E+F ++ DV
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 45 DPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS-PSQGRQIHSLALKLGFHSNTFI 103
D I +FC + H+ S L + ++ Q Q H+ ALK G T +
Sbjct: 128 DGYSAINLFCKMK-HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV 186
Query: 104 QNSLINMYAKCGS----ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
N+L+++Y+KC S + AR +F D S M++GYVK G D +L + M
Sbjct: 187 SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMD 246
Query: 160 GK-GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
V+Y MI G V + EALE+ + M+S + ++ T +VI AC+ G + +
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
+HA ++ D +L+ Y C EAR +F+KMP ++LV+ N +L+GY +G
Sbjct: 307 QVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 279 LVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ A+ +F+ + +K+++SW MI +
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAE 394
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALK---LGFHSNTFIQNSLINMYAKCGSISDARL 122
E S +++C++ G+Q+H+ L+ FH NSL+++Y KCG +AR
Sbjct: 286 EFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH----FDNSLVSLYYKCGKFDEARA 341
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
+F+ P D VS N ++SGYV +G + A +F M K +S+ MI GL +N E
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
L++F M + P D I +C+ G N + HA +K+ D + L+
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
Y C V EAR++F MP + V+ N ++ + G A +++E + K +
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKA 145
R +H + GF I N LI++Y K ++ AR LF D ++ M+SGY +
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCAS 93
Query: 146 GQLDNACQLFDIMP--GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
G + A +F+ P + V Y MI G N+ A+ +F M + P++ T +
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 204 VISACSRFGEIWN-CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG----VGEARRLFDK 258
V++ + + C HA A+K + VS L+ Y C+ + AR++FD+
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 259 MPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK-DVISWGTMIDSY 305
+ E++ + M+ GY K G D+ EL E + D ++++ MI Y
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 37/193 (19%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIF-CNARQHQNPAECELALVSALKSCSSI 79
E+ +L W+ + ++ +++F C R+ P C+ A A+KSC+ +
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEG---LKLFSCMKREGFEP--CDYAFSGAIKSCAVL 430
Query: 80 SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMI 139
+ G+Q H+ LK+GF S+ N+LI MYAKCG + +AR +F+ P LD VS N +I
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 140 SGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDL 199
+ L Q+ EA++V+++M+ + P+ +
Sbjct: 491 A-------------------------------ALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 200 TLMNVISACSRFG 212
TL+ V++ACS G
Sbjct: 520 TLLTVLTACSHAG 532
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
R +H I + L+ YC S + AR+LFD++ E + + M++GY
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 277 TGLVDMARELFERIPD--KDVISWGTMIDSYTQ 307
+G + +AR +FE+ P +D + + MI ++
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 39/222 (17%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKA 145
R+ L ++ N ++++ Y + +S A +LFQ P + VS N MI GY ++
Sbjct: 94 REARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQS 153
Query: 146 GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
G++D A +LFD MP + VS+ +M+K LVQ EA+ +F+ M VV
Sbjct: 154 GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS--------- 204
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
W M+ LA VD EARRLFD MPERN++
Sbjct: 205 ---------WTA-MVDGLAKNGKVD--------------------EARRLFDCMPERNII 234
Query: 266 TCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ N M+ GY++ +D A +LF+ +P++D SW TMI + +
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIR 276
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 108/194 (55%), Gaps = 3/194 (1%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
N N++I YA+ I +A LFQ P D S N MI+G+++ +++ AC LFD MP
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD-SVVPNDLTLMNVISACSRFGEIWNCR 218
K +S+TTMI G V+N EAL VF M+ D SV PN T ++++SACS + +
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK--MPERNLVTCNVMLNGYSK 276
IH L K +V++ L++ Y + AR++FD + +R+L++ N M+ Y+
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 277 TGLVDMARELFERI 290
G A E++ ++
Sbjct: 412 HGHGKEAIEMYNQM 425
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 70 VSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
VS L +CS ++ +G+QIH L K N + ++L+NMY+K G + AR +F V
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 130 --LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEAL 183
D +S N MI+ Y G A ++++ M G V+Y ++ + +
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Query: 184 EVFKDMMSDSVVP 196
E FKD++ D +P
Sbjct: 455 EFFKDLVRDESLP 467
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 32/101 (31%)
Query: 239 LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI-------- 290
L+ C + EAR+LFD +PER++VT ++ GY K G + ARELF+R+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 291 ------------------------PDKDVISWGTMIDSYTQ 307
P+++V+SW TMID Y Q
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 31/234 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
KSC+S+ S G+Q+H K G + +N+LI+MY K + DA +F D
Sbjct: 116 FKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+S N ++SGY + GQ+ A LF +M K VS+T MI G C+ EA++ F++M
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ P++++L++V+ +C++ G + + IH A
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYA---------------------------E 268
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
RR F K CN ++ YSK G++ A +LF ++ KDVISW TMI Y
Sbjct: 269 RRGFLKQTG----VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 103/217 (47%), Gaps = 5/217 (2%)
Query: 95 LGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV----KAGQLDN 150
+ FH ++N I + S ++ + + + + + M++ V K +D
Sbjct: 1 MAFHGIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDY 60
Query: 151 ACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV-VPNDLTLMNVISACS 209
A +LF+ + Y ++I+ N + + + ++K ++ S +P+ T + +C+
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 210 RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNV 269
G + + +H K V+ L+ Y + +A ++FD+M ER++++ N
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 270 MLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+L+GY++ G + A+ LF + DK ++SW MI YT
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYT 217
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 32/151 (21%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E++L+S L SC+ + S G+ IH A + GF T + N+LI MY+KCG IS A LF
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D +S + MISGY G A+E
Sbjct: 301 QMEGKDVISWSTMISGYAYHGNAHG-------------------------------AIET 329
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
F +M V PN +T + ++SACS G +W
Sbjct: 330 FNEMQRAKVKPNGITFLGLLSACSHVG-MWQ 359
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 35/307 (11%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R L L P P + ++ S +P + + +F + + +K+
Sbjct: 59 RRLLLCFPEPDAFMF---NTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKA 115
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCG-------------------- 115
+ S G Q+H ALK G S+ F+ +LI MY CG
Sbjct: 116 VENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAW 175
Query: 116 -----------SISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
++ AR +F V + S N+M++GY+KAG+L++A ++F MP + V
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 235
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
S++TMI G+ N F E+ F+++ + PN+++L V+SACS+ G +++H
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN-LVTCNVMLNGYSKTGLVDMA 283
K +V V+ L+ Y C V AR +F+ M E+ +V+ M+ G + G + A
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 284 RELFERI 290
LF +
Sbjct: 356 VRLFNEM 362
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 66/266 (24%)
Query: 70 VSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCG-SISDARLLFQACP 128
+S L SC ++ + +Q IH L +K G ++++ LI C SISDA
Sbjct: 9 LSLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI---LHCAISISDA-------- 54
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
L A +L P + T+++G ++D ++ VF +
Sbjct: 55 -------------------LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVE 95
Query: 189 MMSDSVV-PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
MM V P+ + VI A F + +H A+K ++ + V T L+ Y C
Sbjct: 96 MMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCG 155
Query: 248 GVGEARRLFDKMPERNLV-------------------------------TCNVMLNGYSK 276
V AR++FD+M + NLV + NVML GY K
Sbjct: 156 CVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK 215
Query: 277 TGLVDMARELFERIPDKDVISWGTMI 302
G ++ A+ +F +P +D +SW TMI
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMI 241
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 44/245 (17%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E++L L +CS S G+ +H K G+ + N+LI+MY++CG++ ARL+F+
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC-VSYTTMIKGLVQNDCFGEALE 184
M K C VS+T+MI GL + EA+
Sbjct: 329 G-------------------------------MQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
+F +M + V P+ ++ ++++ ACS G I + + + + + H C
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS-----EMKRVYHIEPEIEHYGC 412
Query: 245 LCSGVGEARRL---FD---KMP-ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
+ G + +L +D +MP + +L S G +++A ++ +R+ + D +
Sbjct: 413 MVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNN 472
Query: 298 WGTMI 302
G ++
Sbjct: 473 SGDLV 477
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 123/223 (55%), Gaps = 6/223 (2%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
ALKSC++ P G +H+ ++K F SN F+ +L++MY KC S+S AR LF P +
Sbjct: 54 ALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRN 113
Query: 132 PVSCNIMISGYVKAGQLDNACQLF---DIMPGKGCVSYTTMIKGLV-QNDCFGEALEVFK 187
V N MIS Y G++ A +L+ D+MP + S+ +IKGLV D A+E ++
Sbjct: 114 AVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYRAIEFYR 171
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M+ PN +TL+ ++SACS G + IH+ A + ++ + + L+ AY C
Sbjct: 172 KMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCG 231
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ + +FD M +R++V + +++ Y+ G + A + F+ +
Sbjct: 232 SIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM 274
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 60/242 (24%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
LALVSA CS+I + ++IHS A + + +++ L+ Y +CGSI +L+F +
Sbjct: 186 LALVSA---CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDS 242
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D V+ + +IS Y G ++ AL+ F
Sbjct: 243 MEDRDVVAWSSLISAYALHGDAES-------------------------------ALKTF 271
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFG-----EIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
++M V P+D+ +NV+ ACS G ++ RM ++ + D H
Sbjct: 272 QEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD----------H 321
Query: 242 AYCLC---SGVG---EARRLFDKMPER-NLVTCNVMLNGYSKTGLVDM----ARELFERI 290
CL S VG EA ++ MPE+ T +L G +++ AREL
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVE 381
Query: 291 PD 292
P+
Sbjct: 382 PE 383
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 5/272 (1%)
Query: 20 LELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSI 79
+E+P W I + + C+ +F + + +C S + +CS+
Sbjct: 162 VEMPKRVAFAW---NIMISGHAHCGKLESCLSLFKEMLESEFKPDC-YTFSSLMNACSAD 217
Query: 80 SSPS-QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIM 138
SS GR +H++ LK G+ S +NS+++ Y K GS DA ++ VL VS N +
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPND 198
I +K G+ + A ++F + P K V++TTMI G +N +AL F +MM V +
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDH 337
Query: 199 LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK 258
V+ ACS + + +MIH I G V L++ Y C + EA R F
Sbjct: 338 FAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGD 397
Query: 259 MPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ ++LV+ N ML + GL D A +L++ +
Sbjct: 398 IANKDLVSWNTMLFAFGVHGLADQALKLYDNM 429
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 126/264 (47%), Gaps = 4/264 (1%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
Q I +F R + + + + L +C+S+ + GR+I SL ++ GF ++ + NS
Sbjct: 52 QEAIALFTQLRFSDAKPD-DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNS 110
Query: 107 LINMYAKCGSISDARLLFQ--ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
LI+MY KC A +F+ C + V+ ++ Y+ A Q + A +F MP +
Sbjct: 111 LIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAF 170
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSR-FGEIWNCRMIHAL 223
++ MI G L +FK+M+ P+ T ++++ACS + RM+HA+
Sbjct: 171 AWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAV 230
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
+K V +++ Y +A R + + V+ N +++ K G + A
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKA 290
Query: 284 RELFERIPDKDVISWGTMIDSYTQ 307
E+F P+K++++W TMI Y +
Sbjct: 291 LEVFHLAPEKNIVTWTTMITGYGR 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPND 198
I+ K+G++ +A Q+FD MP V++ TM+ + EA+ +F + P+D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 199 LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK 258
+ ++S C+ G + R I +L I+ + V+ +L+ Y CS A ++F
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 259 M--PERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
M RN VT +L Y + A ++F +P + +W MI +
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 23 PNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSP 82
P ++ W I D + +R F + ++ A + L +CS ++
Sbjct: 298 PEKNIVTWTTM---ITGYGRNGDGEQALRFFVEMMKSGVDSD-HFAYGAVLHACSGLALL 353
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGY 142
G+ IH + GF ++ N+L+N+YAKCG I +A F D VS N M+ +
Sbjct: 354 GHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAF 413
Query: 143 VKAGQLDNACQLFDIMPGKGC----VSYTTMI-----KGLVQNDCFGEALEVFKDMMSDS 193
G D A +L+D M G V++ ++ GLV+ C +F+ M+ D
Sbjct: 414 GVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCM-----IFESMVKDY 468
Query: 194 VVP 196
+P
Sbjct: 469 RIP 471
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 35/280 (12%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R + +P L+ W + + ++ C +N + +VS L +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE----ENLKPSFITIVSVLPA 245
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
S++ S G++IH A++ GF S I +L++MYAKCGS
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS------------------- 286
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
L+ A QLFD M + VS+ +MI VQN+ EA+ +F+ M+ + V
Sbjct: 287 ------------LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
P D+++M + AC+ G++ R IH L+++L +D V V +L+ YC C V A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 256 FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
F K+ R LV+ N M+ G+++ G A F ++ + V
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 32/247 (12%)
Query: 44 QDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFI 103
++P+ + IF + +++++ AL +C+ + +GR IH L+++LG N +
Sbjct: 316 ENPKEAMLIF-QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 104 QNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC 163
NSLI+MY KC ++D A +F + +
Sbjct: 375 VNSLISMYCKCK-------------------------------EVDTAASMFGKLQSRTL 403
Query: 164 VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHAL 223
VS+ MI G QN +AL F M S +V P+ T ++VI+A + + + IH +
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
++ +D V V+T L+ Y C + AR +FD M ER++ T N M++GY G A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 284 RELFERI 290
ELFE +
Sbjct: 524 LELFEEM 530
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK C + G++IH L +K GF + F L NMYAKC +++AR
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR----------- 190
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
++FD MP + VS+ T++ G QN ALE+ K M +
Sbjct: 191 --------------------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
++ P+ +T+++V+ A S I + IH A++ D LV +ST L+ Y C + A
Sbjct: 231 NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETA 290
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
R+LFD M ERN+V+ N M++ Y + A +F+++ D+ V
Sbjct: 291 RQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 40/245 (16%)
Query: 51 RIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINM 110
R + A +++PA AL+ L+ CSS+ + RQI L K G + F Q L+++
Sbjct: 28 RNYIPANVYEHPA----ALL--LERCSSLK---ELRQILPLVFKNGLYQEHFFQTKLVSL 78
Query: 111 YAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMI 170
+ + GS+ D A ++F+ + K V Y TM+
Sbjct: 79 FCRYGSV-------------------------------DEAARVFEPIDSKLNVLYHTML 107
Query: 171 KGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD 230
KG + +AL+ F M D V P ++ C E+ + IH L +K
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 231 GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ T L + Y C V EAR++FD+MPER+LV+ N ++ GYS+ G+ MA E+ + +
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 291 PDKDV 295
++++
Sbjct: 228 CEENL 232
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 113/204 (55%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G+ H A+K G +QNSL++MY CG++ A+ LF P D VS N +I+G V+
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVR 196
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
G + A +LFD MP K +S+ MI + + G ++ +F++M+ N+ TL+ +
Sbjct: 197 NGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLL 256
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
++AC R + R +HA I+ ++ V++ T L+ Y C VG ARR+FD + RN
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 265 VTCNVMLNGYSKTGLVDMARELFE 288
VT NVM+ + G + ELFE
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELFE 340
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 75/125 (60%)
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
+AL + D++ VP+ T +++IS + + + +M H AIK D ++ V +LM
Sbjct: 101 QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLM 160
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGT 300
H Y C + A++LF ++P+R++V+ N ++ G + G V A +LF+ +PDK++ISW
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 301 MIDSY 305
MI +Y
Sbjct: 221 MISAY 225
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 112/288 (38%), Gaps = 69/288 (23%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
E+P+ ++ W I A +P I +F + E LV L +C +
Sbjct: 209 EMPDKNIISW---NIMISAYLGANNPGVSISLFREMVRAGFQGN-ESTLVLLLNACGRSA 264
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
+GR +H+ ++ +S+ I +LI+MY KC + AR +F + + + V+ N+MI
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
+ G+ + +LF+ MI G+++ P+++T
Sbjct: 325 AHCLHGRPEGGLELFE-----------AMINGMLR--------------------PDEVT 353
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
+ V+ C+R G + + ++L + + N H +C
Sbjct: 354 FVGVLCGCARAGLVSQGQSYYSLMVD-----EFQIKPNFGHQWC---------------- 392
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV----ISWGTMIDS 304
M N YS G + A E + +PD+DV W ++ S
Sbjct: 393 ---------MANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSS 431
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 121/230 (52%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ L + + +C + R I+ ++ +T + +L+ MYA G + AR F+
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
V + M+SGY K G+LD+A +FD K V +TTMI V++D EAL V
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F++M + P+ +++ +VISAC+ G + + +H+ ++ + ++ L++ Y
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C G+ R +F+KMP RN+V+ + M+N S G A LF R+ ++V
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 31/242 (12%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ + + LK+ S +S+ +G ++H +A K+ + F++ ++MYA CG I+ AR +F
Sbjct: 111 QFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFD 170
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D V+ N MI Y + G +D EA ++
Sbjct: 171 EMSHRDVVTWNTMIERYCRFGLVD-------------------------------EAFKL 199
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F++M +V+P+++ L N++SAC R G + R I+ I+ V + T L+ Y
Sbjct: 200 FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAG 259
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
+ AR F KM RNL M++GYSK G +D A+ +F++ KD++ W TMI +Y
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 306 TQ 307
+
Sbjct: 320 VE 321
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 197 NDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLF 256
+ + + ++ A S+ ++ +H +A K+A V T M Y C + AR +F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 257 DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
D+M R++VT N M+ Y + GLVD A +LFE + D +V+
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 56/264 (21%)
Query: 46 PQHCIRIF----CNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNT 101
PQ +R+F C+ + +++ S + +C+++ + + +HS G S
Sbjct: 325 PQEALRVFEEMCCSGIKPD-----VVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 102 FIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK 161
I N+LINMYAK G LD +F+ MP +
Sbjct: 380 SINNALINMYAK-------------------------------CGGLDATRDVFEKMPRR 408
Query: 162 GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIH 221
VS+++MI L + +AL +F M ++V PN++T + V+ CS G + + I
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 222 ALAIKLAVDGLVLVSTNLMHAYCLCSGVG------EARRLFDKMP-ERNLVTCNVMLNGY 274
A ++ ++ L H C+ G EA + + MP N+V +++
Sbjct: 469 A-----SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC 523
Query: 275 SKTGLVDM----ARELFERIPDKD 294
G +++ A+ + E PD D
Sbjct: 524 RIHGELELGKFAAKRILELEPDHD 547
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 136/251 (54%), Gaps = 7/251 (2%)
Query: 52 IFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMY 111
+F R+ + ++ V+A+ +C+S+ + GRQ+H L +K F T + +LI+MY
Sbjct: 217 VFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMY 276
Query: 112 AKCGSISDARLLFQACP-VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSY 166
+KC A ++F + +S N +ISG + GQ + A +LF+ + +G ++
Sbjct: 277 SKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATW 336
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
++I G Q EA + F+ M+S +VP+ L +++SACS + N + IH IK
Sbjct: 337 NSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIK 396
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM-PE-RNLVTCNVMLNGYSKTGLVDMAR 284
A + + V T+L+ Y C ARR+FD+ P+ ++ V NVM++GY K G + A
Sbjct: 397 AAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAI 456
Query: 285 ELFERIPDKDV 295
E+FE + ++ V
Sbjct: 457 EIFELLREEKV 467
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 39/266 (14%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+ R+F +AR + + + S L C I G Q+H LA+K GF ++ S
Sbjct: 114 RDAFRMFGDARVSGSGMNS-VTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTS 169
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
L++MY++CG A +F+ P V+ N ISG ++ G ++ +F++M
Sbjct: 170 LVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM-------- 221
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
+ S+ PND+T +N I+AC+ + R +H L +K
Sbjct: 222 --------------------RKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE-RNLVTCNVMLNGYSKTGLVDMARE 285
+V T L+ Y C A +F ++ + RNL++ N +++G G + A E
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 286 LFERIPDK----DVISWGTMIDSYTQ 307
LFE++ + D +W ++I ++Q
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQ 345
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LKSC+ + QGR +H+ +K GF + F +L++MY
Sbjct: 38 LKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMY--------------------- 76
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+K Q+ +A ++ D MP +G S + GL++N +A +F D
Sbjct: 77 ----------MKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVS 126
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
N +T+ +V+ C G+I +H LA+K + V V T+L+ Y C A
Sbjct: 127 GSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLA 183
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
R+F+K+P +++VT N ++G + G++++ +F
Sbjct: 184 ARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF 218
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
PN T ++ +C++ G++ R++HA +K V +T L+ Y V +A ++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 256 FDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
D+MPER + + N ++G + G A +F
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMF 120
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 110/193 (56%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKA 145
R+IH+ LKLGF S+ + ++ +Y K G + +A+ +F P D V+ +MI+ Y +
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 146 GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
G + A +LF + K V +T MI GLV+N +ALE+F++M ++V N+ T + V+
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
SACS G + R +H+ ++ V L++ Y C + EARR+F M +++++
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 266 TCNVMLNGYSKTG 278
+ N M++G + G
Sbjct: 323 SYNTMISGLAMHG 335
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 40/237 (16%)
Query: 68 ALVSALKSCSSISS-PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L+S L+SC +I+ PS IH+ ++ + F+ LI +
Sbjct: 31 TLISVLRSCKNIAHVPS----IHAKIIRTFHDQDAFVVFELI----------------RV 70
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
C LD V D A +F + YT MI G V + + + ++
Sbjct: 71 CSTLDSV---------------DYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLY 115
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M+ +SV+P++ + +V+ AC ++ CR IHA +KL V +M Y
Sbjct: 116 HRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKS 171
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMID 303
+ A+++FD+MP+R+ V VM+N YS+ G + A ELF+ + KD + W MID
Sbjct: 172 GELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMID 228
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 55/258 (21%)
Query: 58 QHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSI 117
Q +N + E V L +CS + + GR +HS + F+ N+LINMY++CG I
Sbjct: 247 QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
Query: 118 SDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQND 177
++ A ++F +M K +SY TMI GL +
Sbjct: 307 NE-------------------------------ARRVFRVMRDKDVISYNTMISGLAMHG 335
Query: 178 CFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFG------EIWNCRMIHALAIKLAVDG 231
EA+ F+DM++ PN +TL+ +++ACS G E++N ++
Sbjct: 336 ASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN-----------SMKR 384
Query: 232 LVLVSTNLMHAYCLCSGVG------EARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMAR 284
+ V + H C+ +G EA R + +P E + + +L+ G +++
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 285 ELFERIPDKDVISWGTMI 302
++ +R+ + + GT +
Sbjct: 445 KIAKRLFESENPDSGTYV 462
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 32/226 (14%)
Query: 63 AECELALVSALKSCSSISSPSQGRQIHSLALKLG-FHSNTFIQNSLINMYAKCGSISDAR 121
A E+ +VS LK+ + GR +H L L+ G + FI +SL++MY KC
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC------- 253
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
SC D+A ++FD MP + V++T +I G VQ+ CF +
Sbjct: 254 ------------SC------------YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDK 289
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
+ VF++M+ V PN+ TL +V+SAC+ G + R +H IK +++ T L+
Sbjct: 290 GMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLID 349
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
Y C + EA +F+++ E+N+ T M+NG++ G A +LF
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLF 395
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
DP N +ISGY +G D A +LFD K V++T MI G V+N EA+ F +M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCLCSGV 249
V N++T+++V+ A + ++ R +H L ++ V V + ++L+ Y CS
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+A+++FD+MP RN+VT ++ GY ++ D +FE + DV
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 76/250 (30%)
Query: 63 AECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARL 122
A E L S L +C+ + + +GR++H +K NT +LI++Y KCG
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC------ 356
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
L+ A +F+ + K ++T MI G + +A
Sbjct: 357 -------------------------LEEAILVFERLHEKNVYTWTAMINGFAAHGYARDA 391
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
++F M+S V PN++T M V+SAC+ G
Sbjct: 392 FDLFYTMLSSHVSPNEVTFMAVLSACAHGGL----------------------------- 422
Query: 243 YCLCSGVGEARRLFDKM-------PERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKD 294
V E RRLF M P+ + C M++ + + GL++ A+ L ER+P +
Sbjct: 423 ------VEEGRRLFLSMKGRFNMEPKADHYAC--MVDLFGRKGLLEEAKALIERMPMEPT 474
Query: 295 VISWGTMIDS 304
+ WG + S
Sbjct: 475 NVVWGALFGS 484
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 122/236 (51%), Gaps = 2/236 (0%)
Query: 57 RQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS 116
R +P L LV L +CS + +++H + + ++N+L+N YA CG
Sbjct: 229 RNLVSPTSVTLLLV--LSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
+ A +F++ D +S ++ GYV+ G L A FD MP + +S+T MI G ++
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
CF E+LE+F++M S ++P++ T+++V++AC+ G + I K + V+V
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
L+ Y C +A+++F M +R+ T M+ G + G A ++F ++ D
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 38/291 (13%)
Query: 17 SLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNA-RQHQNPAECELA-LVSALK 74
L +++P P ++ W IK S + +R++ N ++ P L++ LK
Sbjct: 89 KLFVKIPEPDVVVW---NNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK 145
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
+ + G+++H +K G SN ++QN+L+ MY+ CG + AR
Sbjct: 146 RDGG--ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMAR------------- 190
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
G D C+ + S+ MI G + + E++E+ +M + V
Sbjct: 191 -----------GVFDRRCK-------EDVFSWNLMISGYNRMKEYEESIELLVEMERNLV 232
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P +TL+ V+SACS+ + C+ +H + + + + L++AY C + A R
Sbjct: 233 SPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR 292
Query: 255 LFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
+F M R++++ ++ GY + G + +AR F+++P +D ISW MID Y
Sbjct: 293 IFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGY 343
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
G + A +LF +P V + MIKG + DC GE + ++ +M+ + V P+ T +
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
++ R DG L +H + + G+G NL
Sbjct: 141 LNGLKR-------------------DGGALACGKKLHCHVVKFGLGS-----------NL 170
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
N ++ YS GL+DMAR +F+R +DV SW MI Y +
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 72/243 (29%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E +VS L +C+ + S G I + K ++ + N+LI+MY KCG
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG---------- 417
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
C+ + A ++F M + ++T M+ GL N EA++V
Sbjct: 418 ---------CS------------EKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKV 456
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F M S+ P+D+T + V+SAC+ G
Sbjct: 457 FFQMQDMSIQPDDITYLGVLSACNHSGM-------------------------------- 484
Query: 246 CSGVGEARRLFDKMP-----ERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISWG 299
V +AR+ F KM E +LV M++ + GLV A E+ ++P + + I WG
Sbjct: 485 ---VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWG 541
Query: 300 TMI 302
++
Sbjct: 542 ALL 544
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 31/242 (12%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + LKSC I RQ+H +K G+ N ++ S++++Y KC +SDAR +F
Sbjct: 162 ETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
VS N+++ Y++ G D EA+ +
Sbjct: 222 EIVNPSDVSWNVIVRRYLEMGFND-------------------------------EAVVM 250
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F M+ +V P + T+ +V+ ACSR + ++IHA+A+KL+V +VST++ Y
Sbjct: 251 FFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVK 310
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
C + ARR+FD+ ++L + ++GY+ +GL ARELF+ +P+++++SW M+ Y
Sbjct: 311 CDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGY 370
Query: 306 TQ 307
Sbjct: 371 VH 372
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S + +CS + G+ IH++A+KL ++T + S+ +MY KC + AR +F
Sbjct: 268 SVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK 327
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D S +SGY +G A +LFD+MP + VS+ M+ G V + EAL+ M
Sbjct: 328 DLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ +++TL+ +++ CS ++ + H + D V+V+ L+ Y C +
Sbjct: 388 QEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQ 447
Query: 251 EARRLFDKMPE-RNLVTCNVMLNGYSKTGLVDMARELFE 288
A F +M E R+ V+ N +L G ++ G + A FE
Sbjct: 448 SANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE 486
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-Q 125
+ LV L CS IS G+Q H + G+ +N + N+L++MY KCG++ A + F Q
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ D VS N +++G + G+ + A F E ++V
Sbjct: 456 MSELRDEVSWNALLTGVARVGRSEQALSFF-------------------------EGMQV 490
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
P+ TL +++ C+ + + IH I+ V++ ++ Y
Sbjct: 491 -------EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSK 543
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C A +F + R+L+ N ++ G + G ELF + ++ V
Sbjct: 544 CRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGV 593
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+SCSS + Q R++ S + F+ N I Y KCG +
Sbjct: 68 FRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCV--------------- 112
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
D+A +LF+ MP + S+ +I QN E +F+ M D
Sbjct: 113 ----------------DDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V + + V+ +C ++ R +H +K G V + T+++ Y C + +A
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
RR+FD++ + V+ NV++ Y + G D A +F ++ + +V
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV 259
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 33/168 (19%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+ + F + P++ LA + L C++I + + G+ IH ++ G+ + I+ +
Sbjct: 479 EQALSFFEGMQVEAKPSKYTLA--TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGA 536
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
+++MY+KC C D A ++F + + +
Sbjct: 537 MVDMYSKC-------------------RC------------FDYAIEVFKEAATRDLILW 565
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI 214
++I+G +N E E+F + ++ V P+ +T + ++ AC R G +
Sbjct: 566 NSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHV 613
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 5/226 (2%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E S LKSCS+ S G+ IH+ LK G + ++ L+++YAK G + A+ +F
Sbjct: 130 EFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFD 185
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
P VS MI+ Y K G ++ A LFD M + VS+ MI G Q+ +AL +
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALML 245
Query: 186 FKDMMSDSV-VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
F+ ++++ P+++T++ +SACS+ G + R IH + V V T L+ Y
Sbjct: 246 FQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYS 305
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C + EA +F+ P +++V N M+ GY+ G A LF +
Sbjct: 306 KCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
Y G++ ++ LF +T I N +A ++ ++S + PN+ T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
+++ +CS + ++IH +K + V+T L+ Y V A+++FD+MP
Sbjct: 133 FSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
ER+LV+ M+ Y+K G V+ AR LF+ + ++D++SW MID Y Q
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ 235
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 40/229 (17%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
P + +F P E+ +V+AL +CS I + GR IH N +
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
LI+MY+KCGS+ +A L+F P D V+ N MI+GY G +A +LF+ M G
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQG----- 353
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI-WNCRMIHALA 224
I GL P D+T + + AC+ G + R+ ++
Sbjct: 354 ----ITGL---------------------QPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEA---RRLFDKMPERNLVTCNVM 270
+ + + H CL S +G A +R ++ + N+ +V+
Sbjct: 389 QEYG------IKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVL 431
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 8/202 (3%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
NS+++ Y G +AR LF + VS N ++SGY+K + A +F++MP + V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
S+T M+KG +Q GEA +F M + V + +I G I R ++ +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD----GRIDKARKLYDM- 166
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
+ V +V STN++ C V EAR +FD+M ERN+VT M+ GY + VD+AR
Sbjct: 167 --MPVKDVV-ASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 285 ELFERIPDKDVISWGTMIDSYT 306
+LFE +P+K +SW +M+ YT
Sbjct: 224 KLFEVMPEKTEVSWTSMLLGYT 245
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
S++ Y G I DA F+ P+ ++CN MI G+ + G++ A ++FD+M +
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
++ MIK + EAL++F M V P+ +L++++S C+ + R +HA
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
++ D V V++ LM Y C + +A+ +FD+ ++++ N +++GY+ GL + A
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 285 ELFERIPDKDVISWGTMIDSYT 306
++F +P S GTM + T
Sbjct: 418 KIFHEMP-----SSGTMPNKVT 434
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 8/208 (3%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
N +++ Y + G + +A LF P + VS +M G + G++D A +L+D+MP
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
K V+ T MI GL + EA +F +M +VV T +I+ + + R
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV----TWTTMITGYRQNNRVDVARK 224
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
+ ++ + + T+++ Y L + +A F+ MP + ++ CN M+ G+ + G
Sbjct: 225 L----FEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGE 280
Query: 280 VDMARELFERIPDKDVISWGTMIDSYTQ 307
+ AR +F+ + D+D +W MI +Y +
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYER 308
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 62/238 (26%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
+L+S L C++++S GRQ+H+ ++ F + ++ + L+ MY KCG + A+L+F
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
D + N +ISGY G + A ++F MP G
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG------------------------- 427
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
+PN +TL+ +++ACS G ++ L I +++ V+ + H C
Sbjct: 428 ------TMPNKVTLIAILTACSYAG-----KLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK-DVISWGTMIDS 304
+G A G VD A EL E + K D WG ++ +
Sbjct: 477 MLGRA-------------------------GQVDKAMELIESMTIKPDATVWGALLGA 509
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 205 ISACSRFGEIWNCR-MIHALAIKLAVDGLVLVSTNLMHAYCLCSGV-GEARRLFDKMPER 262
IS SR G+I R +L K + S N + + +G+ EAR+LFD+M ER
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFK------AIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 263 NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
N+V+ N +++GY K ++ AR +FE +P+++V+SW M+ Y Q
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQ 122
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G++ H+ L G + F++ SL+NMY+ CG + A+ +F D + N +++ Y K
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM-----SDSVVPNDL 199
AG +D+A +LFD MP + +S++ +I G V + EAL++F++M V PN+
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 200 TLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM 259
T+ V+SAC R G + + +HA K V+ +++ T L+ Y C + A+R+F+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 260 -PERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
++++ + M+ + GL D +LF + D I+
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%)
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLV 280
HA + +D V T+L++ Y C + A+R+FD ++L N ++N Y+K GL+
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 281 DMARELFERIPDKDVISWGTMIDSYT 306
D AR+LF+ +P+++VISW +I+ Y
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYV 170
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 72/244 (29%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + + L +C + + QG+ +H+ K + + +LI+MYAKCGS+ A+ +F
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
A + K +Y+ MI L E ++
Sbjct: 259 A------------------------------LGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 186 FKDM-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
F +M SD++ PN +T + ++ AC G I
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLI------------------------------ 318
Query: 245 LCSGVGEARRLFDKMPERNLVTCNV-----MLNGYSKTGLVDMARELFERIP-DKDVISW 298
E + F M E +T ++ M++ Y ++GL+ A +P + DV+ W
Sbjct: 319 -----NEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 299 GTMI 302
G+++
Sbjct: 374 GSLL 377
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 39/259 (15%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LK+ ++ G+ IH L LK + S+ FI +SLI+MY+K G + +AR +F
Sbjct: 122 SLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ 181
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKG---------------------------- 162
D V N MISGY Q D A L M G
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 163 -----------CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF 211
VS+T++I GLV N +A + FK M++ + PN T++ ++ AC+
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 212 GEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVML 271
+ + + IH ++ ++ V + L+ Y C + EA LF K P++ VT N M+
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Query: 272 NGYSKTGLVDMARELFERI 290
Y+ GL D A ELF+++
Sbjct: 362 FCYANHGLADKAVELFDQM 380
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+GR +H+ + G T I L+ Y +CG + DAR +F P D C +MI
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMI---- 89
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
AC +N + E+L+ F++M D + + + +
Sbjct: 90 ------GAC---------------------ARNGYYQESLDFFREMYKDGLKLDAFIVPS 122
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
++ A + +MIH L +K + + + ++L+ Y VG AR++F + E++
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQD 182
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIP----DKDVISWGTMIDSYTQ 307
LV N M++GY+ D A L + + DVI+W +I ++
Sbjct: 183 LVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+++ L +C++++ G++IH ++ G + F++++L++MY KCG IS+A +LF+ P
Sbjct: 291 IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
V+ N MI Y G D A +LFD M G
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATG 384
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 56 ARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCG 115
R + PA L+ CS + +G+++H GF I N L+ MYAKCG
Sbjct: 78 GRAKKPPASTYCNLIQV---CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 116 SISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQ 175
S+ DAR +F P D S N+M++GY + G L+ A +LFD M K S+T M+ G V+
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 176 NDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC----RMIHALAIKLAVDG 231
D EAL ++ M VPN + +S C + IH ++ +D
Sbjct: 195 KDQPEEALVLYSLMQR---VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDS 251
Query: 232 LVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
++ ++LM Y C + EAR +FDK+ E+++V+ M++ Y K+ LF +
Sbjct: 252 DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 169 MIKGLVQNDCFGEALEVF--KDMMSDSV-------VPNDLTLMNVISACSRFGEIWNCRM 219
+++ L + + FGEA++V + ++ ++V P T N+I CS+ + +
Sbjct: 47 VVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKK 106
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
+H +++ L+ Y C + +AR++FD+MP R+L + NVM+NGY++ GL
Sbjct: 107 VHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGL 166
Query: 280 VDMARELFERIPDKDVISWGTMIDSYTQ 307
++ AR+LF+ + +KD SW M+ Y +
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 29/244 (11%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E L +C+ +++ G+Q+H ++GF +F +SL++MY KCG+I A+ +
Sbjct: 319 EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD 378
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGE 181
CP D VS +I G + GQ D A + FD++ G V++ ++ +
Sbjct: 379 GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 182 ALEVFKDMMSD---SVVPNDLT-LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST 237
LE F + S + T L+++++ RF + +K + + + +
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ-----------LKSVISEMPMKPS 487
Query: 238 NLMHAYCL--CSGVGE-------ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ A L CS G A+ LF PE N VT M N Y+ G + ++ +
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE-NPVTYVTMANIYAAAGKWEEEGKMRK 546
Query: 289 RIPD 292
R+ +
Sbjct: 547 RMQE 550
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+G++IH ++ G S+ + +SL++MY KCG I +AR +F D VS MI Y
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
K+ + + E +F +++ PN+ T
Sbjct: 296 KSSR-------------------------------WREGFSLFSELVGSCERPNEYTFAG 324
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
V++AC+ + +H ++ D S++L+ Y C + A+ + D P+ +
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 264 LVTCNVMLNGYSKTGLVDMARELFE 288
LV+ ++ G ++ G D A + F+
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFD 409
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 33/221 (14%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKA 145
R +HS + GF S++F +LI YAK G++ AR +F D N MI+GY +
Sbjct: 102 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRR 161
Query: 146 GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD-SVVPNDLTLMNV 204
G + A +LFD MP K S+TT+I G QN + EAL++F M D SV PN +T+++V
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+ AC+ GE+ R + G FD N+
Sbjct: 222 LPACANLGELEIGRRL--------------------------EGYARENGFFD-----NI 250
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPD-KDVISWGTMIDS 304
CN + YSK G++D+A+ LFE + + +++ SW +MI S
Sbjct: 251 YVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGS 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 151 ACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSR 210
A +LFD Y +I+ + E++ ++ + D + P+ T + +A +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 211 FGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVM 270
F R++H+ + + T L+ AY + ARR+FD+M +R++ N M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 271 LNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ GY + G + A ELF+ +P K+V SW T+I ++Q
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQ 191
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 45/270 (16%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+P + W I S + +++F + ++ + +VS L +C+++
Sbjct: 174 MPRKNVTSWTTV---ISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGE 230
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
GR++ A + GF N ++ N+ I MY+KCG I A+ LF+
Sbjct: 231 LEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE---------------- 274
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
+ G N C S+ +MI L + EAL +F M+ + P+ +T
Sbjct: 275 --ELGNQRNLC------------SWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 320
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG------EARRL 255
+ ++ AC G + + + +++ + +S L H C+ +G EA L
Sbjct: 321 VGLLLACVHGGMV-----VKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 375
Query: 256 FDKMPER-NLVTCNVMLNGYSKTGLVDMAR 284
MP + + V +L S G V++A
Sbjct: 376 IKTMPMKPDAVVWGTLLGACSFHGNVEIAE 405
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 120/220 (54%), Gaps = 2/220 (0%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS-ISDARLLFQACPVLD 131
LKS +SS +H+ K GFH +Q +L++ YA S I+ AR LF +
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
VS M+SGY ++G + NA LF+ MP + S+ ++ QN F EA+ +F+ M++
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 192 D-SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ S+ PN++T++ V+SAC++ G + + IHA A + + V VS +L+ Y C +
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLE 312
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
EA +F +++L N M+N ++ G + A +FE +
Sbjct: 313 EASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Query: 182 ALEVFKDMMSDSV-VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
A F+ M++ SV PN V+ + ++ ++H K V+V T L+
Sbjct: 109 AFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALL 168
Query: 241 HAYCL-CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWG 299
H+Y S + AR+LFD+M ERN+V+ ML+GY+++G + A LFE +P++DV SW
Sbjct: 169 HSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWN 228
Query: 300 TMIDSYTQ 307
++ + TQ
Sbjct: 229 AILAACTQ 236
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 40/199 (20%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ +V L +C+ + + IH+ A + S+ F+ NSL+++Y KCG+
Sbjct: 260 EVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN--------- 310
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
L+ A +F + K ++ +MI + EA+ V
Sbjct: 311 ----------------------LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAV 348
Query: 186 FKDMMS---DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
F++MM + + P+ +T + +++AC+ G + R L + + + H
Sbjct: 349 FEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDL-----MTNRFGIEPRIEHY 403
Query: 243 YCLCSGVGEARRLFDKMPE 261
CL +G A R FD+ E
Sbjct: 404 GCLIDLLGRAGR-FDEALE 421
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 4/229 (1%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + + S ++ G+Q+H ALK+G SN F+ ++++N Y K +++DAR F
Sbjct: 93 EFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD 152
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ VS +ISGY+K + + A LF MP + V++ +I G Q EA+
Sbjct: 153 DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 186 FKDMMSDSVV-PNDLTLMNVISACSRFGEIWNCRMIHALAIK-LAVDGLVLVSTNLMHAY 243
F DM+ + VV PN+ T I+A S + IHA AIK L V V +L+ Y
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 244 CLCSGVGEARRLFDKMPE--RNLVTCNVMLNGYSKTGLVDMARELFERI 290
C + ++ F+K+ E RN+V+ N M+ GY+ G + A +FE++
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%)
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
++ + + NA ++FD +P +S T +I V+ EA + FK ++ + PN+ T
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
VI + + ++ + +H A+K+ + V V + +++ Y S + +ARR FD +
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
N+V+ +++GY K + A LF +P++ V++W +I ++Q
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQ 202
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 49/317 (15%)
Query: 4 LISASFRFRIVHRSLSL--ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQN 61
LIS + +LSL +P +++ W I S + + F + +
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTW---NAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALK-LGFHSNTFIQNSLINMYAKCGSISDA 120
E A+ + S+I+S G+ IH+ A+K LG N F+ NSLI+ Y+KCG++ D+
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
L F L+ NI VS+ +MI G N
Sbjct: 282 LLAFNK---LEEEQRNI--------------------------VSWNSMIWGYAHNGRGE 312
Query: 181 EALEVFKDMMSDS-VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNL 239
EA+ +F+ M+ D+ + PN++T++ V+ AC+ G I M A+ D +L L
Sbjct: 313 EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLL---EL 369
Query: 240 MHAYCLC-----SG-VGEARRLFDKMP-ERNLVTCNVMLNG---YSKTGLVDMARELFER 289
H C+ SG EA L MP + + +L G +S L +A
Sbjct: 370 EHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILE 429
Query: 290 IPDKDVISWGTMIDSYT 306
+ +DV S+ + ++Y+
Sbjct: 430 LDPRDVSSYVMLSNAYS 446
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 33/256 (12%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S +K+ S S + Q H GFH IQ +LI+ Y+ G I +AR +F P
Sbjct: 876 SLVKASSFASRFGESLQAHIWKFGFGFHVK--IQTTLIDFYSATGRIREARKVFDEMPER 933
Query: 131 DPVSCNIMIS-------------------------------GYVKAGQLDNACQLFDIMP 159
D ++ M+S GY+ G L+ A LF+ MP
Sbjct: 934 DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMP 993
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
K +S+TTMIKG QN + EA+ VF MM + ++P+++T+ VISAC+ G + +
Sbjct: 994 VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKE 1053
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
+H ++ V + + L+ Y C + A +F +P++NL N ++ G + G
Sbjct: 1054 VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGF 1113
Query: 280 VDMARELFERIPDKDV 295
A ++F ++ + V
Sbjct: 1114 AQEALKMFAKMEMESV 1129
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
N I+ +LD A M Y + KG V +LE++ M+ DSV
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 196 PNDLTLMNVISA---CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
P+ T +++ A SRFGE + A K V + T L+ Y + EA
Sbjct: 869 PSSYTYSSLVKASSFASRFGE-----SLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREA 923
Query: 253 RRLFDKMPER-------------------------------NLVTCNVMLNGYSKTGLVD 281
R++FD+MPER N T N ++NGY G ++
Sbjct: 924 RKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLE 983
Query: 282 MARELFERIPDKDVISWGTMIDSYTQ 307
A LF ++P KD+ISW TMI Y+Q
Sbjct: 984 QAESLFNQMPVKDIISWTTMIKGYSQ 1009
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 76/294 (25%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
SL ++P ++ W IK S + + I +F + + E+ + + + +
Sbjct: 986 ESLFNQMPVKDIISWTTM---IKGYSQNKRYREAIAVFYKMME-EGIIPDEVTMSTVISA 1041
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
C+ + G+++H L+ GF + +I ++L++MY+KCGS
Sbjct: 1042 CAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS------------------- 1082
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
L+ A +F +P K + ++I+GL + EAL++F M +SV
Sbjct: 1083 ------------LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
PN +T ++V +AC+ HA GL V E RR+
Sbjct: 1131 PNAVTFVSVFTACT-----------HA--------GL----------------VDEGRRI 1155
Query: 256 FDKMPERNLVTCNV-----MLNGYSKTGLVDMARELFERIP-DKDVISWGTMID 303
+ M + + NV M++ +SK GL+ A EL + + + + WG ++D
Sbjct: 1156 YRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 1209
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 10/204 (4%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
NS++ Y DAR LF P + +S N ++SGY+K G++D A ++FD+MP + V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN-CRMIHAL 223
S+T ++KG V N A +F M + V + L+ + G I + C++ +
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD----GRIDDACKLYEMI 167
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
D + T+++H C V EAR +FD+M ER+++T M+ GY + VD A
Sbjct: 168 P-----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDA 222
Query: 284 RELFERIPDKDVISWGTMIDSYTQ 307
R++F+ +P+K +SW +M+ Y Q
Sbjct: 223 RKIFDVMPEKTEVSWTSMLMGYVQ 246
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 105/187 (56%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
S++ Y + G I DA LF+ PV ++CN MISG + G++ A ++FD M +
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
S+ T+IK +N EAL++F M V P TL++++S C+ + + + +HA
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
++ D V V++ LM Y C + +++ +FD+ P ++++ N +++GY+ GL + A
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 285 ELFERIP 291
++F +P
Sbjct: 418 KVFCEMP 424
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
N +L+ Y G + A LF P + VS +M+ G+++ G++D+AC+L++++P
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP 168
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
K ++ T+MI GL + EA E+F +M SV+ T +++ + + + R
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARK 224
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
I + + + T+++ Y + +A LF+ MP + ++ CN M++G + G
Sbjct: 225 I----FDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGE 280
Query: 280 VDMARELFERIPDKDVISWGTMI 302
+ AR +F+ + +++ SW T+I
Sbjct: 281 IAKARRVFDSMKERNDASWQTVI 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 35/192 (18%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L+S L C+S++S G+Q+H+ ++ F + ++ + L+ MY KCG + ++L+F
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
P D + N +ISGY G + A ++F MP
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMP---------------------------- 424
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
+S S PN++T + +SACS G + L I +++ + V H C+
Sbjct: 425 --LSGSTKPNEVTFVATLSACSYAGMV-----EEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 248 GVGEARRLFDKM 259
+G A R + M
Sbjct: 478 MLGRAGRFNEAM 489
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 50/312 (16%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQD------PQHCIRIFCNARQHQNPAECELALVSALK 74
E+P+P ++ W Q+ H +F N E + +AL
Sbjct: 115 EMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPN----------EFSFTAALA 164
Query: 75 SCSSISSPSQGRQIHSLALKLGFH-SNTFIQNSLINMYAKCGSISDARLLFQ-------- 125
+C+ + G IHS +KLG N + N LI+MY KCG + DA L+FQ
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 126 -------AC----------------PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
+C P D V+ N +I +VK+G +NA Q+ MP
Sbjct: 225 SWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPN 284
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL-MNVISACSRFGEIWNCRMIH 221
S+ T++ G V ++ GEA E F M S V ++ +L + + + + W +IH
Sbjct: 285 SSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGS-LIH 343
Query: 222 ALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVD 281
A A KL +D V+V++ L+ Y C + A +F MP +NL+ N M++GY++ G
Sbjct: 344 ACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSI 403
Query: 282 MARELFERIPDK 293
A +LF ++ +
Sbjct: 404 EAIKLFNQLKQE 415
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 32/240 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
LV L+ + S RQ+H K GF SNT + NSL+ Y S+ DA +F P
Sbjct: 58 LVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP 117
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
D +S N ++SGYV++G+ F E + +F +
Sbjct: 118 DPDVISWNSLVSGYVQSGR-------------------------------FQEGICLFLE 146
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD-GLVLVSTNLMHAYCLCS 247
+ V PN+ + ++AC+R IH+ +KL ++ G V+V L+ Y C
Sbjct: 147 LHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCG 206
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ +A +F M E++ V+ N ++ S+ G +++ F ++P+ D +++ +ID++ +
Sbjct: 207 FMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVK 266
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
S++T++ L + G L ++++D P+ L++++ +G + CR +H
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
K +S +LM Y + +A ++FD+MP+ ++++ N +++GY ++G
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 285 ELFERIPDKDVI 296
LF + DV
Sbjct: 142 CLFLELHRSDVF 153
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 128/242 (52%), Gaps = 8/242 (3%)
Query: 50 IRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLIN 109
++++CN+ + ++ LA + L+ S ++ R++ + +K GF ++T N ++
Sbjct: 1 MKLYCNSNEVRSRT---LATLRQLRQPSP-ATFLDTRRVDARIIKTGFDTDTCRSNFIVE 56
Query: 110 MYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTM 169
+ G +S AR ++ P + VS N MISG+VK G + +A LFD MP + V++T +
Sbjct: 57 DLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTIL 116
Query: 170 IKGLVQNDCFGEALEVFKDMMSDS--VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL 227
+ +N F EA ++F+ M S +P+ +T ++ C+ +HA A+KL
Sbjct: 117 MGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKL 176
Query: 228 AVDG--LVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
D + VS L+ +YC + A LF+++PE++ VT N ++ GY K GL +
Sbjct: 177 GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIH 236
Query: 286 LF 287
LF
Sbjct: 237 LF 238
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 35/291 (12%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R L +P+ T++ W S + R C + P + + L
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH--VTFTTLLPG 156
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
C+ + Q+H+ A+KLGF +N F+ S
Sbjct: 157 CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS----------------------------- 187
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
N+++ Y + +LD AC LF+ +P K V++ T+I G ++ + E++ +F M
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
P+D T V+ A + + +HAL++ V ++ Y V E R L
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 256 FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP----DKDVISWGTMI 302
FD+MPE + V+ NV+++ YS+ + + F + D+ + TM+
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+ L +++SS GRQ+H AL S + NSL++MYAKC +A L+F++
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS-- 411
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
+P + VS+T +I G VQ G L++F
Sbjct: 412 -----------------------------LPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M ++ + T V+ A + F + + +HA I+ V + L+ Y C
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 502
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ +A ++F++MP+RN V+ N +++ ++ G + A F ++
Sbjct: 503 IKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 50 IRIFCNARQ--HQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSL 107
I +F RQ HQ P++ + V LK+ + + G+Q+H+L++ GF + + N +
Sbjct: 235 IHLFLKMRQSGHQ-PSDFTFSGV--LKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI 291
Query: 108 INMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYT 167
++ Y+K + + R+LF P LD VS N++IS Y +A Q
Sbjct: 292 LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ-------------------- 331
Query: 168 TMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL 227
+ +L F++M + ++S + + R +H A+
Sbjct: 332 -----------YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 228 AVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
D ++ V +L+ Y C EA +F +P+R V+ +++GY + GL +LF
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 288 ERI 290
++
Sbjct: 441 TKM 443
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 57/298 (19%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHC--IRIFCNARQHQNPAECELALVSALKSCSSI 79
LP T + W +Q H +++F R A+ + + LK+ +S
Sbjct: 412 LPQRTTVSWTALIS-----GYVQKGLHGAGLKLFTKMRGSNLRAD-QSTFATVLKASASF 465
Query: 80 SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMI 139
+S G+Q+H+ ++ G N F + L++MYAKCGSI DA +F+ P + VS N +I
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 525
Query: 140 SGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE-ALEVFKDMMSDSVVPND 198
S + G GE A+ F M+ + P+
Sbjct: 526 SAHADNGD--------------------------------GEAAIGAFAKMIESGLQPDS 553
Query: 199 LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG------EA 252
++++ V++ACS G + A+ + ++ H C+ +G EA
Sbjct: 554 VSILGVLTACSHCGFVE-----QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 253 RRLFDKMP-ERNLVTCNVMLNG---YSKTGLVDMARE-LFERIPDKDVISWGTMIDSY 305
+L D+MP E + + + +LN + L + A E LF +D ++ +M + Y
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 216 NCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
+ R + A IK D S ++ V AR+++D+MP +N V+ N M++G+
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 276 KTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
KTG V AR+LF+ +PD+ V++W ++ Y +
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 132/263 (50%), Gaps = 4/263 (1%)
Query: 37 IKAPSLLQDPQ-HCIRIFCNARQHQNPAECE-LALVSALKSCSSISSPSQGRQIHSLALK 94
I+A SLL +P H I I + A+ + LK +S GRQIH +
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 95 LGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQL 154
GF S+ + LI MY CG + DAR +F V D N +++GY K G++D A L
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 155 FDIMP--GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
++MP + VS+T +I G ++ EA+EVF+ M+ ++V P+++TL+ V+SAC+ G
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 213 EIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLN 272
+ I + ++ V ++ ++ Y + +A +F+ + ERN+VT ++
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 273 GYSKTGLVDMARELFERIPDKDV 295
G + G A +F R+ V
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGV 347
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLV---QNDCFGEALEVFKDMMSDSVVPNDLTL 201
AG L A +F P + TMI+ L + + A+ V++ + + P+ T
Sbjct: 60 AGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTF 119
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
V+ R ++W R IH + D V V T L+ Y C G+G+AR++FD+M
Sbjct: 120 PFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLV 179
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIP--DKDVISWGTMIDSYTQ 307
+++ N +L GY K G +D AR L E +P ++ +SW +I Y +
Sbjct: 180 KDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAK 227
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 38/197 (19%)
Query: 60 QNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISD 119
+N E+ L++ L +C+ + S G +I S G + + N++I+MYAK
Sbjct: 244 ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK------ 297
Query: 120 ARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF 179
+G + A +F+ + + V++TT+I GL +
Sbjct: 298 -------------------------SGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI-WNCRMIHALAIKLAVDGLVLVSTN 238
EAL +F M+ V PND+T + ++SACS G + R+ +++ K + N
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG------IHPN 386
Query: 239 LMHAYCLCSGVGEARRL 255
+ H C+ +G A +L
Sbjct: 387 IEHYGCMIDLLGRAGKL 403
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 5/286 (1%)
Query: 10 RFRIVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELAL 69
+ I H+ E+P ++ W +D I +F Q N E +
Sbjct: 96 KIEITHKVFD-EMPQRDVVSWNGLISSYVGNGRFED---AIGVFKRMSQESNLKFDEGTI 151
Query: 70 VSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
VS L +CS++ + G +I+ + F + I N+L++M+ KCG + AR +F +
Sbjct: 152 VSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRD 210
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
+ M+ GYV G++D A LF+ P K V +T M+ G VQ + F EALE+F+ M
Sbjct: 211 KNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCM 270
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ + P++ L+++++ C++ G + + IH + V +V T L+ Y C +
Sbjct: 271 QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCI 330
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
A +F ++ ER+ + ++ G + G+ A +L+ + + V
Sbjct: 331 ETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGV 376
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 110/236 (46%), Gaps = 33/236 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LKS + +G ++H A+K G ++++ NSL+ MYA G I +F P D
Sbjct: 53 LKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDV 112
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS N +IS YV G+ F +A+ VFK M +
Sbjct: 113 VSWNGLISSYVGNGR-------------------------------FEDAIGVFKRMSQE 141
Query: 193 SVVPNDL-TLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
S + D T+++ +SACS + I+ + + V + L+ +C C + +
Sbjct: 142 SNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDK 200
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
AR +FD M ++N+ M+ GY TG +D AR LFER P KDV+ W M++ Y Q
Sbjct: 201 ARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQ 256
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
Y M+K L F + L +F ++ + P++ TL V+ + R ++ +H A+
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
K ++ VS +LM Y + ++FD+MP+R++V+ N +++ Y G + A
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 286 LFERIPDKDVISW--GTMIDS 304
+F+R+ + + + GT++ +
Sbjct: 134 VFKRMSQESNLKFDEGTIVST 154
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
LVS L C+ + QG+ IH + + + +L++MYAKCG I
Sbjct: 280 FVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCI--------- 330
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ A ++F + + S+T++I GL N G AL+++
Sbjct: 331 ----------------------ETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMI-HALAIKLAVDGLVLVSTNLMHAYCL 245
+M + V + +T + V++AC+ G + R I H++ + V + L+ C
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCR 428
Query: 246 CSGVGEARRLFDKM---PERNL--VTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ EA L DKM + L V C+ +L+ G V +A + E++ +V
Sbjct: 429 AGLLDEAEELIDKMRGESDETLVPVYCS-LLSAARNYGNVKIAERVAEKLEKVEV 482
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 2/218 (0%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C ++ + GRQ H+ +L ++ N++I+MY KC SI AR +F P D
Sbjct: 156 LKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDV 215
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+S +I+ Y + G ++ A +LF+ +P K V++T M+ G QN EALE F M
Sbjct: 216 ISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS 275
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNLMHAYCLCSGVG 250
+ +++T+ ISAC++ G +A K + V++ + L+ Y C V
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
EA +F M +N+ T + M+ G + G A LF
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFH 373
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISD--ARLLFQ 125
+L+S L C +++ Q +QIH L+ G + +I LI K G D AR + +
Sbjct: 51 SLISKLDDCINLN---QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+P +I GY G+ D EA+ +
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFD-------------------------------EAIAM 136
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ M + + P T ++ AC ++ R HA +L V V ++ Y
Sbjct: 137 YGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVK 196
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
C + AR++FD+MPER++++ ++ Y++ G ++ A ELFE +P KD+++W M+ +
Sbjct: 197 CESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGF 256
Query: 306 TQ 307
Q
Sbjct: 257 AQ 258
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNA-RQHQNPAECELALVSALKSCSSI 79
E+P ++ W I S + +F R P E A V L SC
Sbjct: 112 EMPEKNVVSWTAM---ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV--LTSCIRA 166
Query: 80 SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMI 139
S G+QIH L +K + S+ F+ +SL++MYAK
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK-------------------------- 200
Query: 140 SGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDL 199
AGQ+ A ++F+ +P + VS T +I G Q EALE+F + S+ + PN +
Sbjct: 201 -----AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYV 255
Query: 200 TLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM 259
T ++++A S + + + H ++ + ++ +L+ Y C + ARRLFD M
Sbjct: 256 TYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315
Query: 260 PERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
PER ++ N ML GYSK GL ELF + D+ +
Sbjct: 316 PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L +C + G+++H+ +K + T+++ L+ Y KC + DAR
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDAR----------- 107
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
++ D MP K VS+T MI Q EAL VF +MM
Sbjct: 108 --------------------KVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
PN+ T V+++C R + + IH L +K D + V ++L+ Y + EA
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 207
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
R +F+ +PER++V+C ++ GY++ GL + A E+F R+
Sbjct: 208 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ S L + S ++ G+Q H L+ +QNSLI+MY+KCG+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN---------- 304
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
L A +LFD MP + +S+ M+ G ++ E LE+F
Sbjct: 305 ---------------------LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343
Query: 187 KDMMSDS-VVPNDLTLMNVISACS 209
+ M + V P+ +TL+ V+S CS
Sbjct: 344 RLMRDEKRVKPDAVTLLAVLSGCS 367
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
AL+S C + S+ L ++ + I N++++ + K G ++ AR LF
Sbjct: 149 ALISGYIRCGELDLASK------LFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM 202
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
++ MI GY +D A +LFD MP + VS+ TMI G QN E + +F+
Sbjct: 203 THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 188 DMM-SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+M + S+ P+D+T+++V+ A S G + H + +D V V T ++ Y C
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKC 322
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF-----ERIPDK 293
+ +A+R+FD+MPE+ + + N M++GY+ G A +LF E PD+
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDE 374
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 106/240 (44%), Gaps = 40/240 (16%)
Query: 52 IFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMY 111
++ + R+ A + KSCS QG Q+HS + GF ++ ++ +++MY
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 112 AKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG-KGCVSYTTMI 170
AK G + AR F P VS +ISGY++ G+LD A +LFD MP K V Y M+
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMM 183
Query: 171 KGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD 230
G V++ A +F +M +V+ W
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHKTVI------------------TW--------------- 210
Query: 231 GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
T ++H YC + AR+LFD MPERNLV+ N M+ GY + LF+ +
Sbjct: 211 ------TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Query: 151 ACQLFDIMPGKG-CVSYTTMIKGLVQNDCFGEALEVFKDMMSDS-VVPNDLTLMNVISAC 208
A +LFD P + +MIK ++ + ++ +++D+ ++ P++ T + +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 209 SRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCN 268
S ++ +H+ + + VST ++ Y +G AR FD+MP R+ V+
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 269 VMLNGYSKTGLVDMARELFERIPD-KDVISWGTMIDSYTQ 307
+++GY + G +D+A +LF+++P KDV+ + M+D + +
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVK 188
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 48/281 (17%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R L +P L+ W I + PQ IR+F + + ++ ++S L +
Sbjct: 227 RKLFDAMPERNLVSW---NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPA 283
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
S + S G H + + ++++MY+KCG
Sbjct: 284 ISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCG-------------------- 323
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
+++ A ++FD MP K S+ MI G N AL++F MM +
Sbjct: 324 -----------EIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-K 371
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG----- 250
P+++T++ VI+AC+ G + R + ++ ++ + H C+ +G
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNA------KIEHYGCMVDLLGRAGSL 425
Query: 251 -EARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFER 289
EA L MP E N + + L+ + ++ A + ++
Sbjct: 426 KEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKK 466
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 4/234 (1%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLG--FHSNTFIQNSLINMYAKCGSISDARLL 123
E ++S L C +S G+ +H + G + SN + N+L++MY KC A+
Sbjct: 232 EYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA 291
Query: 124 FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEAL 183
F A D S N M+ G+V+ G ++ A +FD MP + VS+ +++ G + C +
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTV 351
Query: 184 -EVFKDM-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
E+F +M + + V P+ +T++++IS + GE+ + R +H L I+L + G +S+ L+
Sbjct: 352 RELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALID 411
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
YC C + A +F E+++ M+ G + G A +LF R+ ++ V
Sbjct: 412 MYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGV 465
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
++ C L N ++ Y++ G A ++F MP S+ MI G + E
Sbjct: 156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE 215
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA--VDGLVLVSTNL 239
AL+++ M+SD + P++ T+++++ C +I + +H + +++S L
Sbjct: 216 ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNAL 275
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWG 299
+ Y C G A+R FD M ++++ + N M+ G+ + G ++ A+ +F+++P +D++SW
Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWN 335
Query: 300 TMIDSYTQ 307
+++ Y++
Sbjct: 336 SLLFGYSK 343
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 33/198 (16%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ +VS + ++ S GR +H L ++L + F+ ++LI+MY KCG I A ++F+
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D MI+G G A QLF M +G
Sbjct: 429 ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG------------------------ 464
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWN-CRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
V PN++TL+ V++ACS G + + + + K D +L+ C
Sbjct: 465 -------VTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCR 517
Query: 246 CSGVGEARRLFD-KMPER 262
V EA+ + KMP R
Sbjct: 518 AGRVEEAKDIVQKKMPMR 535
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 29/223 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LKSC+S+S P G+Q+H K G + F+ +LI+MY KCG ++DAR +F+ P
Sbjct: 60 LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENP---- 115
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
++ QL V Y +I G N +A +F+ M
Sbjct: 116 -----------QSSQLS--------------VCYNALISGYTANSKVTDAAYMFRRMKET 150
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V + +T++ ++ C+ +W R +H +K +D V V + + Y C V
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
RRLFD+MP + L+T N +++GYS+ GL EL+E++ V
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGV 253
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
GR +H +K G S + NS I MY KCGS+ R
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR----------------------- 211
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
+LFD MP KG +++ +I G QN + LE+++ M S V P+ TL++V
Sbjct: 212 --------RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSV 263
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
+S+C+ G ++ H + + +G V VS + Y C + +AR +FD MP
Sbjct: 264 LSSCAHLGAK---KIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
++LV+ M+ Y G+ ++ LF+ + + +
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 112/293 (38%), Gaps = 72/293 (24%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECE--LALVSAL 73
R L E+P L+ W L D + ++ Q ++ C LVS L
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYD---VLELY---EQMKSSGVCPDPFTLVSVL 264
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
SC+ + + G ++ L GF N F+ N+ I+MYA+CG+++ AR +F
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF--------- 315
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE-ALEVFKDMMSD 192
DIMP K VS+T MI G GE L +F DM+
Sbjct: 316 ----------------------DIMPVKSLVSWTAMI-GCYGMHGMGEIGLMLFDDMIKR 352
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ P+ + V+SACS G L GL L
Sbjct: 353 GIRPDGAVFVMVLSACSHSG--------------LTDKGLELFRA--------------M 384
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISWGTMIDS 304
+R + P +C V L G + G +D A E E +P + D WG ++ +
Sbjct: 385 KREYKLEPGPEHYSCLVDLLG--RAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+ ++ L F E++ +++ M+ P+ + ++ +C+ + + +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN-LVTC-NVMLNGYSKTGLVDMA 283
K + V T L+ YC C V +AR++F++ P+ + L C N +++GY+ V A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 284 RELFERIPDKDVISWGTMIDSYT 306
+F R+ + G +DS T
Sbjct: 141 AYMFRRMKET-----GVSVDSVT 158
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 99 SNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLF-DI 157
N N++I+ Y +CG + A F+ PV V+ MI+GY+KA +++ A +F D+
Sbjct: 184 KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM 243
Query: 158 MPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC 217
K V++ MI G V+N + L++F+ M+ + + PN L + + CS +
Sbjct: 244 TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
R IH + K + V T+L+ YC C +G+A +LF+ M ++++V N M++GY++
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 278 GLVDMARELF-ERIPDKDVISWGTMI 302
G D A LF E I +K W T +
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFV 389
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 41/211 (19%)
Query: 99 SNTFIQNSL-INMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDI 157
NT NSL I + + +A LF P D S NIM+S YV+ + A FD
Sbjct: 90 KNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDR 149
Query: 158 MPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC 217
MP K S+ TMI G + +A E+F MM + V WN
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVS------------------WNA 191
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
++ Y C + +A F P R +V M+ GY K
Sbjct: 192 ---------------------MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKA 230
Query: 278 GLVDMARELFERIP-DKDVISWGTMIDSYTQ 307
V++A +F+ + +K++++W MI Y +
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVE 261
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 31/145 (21%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L SAL CS +S+ GRQIH + K ++ SLI+MY KCG + DA LF+
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
D V+ N MISGY + G D +AL +F+
Sbjct: 346 KKKDVVAWNAMISGYAQHGNAD-------------------------------KALCLFR 374
Query: 188 DMMSDSVVPNDLTLMNVISACSRFG 212
+M+ + + P+ +T + V+ AC+ G
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAG 399
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIKLAVDG---LVLVSTNLMHAYCLCS 247
D + P L +I+ C R G+I R+ H + K + L+ +S + S
Sbjct: 59 DQIFP----LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD-------PS 107
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ EA +LFD++PE + + N+ML+ Y + + A+ F+R+P KD SW TMI Y +
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYAR 167
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R + ELP PTL + L+++ ++ + + + + L ++
Sbjct: 89 RQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSR 148
Query: 76 CSSISSP-SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
S++ P S R +H+ +K + + +L++ Y K G + AR +F+ + V
Sbjct: 149 GSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVC 208
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN-DCFGEALEVFKDMMSDS 193
C MISGY+ G +++A ++F+ K V Y M++G ++ + +++++ M
Sbjct: 209 CTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAG 268
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
PN T +VI ACS + +HA +K V + + ++L+ Y C G+ +AR
Sbjct: 269 FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
R+FD+M E+N+ + M++GY K G + A ELF R+ +
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKE 367
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 30/241 (12%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+ AL+ + +P G++IH+ +K GF + I L+ ++ KCG +S AR +F P
Sbjct: 37 IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELP 96
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIM--PGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ N MISGY+K G + L M G+ YT + L+
Sbjct: 97 KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM-----------VLKAS 145
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
S ++P L CR++HA IK V+ ++ T L+ Y
Sbjct: 146 NSRGSTMILPRSL-----------------CRLVHARIIKCDVELDDVLITALVDTYVKS 188
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+ AR +F+ M + N+V C M++GY G V+ A E+F KD++ + M++ ++
Sbjct: 189 GKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFS 248
Query: 307 Q 307
+
Sbjct: 249 R 249
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 31/144 (21%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
S + +CS ++S G+Q+H+ +K G +++ + +SL++MYAKCG I+DAR +F
Sbjct: 276 FASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ 335
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
+ S MI GY K G + EALE+F
Sbjct: 336 EKNVFSWTSMIDGYGKNGNPE-------------------------------EALELFTR 364
Query: 189 MMSDSVVPNDLTLMNVISACSRFG 212
M + PN +T + +SACS G
Sbjct: 365 MKEFRIEPNYVTFLGALSACSHSG 388
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 1/212 (0%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G+ IH +++G S+T++ N L+++Y +CG AR +F V D S N ++ K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
G L AC++FD MP + VS+ MI LV+ +AL V+K M+ D +P+ TL +V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG-VGEARRLFDKMPERN 263
+SACS+ + H +A+K +D + V L+ Y C V R+F+ + + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
V+ ++ G ++ V A ++F + +K V
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGV 236
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 45/294 (15%)
Query: 4 LISASFRFRIVH--RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQ- 60
++ A FR V R + +P P++ W S + +H N RQ Q
Sbjct: 356 VLGACFRSGDVETGRRIFSSIPQPSVSAWNAML------SGYSNYEHYEEAISNFRQMQF 409
Query: 61 ---NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSI 117
P + L+++ L SC+ + G+QIH + ++ N+ I + LI +Y++C +
Sbjct: 410 QNLKPDKTTLSVI--LSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 118 SDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQND 177
+ +F C +LD AC + +MI G N
Sbjct: 468 EISECIFDDC-----------------INELDIAC-------------WNSMISGFRHNM 497
Query: 178 CFGEALEVFKDMMSDSVV-PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
+AL +F+ M +V+ PN+ + V+S+CSR + + R H L +K V
Sbjct: 498 LDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE 557
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
T L YC C + AR+ FD + +N V N M++GY G D A L+ ++
Sbjct: 558 TALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 74/285 (25%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L S L +CS + G + H +A+K G N F+ N+L++MYAKCG I
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI--------- 189
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+D ++F+ + VSYT +I GL + + EA+++F
Sbjct: 190 ---------------------VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF 228
Query: 187 KDMMSDSVVPNDLTLMNVIS------ACSRFGEIWN---CRMIHALAIKLAVDGLVLVST 237
+ M V + + L N++S C EI+ + IH LA++L G + ++
Sbjct: 229 RLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNN 288
Query: 238 NLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS---------------------- 275
+L+ Y + A +F +MPE N+V+ N+M+ G+
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 276 -------------KTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
++G V+ R +F IP V +W M+ Y+
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 36/258 (13%)
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
S S I G+QIH LAL+LGF + + NSL+ +YAK ++ A L+F P ++ VS
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 135 CNIMISGY-----------------------------------VKAGQLDNACQLFDIMP 159
NIMI G+ ++G ++ ++F +P
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
++ M+ G + + EA+ F+ M ++ P+ TL ++S+C+R + +
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK-MPERNLVTCNVMLNGYSKTG 278
IH + I+ + + + L+ Y C + + +FD + E ++ N M++G+
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNM 497
Query: 279 LVDMARELFERIPDKDVI 296
L A LF R+ V+
Sbjct: 498 LDTKALILFRRMHQTAVL 515
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 45/243 (18%)
Query: 57 RQHQNPAEC--ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKC 114
R HQ C E + + L SCS + S GRQ H L +K G+ S++F++ +L +MY KC
Sbjct: 508 RMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKC 567
Query: 115 GSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLV 174
G I AR F A + V N MI GY G+ D
Sbjct: 568 GEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGD------------------------- 602
Query: 175 QNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVL 234
EA+ +++ M+S P+ +T ++V++ACS G + L I ++ +
Sbjct: 603 ------EAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET-----GLEILSSMQRIHG 651
Query: 235 VSTNLMHAYCLCSGVGEARRLFD--KMPE-----RNLVTCNVMLNGYSKTGLVDMARELF 287
+ L H C+ +G A RL D K+ E + V ++L+ G V +AR +
Sbjct: 652 IEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVA 711
Query: 288 ERI 290
E++
Sbjct: 712 EKL 714
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
++IH +++ + + L+ Y C AR++FD+M R++ + N L K
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 278 GLVDMARELFERIPDKDVISWGTMI 302
G + A E+F+ +P++DV+SW MI
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMI 110
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 47/304 (15%)
Query: 41 SLLQDPQHCIRIFCNARQHQ-NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHS 99
S + P +R F + ++Q P + ++V L +C+ ++ GRQIH +K+G
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIV--LSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDP--VSCNIMISGYVKAGQLDNACQLFDI 157
N++ +L++MYAKC ISDAR +F+ ++DP V + SGYVKAG + A +F+
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEW--IVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 158 MPGKG-----------------------------------CVSYTTMIKGLVQNDCFGEA 182
M +G V++ MI G + C A
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
+E F +M SV TL +V+SA + ++HA AIKL + + V ++L+
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
Y C + A ++F+ + E+N V N M+ GY+ G ELF D+ S G I
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF-----MDMKSSGYNI 426
Query: 303 DSYT 306
D +T
Sbjct: 427 DDFT 430
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 120/242 (49%), Gaps = 34/242 (14%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ S L +C++ G Q HS+ +K N F+ N+L++MYAKCG+
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA--------- 478
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
L++A Q+F+ M + V++ T+I VQ++ EA ++
Sbjct: 479 ----------------------LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
FK M +V + L + + AC+ ++ + +H L++K +D + ++L+ Y
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSK 576
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL---VDMARELFERIPDKDVISWGTMI 302
C + +AR++F +PE ++V+ N ++ GYS+ L V + +E+ R + I++ T++
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 303 DS 304
++
Sbjct: 637 EA 638
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 34/238 (14%)
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSN-TFIQNSLINMYAKCGSISD 119
NP+E A + +++C S + G Q H K GF S ++ SL+ MY +
Sbjct: 626 NPSEITFATI--VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM------N 677
Query: 120 ARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF 179
+R + +AC + +S K V +T M+ G QN +
Sbjct: 678 SRGMTEACALFSELS------------------------SPKSIVLWTGMMSGHSQNGFY 713
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNL 239
EAL+ +K+M D V+P+ T + V+ CS + R IH+L LA D L S L
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 240 MHAYCLCSGVGEARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
+ Y C + + ++FD+M R N+V+ N ++NGY+K G + A ++F+ + ++
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 32/242 (13%)
Query: 49 CIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLI 108
I F N R+ + L S L + +++ G +H+ A+KLG SN ++ +SL+
Sbjct: 311 AIEYFFNMRK-SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 109 NMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTT 168
+MY+KC +++ A ++F+ + K V +
Sbjct: 370 SMYSKCE-------------------------------KMEAAAKVFEALEEKNDVFWNA 398
Query: 169 MIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA 228
MI+G N + +E+F DM S +D T +++S C+ ++ H++ IK
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 229 VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ + V L+ Y C + +AR++F++M +R+ VT N ++ Y + A +LF+
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 289 RI 290
R+
Sbjct: 519 RM 520
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G+ +HS +L LG S + N+++++YAKC +S A F D + N M+S Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSS 137
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
G+ PGK L F + + + PN T V
Sbjct: 138 IGK-----------PGK--------------------VLRSFVSLFENQIFPNKFTFSIV 166
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+S C+R + R IH IK+ ++ L+ Y C + +ARR+F+ + + N
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
V + +GY K GL + A +FER+ D+ D +++ T+I++Y +
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 37/199 (18%)
Query: 53 FCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYA 112
F +H + V+ L+ CS +SS +GR IHSL
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL--------------------- 757
Query: 113 KCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG-CVSYTTMIK 171
+F LD ++ N +I Y K G + + Q+FD M + VS+ ++I
Sbjct: 758 ----------IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 172 GLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDG 231
G +N +AL++F M ++P+++T + V++ACS G++ + R I + I G
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI-----G 862
Query: 232 LVLVSTNLMHAYCLCSGVG 250
+ + H C+ +G
Sbjct: 863 QYGIEARVDHVACMVDLLG 881
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 129/254 (50%), Gaps = 34/254 (13%)
Query: 44 QDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGF-HSNTF 102
+DP+ R+FC R A L L+ +K+C ++ + G+ +H ++++ F + +
Sbjct: 190 KDPE-VFRLFCLMRD-TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
+Q S+I+MY KC RLL DNA +LF+ +
Sbjct: 248 LQASIIDMYVKC------RLL-------------------------DNARKLFETSVDRN 276
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHA 222
V +TT+I G + + EA ++F+ M+ +S++PN TL ++ +CS G + + + +H
Sbjct: 277 VVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHG 336
Query: 223 LAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDM 282
I+ ++ + T+ + Y C + AR +FD MPERN+++ + M+N + GL +
Sbjct: 337 YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEE 396
Query: 283 ARELFERIPDKDVI 296
A + F ++ ++V+
Sbjct: 397 ALDCFHKMKSQNVV 410
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 57 RQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS 116
R+ P +C LA + L SCSS+ S G+ +H ++ G + S I+MYA+CG+
Sbjct: 305 RESILPNQCTLAAI--LVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
I AR +F D+MP + +S+++MI N
Sbjct: 363 IQMARTVF-------------------------------DMMPERNVISWSSMINAFGIN 391
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI---WNCRMIHALAIKLAVDGLV 233
F EAL+ F M S +VVPN +T ++++SACS G + W + ++
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGW--KQFESMTRDYG----- 444
Query: 234 LVSTNLMHAYCL------CSGVGEARRLFDKMPERNLVTC-NVMLNGYSKTGLVDMAREL 286
V H C+ +GEA+ D MP + + + +L+ VD+A E+
Sbjct: 445 -VVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEI 503
Query: 287 FERI----PDKDVI 296
E++ P+K +
Sbjct: 504 AEKLLSMEPEKSSV 517
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 37/248 (14%)
Query: 52 IFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMY 111
++ R+H + + LV A+K+C + G IH LA+K G + ++ SL+ MY
Sbjct: 96 LYNRMRRHCDGVD-SFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMY 154
Query: 112 AKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIK 171
A+ G++ A+ +F PV + V +++ GY+K + +LF +M G
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG--------- 205
Query: 172 GLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF--GEIWNCRMIHALAIKLA- 228
+ + LTL+ ++ AC G++ C +H ++I+ +
Sbjct: 206 ----------------------LALDALTLICLVKACGNVFAGKVGKC--VHGVSIRRSF 241
Query: 229 VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+D + +++ Y C + AR+LF+ +RN+V +++G++K A +LF
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 289 RIPDKDVI 296
++ + ++
Sbjct: 302 QMLRESIL 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 138 MISGYVKAGQLDNACQLFDIMP--GKGCVSYTTMIKGLVQND--CFGEALEVFKDMMSDS 193
+ + Y+++ +LD A F+ +P + S+ T++ G ++ C+ + L ++ M
Sbjct: 45 LTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHC 104
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
+ L+ I AC G + N +IH LA+K +D V+ +L+ Y + A+
Sbjct: 105 DGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQ 164
Query: 254 RLFDKMPERNLVTCNVMLNGYSK 276
++FD++P RN V V++ GY K
Sbjct: 165 KVFDEIPVRNSVLWGVLMKGYLK 187
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
++ + S L S + GR IH +K G + + +++I+MY K G + LF
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGE 181
+++ CN I+G + G +D A ++F++ + VS+T++I G QN E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
ALE+F++M V PN +T+ +++ AC + + R H A+++ + V V + L+
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
Y C + ++ +F+ MP +NLV N ++NG+S G +FE +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 12/294 (4%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+P+PT+ + + L I +F H + + L + K C+ +S+
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFT---QSIGVFSRMFSHGLIPDSHV-LPNLFKVCAELSA 131
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
G+QIH ++ G + F+Q S+ +MY +CG + DAR +F D V+C+ ++
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 142 YVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
Y + G L+ ++ M G VS+ ++ G ++ EA+ +F+ + P+
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD 257
+T+ +V+ + + R+IH IK + V + ++ Y V LF+
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 258 KMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
+ CN + G S+ GLVD A E+FE ++ +V+SW ++I Q
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 35/225 (15%)
Query: 87 QIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAG 146
Q H+ LK G ++ +I LI Y+ +DA L+ Q+ P DP
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP--DPT------------- 80
Query: 147 QLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
S++++I L + F +++ VF M S ++P+ L N+
Sbjct: 81 ----------------IYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFK 124
Query: 207 ACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVT 266
C+ + IH ++ +D V ++ H Y C +G+AR++FD+M ++++VT
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 267 CNVMLNGYSKTG----LVDMARELFERIPDKDVISWGTMIDSYTQ 307
C+ +L Y++ G +V + E+ + +++SW ++ + +
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 122/226 (53%), Gaps = 3/226 (1%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+KS S +S+ G +H +K G + FI N+LI+MY + AR LF P +
Sbjct: 115 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 174
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS- 191
V+ N ++ Y K+G + +A +FD M + V++++MI G V+ + +ALE+F MM
Sbjct: 175 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 234
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
S N++T+++VI AC+ G + + +H + + + V++ T+L+ Y C +G+
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 294
Query: 252 ARRLFDK--MPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
A +F + + E + + N ++ G + G + + +LF ++ + +
Sbjct: 295 AWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKI 340
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%)
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS + S +G +D A + + + +I+G + +++ V+ M+
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
++P+ +T ++ + SR +H +K ++ + + L+H Y A
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
R+LFD+MP +NLVT N +L+ Y+K+G V AR +F+ + ++DV++W +MID Y +
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVK 217
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 91/245 (37%), Gaps = 34/245 (13%)
Query: 2 LVLISASFRFRIVHRSLSLELPNPTLLRW----------------------------VXX 33
L+ + SFR + R L E+P+ L+ W V
Sbjct: 149 LIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 34 XXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLAL 93
I + + IF + + E+ +VS + +C+ + + ++G+ +H L
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV--LDPVSCNIMISGYVKAGQLDNA 151
+ +Q SLI+MYAKCGSI DA +F V D + N +I G G + +
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
QLF M +++ ++ EA FK + P ++
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDV 388
Query: 208 CSRFG 212
SR G
Sbjct: 389 LSRAG 393
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
++++SA+ SCS + + G+ H L+ GF S I N+LI+MY KC A +F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
V+ N +++GYV+ G++D A + F+ MP K VS+ T+I GLVQ F EA+EVF
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 187 KDMMSDSVVPND-LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
M S V D +T+M++ SAC G + + I+ K + V + T L+ +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
C A +F+ + R++ + + G + A ELF+ + ++
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 31/241 (12%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ +V + +C+ + G ++++ G N + ++L++MY KC +I A+ LF
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ CN M S YV+ +GL + EAL VF
Sbjct: 297 YGASNLDLCNAMASNYVR--------------------------QGLTR-----EALGVF 325
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
MM V P+ +++++ IS+CS+ I + H ++ + + L+ Y C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
A R+FD+M + +VT N ++ GY + G VD A E FE +P+K+++SW T+I
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 307 Q 307
Q
Sbjct: 446 Q 446
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
L +C+ + G QIH L +K+G+ + F+QNSL++ YA+CG + AR +F +
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
VS MI GY + +A LF F+ +
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLF------------------------------FRMVRD 229
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ V PN +T++ VISAC++ ++ ++A ++ L+ + L+ Y C+ +
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
A+RLFD+ NL CN M + Y + GL A +F + D V
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 151 ACQLFDIMPGKG-CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACS 209
A ++F+ G C Y ++I+G + EA+ +F MM+ + P+ T +SAC+
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 210 RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNV 269
+ N IH L +K+ + V +L+H Y C + AR++FD+M ERN+V+
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 270 MLNGYSKTGLVDMARELFER-IPDKDV 295
M+ GY++ A +LF R + D++V
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEV 232
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 111/276 (40%), Gaps = 46/276 (16%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+P ++ W + SL ++ I +FC+ + + + ++S +C + +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEA---IEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
+ I+ K G + + +L++M+++CG DP
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG---------------DP--------- 521
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
++A +F+ + + ++T I + A+E+F DM+ + P+ +
Sbjct: 522 -------ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG------EARRL 255
+ ++ACS G + + I +KL VS +H C+ +G EA +L
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHG-----VSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 256 FDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ MP E N V N +L G V+MA E+I
Sbjct: 630 IEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%)
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
+++N + G + A LF PV D + N M+ GY++ G++D+A +LF MPGK +S
Sbjct: 133 AMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVIS 192
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+TTMI GL QN+ GEAL++FK+M+ + VI+AC+ +H L I
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
KL VS +L+ Y C +G++R++FD+ + +L+GYS
Sbjct: 253 KLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 45/226 (19%)
Query: 78 SISSPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCN 136
SIS G+ S ++ + F + I N L++ I +AR +F P
Sbjct: 16 SISHVIHGKCYRSFSVTVEFQNREVLICNHLLSR-----RIDEAREVFNQVPSPHVSLYT 70
Query: 137 IMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVP 196
MI+GY ++ +L +A LFD MP + VS+ +MI G V+ A+++F +M SVV
Sbjct: 71 KMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV- 129
Query: 197 NDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLF 256
+ +++ C R G+ V +A RLF
Sbjct: 130 ---SWTAMVNGCFRSGK-----------------------------------VDQAERLF 151
Query: 257 DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
+MP ++ N M++GY + G VD A +LF+++P K+VISW TMI
Sbjct: 152 YQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMI 197
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+ +C++ + G Q+H L +KLGF ++ SLI YA C I D+R
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR----------- 280
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
++FD + +T ++ G N +AL +F M+ +
Sbjct: 281 --------------------KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
S++PN T + +++CS G + + +H +A+KL ++ V +L+ Y V +A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+F K+ ++++V+ N ++ G ++ G A +F
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 39/172 (22%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
++I ++ + ++D A ++F+ +P YT MI G +++ +AL +F +M VV
Sbjct: 39 EVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVV 98
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
+ ++IS C C + A +L
Sbjct: 99 ----SWNSMISGCVE-----------------------------------CGDMNTAVKL 119
Query: 256 FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
FD+MPER++V+ M+NG ++G VD A LF ++P KD +W +M+ Y Q
Sbjct: 120 FDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 41/198 (20%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
S L SCS++ + G+++H +A+KLG ++ F+ NSL+ MY+ G+++DA
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA------- 380
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
+S ++K + K VS+ ++I G Q+ A +F
Sbjct: 381 -----------VSVFIKIFK-------------KSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL-- 245
M+ + P+++T ++SACS G + R + G+ + + H C+
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL----FYYMSSGINHIDRKIQHYTCMVD 472
Query: 246 ----CSGVGEARRLFDKM 259
C + EA L ++M
Sbjct: 473 ILGRCGKLKEAEELIERM 490
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 111/199 (55%), Gaps = 4/199 (2%)
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQ 153
KLGF S+ ++Q +L+ MY G++ DA +F P +PV+ N+MI+G G + A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 154 LFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS-DSVVPNDLTLMNVISACSRFG 212
+ MP + VS+TT+I G + D EA+ +F M++ D++ PN++T++ ++ A G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 213 EIWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP--ERNLVTCNV 269
++ C +HA K V + V+ +L+ AY C + A + F ++P +NLV+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 270 MLNGYSKTGLVDMARELFE 288
M++ ++ G+ A +F+
Sbjct: 331 MISAFAIHGMGKEAVSMFK 349
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY-TTMIKGLVQNDCFGEALEVFK 187
++ + + SG++ Q N+ +LF P C S T + D + L
Sbjct: 52 IIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQL-QRLHFLS 110
Query: 188 DMMSDSVVPND-LTLMNVISACS--RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
D + S+ P D T + ++ A S RF + +H L +KL + V V T L+ Y
Sbjct: 111 DH-NKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYL 169
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
+ + +A ++FD+MPERN VT NVM+ G + G + A E++P++ V+SW T+ID
Sbjct: 170 VGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDG 229
Query: 305 YTQ 307
Y +
Sbjct: 230 YAR 232
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 37/195 (18%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
++PN T++ W I + + P+ I +F E+ +++ L + ++
Sbjct: 214 KMPNRTVVSWTTI---IDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 81 SPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMI 139
+H+ K GF + + NSLI+ YAKCG I
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCI---------------------- 308
Query: 140 SGYVKAGQLDNACQLFDIMPG--KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
+A + F +P K VS+TTMI + EA+ +FKDM + PN
Sbjct: 309 ---------QSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 198 DLTLMNVISACSRFG 212
+T+++V++ACS G
Sbjct: 360 RVTMISVLNACSHGG 374
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
++++SA+ SCS + + G+ H L+ GF S I N+LI+MY KC A +F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
V+ N +++GYV+ G++D A + F+ MP K VS+ T+I GLVQ F EA+EVF
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 187 KDMMSDSVVPND-LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
M S V D +T+M++ SAC G + + I+ K + V + T L+ +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
C A +F+ + R++ + + G + A ELF+
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 31/241 (12%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ +V + +C+ + G ++++ G N + ++L++MY KC +I A+ LF
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ CN M S YV+ +GL + EAL VF
Sbjct: 297 YGASNLDLCNAMASNYVR--------------------------QGLTR-----EALGVF 325
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
MM V P+ +++++ IS+CS+ I + H ++ + + L+ Y C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
A R+FD+M + +VT N ++ GY + G VD A E FE +P+K+++SW T+I
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 307 Q 307
Q
Sbjct: 446 Q 446
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
L +C+ + G QIH L +K+G+ + F+QNSL++ YA+CG + AR +F +
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN 199
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
VS MI GY + +A LF F+ +
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLF------------------------------FRMVRD 229
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ V PN +T++ VISAC++ ++ ++A ++ L+ + L+ Y C+ +
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
A+RLFD+ NL CN M + Y + GL A +F + D V
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 151 ACQLFDIMPGKG-CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACS 209
A ++F+ G C Y ++I+G + EA+ +F MM+ + P+ T +SAC+
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 210 RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNV 269
+ N IH L +K+ + V +L+H Y C + AR++FD+M ERN+V+
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 270 MLNGYSKTGLVDMARELFER-IPDKDV 295
M+ GY++ A +LF R + D++V
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEV 232
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 111/276 (40%), Gaps = 46/276 (16%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+P ++ W + SL ++ I +FC+ + + + ++S +C + +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEE---AIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
+ I+ K G + + +L++M+++CG DP
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG---------------DP--------- 521
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
++A +F+ + + ++T I + A+E+F DM+ + P+ +
Sbjct: 522 -------ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG------EARRL 255
+ ++ACS G + + I +KL VS +H C+ +G EA +L
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHG-----VSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 256 FDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ MP E N V N +L G V+MA E+I
Sbjct: 630 IEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 67/287 (23%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSI---------- 117
L+ L + + + G QIHSLA K G +S+ ++ I++Y+KCG I
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 118 ---------------------------------SDARLLFQACPVLDPVSCNIMI----- 139
S ARL L PVS ++M+
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIH 342
Query: 140 -------------------SGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
+ Y K ++++A +LFD P K S+ MI G QN
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
+A+ +F++M PN +T+ ++SAC++ G + + +H L + + VST L+
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
Y C + EARRLFD M ++N VT N M++GY G A +F
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 37 IKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
++ S+ + P + +F + R+ + A+ + S GR IH A+ G
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
S + ++++ MY K + DAR ++FD
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDAR-------------------------------KVFD 178
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT-LMNVISACSRFGEIW 215
MP K + + TMI G +N+ + E+++VF+D++++S D T L++++ A + E+
Sbjct: 179 RMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR 238
Query: 216 NCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
IH+LA K V T + Y C + LF + + ++V N M++GY+
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT 298
Query: 276 KTGLVDMARELFERI 290
G +++ LF+ +
Sbjct: 299 SNGETELSLSLFKEL 313
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 52/246 (21%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R L E P +L W L +D R + NP + + L +
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP----VTITCILSA 429
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
C+ + + S G+ +H L F S+ ++ +LI MYAKCGSI++AR LF + V+
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
N MISGY GQ G+ EAL +F +M++ +
Sbjct: 490 NTMISGYGLHGQ------------GQ-------------------EALNIFYEMLNSGIT 518
Query: 196 PNDLTLMNVISACSRFG------EIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
P +T + V+ ACS G EI+N MIH + +V H C+ +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNS-MIHRYGFEPSVK----------HYACMVDIL 567
Query: 250 GEARRL 255
G A L
Sbjct: 568 GRAGHL 573
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDM-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
+ +++G N+ +L VF + S + PN T ISA S F + R+IH A
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
+ D +L+ +N++ Y V +AR++FD+MPE++ + N M++GY K + +
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 285 ELF 287
++F
Sbjct: 206 QVF 208
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 119/230 (51%), Gaps = 16/230 (6%)
Query: 83 SQGRQIHSLAL-----KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNI 137
S+G +H+ L + G + SL++ YAK G + +AR+LF+ P + V+CN
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNA 113
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
M++GYVK +++ A LF MP K VS+T M+ L + +A+E+F +M +VV
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSW 172
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM-HAYCLCSGVGEARRLF 256
+ + +I N M A + A+ +VS N M Y G+ EA+ LF
Sbjct: 173 NTLVTGLIR---------NGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLF 223
Query: 257 DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
M E+N+VT M+ GY + G V A LF +P+++++SW MI +
Sbjct: 224 GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 14/213 (6%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
N++I Y + + +A+LLF + V+ M+ GY + G + A +LF MP + V
Sbjct: 204 NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMS--DSVVPNDLTLMNVISACS-------RFGEIW 215
S+T MI G N+ + EAL +F +M D+V PN TL+++ AC R GE
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 216 NCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
+ ++I + DG ++ +L+H Y + A+ L ++ +L +CN+++N Y
Sbjct: 324 HAQVISNGWETVDHDG--RLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYL 379
Query: 276 KTGLVDMARELFERIPD-KDVISWGTMIDSYTQ 307
K G ++ A LFER+ D +SW +MID Y +
Sbjct: 380 KNGDLERAETLFERVKSLHDKVSWTSMIDGYLE 412
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVL-DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC 163
N +IN Y K G + A LF+ L D VS MI GY++AG + A LF + K
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 164 VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHAL 223
V++T MI GLVQN+ F EA + DM+ + P + T ++S+ + + IH +
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 224 AIKLAV--DGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVD 281
K D +++ +L+ Y C + +A +F KM +++ V+ N M+ G S GL D
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLAD 551
Query: 282 MARELFERIPD 292
A LF+ + D
Sbjct: 552 KALNLFKEMLD 562
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 44/197 (22%)
Query: 115 GSISDARLLFQACP----VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMI 170
G + AR L P + V ++S Y K G LD A LF++MP + V+ M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 171 KGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD 230
G V+ EA +F++M P NV+S W
Sbjct: 116 TGYVKCRRMNEAWTLFREM------PK-----NVVS--------W--------------- 141
Query: 231 GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
T ++ A C +A LFD+MPERN+V+ N ++ G + G ++ A+++F+ +
Sbjct: 142 ------TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 291 PDKDVISWGTMIDSYTQ 307
P +DV+SW MI Y +
Sbjct: 196 PSRDVVSWNAMIKGYIE 212
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLG--FHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
L S + S+ QG+ IH + K + + +QNSL++MYAKCG+I DA +F
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D VS N MI G G D +AL +FK+M+
Sbjct: 533 DTVSWNSMIMGLSHHGLAD-------------------------------KALNLFKEML 561
Query: 191 SDSVVPNDLTLMNVISACSRFGEI 214
PN +T + V+SACS G I
Sbjct: 562 DSGKKPNSVTFLGVLSACSHSGLI 585
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G IHS A + HSN L+ +K G + +AR +F P D + N MI Y
Sbjct: 17 GSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
+ +L +A +LF P K +S+ +I G ++ EA +F +M SD + PN+ TL +V
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP-ERN 263
+ C+ + IH IK D V V L+ Y C + EA LF+ M E+N
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
VT ML GYS+ G A E F +D+ G + YT
Sbjct: 192 NVTWTSMLTGYSQNGFAFKAIECF-----RDLRREGNQSNQYT 229
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 41/244 (16%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E L S L+ C+S+ +G QIH +K GF + + N L+ MYA+C IS+A LF+
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
G+ +N V++T+M+ G QN +A+E
Sbjct: 185 TME-----------------GEKNN-------------VTWTSMLTGYSQNGFAFKAIEC 214
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM---IHALAIKLAVDGLVLVSTNLMHA 242
F+D+ + N T +V++AC+ + CR+ +H +K + V + L+
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACA---SVSACRVGVQVHCCIVKSGFKTNIYVQSALIDM 271
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
Y C + AR L + M ++V+ N M+ G + GL+ A +F R+ ++D+ I
Sbjct: 272 YAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM-----KI 326
Query: 303 DSYT 306
D +T
Sbjct: 327 DDFT 330
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 128/311 (41%), Gaps = 72/311 (23%)
Query: 49 CIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLI 108
I F + R+ N + + S L +C+S+S+ G Q+H +K GF +N ++Q++LI
Sbjct: 211 AIECFRDLRREGNQSN-QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 109 NMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK------- 161
+MYAKC + AR L + V D VS N MI G V+ G + A +F M +
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 162 -----------------------------GCVSYTTMIKGLV----QNDCFGEALEVFKD 188
G +Y + LV + AL+VF+
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 189 MMSDSVV-------------------------------PNDLTLMNVISACSRFGEIWNC 217
M+ V+ P+ + +V+SA + +
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
+ +H IK + V+ +L+ Y C + +A +F+ M R+L+T ++ GY+K
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN 509
Query: 278 GLVDMARELFE 288
GL++ A+ F+
Sbjct: 510 GLLEDAQRYFD 520
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 20/227 (8%)
Query: 48 HCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSL 107
+++FCN R + ++ S L + + ++ G+Q+H +K GF S+ + NSL
Sbjct: 413 EALKLFCNMRVGGITPD-KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSL 471
Query: 108 INMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD-------IMPG 160
+ MY KCGS+ DA ++F + + D ++ +I GY K G L++A + FD I PG
Sbjct: 472 VTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPG 531
Query: 161 KGCVSYTTMIKGLVQNDCFGEALEVFK--DMMSDSVVPNDLTLMNVISACSR-FGEIWNC 217
Y MI D FG + + K ++ V D T+ I A SR G I N
Sbjct: 532 PE--HYACMI------DLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
++L + V L + Y EA + M RN+
Sbjct: 584 ERAAKTLMELEPNNAVPY-VQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 31/225 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E +V L +CS I +G+Q+HS LKLGF + F +L++MYAK G ++D
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD------ 375
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
A + FD + + +T++I G VQN EAL +
Sbjct: 376 -------------------------ARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
++ M + ++PND T+ +V+ ACS + + +H IK V + + L Y
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C + + +F + P +++V+ N M++G S G D A ELFE +
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 32/205 (15%)
Query: 85 GRQIHSLALKLGFHSNTFIQ--NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGY 142
GR +H ++ G ++T IQ N L+N YAKCG ++ A +F A D VS N +I+GY
Sbjct: 33 GRAVHGQIIRTG--ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGY 90
Query: 143 VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
+ G + + SYT M ++F++M + ++PN TL
Sbjct: 91 SQNGGISS--------------SYTVM--------------QLFREMRAQDILPNAYTLA 122
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER 262
+ A S R HAL +K++ G + V T+L+ YC V + ++F MPER
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 263 NLVTCNVMLNGYSKTGLVDMARELF 287
N T + M++GY+ G V+ A ++F
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVF 207
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L K+ SS+ S + GRQ H+L +K+ + ++ SL+ MY K G + D +F P
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
+ + + M+SGY G+++ A ++F++ + K+
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE-------------------------KE 215
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
SDS D V+S+ + + R IH + IK + G V +S L+ Y C
Sbjct: 216 EGSDS----DYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ EA ++FD +RN +T + M+ GYS+ G A +LF R+
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 119/275 (43%), Gaps = 33/275 (12%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+P W +++ +F R+ + ++ + + L S ++
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL--REKEEGSDSDYVFTAVLSSLAATIY 236
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
GRQIH + +K G + N+L+ MY+KC S
Sbjct: 237 VGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES------------------------- 271
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
L+ AC++FD + ++++ M+ G QN EA+++F M S + P++ T+
Sbjct: 272 ------LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
+ V++ACS + + +H+ +KL + + +T L+ Y + +AR+ FD + E
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
R++ +++GY + + A L+ R+ +I
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 31/144 (21%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+ S LK+CSS+++ G+Q+H +K GF I ++L MY+KCGS+ D L+F+ P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
D VS N MISG GQ D A +LF+ +
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFE-------------------------------E 514
Query: 189 MMSDSVVPNDLTLMNVISACSRFG 212
M+++ + P+D+T +N+ISACS G
Sbjct: 515 MLAEGMEPDDVTFVNIISACSHKG 538
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 36/239 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L +VS L++C S+ + G+++H+ +K N +I ++L+ +Y KCG DA + Q
Sbjct: 386 LTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQ 445
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+P + VS+T MI G EAL+
Sbjct: 446 -------------------------------LPSRDVVSWTAMISGCSSLGHESEALDFL 474
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
K+M+ + V PN T + + AC+ + R IH++A K V V + L+H Y C
Sbjct: 475 KEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKC 534
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
V EA R+FD MPE+NLV+ M+ GY++ G A +L R+ + G +D Y
Sbjct: 535 GFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAE-----GFEVDDY 588
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 31/230 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + S LK+CS + GRQ+HSL +K ++ F+ SL++MYAKCG ISD R
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR---- 339
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
++FD M + V++T++I + EA+ +
Sbjct: 340 ---------------------------KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+ M ++ N+LT+++++ AC G + + +HA IK +++ V + + L+ YC
Sbjct: 373 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK 432
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C +A + ++P R++V+ M++G S G A + + + + V
Sbjct: 433 CGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 44/261 (16%)
Query: 38 KAPSLLQDP-QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
+A +L +D +H IR F N R V L CS + GRQ+H +K+G
Sbjct: 166 EAFALFEDYVKHGIR-FTNERM----------FVCLLNLCSRRAEFELGRQVHGNMVKVG 214
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
N +++SL+ YA+CG +L +A + FD
Sbjct: 215 V-GNLIVESSLVYFYAQCG-------------------------------ELTSALRAFD 242
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
+M K +S+T +I + +A+ +F M++ +PN+ T+ +++ ACS +
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
R +H+L +K + V V T+LM Y C + + R++FD M RN VT ++ +++
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 277 TGLVDMARELFERIPDKDVIS 297
G + A LF + + +I+
Sbjct: 363 EGFGEEAISLFRIMKRRHLIA 383
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV- 194
N +IS V+ G L A ++FD MP K V++T MI G ++ EA +F+D + +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
N+ + +++ CSR E R +H +K+ V L+ V ++L++ Y C + A R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTSALR 239
Query: 255 LFDKMPERNLVTCNVMLNGYSKTG 278
FD M E+++++ +++ S+ G
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKG 263
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 31/138 (22%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
SALK+C++ S GR IHS+A K SN F+ ++LI+MYAKCG +S+A
Sbjct: 491 SALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA---------- 540
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
++FD MP K VS+ MI G +N EAL++ M
Sbjct: 541 ---------------------FRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Query: 191 SDSVVPNDLTLMNVISAC 208
++ +D ++S C
Sbjct: 580 AEGFEVDDYIFATILSTC 597
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
+ IHA+A+K D ++ NL+ + + AR++FD MPE+N VT M++GY K
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 278 GLVDMARELFE 288
GL D A LFE
Sbjct: 162 GLEDEAFALFE 172
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 115/224 (51%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ ++S ++C S G ++H ++ + + N++I YAKCGS+ AR LF
Sbjct: 235 VTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDE 294
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D V+ +ISGY+ G + A LF M G ++ MI GL+QN+ E + F
Sbjct: 295 MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSF 354
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
++M+ PN +TL +++ + + + + IHA AI+ D + V+T+++ Y
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKL 414
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ A+R+FD +R+L+ ++ Y+ G D A LF+++
Sbjct: 415 GFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
++ AL C S RQ+H ++ GF S+ F+ N +I Y KC +I AR +F
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMS 194
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
D VS N MISGY ++G ++ +++ M A FK
Sbjct: 195 ERDVVSWNSMISGYSQSGSFEDCKKMYKAML----------------------ACSDFK- 231
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
PN +T+++V AC + ++ +H I+ + + + ++ Y C
Sbjct: 232 -------PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS 284
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ AR LFD+M E++ VT +++GY GLV A LF + + +W MI Q
Sbjct: 285 LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM------S 191
+IS Y + + A +FD + + SY ++ + + +A +F + S
Sbjct: 63 LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSS 122
Query: 192 DSVVPNDLTLMNVISACSRFGEIW---NCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
D+ P+ +++ V+ A S + W R +H I+ D V V ++ Y C
Sbjct: 123 DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ AR++FD+M ER++V+ N M++GYS++G + +++++
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 42/292 (14%)
Query: 4 LISASFRFRIVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPA 63
L SA F + R + T++ W KA S+ + ++C + +
Sbjct: 204 LDSAKLVFEAIDRG------DRTVVSW---NSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 64 ECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLL 123
+ ++ SC + + +QGR IHS A+ LG + N+ I+MY+K ARLL
Sbjct: 255 DLS-TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 124 FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEAL 183
FDIM + CVS+T MI G + EAL
Sbjct: 314 -------------------------------FDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA-IKLAVDGLVLVSTNLMHA 242
+F M+ P+ +TL+++IS C +FG + + I A A I V++ L+
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
Y C + EAR +FD PE+ +VT M+ GY+ G+ A +LF ++ D D
Sbjct: 403 YSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%)
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
E+L +F++M PN+ T V AC+R ++ C M+HA IK V V T +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ C+ V A ++F++MPER+ T N ML+G+ ++G D A LF +
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM 144
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 33/207 (15%)
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
K+C+ ++ +H+ +K F S+ F+ + ++M+ KC S+
Sbjct: 60 KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSV---------------- 103
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
D A ++F+ MP + ++ M+ G Q+ +A +F++M +
Sbjct: 104 ---------------DYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE 148
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
+ P+ +T+M +I + S + +HA+ I+L VD V V+ + Y C + A+
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAK 208
Query: 254 RLFDKMP--ERNLVTCNVMLNGYSKTG 278
+F+ + +R +V+ N M YS G
Sbjct: 209 LVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 135 CNIMISGYVKAGQLDNACQLFDIMP--GKGCVSYTTMIKGLVQNDCFGEALEVFKD---M 189
N IS Y K G LD+A +F+ + + VS+ +M K FGEA + F M
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAY---SVFGEAFDAFGLYCLM 247
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ + P+ T +N+ ++C + R+IH+ AI L D + + Y
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
AR LFD M R V+ VM++GY++ G +D A LF
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 106 SLINMYAKCGSIS-----DARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
SLI+ K GS+ DAR C + + CN +I Y K G + A +FD P
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Query: 161 KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI 214
K V++TTMI G N F EAL++F M+ PN +T + V+ AC+ G +
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSL 475
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 111/218 (50%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
K C+ + G+Q H+ + GF TF+ N L+ +Y A ++F P+ D
Sbjct: 55 FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDV 114
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS N MI+GY K+ + A F++MP + VS+ +M+ G +QN +++EVF DM +
Sbjct: 115 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 174
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ + T ++ CS + IH + +++ D V+ ++ L+ Y E+
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
R+F +PE+N V+ + ++ G + L+ +A + F+ +
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 20/229 (8%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLL-- 123
E S LK+C+ S G +IHS +K G SN+ + SLI+MY+KCG I +A +
Sbjct: 483 EFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 124 --FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
FQ V +G ++ ++ + + CVS+ ++I G V + +
Sbjct: 542 RFFQRANV---------------SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSED 586
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
A +F MM + P+ T V+ C+ + IHA IK + V + + L+
Sbjct: 587 AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVD 646
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
Y C + ++R +F+K R+ VT N M+ GY+ G + A +LFER+
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 695
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 43/262 (16%)
Query: 53 FCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYA 112
F Q N + S L+SC+++S G Q+H+ ALK F ++ ++ + ++MYA
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 113 KCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKG 172
KC ++ DA++LF DN+ L SY MI G
Sbjct: 328 KCDNMQDAQILF------------------------DNSENL-------NRQSYNAMITG 356
Query: 173 LVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL 232
Q + +AL +F +MS + ++++L V AC+ + I+ LAIK ++
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG--------LVDMAR 284
V V+ + Y C + EA R+FD+M R+ V+ N ++ + + G V M R
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 285 ELFERIPDKDVISWGTMIDSYT 306
E PD+ ++G+++ + T
Sbjct: 477 SRIE--PDE--FTFGSILKACT 494
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK CS + S G QIH + +++G ++ ++L++MYAK
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK------------------- 227
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+ + ++F +P K VS++ +I G VQN+ AL+ FK+M
Sbjct: 228 ------------GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNLMHAYCLCSGVG 250
+ + +V+ +C+ E+ +HA A+K A DG+V +T + Y C +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT--LDMYAKCDNMQ 333
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+A+ LFD N + N M+ GYS+ A LF R+
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL 373
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 60/265 (22%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E++L ++C+ + S+G QI+ LA+K + + N+ I+MY KC ++++A +F
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D VS N +I+ + + G KG E L +
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNG------------------------KGY-------ETLFL 470
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F M+ + P++ T +++ AC+ G + IH+ +K + V +L+ Y
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 246 CSGVGEARRL----------------FDKMPERNL----VTCNVMLNGYSKTGLVDMARE 285
C + EA ++ +KM + L V+ N +++GY + A+
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 286 LFERI------PDKDVISWGTMIDS 304
LF R+ PDK ++ T++D+
Sbjct: 590 LFTRMMEMGITPDK--FTYATVLDT 612
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
V C++ G + + HA I V L+ Y A +FDKMP R+
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+V+ N M+NGYSK+ + A F +P +DV+SW +M+ Y Q
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQ 157
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 33/246 (13%)
Query: 37 IKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
I+ S+ +P+ +F N + + + ++ LKSCS S G +H +AL+ G
Sbjct: 97 IRGYSISDEPERAFSVF-NQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSG 155
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
F T ++N+LI+ Y CG ISDAR ++FD
Sbjct: 156 FMVFTDLRNALIHFYCVCGKISDAR-------------------------------KVFD 184
Query: 157 IMPGK-GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIW 215
MP V+++T++ G +Q AL++F+ M VV N TL++ +SA S G++
Sbjct: 185 EMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS 244
Query: 216 NCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
H L IK+ +D + + T L+ Y G+ ARR+FD +++VT N M++ Y+
Sbjct: 245 GAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYA 304
Query: 276 KTGLVD 281
KTGL++
Sbjct: 305 KTGLLE 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L+S L + S + S H L +K+G + + +LI MY K G IS AR +F
Sbjct: 230 LLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
D V+ N MI Y K G L+ E + + +
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLE-------------------------------ECVWLLRQ 318
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHAL--AIKLAVDGLVLVSTNLMHAYCLC 246
M + + PN T + ++S+C+ + R + L ++A+D ++ T L+ Y
Sbjct: 319 MKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDA--ILGTALVDMYAKV 376
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
+ +A +F++M ++++ + M++GY GL A LF ++ +++
Sbjct: 377 GLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEEN 424
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 151 ACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSR 210
A +F+ + + TMI+G +D A VF + + + + + + + +CSR
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 211 FGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-NLVTCNV 269
+ +H +A++ + L+H YC+C + +AR++FD+MP+ + VT +
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 270 MLNGYSKTGLVDMARELFERIPDKDVI 296
++NGY + +A +LF + +V+
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVV 224
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 27/232 (11%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
A+K+CSS+ G+Q H A G+ S+ F+ ++LI MY+ CG + DAR +F P +
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
VS MI GY G +A LF + L V ++
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLF-------------------------KDLLVDENDDD 176
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC--SGV 249
D++ + + L++VISACSR IH+ IK D V V L+ AY GV
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTM 301
AR++FD++ +++ V+ N +++ Y+++G+ + A E+F R+ V+++ +
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAEC-----ELALV 70
R + E+P ++ W I+ L + + +F + +N + + LV
Sbjct: 131 RKVFDEIPKRNIVSWTSM---IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS--ISDARLLFQACP 128
S + +CS + + IHS +K GF + N+L++ YAK G ++ AR +F
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
D VS N ++S Y ++G + EA EVF+
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSN-------------------------------EAFEVFRR 276
Query: 189 MMSDSVVP-NDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
++ + VV N +TL V+ A S G + + IH I++ ++ V+V T+++ YC C
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
V AR+ FD+M +N+ + M+ GY G A ELF + D V
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 147 QLDNACQLFDIMPGKGCV-SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
+ N LF+ K V S+ ++I L ++ EAL F M S+ P + I
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
ACS +I++ + H A + VS+ L+ Y C + +AR++FD++P+RN+V
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 266 TCNVMLNGYSKTGLVDMARELFE 288
+ M+ GY G A LF+
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFK 166
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 42/189 (22%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ L + L + S + G+ IH +++G + + S+I+MY KCG + AR
Sbjct: 288 ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR----- 342
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ FD M K S+T MI G + +ALE+F
Sbjct: 343 --------------------------KAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFG---EIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
M+ V PN +T ++V++ACS G E W R +A+ + V+ L H
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGW--RWFNAMKGRFGVE------PGLEHYG 428
Query: 244 CLCSGVGEA 252
C+ +G A
Sbjct: 429 CMVDLLGRA 437
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 35/239 (14%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L SA++SC G H LALK GF S+ ++ +SL+ +Y
Sbjct: 122 GLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRD-------------- 167
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
+G+++NA ++F+ MP + VS+T MI G Q L+++
Sbjct: 168 -----------------SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYS 210
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M + PND T ++SAC+ G + R +H + + + + +S +L+ YC C
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+ +A R+FD+ +++V+ N M+ GY++ GL A ELFE + K GT D+ T
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKS----GTKPDAIT 325
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 114/291 (39%), Gaps = 78/291 (26%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
E+P ++ W I + C++++ R+ + + + L +C+
Sbjct: 180 EMPERNVVSWTAM---ISGFAQEWRVDICLKLYSKMRKSTSDPN-DYTFTALLSACTGSG 235
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
+ QGR +H L +G S I NSLI+MY KCG + DA +F D VS N MI+
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
GY + G A +LF++M M P+ +T
Sbjct: 296 GYAQHGLAMQAIELFELM------------------------------MPKSGTKPDAIT 325
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM- 259
+ V+S+C HA +K E R+ F+ M
Sbjct: 326 YLGVLSSCR-----------HAGLVK------------------------EGRKFFNLMA 350
Query: 260 -----PERNLVTCNVMLNGYSKTGLVDMARELFERIPDK-DVISWGTMIDS 304
PE N +C V L G + GL+ A EL E +P K + + WG+++ S
Sbjct: 351 EHGLKPELNHYSCLVDLLG--RFGLLQEALELIENMPMKPNSVIWGSLLFS 399
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 34/229 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ + S L C I + GR +H L++K+G +T + N+L++MYAKC DA+
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAK----- 397
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
YV F++ K V++ ++I G QN EAL +F
Sbjct: 398 ---------------YV-----------FEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA--VDGLVLVSTNLMHAYC 244
M S+SV PN +T+ ++ SAC+ G + +HA ++KL V V T L+ Y
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
C AR +FD + E+N +T + M+ GY K G + ELFE + K
Sbjct: 492 KCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 132/294 (44%), Gaps = 36/294 (12%)
Query: 2 LVLISASFRFRIVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQN 61
LV + F + R + ++P P W ++ L ++ ++++ +H
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLW---KVMLRCYCLNKESVEVVKLYDLLMKHGF 138
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
+ ++ ALK+C+ + G++IH +K+ N + L++MYAKC
Sbjct: 139 RYD-DIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKC------- 189
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
G++ +A ++F+ + + V +T+MI G V+ND E
Sbjct: 190 ------------------------GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
L +F M ++V+ N+ T +I AC++ + + H +K ++ + T+L+
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
Y C + ARR+F++ +LV M+ GY+ G V+ A LF+++ ++
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 32/253 (12%)
Query: 52 IFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMY 111
+ N + N E + + +C+ +S+ QG+ H +K G ++ + SL++MY
Sbjct: 228 VLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMY 287
Query: 112 AKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIK 171
KCG + NA ++F+ V +T MI
Sbjct: 288 VKCG-------------------------------DISNARRVFNEHSHVDLVMWTAMIV 316
Query: 172 GLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDG 231
G N EAL +F+ M + PN +T+ +V+S C + R +H L+IK+ +
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD 376
Query: 232 LVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP 291
V+ L+H Y C +A+ +F+ E+++V N +++G+S+ G + A LF R+
Sbjct: 377 -TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 292 DKDVISWGTMIDS 304
+ V G + S
Sbjct: 436 SESVTPNGVTVAS 448
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L C++I S RQ H + G + I L+++Y G DARL+F P D
Sbjct: 51 LSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+M+ Y + +L+D++ M
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLL-------------------------------MKH 136
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL-AVDGLVLVSTNLMHAYCLCSGVGE 251
+D+ + AC+ ++ N + IH +K+ + D +VL T L+ Y C +
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL--TGLLDMYAKCGEIKS 194
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI----SWGTMI 302
A ++F+ + RN+V M+ GY K L + LF R+ + +V+ ++GT+I
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 33/150 (22%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGF--HSNTFIQNSLINMYAKCGSISDARLLF 124
+ + S +C+S+ S + G +H+ ++KLGF S+ + +L++ YAKCG ARL+F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ ++ + MI GY K Q D G +LE
Sbjct: 504 DTIEEKNTITWSAMIGGYGK------------------------------QGDTIG-SLE 532
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEI 214
+F++M+ PN+ T +++SAC G +
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMV 562
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 41/242 (16%)
Query: 57 RQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS 116
R +P + V LK+C+ I S+G+Q+H +K GF + ++ N LI++Y CG
Sbjct: 144 RGESSPDKHTFPFV--LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
LD A ++FD MP + VS+ +MI LV+
Sbjct: 202 -------------------------------LDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK-----LAVDG 231
+ AL++F++M S P+ T+ +V+SAC+ G + HA ++ +A+D
Sbjct: 231 GEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD- 288
Query: 232 LVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP 291
VLV +L+ YC C + A ++F M +R+L + N M+ G++ G + A F+R+
Sbjct: 289 -VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 292 DK 293
DK
Sbjct: 348 DK 349
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQN-DCFGEALEVFKDMMS-DSVVPNDLTLMNVI 205
++ A ++FD + + T+I+ + EA +++ M+ P+ T V+
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
AC+ + +H +K G V V+ L+H Y C + AR++FD+MPER+LV
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 266 TCNVMLNGYSKTGLVDMARELFERI 290
+ N M++ + G D A +LF +
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREM 243
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 39/215 (18%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECE-LALVSALK 74
R + E+P +L+ W I A + +++F R+ Q E + + S L
Sbjct: 206 RKVFDEMPERSLVSW---NSMIDALVRFGEYDSALQLF---REMQRSFEPDGYTMQSVLS 259
Query: 75 SCSSISSPSQGRQIHSLALK---LGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
+C+ + S S G H+ L+ + + ++NSLI MY KCGS+ A +FQ D
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
S N MI G+ G+ + A FD M K
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDK-----------------------------R 350
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
++V PN +T + ++ AC+ G + R + ++
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR 385
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 35/253 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA------------ 120
LKS S + GR +H+ LK ++F++ SL++MYAK G + A
Sbjct: 133 LKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIK 192
Query: 121 -----------------------RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDI 157
LF++ P + S + +I GYV +G+L+ A QLF++
Sbjct: 193 KESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 158 MPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC 217
MP K VS+TT+I G Q + A+ + +M+ + PN+ T+ V+SACS+ G + +
Sbjct: 253 MPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
IH + + + T L+ Y C + A +F M +++++ M+ G++
Sbjct: 313 IRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVH 372
Query: 278 GLVDMARELFERI 290
G A + F ++
Sbjct: 373 GRFHQAIQCFRQM 385
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 35/174 (20%)
Query: 169 MIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA 228
+I+GL +N F ++ F M+ V P+ LT V+ + S+ G W R +HA +K
Sbjct: 97 LIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF 156
Query: 229 VD-----------------------------------GLVLVSTNLMHAYCLCSGVGEAR 253
VD +L+ L++ YC + A
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMAT 216
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
LF MPERN + + ++ GY +G ++ A++LFE +P+K+V+SW T+I+ ++Q
Sbjct: 217 TLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQ 270
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 40/200 (20%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + + L +CS + G +IH L G + I +L++MYAKCG
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG---------- 342
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+LD A +F M K +S+T MI+G + F +A++
Sbjct: 343 ---------------------ELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEI-----WNCRMIHALAIKLAVDGLVLVSTNLM 240
F+ MM P+++ + V++AC E+ + M AI+ + VLV L
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441
Query: 241 HAYCLCSGVGEARRLFDKMP 260
A + EA L + MP
Sbjct: 442 RA----GKLNEAHELVENMP 457
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 5/277 (1%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+ NP +L IK SL+ P + F + + A+ E LKSCSS+S
Sbjct: 62 IQNPNVL---VFNAMIKCYSLVGPPLESLSFFSSMKSRGIWAD-EYTYAPLLKSCSSLSD 117
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
G+ +H ++ GFH I+ ++ +Y G + DA+ +F + V N+MI G
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
+ +G ++ LF M + VS+ +MI L + EALE+F +M+ P++ T+
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAV-DGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
+ V+ + G + + IH+ A + + V L+ YC + A +F KM
Sbjct: 238 VTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
RN+V+ N +++G + G + +LF+ + ++ ++
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA 334
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 149 DNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG------EALEVFKDMMSDSVVPNDLTLM 202
D A ++F + + + MIK C+ E+L F M S + ++ T
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIK------CYSLVGPPLESLSFFSSMKSRGIWADEYTYA 106
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER 262
++ +CS ++ + +H I+ L + ++ Y +G+A+++FD+M ER
Sbjct: 107 PLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSER 166
Query: 263 NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
N+V N+M+ G+ +G V+ LF+++ ++ ++SW +MI S ++
Sbjct: 167 NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSK 211
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+++C+ + G Q+H + ++ GF ++ +Q LI++YA+ G + +F + P D
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
V M++ + G + A +LF+ MP + +++ MI G Q EAL VF M +
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V N + +++V+SAC++ G + R H+ + + V ++T L+ Y C + +A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+F M E+N+ T + LNG + G + ELF
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELF 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS--DSVVPNDLTLMNVI 205
LD A Q+ D + +MI+ ++ ++ + ++ ++S + + P++ T+ ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
AC+ +H + I+ D V T L+ Y + ++F+ +P + V
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 266 TCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
M+ ++ G V AR+LFE +P++D I+W MI Y Q
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQ 217
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 33/147 (22%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+A++S L +C+ + + QGR HS + + +L+++YAKCG
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD---------- 290
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA-LEV 185
++ A ++F M K ++++ + GL N FGE LE+
Sbjct: 291 ---------------------MEKAMEVFWGMEEKNVYTWSSALNGLAMNG-FGEKCLEL 328
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFG 212
F M D V PN +T ++V+ CS G
Sbjct: 329 FSLMKQDGVTPNAVTFVSVLRGCSVVG 355
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 32/223 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+KS + ISS +G++IH++ +KLGF S+ ++ NSLI++Y K G DA +F+ P D
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS N MISGY+ G D F +L +FK+M+
Sbjct: 197 VSWNSMISGYLALG------------------------------DGFS-SLMLFKEMLKC 225
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD-GLVLVSTNLMHAYCLCSGVGE 251
P+ + M+ + ACS + IH A++ ++ G V+V T+++ Y V
Sbjct: 226 GFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 285
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
A R+F+ M +RN+V NVM+ Y++ G V A F+++ +++
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+GR IH A++ GF + ++ +LI+MY +CG
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECG---------------------------- 379
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
QL +A +FD M K +S+ ++I VQN ALE+F+++ S+VP+ T+ +
Sbjct: 380 ---QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
++ A + + R IHA +K ++ +L+H Y +C + +AR+ F+ + ++
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERI 290
+V+ N ++ Y+ G ++ LF +
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEM 523
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 35/239 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDARLLFQ 125
+ +SAL +CS + SP G++IH A++ + + + S+++MY+K G +S A +F
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ V+ N+MI Y + G++ +A F M +
Sbjct: 292 GMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ------------------------ 327
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ + P+ +T +N++ A + I R IH A++ +++ T L+ Y
Sbjct: 328 ------NGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
C + A +FD+M E+N+++ N ++ Y + G A ELF+ + D ++ T I S
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 98 HSNTFIQNSLINMYAKCGSISDARLL----FQACPVLDPVSCNIMISGYVKAGQLDNACQ 153
H T +N N+ G ARL+ ++ ++ + + G+ + +++A Q
Sbjct: 26 HQTTGKRNGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQ 85
Query: 154 LFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGE 213
LFD M + MIKG + EA++ + M+ V + T VI + +
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 214 IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNG 273
+ + IHA+ IKL V V +L+ Y +A ++F++MPER++V+ N M++G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 274 YSKTG 278
Y G
Sbjct: 206 YLALG 210
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 50/202 (24%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+ S L + + S S+GR+IH+ +K + SNT I NSL++MYA CG + DAR F
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE-ALEVFK 187
+ D VS N +I Y G FG ++ +F
Sbjct: 494 LKDVVSWNSIIMAYAVHG--------------------------------FGRISVWLFS 521
Query: 188 DMMSDSVVPNDLTLMNVISACSRFG---EIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
+M++ V PN T ++++ACS G E W ++ + +D + H C
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGMVDEGWE--YFESMKREYGID------PGIEHYGC 573
Query: 245 LCSGVGE------ARRLFDKMP 260
+ +G A+R ++MP
Sbjct: 574 MLDLIGRTGNFSAAKRFLEEMP 595
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 10 RFRIVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQ---HQNPAECE 66
R R R L E+P L W I P+ I F R+ H N
Sbjct: 157 RLRDDARKLFDEIPERNLETW---NAFISNSVTDGRPREAIEAFIEFRRIDGHPN----S 209
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ + L +CS + G Q+H L L+ GF ++ + N LI+ Y KC I + ++
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII--- 266
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
F M K VS+ +++ VQN +A ++
Sbjct: 267 ----------------------------FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
D V +D + +V+SAC+ + R IHA A+K V+ + V + L+ Y C
Sbjct: 299 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
+ ++ + FD+MPE+NLVT N ++ GY+ G VDMA LFE + +
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALK-LGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
AL LK+ S SS GR +H+ +K L F+ N LINMY+K ARL+ +
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR- 66
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ P + VS+T++I GL QN F AL F
Sbjct: 67 ------------------------------LTPARNVVSWTSLISGLAQNGHFSTALVEF 96
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+M + VVPND T A + + IHALA+K V V + YC
Sbjct: 97 FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT 156
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+AR+LFD++PERNL T N ++ G A E F
Sbjct: 157 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 60/237 (25%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ + S L +C+ ++ GR IH+ A+K F+ ++L++MY KCG I D+ F
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
P + V+ N +I GY GQ+D A LF+ M +GC
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC---------------------- 407
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
PN +T ++++SACSR G + N + I ++ + H C+
Sbjct: 408 -------GPTPNYMTFVSLLSACSRAGAVEN-----GMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS-WGTM 301
+G A G+V+ A E +++P + IS WG +
Sbjct: 456 VDMLGRA-------------------------GMVERAYEFIKKMPIQPTISVWGAL 487
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 32/226 (14%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
A K+ +S+ P G+QIH+LA+K CG I D +F C D
Sbjct: 114 AFKAVASLRLPVTGKQIHALAVK-------------------CGRILD---VFVGCSAFD 151
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
Y K D+A +LFD +P + ++ I V + EA+E F +
Sbjct: 152 M---------YCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
PN +T ++ACS + + +H L ++ D V V L+ Y C +
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
+ +F +M +N V+ ++ Y + + A L+ R KD++
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR-SRKDIVE 307
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 39/240 (16%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
A+ S L++C + + G+ IH+ ALK G ++Q L+ +Y++ G I A+ F
Sbjct: 106 AVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDI 165
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
+ VS N ++ GY+++G+LD A ++FD +P K VS+ +I + G A +F
Sbjct: 166 AEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLF- 224
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
+ M + S S WN L+ Y C
Sbjct: 225 ------------SAMPLKSPAS-----WNI---------------------LIGGYVNCR 246
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ AR FD MP++N V+ M++GY+K G V A ELF + KD + + MI YTQ
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 87/148 (58%)
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
G S+ +++ L Q+ F E ++V+ DM + + P+ + +V+ AC + + + +
Sbjct: 66 GHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKP 125
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
IHA A+K + G V V T L+ Y + A++ FD + E+N V+ N +L+GY ++G
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 280 VDMARELFERIPDKDVISWGTMIDSYTQ 307
+D AR +F++IP+KD +SW +I SY +
Sbjct: 186 LDEARRVFDKIPEKDAVSWNLIISSYAK 213
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 125/244 (51%), Gaps = 7/244 (2%)
Query: 51 RIFCNARQHQNPAECELALVSALKSCSSISSPSQG--RQIHSLALKLGFHSNTFIQNSLI 108
R F R+ P + K+C++ + + +H AL+ G S+ F N+LI
Sbjct: 101 RFFVEMRRRSVPPDFH-TFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLI 159
Query: 109 NMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTT 168
+Y+ I A LF P D V+ N++I G VKA ++ A +LFD MP + VS+ +
Sbjct: 160 RVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNS 219
Query: 169 MIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA--IK 226
+I G Q + EA+++F +M++ + P+++ +++ +SAC++ G+ + IH +
Sbjct: 220 LISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKR 279
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
L +D ++T L+ Y C + A +F+ ++ L T N M+ G + G ++ +
Sbjct: 280 LFIDS--FLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDY 337
Query: 287 FERI 290
F ++
Sbjct: 338 FRKM 341
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 87 QIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAG 146
Q H+ + G SN F QNS+ A +LF + S + + Y
Sbjct: 22 QFHAQFITSGRISNDFKQNSVF-----------ANVLFAITSISPSASASKEVVSY---- 66
Query: 147 QLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG-EALEVFKDMMSDSVVPNDLTLMNVI 205
A +F + + T+I+ ++ + F +M SV P+ T V
Sbjct: 67 ----ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVF 122
Query: 206 SACS--RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
AC+ + G++ + +H A++ + + L+ Y L + + A +LFD+ P+R+
Sbjct: 123 KACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRD 182
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+VT NV+++G K + ARELF+ +P +D++SW ++I Y Q
Sbjct: 183 VVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQ 226
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 95/248 (38%), Gaps = 80/248 (32%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+A+VS L +C+ +G+ IH + ++F+ L++ YAKCG I A +F+
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
C + N MI+G G G+ V Y F
Sbjct: 310 CSDKTLFTWNAMITGLAMHGN------------GELTVDY-------------------F 338
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ M+S + P+ +T ++V+ CS G
Sbjct: 339 RKMVSSGIKPDGVTFISVLVGCSHSGL--------------------------------- 365
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGY-------SKTGLVDMARELFERIPD-----KD 294
V EAR LFD+M R+L N + Y + GL++ A E+ E++P +
Sbjct: 366 --VDEARNLFDQM--RSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 295 VISWGTMI 302
+++W ++
Sbjct: 422 LLAWSGLL 429
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 31/216 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+K+ ++++ G IHS+ ++ GF S ++QNSL+++YA CG ++
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA-------------- 173
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+A ++FD MP K V++ ++I G +N EAL ++ +M S
Sbjct: 174 -----------------SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 216
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ P+ T+++++SAC++ G + + +H IK+ + + S L+ Y C V EA
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ LFD+M ++N V+ ++ G + G A ELF+
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDM-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
+ T+I+G + A ++++M +S V P+ T +I A + ++ IH++
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
I+ L+ V +L+H Y C V A ++FDKMPE++LV N ++NG+++ G + A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 285 ELFERIPDKDVISWGTMIDS 304
L+ + K + G I S
Sbjct: 208 ALYTEMNSKGIKPDGFTIVS 227
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 32/147 (21%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+VS L +C+ I + + G+++H +K+G N N L+++YA+C
Sbjct: 223 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC------------ 270
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
G+++ A LFD M K VS+T++I GL N EA+E+F
Sbjct: 271 -------------------GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 187 KDMMS-DSVVPNDLTLMNVISACSRFG 212
K M S + ++P ++T + ++ ACS G
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCG 338
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L++C I ++G+++H ++ G+ + + N+LI MY KCG + ARLLF P D
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+S N MISGY + G C E LE+F M
Sbjct: 263 ISWNAMISGYFENGM----CH---------------------------EGLELFFAMRGL 291
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
SV P+ +TL +VISAC G+ R IHA I + V +L Y EA
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
+LF +M +++V+ M++GY L D A + + R+ D+D +
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVK 395
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ L S + +C + GR IH+ + GF + + NSL MY GS +A LF
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D VS MISGY ++ +P K A++ +
Sbjct: 358 MERKDIVSWTTMISGYE-----------YNFLPDK--------------------AIDTY 386
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ M DSV P+++T+ V+SAC+ G++ +H LAIK + V+V+ NL++ Y C
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNG 273
+ +A +F +P +N+++ ++ G
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAG 473
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 35/226 (15%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ + + L +C+++ G ++H LA+K S + N+LINMY+KC I
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI-------- 449
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGL-VQNDCFGEALE 184
D A +F +P K +S+T++I GL + N CF EAL
Sbjct: 450 -----------------------DKALDIFHNIPRKNVISWTSIIAGLRLNNRCF-EAL- 484
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
+F M ++ PN +TL ++AC+R G + + IHA ++ V + L+ Y
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C + A F+ ++++ + N++L GYS+ G M ELF+R+
Sbjct: 545 RCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRM 589
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM-SDSV 194
N ++ +V+ G L +A +F M + S+ ++ G + F EA+ ++ M+ V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P+ T V+ C ++ + +H ++ + + V L+ Y C V AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 255 LFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
LFD+MP R++++ N M++GY + G+ ELF
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G++IH+ L+ G + F+ N+L++MY +CG ++ A F + D S NI+++GY +
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSE 575
Query: 145 AGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
GQ +LFD M +++ +++ G ++ + L F M V PN
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKH 635
Query: 201 LMNVISACSRFGEI 214
V+ R GE+
Sbjct: 636 YACVVDLLGRAGEL 649
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
+ N++I+ Y + G++ +AR LF P D +S N ++ GY G ++ ++FD MP +
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSD-SVVPNDLTLMNVISACSRFGEIWNCRMIH 221
S+ +IKG QN E L FK M+ + SVVPND T+ V+SAC++ G + +H
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 222 ALAIKLAVDGL-VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLV 280
L + + V V L+ Y C + A +F + R+L++ N M+NG + G
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 281 DMARELFERI------PDK 293
A LF + PDK
Sbjct: 272 TEALNLFHEMKNSGISPDK 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 65/243 (26%)
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDA 120
P + + LV L +C+ + + G+ +H LG++ + ++N+LI+MY KCG+I A
Sbjct: 186 PNDATMTLV--LSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
+F+ D +S N MI+G G
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGHGT------------------------------- 272
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
EAL +F +M + + P+ +T + V+ AC G L DGL ++
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMG--------------LVEDGLAYFNSMFT 318
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK-DVISWG 299
F MPE + C +++ S+ G + A E ++P K D + W
Sbjct: 319 D--------------FSIMPE--IEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWA 362
Query: 300 TMI 302
T++
Sbjct: 363 TLL 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 229 VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
V+ V++ T++++ Y L + ARR FD PER++V N M++GY + G + AR LF+
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 289 RIPDKDVISWGTMIDSYTQ 307
++P +DV+SW T+++ Y
Sbjct: 115 QMPCRDVMSWNTVLEGYAN 133
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+++ ++ Y + EAR LFD+MP R++++ N +L GY+ G ++ +F+ +P+
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 293 KDVISWGTMIDSYTQ 307
++V SW +I Y Q
Sbjct: 150 RNVFSWNGLIKGYAQ 164
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMID 303
CL + A ++F +M E+N+V M+NGY + AR F+ P++D++ W TMI
Sbjct: 39 CLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMIS 98
Query: 304 SYTQ 307
Y +
Sbjct: 99 GYIE 102
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 37/230 (16%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ +VS L+ C P + IH + ++ G+ SN +SLI+ Y C + DA +
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD 387
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ D VSC+ MISG AG+ D A +F C
Sbjct: 388 SMTYKDVVSCSTMISGLAHAGRSDEAISIF----------------------CH------ 419
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNLMHAY 243
M D+ PN +T++++++ACS ++ + H +AI+ LA++ + V T+++ AY
Sbjct: 420 ----MRDT--PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIND-ISVGTSIVDAY 472
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
C + ARR FD++ E+N+++ V+++ Y+ GL D A LF+ + K
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQK 522
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 136/279 (48%), Gaps = 37/279 (13%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECE-LALVSALK 74
R L E+ ++ W I++ ++P +++F H+ E + + + S LK
Sbjct: 179 RKLFDEMSERDVISW---SVVIRSYVQSKEPVVGLKLF-KEMVHEAKTEPDCVTVTSVLK 234
Query: 75 SCSSISSPSQGRQIHSLALKLGFH-SNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
+C+ + GR +H +++ GF ++ F+ NSLI+MY+
Sbjct: 235 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYS--------------------- 273
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
K +D+A ++FD + VS+ +++ G V N + EALE+F M+ ++
Sbjct: 274 ----------KGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
V +++T+++++ C F + C+ IH + I+ + + ++L+ AY CS V +A
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+ D M +++V+C+ M++G + G D A +F + D
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD 422
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF-IQN 105
I IFC+ R N + ++S L +CS + + H +A++ N +
Sbjct: 411 DEAISIFCHMRDTPNA----ITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGT 466
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG--- 162
S+++ YAKCG+I AR F + +S ++IS Y G D A LFD M KG
Sbjct: 467 SIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTP 526
Query: 163 -CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI 214
V+Y + + L +FK M+ + P+ ++ SR GEI
Sbjct: 527 NAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEI 579
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 122 LLFQACPVLDPV-SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
++F+AC L + N + Y+K G L + + FD M + VS+ ++ GL+
Sbjct: 50 IVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEE 109
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIW-NCRMIHALAIKLAVDGLVLVSTNL 239
E L F + PN TL+ VI AC +W + IH I+ G+ V ++
Sbjct: 110 EGLWWFSKLRVWGFEPNTSTLVLVIHACR---SLWFDGEKIHGYVIRSGFCGISSVQNSI 166
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ Y + AR+LFD+M ER++++ +V++ Y ++ + +LF+ +
Sbjct: 167 LCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM 216
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 65/240 (27%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
LV + +C S+ G +IH ++ GF + +QNS++ MYA S+S
Sbjct: 130 LVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS---------- 177
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
A +LFD M + +S++ +I+ VQ+ L++FK+
Sbjct: 178 ----------------------ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKE 215
Query: 189 MMSDSVV-PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M+ ++ P+ +T+ +V+ AC+ +I R +H +I
Sbjct: 216 MVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSI---------------------- 253
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
RR FD ++ CN +++ YSK VD A +F+ ++++SW +++ +
Sbjct: 254 -----RRGFDLA---DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH 305
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L + L SC+ S +GR++H A+++G + N+LI Y+K + L++
Sbjct: 286 FTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEM 345
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D V+ MI+ Y+ G +D+A ++F + K ++Y ++ G +N +AL++F
Sbjct: 346 MMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLF 405
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
DM+ V D +L + + AC E IH IK + T L+ C
Sbjct: 406 TDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRC 465
Query: 247 SGVGEARRLFDKMPERNLVTCNV---MLNGYSKTGLVDMARELFER 289
+ +A +FD+ P NL + ++ GY++ GL D A LF R
Sbjct: 466 ERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHR 510
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 35/288 (12%)
Query: 20 LELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSI 79
+ L +PT++ + I S L +++F R+ E V+ L +C +
Sbjct: 138 VSLSSPTVVSYTAL---ISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRV 194
Query: 80 SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAK--CGSISDARLLFQACPVLDPVSCNI 137
S S G QIH L +K GF ++ F+ NSL+++Y K S D LF P D S N
Sbjct: 195 SRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNT 254
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
++S VK G+ A LF M N G ++ F
Sbjct: 255 VVSSLVKEGKSHKAFDLFYEM-----------------NRVEGFGVDSF----------- 286
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD 257
TL ++S+C+ + R +H AI++ + + V+ L+ Y + + L++
Sbjct: 287 --TLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYE 344
Query: 258 KMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
M ++ VT M+ Y G+VD A E+F + +K+ I++ ++ +
Sbjct: 345 MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGF 392
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
N +IS Y+K G A +F + VSYT +I G + + EAL+VF M +V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 196 -PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG--EA 252
PN+ T + +++AC R IH L +K V VS +LM Y SG +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+LFD++P+R++ + N +++ K G A +LF + + G +DS+T
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVE----GFGVDSFT 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 32/232 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ +L SA+ +C +S QIH +K G N IQ +L++M +C ++DA +F
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 126 ACPV-LDPVSCNI-MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEAL 183
P LD +I GY + G D A LF
Sbjct: 477 QWPSNLDSSKATTSIIGGYARNGLPDKAVSLFH--------------------------- 509
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+ + + ++++L +++ C G IH A+K + + +L+ Y
Sbjct: 510 ---RTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMY 566
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C +A ++F+ M E ++++ N +++ Y D A L+ R+ +K++
Sbjct: 567 AKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEI 618
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 54/116 (46%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
P + +F Q E++L L C ++ G QIH ALK G+ S+ + N
Sbjct: 501 PDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN 560
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK 161
SLI+MYAKC DA +F D +S N +IS Y+ D A L+ M K
Sbjct: 561 SLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEK 616
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 31/221 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L+ C ++G++IH+ +GF N +++ L+ +YA G + A +LF++ + D
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDL 174
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+ N MISGYV+ KGL Q E L ++ DM +
Sbjct: 175 IPWNAMISGYVQ--------------------------KGLEQ-----EGLFIYYDMRQN 203
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+VP+ T +V ACS + + + HA+ IK + ++V + L+ Y CS +
Sbjct: 204 RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDG 263
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
R+FD++ RN++T +++GY G V + FE++ ++
Sbjct: 264 HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
Q + I+ + RQ++ + + S ++CS++ G++ H++ +K SN + ++
Sbjct: 191 QEGLFIYYDMRQNRIVPD-QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSA 249
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC--- 163
L++MY KC S SD +F + ++ +ISGY G++ + F+ M +GC
Sbjct: 250 LVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPN 309
Query: 164 -VSYTTMIKGLVQNDCFGEALEVFKDMMSD-SVVPNDLTLMNVISACSRFGEI 214
V++ ++ + E F M D + P ++ R G +
Sbjct: 310 PVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 32/240 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E L SA+K+CS + GR H + + GF N FI ++L +Y DAR
Sbjct: 163 EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR---- 218
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
++FD MP + +T ++ +ND + EAL +
Sbjct: 219 ---------------------------RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGL 251
Query: 186 FKDM-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
F M +VP+ T V++AC + + IH I + V+V ++L+ Y
Sbjct: 252 FYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYG 311
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
C V EAR++F+ M ++N V+ + +L GY + G + A E+F + +KD+ +GT++ +
Sbjct: 312 KCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKA 371
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 49 CIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLI 108
IRI + + PA +L S L++C+ + S G Q H+ +K G ++ + NSL+
Sbjct: 45 AIRILNSTHSSEIPATPKL-YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 109 NMYAKCG-SISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYT 167
++Y K G + + R +F V D +S+T
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKD-------------------------------AISWT 132
Query: 168 TMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL 227
+M+ G V +ALEVF +M+S + N+ TL + + ACS GE+ R H + I
Sbjct: 133 SMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITH 192
Query: 228 AVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ +S+ L + Y + +ARR+FD+MPE +++ +L+ +SK L + A LF
Sbjct: 193 GFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF 252
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 38/275 (13%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
E+P P ++ W L ++ + +F + + + L +C ++
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEE---ALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
QG++IH + G SN +++SL++MY KCGS+ +AR +F + VS + ++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
GY + G+ + A ++F M K CFG
Sbjct: 340 GYCQNGEHEKAIEIFREMEEKDLY-------------CFG-------------------- 366
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
V+ AC+ + + IH ++ G V+V + L+ Y + A R++ KM
Sbjct: 367 --TVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
RN++T N ML+ ++ G + A F + K +
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
SP+ + +H+ L+ GF T+ N + +Y K GS+ +A LF P + ++ N+ +
Sbjct: 19 SPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLK 78
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
G K G L+NA LFD MP + VS+ TMI GLV + VF DM + P + T
Sbjct: 79 GLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFT 138
Query: 201 --LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK 258
++ + C R GE +H +CSGV
Sbjct: 139 FSILASLVTCVRHGE-------------------------QIHGNAICSGV--------- 164
Query: 259 MPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
NLV N +++ Y + G+ D A +F + D+DV+SW +I
Sbjct: 165 -SRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLI 207
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 48/222 (21%)
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
P E +++V ++ CS + S+G+Q +L +K+GF SN+ + + I+M++KC + D+
Sbjct: 233 PDEYTVSMVVSI--CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSV 290
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
LF+ D V CN MI Y C GE
Sbjct: 291 KLFRELEKWDSVLCNSMIGSY--------------------------------SWHCCGE 318
Query: 182 -ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM------IHALAIKLAVDGLVL 234
AL +F M+ SV P+ T +V+S+ N M +H+L IKL D
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSSM-------NAVMLDHGADVHSLVIKLGFDLDTA 371
Query: 235 VSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
V+T+LM Y V A +F K ++L+ N ++ G ++
Sbjct: 372 VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR 413
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 32/130 (24%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
G +HSL +KLGF +T + SL+ MY
Sbjct: 353 HGADVHSLVIKLGFDLDTAVATSLMEMY-------------------------------F 381
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM-MSDSVVPNDLTLM 202
K G +D A +F GK + + T+I GL +N E+L +F + M+ S+ P+ +TLM
Sbjct: 382 KTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLM 441
Query: 203 NVISACSRFG 212
++ AC G
Sbjct: 442 GILVACCYAG 451
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 38/231 (16%)
Query: 47 QHCIRIFCNARQHQ-NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGF-HSNTFIQ 104
++ IR+F + ++ + P E +++++L +C G QIH A+ G N +
Sbjct: 118 EYGIRVFFDMQRWEIRPTEFTFSILASLVTC-----VRHGEQIHGNAICSGVSRYNLVVW 172
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV 164
NS+++MY + G D A +F M + V
Sbjct: 173 NSVMDMYRRLGV-------------------------------FDYALSVFLTMEDRDVV 201
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
S+ +I + AL+ F M + P++ T+ V+S CS E+ + AL
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
IK+ +V + + C+ + ++ +LF ++ + + V CN M+ YS
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+ ++ F R N E AL C+ + + S ++H +K GF +N+
Sbjct: 276 EDVLKYFHLMRMSGNAVSGE-ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNA 334
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP------- 159
LI++Y K G + DA LF+ S N +I+ +V AG+LD A LF +
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 160 -GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
V++T++IKG ++LE F+ M V+ N +T+ ++S C+ + R
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGR 454
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
IH I+ ++ +LV L++ Y C + E +F+ + +++L++ N ++ GY G
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 279 LVDMARELFERI 290
+ A +F+R+
Sbjct: 515 FAEKALSMFDRM 526
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 111/243 (45%), Gaps = 14/243 (5%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L++C + R H+ +++G N + N L+ +Y K G + DA LF PV +
Sbjct: 165 LRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNR 224
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKD 188
+S N+MI G+ + ++A ++F+ M + V++T+++ Q F + L+ F
Sbjct: 225 MSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHL 284
Query: 189 M-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M MS + V + L S C+ + +H IK + + L+H Y
Sbjct: 285 MRMSGNAVSGE-ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQG 343
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD--------KDVISWG 299
V +A LF ++ + + + N ++ + G +D A LF + + +V++W
Sbjct: 344 KVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWT 403
Query: 300 TMI 302
++I
Sbjct: 404 SVI 406
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 31/148 (20%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L C+ + + + GR+IH ++ N +QN+L+NMYAKCG +S+ L+F+A D
Sbjct: 441 LSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDL 500
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+S N +I GY G + A +FD M+S
Sbjct: 501 ISWNSIIKGYGMHGFAEKALSMFD-------------------------------RMISS 529
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMI 220
P+ + L+ V+SACS G + R I
Sbjct: 530 GFHPDGIALVAVLSACSHAGLVEKGREI 557
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 81 SPSQGRQIHSLAL--KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIM 138
+ Q RQ+H+ L F S + N LI++YA+ G + DAR +F+ ++
Sbjct: 68 TAQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLV-------- 118
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPND 198
L + +L++ +++K V + + ALE+++ M + +
Sbjct: 119 ---------LLSDLRLWN-----------SILKANVSHGLYENALELYRGMRQRGLTGDG 158
Query: 199 LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK 258
L ++ AC G CR H I++ + + V L+ Y +G+A LF +
Sbjct: 159 YILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVE 218
Query: 259 MPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
MP RN ++ NVM+ G+S+ + A ++FE + + D ++W +++ ++Q
Sbjct: 219 MPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN-DCFGEALEVFKDMMSDSV 194
N +++ Y KAG++ +A LF MP + +S+ MIKG Q DC A+++F+ M +
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC-ESAVKIFEWMQREEF 255
Query: 195 VPNDLTLMNVIS---ACSRFGEIW----------NCRMIHALAIKLAV--DGLVLVSTNL 239
P+++T +V+S C +F ++ N ALA+ +V + L
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWG 299
+H Y + G E +P RN +++ Y K G V A LF +I +K + SW
Sbjct: 316 VHGYVIKGGFEEY------LPSRN-----ALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 300 TMIDSYT 306
++I S+
Sbjct: 365 SLITSFV 371
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
EL P ++ W + P + F + + L++ + +C+ +S
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNG---SPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
+ GR +H ++ GF ++ + NSL+N YAK + +A
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA-------------------- 217
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
LF ++ K +S++T+I VQN EAL VF DMM D PN T
Sbjct: 218 -----------VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
++ V+ AC+ ++ R H LAI+ ++ V VST L+ Y C EA +F ++P
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELF 287
+++V+ +++G++ G+ + E F
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEF 353
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L++C++ QGR+ H LA++ G + + +L++MY KC S +A +F P D
Sbjct: 271 LQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDV 330
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS +ISG+ G + + F IM ++ +
Sbjct: 331 VSWVALISGFTLNGMAHRSIEEFSIM------------------------------LLEN 360
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ P+ + ++ V+ +CS G + + H+ IK D + +L+ Y C +G A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
++F+ + ++ V ++ GY G A E F +
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 458
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 70/295 (23%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNA-RQHQNPAECELALVSALK 74
R + E+ +L +W +K+ S + + + F + R + P L + ALK
Sbjct: 14 RQMFGEMTKRSLYQW---NTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV--ALK 68
Query: 75 SCSSISSPSQGRQIHSLALK-LGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
+C + + G IH K + S+ ++ +SLI MY KCG
Sbjct: 69 ACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCG------------------ 110
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM-MSD 192
++ A ++FD + V++++M+ G +N +A+E F+ M M+
Sbjct: 111 -------------RMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS 157
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V P+ +TL+ ++SAC++ R +H I
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI--------------------------- 190
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
RR F +L N +LN Y+K+ A LF+ I +KDVISW T+I Y Q
Sbjct: 191 RRGFSN----DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 40/230 (17%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+P ++ WV I +L I F N + +V L SCS +
Sbjct: 325 IPRKDVVSWVAL---ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
Q + HS +K GF SN FI SL+ +Y++CGS+ +A +F + D V +I+G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM-SDSVVPNDLT 200
Y + GKG +ALE F M+ S V PN++T
Sbjct: 442 YG--------------IHGKGT-----------------KALETFNHMVKSSEVKPNEVT 470
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
++++SACS G I I KL V+ L + NL H L +G
Sbjct: 471 FLSILSACSHAGLIHEGLRI----FKLMVNDYRL-APNLEHYAVLVDLLG 515
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 150 NACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACS 209
+A Q+F M + + T++K L + + E L F M D P++ TL + AC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 210 RFGEIWNCRMIHALAIKLAVDGLVL-VSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCN 268
E+ MIH K G L V ++L++ Y C + EA R+FD++ + ++VT +
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 269 VMLNGYSKTGLVDMARELFERI 290
M++G+ K G A E F R+
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRM 153
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 42/281 (14%)
Query: 46 PQHCIRIFCN-ARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQ 104
P+ + ++ ++ +P V LK+CS + S G H ++ GF N +++
Sbjct: 93 PEKTVSLYTEMEKRGVSPDRYTFTFV--LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVK 150
Query: 105 NSLI-------------------------------NMYAKCGSISDARLLFQACPVLDPV 133
N+LI + YAK G I +A LF P D V
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
+ N+MI+G +K ++D+A +LFD K V++ MI G V EAL +FK+M
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA-VDGLVLVSTNLMHA----YCLCSG 248
P+ +T+++++SAC+ G++ + +H ++ A V + V T + +A Y C
Sbjct: 271 EHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGS 330
Query: 249 VGEARRLFDKMPERNLVTCNVMLNG---YSKTGLVDMAREL 286
+ A +F + +R+L T N ++ G + G ++M E+
Sbjct: 331 IDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEMFEEM 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 146 GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
G L A +LFD +P +++G Q+ + + ++ +M V P+ T V+
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 206 SACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNLMHAYC------------------- 244
ACS+ N H ++ ++ V + L HA C
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 245 ----LCSG------VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
+ SG + EA RLFD+MP ++ V NVM+ G K +D ARELF+R +KD
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 295 VISWGTMIDSY 305
V++W MI Y
Sbjct: 240 VVTWNAMISGY 250
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 43/215 (20%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG-----FHSN 100
P+ + IF R + + ++S L +C+ + G+++H L+ +
Sbjct: 256 PKEALGIFKEMRDAGEHPDV-VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVG 314
Query: 101 TFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
T I N+LI+MYAKC G +D A ++F +
Sbjct: 315 TPIWNALIDMYAKC-------------------------------GSIDRAIEVFRGVKD 343
Query: 161 KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMI 220
+ ++ T+I GL + G ++E+F++M V PN++T + VI ACS G + R
Sbjct: 344 RDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKY 402
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
+L + + + N+ H C+ +G A +L
Sbjct: 403 FSL-----MRDMYNIEPNIKHYGCMVDMLGRAGQL 432
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 40/270 (14%)
Query: 37 IKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
I + S + P IR+F Q + E ++ S L S + + G+Q+H LK G
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTD-EFSVCSLL---SVLDCLNLGKQVHGYTLKSG 480
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
+ + +SL +Y+KCGS+ ++ LFQ P DNAC
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK------------------DNAC---- 518
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
+ +MI G + EA+ +F +M+ D P++ TL V++ CS +
Sbjct: 519 ---------WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR 569
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
+ IH ++ +D + + + L++ Y C + AR+++D++PE + V+C+ +++GYS+
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
Query: 277 TGLVDMARELFERIPDKDVISWGTMIDSYT 306
GL+ LF +D++ G +DS+
Sbjct: 630 HGLIQDGFLLF-----RDMVMSGFTMDSFA 654
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 64/247 (25%)
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA 120
+P E LA V L CSS S +G++IH L+ G + ++L+NMY+KCGS+ A
Sbjct: 548 SPDESTLAAV--LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
R ++ P LDPVSC+ +ISGY + GL+Q
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQ--------------------------HGLIQ----- 634
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
+ +F+DM+ + + +++ A + E +HA K+ +
Sbjct: 635 DGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL----------- 683
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGT 300
C VG + +L YSK G +D + F +I D+I+W
Sbjct: 684 ---CTEPSVGSS-----------------LLTMYSKFGSIDDCCKAFSQINGPDLIAWTA 723
Query: 301 MIDSYTQ 307
+I SY Q
Sbjct: 724 LIASYAQ 730
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 71/266 (26%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
+ F+ SL++ Y+ GS++DA LF P D VSCNIMISGY + + + + F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 160 GKGC----VSYTTMIKG-----------------------------------LVQNDCFG 180
G +SY ++I +N F
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 181 EALEVFKDMMSDSVV-------------------------------PNDLTLMNVISACS 209
+A +VF+D +S +V P+ T +V++AC+
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 210 RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNV 269
++ +++ A IK + V V T ++ Y C + EA +F ++P ++V+ V
Sbjct: 263 SLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 270 MLNGYSKTGLVDMARELFERIPDKDV 295
ML+GY+K+ A E+F+ + V
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGV 347
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 37/223 (16%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L +C+S+ G+ + + +K G + F+ +++++YAKCG +++A +F P
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNP 314
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
VS +M+SGY K+ ND F ALE+FK+M
Sbjct: 315 SVVSWTVMLSGYTKS------------------------------NDAF-SALEIFKEMR 343
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
V N+ T+ +VISAC R + +HA K V+ L+ Y +
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 251 EARRLF---DKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ ++F D + +N+V NVM+ +S++ A LF R+
Sbjct: 404 LSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRM 444
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 55/280 (19%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+PNP+++ W + + D + IF R H + S + +C S
Sbjct: 311 IPNPSVVSWTVM---LSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSM 366
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS----CNI 137
+ Q+H+ K GF+ ++ + +LI+MY+K G I + +F+ LD + N+
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED---LDDIQRQNIVNV 423
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
MI+ + ++ + PGK A+ +F M+ + + +
Sbjct: 424 MITSFSQSKK-----------PGK--------------------AIRLFTRMLQEGLRTD 452
Query: 198 DLTLMNVISA--CSRFGEIWNCRMIHALAIKLAVDGLVL---VSTNLMHAYCLCSGVGEA 252
+ ++ +++S C G + +H +K GLVL V ++L Y C + E+
Sbjct: 453 EFSVCSLLSVLDCLNLG-----KQVHGYTLK---SGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+LF +P ++ M++G+++ G + A LF + D
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%)
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
I A LL + D ++S Y +G + +A +LFD +P VS MI G Q+
Sbjct: 69 ILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
F E+L F M N+++ +VISACS ++ IK+ +V
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNG 273
+ L+ + +A ++F N+ N ++ G
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS---ISDARLL 123
L S L + +S+ GRQ H +K GFH N+ + + LI+ Y+KCG + D+ +
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 124 FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEAL 183
FQ D V N MISGY +L EA+
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSE------------------------------EAV 330
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAV-DGLVLVSTNLMHA 242
+ F+ M P+D + + V SACS C+ IH LAIK + + V+ L+
Sbjct: 331 KSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISL 390
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
Y + +AR +FD+MPE N V+ N M+ GY++ G A L++R+ D +
Sbjct: 391 YYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 8/223 (3%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G+ +H+L +K S+T++ N +N+Y+KCG +S AR F + + S N+++ Y K
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
++ A QLFD +P VSY T+I G A+ +FK M + TL +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE-RN 263
I+AC ++ + +H ++ D V+ + Y + EA +F M E R+
Sbjct: 147 IAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
V+ N M+ Y + A L+ K++I G ID +T
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALY-----KEMIFKGFKIDMFT 242
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 45/200 (22%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQD-PQHCIRIFCNARQHQN----PAECELALVSALKS 75
E+ +P L+ W I S+ ++ + ++ F RQ Q P +C V++ +
Sbjct: 303 EILSPDLVVW---NTMISGYSMNEELSEEAVKSF---RQMQRIGHRPDDCSFVCVTS--A 354
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTF-IQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
CS++SSPSQ +QIH LA+K SN + N+LI++Y K G++ DAR +F P L+ VS
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
N MI GY + G EAL +++ M+ +
Sbjct: 415 FNCMIKGYAQHGHGT-------------------------------EALLLYQRMLDSGI 443
Query: 195 VPNDLTLMNVISACSRFGEI 214
PN +T + V+SAC+ G++
Sbjct: 444 APNKITFVAVLSACAHCGKV 463
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
+ F+D++ SV DL + + +HAL +K V +S + ++
Sbjct: 8 FKTFRDLLLKSVAERDL---------------FTGKSLHALYVKSIVASSTYLSNHFVNL 52
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
Y C + AR F E N+ + NV++ Y+K + +AR+LF+ IP D +S+ T+I
Sbjct: 53 YSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLI 112
Query: 303 DSYT 306
Y
Sbjct: 113 SGYA 116
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 37/213 (17%)
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
K+C ++ GR +H +K G F+ +SL +MY KCG
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV----------------- 223
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
LD+A ++FD +P + V++ ++ G VQN EA+ +F DM
Sbjct: 224 --------------LDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVL---VSTNLMHAYCLCSGVG 250
V P +T+ +SA + G + + HA+AI V+G+ L + T+L++ YC +
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAI---VNGMELDNILGTSLLNFYCKVGLIE 326
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
A +FD+M E+++VT N++++GY + GLV+ A
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDA 359
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ L + + + + + G+++ ++ F S+ + +++++MYAKCGSI DA+ +F +
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 127 CPVLDPVSCNIMISGYVKAG-----------------------------------QLDNA 151
D + N +++ Y ++G Q+D A
Sbjct: 436 TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEA 495
Query: 152 CQLFDIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+F M G + S+TTM+ G+VQN C EA+ + M + PN ++ +SA
Sbjct: 496 KDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Query: 208 CSRFGEIWNCRMIHALAIK-LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVT 266
C+ + R IH I+ L LV + T+L+ Y C + +A ++F L
Sbjct: 556 CAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 267 CNVMLNGYSKTGLVDMARELFERI 290
N M++ Y+ G + A L+ +
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSL 639
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 126/264 (47%), Gaps = 44/264 (16%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+ IR+F + R+ Q + + + L + +++ +G+Q H++A+ G + + S
Sbjct: 256 EEAIRLFSDMRK-QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS 314
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNA---CQLFDIMPGKGC 163
L+N Y K G I A ++F D V+ N++ISGYV+ G +++A CQL +
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK---- 370
Query: 164 VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHAL 223
++ DC +TL ++SA +R + + +
Sbjct: 371 ----------LKYDC--------------------VTLATLMSAAARTENLKLGKEVQCY 400
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
I+ + + +++++ +M Y C + +A+++FD E++L+ N +L Y+++GL A
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 284 RELF-----ERIPDKDVISWGTMI 302
LF E +P +VI+W +I
Sbjct: 461 LRLFYGMQLEGVP-PNVITWNLII 483
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 43/230 (18%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLG--FHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
L+ C S G+QIH+ LK G + N +I+ L+ YAKC ++ A +LF V
Sbjct: 77 LQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR 136
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
+ S +I VK C++ GL + G F +M+
Sbjct: 137 NVFSWAAIIG--VK-------CRI-----------------GLCEGALMG-----FVEML 165
Query: 191 SDSVVPNDLTLMNVISAC-----SRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ + P++ + NV AC SRFG R +H +K ++ V V+++L Y
Sbjct: 166 ENEIFPDNFVVPNVCKACGALKWSRFG-----RGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C + +A ++FD++P+RN V N ++ GY + G + A LF + + V
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV 270
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 103/248 (41%), Gaps = 38/248 (15%)
Query: 52 IFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF-IQNSLINM 110
+F Q ++ AL +C+ ++S GR IH ++ HS+ I+ SL++M
Sbjct: 532 LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDM 591
Query: 111 YAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMI 170
YAKCG I+ A +F + + N MIS Y G L A L+ + G G
Sbjct: 592 YAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG-------- 643
Query: 171 KGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD 230
+ P+++T+ NV+SAC+ G+I I +
Sbjct: 644 -----------------------LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSM 680
Query: 231 GLVLVSTNLMHAYCLCSGVGE-ARRLFDKMP----ERNLVTCNVMLNGYSKTGLVD-MAR 284
L LM +G E A RL ++MP R + + N KT LVD ++R
Sbjct: 681 KPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSR 740
Query: 285 ELFERIPD 292
+L E P+
Sbjct: 741 KLLESEPE 748
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 31/204 (15%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G IHS+ ++ GF S ++QNSL+++YA CG ++
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA-------------------------- 40
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
+A ++FD MP K V++ ++I G +N EAL ++ +M S + P+ T++++
Sbjct: 41 -----SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 95
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+SAC++ G + + +H IK+ + + S L+ Y C V EA+ LFD+M ++N
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 265 VTCNVMLNGYSKTGLVDMARELFE 288
V+ ++ G + G A ELF+
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFK 179
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 32/147 (21%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+VS L +C+ I + + G+++H +K+G N N L+++YA+C
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC------------ 137
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
G+++ A LFD M K VS+T++I GL N EA+E+F
Sbjct: 138 -------------------GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 187 KDMMS-DSVVPNDLTLMNVISACSRFG 212
K M S + ++P ++T + ++ ACS G
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCG 205
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 210 RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNV 269
R GE IH++ I+ L+ V +L+H Y C V A ++FDKMPE++LV N
Sbjct: 5 RLGET-----IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 59
Query: 270 MLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
++NG+++ G + A L+ + K + G I S
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVS 94
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 39/223 (17%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+CS + G +H +K GF N ++ L++MY CG
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG----------------- 156
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+++ ++F+ +P V++ ++I G V N+ F +A+E F++M S+
Sbjct: 157 --------------EVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL--------VLVSTNLMHAYC 244
V N+ +++++ AC R +I + H L D V+++T+L+ Y
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
C + AR LFD MPER LV+ N ++ GYS+ G + A +F
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 49/241 (20%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHS--------NTFIQNSLINMYAKCGSI 117
E +V L +C G+ H LGF N + SLI+MYAKCG
Sbjct: 208 ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG-- 265
Query: 118 SDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQND 177
L A LFD MP + VS+ ++I G QN
Sbjct: 266 -----------------------------DLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 178 CFGEALEVFKDMMSDSVVPNDLTLMNVISA-----CSRFGEIWNCRMIHALAIKLAVDGL 232
EAL +F DM+ + P+ +T ++VI A CS+ G+ IHA K
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQ-----SIHAYVSKTGFVKD 351
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+ L++ Y A++ F+ + +++ + V++ G + G + A +F+R+ +
Sbjct: 352 AAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQE 411
Query: 293 K 293
K
Sbjct: 412 K 412
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+ +MI+G + +AL +++M+ P+ T V+ ACS +I +H +
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
K + + VST L+H Y C V R+F+ +P+ N+V +++G+ A E
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 286 LFERIPDKDV 295
F + V
Sbjct: 195 AFREMQSNGV 204
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 81/210 (38%), Gaps = 47/210 (22%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S ++ CS + G+ IH+ K GF + I +L+NMYAK G A+ F+
Sbjct: 327 SMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D ++ ++I G G + A +F M KG
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKG---------------------------- 413
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC---S 247
+ P+ +T + V+ ACS G + + A + L + + H C+ S
Sbjct: 414 --NATPDGITYLGVLYACSHIGLVEEGQRYFA-----EMRDLHGLEPTVEHYGCMVDILS 466
Query: 248 GVG---EARRLFDKMPER-NLVTCNVMLNG 273
G EA RL MP + N+ +LNG
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 19/277 (6%)
Query: 38 KAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGF 97
KA L ++ Q F A+ + + +V L+ CS+ ++GRQIH L+LG
Sbjct: 72 KAVELFREMQ-----FSGAKAYDS------TMVKLLQVCSNKEGFAEGRQIHGYVLRLGL 120
Query: 98 HSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDI 157
SN + NSLI MY++ G + +R +F + + S N ++S Y K G +D+A L D
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 158 MPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGE 213
M G V++ +++ G +A+ V K M + P+ ++ +++ A + G
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 214 IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNG 273
+ + IH ++ + V V T L+ Y + AR +FD M +N+V N +++G
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 274 YSKTGLVDMARELFERIPDK----DVISWGTMIDSYT 306
S L+ A L R+ + D I+W ++ Y
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 85 GRQIHSLALKLGF-HSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
G IH +K G +S+T + ++ + Y +C S+ A LF P D ++ N ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
++G + A +LF M G +Y D T++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAY-------------------------------DSTMVK 94
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
++ CS R IH ++L ++ V + +L+ Y + +R++F+ M +RN
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIP----DKDVISWGTMIDSYT 306
L + N +L+ Y+K G VD A L + + D+++W +++ Y
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYA 201
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 27/260 (10%)
Query: 70 VSALK-SCSSISSPSQ----------GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSIS 118
++ LK S SSISS Q G+ IH L+ + +++ +LI+MY K G +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 119 DARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLV 174
AR++F + V+ N ++SG A L +A L M +G +++ ++ G
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 175 QNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL-- 232
+AL+V M V PN ++ + S CS+ G N R + IK+ +G+
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG---NFRNALKVFIKMQEEGVGP 394
Query: 233 --VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV----TCNVMLNGYSKTGLVDMAREL 286
+ST L CL S + + + +NL+ +++ Y K+G + A E+
Sbjct: 395 NAATMSTLLKILGCL-SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 287 FERIPDKDVISWGTMIDSYT 306
F I +K + SW M+ Y
Sbjct: 454 FWGIKNKSLASWNCMLMGYA 473
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 65/298 (21%)
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
P E LV +K CS+ G +H L L++GF + + S ++ Y KC + AR
Sbjct: 108 PDEYTFPLV--MKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSAR 165
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLD-------------------------------N 150
+F P + VS ++ YVK+G+L+ N
Sbjct: 166 KVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVN 225
Query: 151 ACQLFDIMPGKGCVSYTTMIKGLVQN-------DCFGE---------------------- 181
A +LFD MP + +SYT+MI G + D F E
Sbjct: 226 AKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQP 285
Query: 182 --ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHA-LAIKLAVDGLVLVSTN 238
A +VF +M + +V P++ ++ ++SACS+ G C + + L ++ V
Sbjct: 286 NEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPA 345
Query: 239 LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
L+ C + A +LF++MP+R+LV+ M+ G + G A LFE++ D+ ++
Sbjct: 346 LIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIV 403
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 154 LFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV-PNDLTLMNVISACSRFG 212
+F+ +P G + +IKG F E + + MM + P++ T V+ CS G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 213 EIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLN 272
++ +H L +++ D V+V T+ + Y C + AR++F +MPERN V+ ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 273 GYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
Y K+G ++ A+ +F+ +P++++ SW ++D +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVK 219
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
K G +D A +LF+ MP + VSY +M++G+ + C EA+ +F+ M+ + +VP+++
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTV 411
Query: 204 VISAC--SRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC---LCSGVG---EARRL 255
++ C SR E R + K + +L S + H C L S G EA L
Sbjct: 412 ILKVCGQSRLVEE-GLRYFELMRKKYS----ILASPD--HYSCIVNLLSRTGKLKEAYEL 464
Query: 256 FDKMP-ERNLVTCNVMLNGYSKTGLVDM----ARELFERIP 291
MP E + +L G S G ++ AR LFE P
Sbjct: 465 IKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEP 505
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 31/225 (13%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LK+C+ + +GRQ+H L++KLG N ++ +LINMY +C + AR +F ++
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDR--IV 191
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
+P V Y MI G + + EAL +F++M
Sbjct: 192 EPC-----------------------------VVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ PN++TL++V+S+C+ G + + IH A K + V V+T L+ + C +
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLD 282
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+A +F+KM ++ + M+ Y+ G + + +FER+ ++V
Sbjct: 283 DAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 151 ACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK---DMMSDSVVPNDLTLMNVISA 207
A LF+ M V + +M +G + F LEVF +++ D ++P++ T +++ A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTC 267
C+ + R +H L++KL +D V V L++ Y C V AR +FD++ E +V
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 268 NVMLNGYSKTGLVDMARELFERIPDK 293
N M+ GY++ + A LF + K
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGK 224
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 33/231 (14%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ L+S L SC+ + S G+ IH A K F + +LI+M+AKCGS+ DA +F+
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE 289
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D + + MI Y G+ + +++ +
Sbjct: 290 KMRYKDTQAWSAMIVAYANHGKAE-------------------------------KSMLM 318
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI-KLAVDGLVLVSTNLMHAYC 244
F+ M S++V P+++T + +++ACS G + R + + K + + +++
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 245 LCSGVGEARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
+ +A DK+P + ++L S +D+A ++ ERI + D
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELD 429
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 43/280 (15%)
Query: 54 CNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAK 113
CN R C LK+CS + GR+IH A K+G S F+ N L++MY K
Sbjct: 134 CNVRPDHYTFPC------VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGK 187
Query: 114 CGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQ-------------------- 153
CG +S+ARL+ D VS N ++ GY + + D+A +
Sbjct: 188 CGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 154 -----------------LFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVP 196
+F M K VS+ MI ++N EA+E++ M +D P
Sbjct: 248 LPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 197 NDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLF 256
+ +++ +V+ AC + + IH + + +L+ L+ Y C + +AR +F
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 257 DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
+ M R++V+ M++ Y +G A LF ++ D ++
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 129 VLDPVSCN-----IMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEAL 183
+L+ + CN ++ Y + +A ++FD +P + + MI+ V N +GE +
Sbjct: 66 ILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGV 125
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+VF M +V P+ T V+ ACS G I R IH A K+ + + V L+ Y
Sbjct: 126 KVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMY 185
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
C + EAR + D+M R++V+ N ++ GY++ D A E+
Sbjct: 186 GKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 36/189 (19%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+++ S L +C S+ S G++IH + N ++N+LI+MYAKCG + AR +F+
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D VS MIS Y G+GC +A+ +F
Sbjct: 370 MKSRDVVSWTAMISAYG--------------FSGRGC-----------------DAVALF 398
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ +VP+ + + ++ACS G + R KL D ++ L H C+
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS----CFKLMTDHYK-ITPRLEHLACMV 453
Query: 247 SGVGEARRL 255
+G A ++
Sbjct: 454 DLLGRAGKV 462
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ L +A+ +C+ + + +G+QIH+ A GF S+ QN+L+ +Y++CG I ++ L F+
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D ++ N ++SG+ ++G + EAL V
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNE-------------------------------EALRV 679
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F M + + N+ T + + A S + + +HA+ K D V L+ Y
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAK 739
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C + +A + F ++ +N V+ N ++N YSK G A + F+++ +V
Sbjct: 740 CGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
A S L +C I S G Q+H L LKLGF S+T++
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV------------------------ 325
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
CN ++S Y G L +A +F M + V+Y T+I GL Q +A+E+FK
Sbjct: 326 -------CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M D + P+ TL +++ ACS G ++ + +HA KL + L++ Y C+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ A F + N+V NVML Y GL+D R F
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSF 475
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 62/240 (25%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L S + +CS+ + +G+Q+H+ KLGF SN I+ +L+N+YAKC I A F
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
V + V N+M+ Y G LD+ F I F+
Sbjct: 451 EVENVVLWNVMLVAY---GLLDDLRNSFRI----------------------------FR 479
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M + +VPN T +++ C R G++ IH+ IK TN
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK----------TNF-------- 521
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ N C+V+++ Y+K G +D A ++ R KDV+SW TMI YTQ
Sbjct: 522 -------------QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 7/184 (3%)
Query: 120 ARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF 179
AR+L+Q V CN +I Y + G +D A ++FD + K S+ MI GL +N+C
Sbjct: 211 ARILYQGLRD-STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNL 239
EA+ +F DM ++P +V+SAC + + +H L +KL V L
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI------PDK 293
+ Y + A +F M +R+ VT N ++NG S+ G + A ELF+R+ PD
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 294 DVIS 297
+ ++
Sbjct: 390 NTLA 393
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 64/236 (27%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
SA+K+ S ++ QG+Q+H++ K G+ S T + N+LI+MYAKCGSISDA F
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG-EALEVFKDM 189
+ VS N +I+ Y K G FG EAL+ F M
Sbjct: 757 NEVSWNAIINAYSKHG--------------------------------FGSEALDSFDQM 784
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ +V PN +TL+ V+SACS G LV + + + S
Sbjct: 785 IHSNVRPNHVTLVGVLSACSHIG---------------------LVDKGIAYFESMNSEY 823
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK-DVISWGTMIDS 304
G + + PE + +++ ++ GL+ A+E + +P K D + W T++ +
Sbjct: 824 GLSPK-----PEHYVCVVDML----TRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 39 APSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFH 98
A LL D ++ RIF Q + + S LK+C + G QIHS +K F
Sbjct: 464 AYGLLDDLRNSFRIF-RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 99 SNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIM 158
N ++ C+++I Y K G+LD A +
Sbjct: 523 LNAYV-------------------------------CSVLIDMYAKLGKLDTAWDILIRF 551
Query: 159 PGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
GK VS+TTMI G Q + +AL F+ M+ + +++ L N +SAC+ + +
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
IHA A + L+ Y C + E+ F++ + + N +++G+ ++G
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 279 LVDMARELFERIP----DKDVISWGTMIDSYTQ 307
+ A +F R+ D + ++G+ + + ++
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 61/227 (26%)
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
S +GR++HS LKLG SN + L + Y LF+
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFY-----------LFK--------------- 133
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
G L A ++FD MP + ++ MIK L + GE +F M+S++V PN+ T
Sbjct: 134 -----GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGT 188
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
V+ AC R G + A D +HA L G+ ++
Sbjct: 189 FSGVLEAC-RGGSV-------------AFD-----VVEQIHARILYQGLRDS-------- 221
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
V CN +++ YS+ G VD+AR +F+ + KD SW MI ++
Sbjct: 222 ---TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E S L SC ++ G+ IH L +K GF S Q SL+ MY +C +
Sbjct: 267 EYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV-------- 318
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D++ ++F + VS+T++I GLVQN AL
Sbjct: 319 -----------------------DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+ MM DS+ PN TL + + CS R IH + K D + L+ Y
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGK 415
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C AR +FD + E ++++ N M+ Y++ G A +LFER+
Sbjct: 416 CGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFH-SNTFIQNSLINMYAKCGSISDARLLF 124
E L S K+ S +S + ++ H LA+ LG SN F+ ++L++MY K G +A+L+
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
D V +I GY + G+ EA++
Sbjct: 225 DRVEEKDVVLITALIVGYSQKGE-------------------------------DTEAVK 253
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
F+ M+ + V PN+ T +V+ +C +I N ++IH L +K + + T+L+ Y
Sbjct: 254 AFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYL 313
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
CS V ++ R+F + N V+ +++G + G +MA F ++
Sbjct: 314 RCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 51/246 (20%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L SAL+ CS+++ +GRQIH + K GF + + + LI++Y KCG ARL+F
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT 428
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG-EALEV 185
+D +S N MI Y + G FG EAL++
Sbjct: 429 LSEVDVISLNTMIYSYAQNG--------------------------------FGREALDL 456
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIH---ALAIKLAVDGLVLVSTNLMHA 242
F+ M++ + PND+T+++V+ AC+ N R++ L D ++L + H
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACN------NSRLVEEGCELFDSFRKDKIMLTND---HY 507
Query: 243 YCLCSGVGEARRLFD------KMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
C+ +G A RL + ++ +LV +L+ V+MA + +I + +
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPG 567
Query: 297 SWGTMI 302
GT+I
Sbjct: 568 DEGTLI 573
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 120 ARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF 179
A +L P +S + ++ +K G +D A Q+FD M + V++ ++I L+++
Sbjct: 89 AHMLKSGFPA--EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRS 146
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD-GLVLVSTN 238
EA+E+++ M++++V+P++ TL +V A S + H LA+ L ++ V V +
Sbjct: 147 KEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSA 206
Query: 239 LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
L+ Y EA+ + D++ E+++V ++ GYS+ G A + F+
Sbjct: 207 LVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 256
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
+C+ + GR +HS K+G + I +SLI MYAKCG + AR
Sbjct: 141 ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYAR------------- 187
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
+LFD + + VS+ +MI G + +A+++F+ M +
Sbjct: 188 ------------------KLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGF 229
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P++ TL++++ ACS G++ R++ +AI + + + L+ Y C + ARR
Sbjct: 230 EPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARR 289
Query: 255 LFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+F++M +++ V M+ YS+ G A +LF
Sbjct: 290 VFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E LVS L +CS + GR + +A+ +TF+ + LI+MY K
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGK------------ 280
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
G LD+A ++F+ M K V++T MI QN EA ++
Sbjct: 281 -------------------CGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F +M V P+ TL V+SAC G + + I A +L++ + V+T L+ Y
Sbjct: 322 FFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGK 381
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFER--IPDKDVISWGTM 301
C V EA R+F+ MP +N T N M+ Y+ G A LF+R +P D+ G +
Sbjct: 382 CGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVL 439
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 5/194 (2%)
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSC-NIMISGYVKAGQLDNACQLFDIMPGK 161
++ + + KC S++ R + QA +L V N +I V+ G + + LF +
Sbjct: 36 LERDFLFLLKKCISVNQLRQI-QAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEP 94
Query: 162 GCVSYTTMIKGLVQ--NDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
S+ MI+GL ND AL +++ M + P+ T V AC++ EI R
Sbjct: 95 NHYSFNYMIRGLTNTWND-HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
+H+ K+ ++ V ++ +L+ Y C VG AR+LFD++ ER+ V+ N M++GYS+ G
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 280 VDMARELFERIPDK 293
A +LF ++ ++
Sbjct: 214 AKDAMDLFRKMEEE 227
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 35/193 (18%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L + L +C S+ + G+QI + A +L N ++ L++MY KCG + +A +F+A P
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
V + + N MI+ Y G A LFD M
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRM------------------------------ 426
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEI-WNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
SV P+D+T + V+SAC G + CR H ++ + + TN++
Sbjct: 427 ----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAG 482
Query: 248 GVGEARRLFDKMP 260
+ EA ++ P
Sbjct: 483 MLDEAWEFMERFP 495
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 45/244 (18%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LK+C+S+ S G IH L GF S+ +I +SL+N+YAK G ++ AR +F+
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRER 110
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D V MI Y +AG + AC L + M +G
Sbjct: 111 DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG---------------------------- 142
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ P +TL+ ++S EI + +H A+ D + V ++++ YC C VG
Sbjct: 143 ---IKPGPVTLLEMLSGVL---EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG 196
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI------PDKDVISW-----G 299
+A+ LFD+M +R++V+ N M++GY+ G + +L R+ PD+ G
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 300 TMID 303
TM D
Sbjct: 257 TMCD 260
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+PN ++ W I L + + +F Q + E A+ S + SC+ + S
Sbjct: 306 IPNKDVVCWTVM---ISGLMRLGRAEKALIVFSEMLQSGSDLSSE-AIASVVASCAQLGS 361
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
G +H L+ G+ +T NSLI MYAKCG + + ++F+ D VS N +ISG
Sbjct: 362 FDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISG 421
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
Y + L A LF+ M K + Q D F T+
Sbjct: 422 YAQNVDLCKALLLFEEMK----------FKTVQQVDSF--------------------TV 451
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
++++ ACS G + ++IH + I+ + LV T L+ Y C + A+R FD +
Sbjct: 452 VSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW 511
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERI 290
+++V+ +++ GY G D+A E++
Sbjct: 512 KDVVSWGILIAGYGFHGKGDIALEIYSEF 540
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 70 VSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
V+ L+ S + +Q + +H A+ GF + + NS++N+Y KC + DA+ LF
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
D VS N MISGY G + E L++ M
Sbjct: 208 RDMVSWNTMISGYASVGNMS-------------------------------EILKLLYRM 236
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
D + P+ T +S ++ RM+H +K D + + T L+ Y C
Sbjct: 237 RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKE 296
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ R+ + +P +++V VM++G + G + A +F +
Sbjct: 297 EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
GR +H +K GF + ++ +LI MY KCG + + + P D V +MISG ++
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
G+ + A +F E L+ D+ S+++ +V
Sbjct: 324 LGRAEKALIVFS------------------------EMLQSGSDLSSEAIA-------SV 352
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+++C++ G +H ++ +L+ Y C + ++ +F++M ER+L
Sbjct: 353 VASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDL 412
Query: 265 VTCNVMLNGYSKTGLVDMARE--LFERIPDKDVISWGTMIDSYT 306
V+ N +++GY++ VD+ + LFE + K V +DS+T
Sbjct: 413 VSWNAIISGYAQN--VDLCKALLLFEEMKFKTV----QQVDSFT 450
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+ + I L + + L F M+++ ++P+ T +++ AC+ + IH +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
+S++L++ Y + AR++F++M ER++V M+ YS+ G+V A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 84 QGRQIHSLALKLGFHSNTF-IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGY 142
+GR++H + G I N L+NMYAKCGSI+DAR
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR--------------------- 369
Query: 143 VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
++F M K VS+ +MI GL QN CF EA+E +K M ++P TL+
Sbjct: 370 ----------RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER 262
+ +S+C+ + IH ++KL +D V VS LM Y + E R++F MPE
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 263 NLVTCNVMLNGYSKT 277
+ V+ N ++ +++
Sbjct: 480 DQVSWNSIIGALARS 494
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D CN +I+ Y++ G +A ++FD MP + CVS+ ++ G +N EAL +DM+
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 191 SDSVVPNDLTLMNVISACSRFGE--IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
+ + N ++V+ AC G I R IH L KL+ +VS L+ Y C G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 249 -VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
VG A F + +N V+ N +++ YS+ G A +F
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-QACPVLDPVSCNIMISGYV 143
G+QIH LALK +N+LI Y KCG + +F + D V+ N MISGY
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY- 594
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+ N+ +AL++ M+ +
Sbjct: 595 ------------------------------IHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
V+SA + + +HA +++ ++ V+V + L+ Y C + A R F+ MP RN
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 264 LVTCNVMLNGYSKTGLVDMARELFE 288
+ N M++GY++ G + A +LFE
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFE 709
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 66 ELALVSALKSCSSISSPS--QGRQIHSLALKLGFHSNTFIQNSLINMYAKC-GSISDARL 122
+ A VS L++C I S GRQIH L KL + + + N LI+MY KC GS+ A
Sbjct: 102 QYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC 161
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
F V + VS N +IS Y +AG + A
Sbjct: 162 AFGDIEVKNSVSWNSIISVYSQAGDQRS-------------------------------A 190
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL---VLVSTNL 239
+F M D P + T ++++ E + R++ + + GL + V + L
Sbjct: 191 FRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP-DVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ A+ + AR++F++M RN VT N ++ G + + A +LF
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 21/251 (8%)
Query: 70 VSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
+ L + +S+++ +G ++H+ +++ S+ + ++L++MY+KCG + A F PV
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMP--GKGCVSYTTMIKGLVQNDCFGEALEVFK 187
+ S N MISGY + GQ + A +LF+ M G+ + T + L G E FK
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 188 --DMMSDS--VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+ MSDS + P + R GE+ + K+ + VL+ ++ A
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGEL---DKLEDFIEKMPMKPNVLIWRTVLGAC 799
Query: 244 CLCSG----VGE--ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV-- 295
C +G +G+ A LF PE N V ++ N Y+ G + + +++ D DV
Sbjct: 800 CRANGRKAELGKKAAEMLFQLEPE-NAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 296 ---ISWGTMID 303
SW TM D
Sbjct: 859 EAGYSWVTMKD 869
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L+S+L SC+S+ G+QIH +LKLG N + N+L+ +YA+ G +++ R +F +
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
P D VS N +I + S ++ + +V CF A
Sbjct: 476 MPEHDQVSWNSIIGALAR--------------------SERSLPEAVV---CFLNAQRAG 512
Query: 187 KDMMSDSVVPNDLTL--MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
+ + N +T + + FGE+ + IH LA+K + L+ Y
Sbjct: 513 QKL-------NRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIACYG 563
Query: 245 LCSGVGEARRLFDKMPE-RNLVTCNVMLNGYSKTGLVDMAREL 286
C + ++F +M E R+ VT N M++GY L+ A +L
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 31/222 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L SA KSC+ +S GR +H L++K G+ ++ F+ +SL++MYAKCG I AR
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR------- 171
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
++FD MP + V+++ M+ G Q EAL +FK+
Sbjct: 172 ------------------------KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
+ +++ ND + +VIS C+ + R IH L+IK + D V ++L+ Y C
Sbjct: 208 ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
A ++F+++P +NL N ML Y++ ELF+R+
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 36/225 (16%)
Query: 65 CELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF 124
C+L L SA ++ S+I +G Q+H +K G + N+LIN Y+K D+R
Sbjct: 19 CDLLLSSA-RTRSTI----KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSR--- 70
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ F+ P K +++++I QN+ +LE
Sbjct: 71 ----------------------------RAFEDSPQKSSTTWSSIISCFAQNELPWMSLE 102
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
K MM+ ++ P+D L + +C+ R +H L++K D V V ++L+ Y
Sbjct: 103 FLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYA 162
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFER 289
C + AR++FD+MP+RN+VT + M+ GY++ G + A LF+
Sbjct: 163 KCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 35/200 (17%)
Query: 13 IVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSA 72
+ R + E+P ++ W + + + + + + +F A +N A + + S
Sbjct: 168 VYARKMFDEMPQRNVVTW---SGMMYGYAQMGENEEALWLFKEA-LFENLAVNDYSFSSV 223
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+ C++ + GRQIH L++K F S++F+ +SL+++Y+KCG A +F PV +
Sbjct: 224 ISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNL 283
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
N M+ Y + S+T + +E+FK M
Sbjct: 284 GIWNAMLKAYAQH-------------------SHTQKV------------IELFKRMKLS 312
Query: 193 SVVPNDLTLMNVISACSRFG 212
+ PN +T +NV++ACS G
Sbjct: 313 GMKPNFITFLNVLNACSHAG 332
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 44 QDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFI 103
D +++F + Q + L + K+C + + +QG+Q+H+ A+K G+ + ++
Sbjct: 496 HDGHKTLKLFALMHK-QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 104 QNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC 163
+ +++MY KCG +S A+ F + PV D V+ MISG ++ G+ + A +F M G
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG- 613
Query: 164 VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHAL 223
V+P++ T+ + A S + R IHA
Sbjct: 614 ------------------------------VLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
A+KL V T+L+ Y C + +A LF ++ N+ N ML G ++ G
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 284 RELFERI------PDK 293
+LF+++ PDK
Sbjct: 704 LQLFKQMKSLGIKPDK 719
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 130/299 (43%), Gaps = 41/299 (13%)
Query: 21 ELPNPTLLRW--VXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSS 78
++P+ L+ W + + ++++ Q +F RQ + L LK C
Sbjct: 99 KMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ-DVVYTSRMTLSPMLKLCLH 157
Query: 79 ISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIM 138
H A K+G + F+ +L+N+Y K G + + ++LF+ P D V N+M
Sbjct: 158 SGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLM 217
Query: 139 ISGYVK--------------------------------AGQLDNACQLFDIMPGKGCVSY 166
+ Y++ +G +A Q+ G S
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSV 277
Query: 167 TTMI---KGL---VQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMI 220
+ +I KGL + + + L+ F DM+ V + +T + +++ + + + +
Sbjct: 278 SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQV 337
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
H +A+KL +D ++ VS +L++ YC G AR +FD M ER+L++ N ++ G ++ GL
Sbjct: 338 HCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 102 FIQNSLINMYAKCGSISDARLL-FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
F++N++ + G + AR+L F+ P + N +IS Y K G L A ++FD MP
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENP--ERFLINNLISMYSKCGSLTYARRVFDKMPD 102
Query: 161 KGCVSYTTMIKGLVQN-DCFGEALE----VFKDMMSDSVVPNDLTLMNVISACSRFGEIW 215
+ VS+ +++ Q+ +C E ++ +F+ + D V + +TL ++ C G +W
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 216 NCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
H A K+ +DG V+ L++ Y V E + LF++MP R++V N+ML Y
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 276 KTGLVDMAREL 286
+ G + A +L
Sbjct: 223 EMGFKEEAIDL 233
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 36/187 (19%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + + K+ S +++ QGRQIH+ ALKL ++ F+ SL++MYAKCGSI DA LF+
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 677
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+++ + N M+ G + G+ GK E L++
Sbjct: 678 RIEMMNITAWNAMLVGLAQHGE------------GK-------------------ETLQL 706
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
FK M S + P+ +T + V+SACS G + A ++ G + + H CL
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLV-----SEAYKHMRSMHGDYGIKPEIEHYSCL 761
Query: 246 CSGVGEA 252
+G A
Sbjct: 762 ADALGRA 768
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 34/237 (14%)
Query: 43 LQDPQHCIRIFCNARQHQNPAEC-ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNT 101
L Q+ + C A ++ EC ++ + L + + S + G+Q+H +ALKLG
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 102 FIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK 161
+ NSLINMY K AR +FD M +
Sbjct: 351 TVSNSLINMYCKLRKFGFAR-------------------------------TVFDNMSER 379
Query: 162 GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN-CRMI 220
+S+ ++I G+ QN EA+ +F ++ + P+ T+ +V+ A S E + + +
Sbjct: 380 DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 439
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
H AIK+ VST L+ AY + EA LF++ +LV N M+ GY+++
Sbjct: 440 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 39/239 (16%)
Query: 66 ELALVSALKSCSSISSP-SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF 124
+ + S LK+ SS+ S +Q+H A+K+ S++F+ +LI+ Y++ + +A +LF
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ FD+ V++ M+ G Q+ + L+
Sbjct: 476 ER--------------------------HNFDL------VAWNAMMAGYTQSHDGHKTLK 503
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
+F M +D TL V C I + +HA AIK D + VS+ ++ Y
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFER------IPDKDVIS 297
C + A+ FD +P + V M++G + G + A +F + +PD+ I+
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 234 LVSTNLMHAYCLCSGVGEARRL-FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+ S++LM C AR L F++ PER L+ N +++ YSK G + AR +F+++PD
Sbjct: 50 ITSSDLMLGKCT-----HARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPD 102
Query: 293 KDVISWGTMIDSYTQ 307
+D++SW +++ +Y Q
Sbjct: 103 RDLVSWNSILAAYAQ 117
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 115/225 (51%), Gaps = 5/225 (2%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKC---GSISDARLLFQAC 127
S LKSC+ + G +H ++LG + + N+L+NMYAK GS +F
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169
Query: 128 PVLDPVSCNIMISGY--VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
P S + + + +D+ ++F++MP K VSY T+I G Q+ + +AL +
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
++M + + P+ TL +V+ S + ++ + IH I+ +D V + ++L+ Y
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ + ++ R+F ++ R+ ++ N ++ GY + G + A LF ++
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+G++IH ++ G S+ +I +SL++MYAK I D+ +F Y
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL--------------YC 305
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+ G +S+ +++ G VQN + EAL +F+ M++ V P + +
Sbjct: 306 RDG-----------------ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSS 348
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
VI AC+ + + +H ++ + +++ L+ Y C + AR++FD+M +
Sbjct: 349 VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLD 408
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
V+ ++ G++ G A LFE + + V
Sbjct: 409 EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 34/152 (22%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+A S + +C+ +++ G+Q+H L+ GF SN FI ++L++MY+KCG+I AR +F
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
VLD VS +I G+ G A LF+ M +G
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG------------------------ 439
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFG---EIW 215
V PN + + V++ACS G E W
Sbjct: 440 -------VKPNQVAFVAVLTACSHVGLVDEAW 464
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 105 NSLINMYAKCGSISDARLL---FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK 161
+LI + S S A+ L F L S +I+IS Y L A LF +
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 162 GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACS-----RFGEIWN 216
+++ ++I+ F +AL F +M + P+ +V+ +C+ RFGE
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE--- 125
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG---EARRLFDKMPER---------NL 264
+H ++L +D + LM+ Y G+G +FD+MP+R
Sbjct: 126 --SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
TC +M G +D R +FE +P KDV+S+ T+I Y Q
Sbjct: 184 ETC-IMPFG------IDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 38/249 (15%)
Query: 50 IRIFCNARQ---HQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+R+F R+ H N + +SAL +CS +G+QIH+L K G S I+++
Sbjct: 241 LRLFSLMRRGLVHPN----SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
L++MY+KCGSI DA +F++ +D VS +++ G + G + A Q F
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF----------- 345
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
M++ V+ D V ++ S + N L L + +H+L IK
Sbjct: 346 IRMLQAGVEIDA-----NVVSAVLGVSFIDNSLGL---------------GKQLHSLVIK 385
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
G V+ L++ Y C + +++ +F +MP+RN V+ N M+ +++ G A +L
Sbjct: 386 RKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKL 445
Query: 287 FERIPDKDV 295
+E + +V
Sbjct: 446 YEEMTTLEV 454
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 31/205 (15%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKA 145
+ IH+LA+ G+ + N LI Y KCG C++ G
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCG-------------------CSVSGRG---- 211
Query: 146 GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
+FD M + ++ T +I GL++N+ + L +F M V PN +T ++ +
Sbjct: 212 --------VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSAL 263
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV 265
+ACS I + IHAL K ++ + + + LM Y C + +A +F+ E + V
Sbjct: 264 AACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Query: 266 TCNVMLNGYSKTGLVDMARELFERI 290
+ V+L G ++ G + A + F R+
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRM 348
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 50/258 (19%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSI-SSPSQGRQIHSLALKLGFHSNTFIQN 105
+ I+ F R Q E + +VSA+ S I +S G+Q+HSL +K F NTF+ N
Sbjct: 339 EEAIQFFI--RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNN 396
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
LINMY+KCG L ++ +F MP + VS
Sbjct: 397 GLINMYSKCG-------------------------------DLTDSQTVFRRMPKRNYVS 425
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+ +MI ++ AL+++++M + V P D+T ++++ ACS G I R + L
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL--LNE 483
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVG------EARRLFDKMPER-NLVTCNVMLNGYSKTG 278
V G + H C+ +G EA+ D +P + + +L S G
Sbjct: 484 MKEVHG---IEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Query: 279 LVDM----ARELFERIPD 292
++ A +LF+ PD
Sbjct: 541 DTEVGEYAAEQLFQTAPD 558
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 98 HSNTFI-QNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
H N + NSL+++YAKCG + DA LF P+ D +S NI+ G+++ + ++ L
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
M G G + TL V+S C
Sbjct: 146 RMLGSGGFDHA--------------------------------TLTIVLSVCDTPEFCLV 173
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
+MIHALAI D + V L+ +Y C R +FD M RN++T +++G +
Sbjct: 174 TKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIE 233
Query: 277 TGLVDMARELF 287
L + LF
Sbjct: 234 NELHEDGLRLF 244
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L S +K+ S S S G +H ALK GF + F+Q S + Y + G + +R +F
Sbjct: 87 LTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFD- 145
Query: 127 CPVLDP--VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+L+P V+CN ++ + G++D A + F MP VS+TT+I G + +AL
Sbjct: 146 -DILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALM 204
Query: 185 VFKDMMSDS---VVPNDLTLMNVISACSRF--GEIWNCRMIHALAIKLAVDGLVLVSTNL 239
VF +M+ + + PN+ T ++V+S+C+ F G I + IH + + + T L
Sbjct: 205 VFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTAL 264
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ Y + A +FD++ ++ + N +++ + G A E+FE
Sbjct: 265 LDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI-SACSRFGEIWNCRMIH 221
CV Y T+I+ + + +L +F M++ V PN+LT ++I +ACS F + + H
Sbjct: 52 CV-YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL-H 109
Query: 222 ALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVD 281
A+K V T+ + Y + +R++FD + +V CN +L+ + G +D
Sbjct: 110 GQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMD 169
Query: 282 MARELFERIPDKDVISWGTMIDSYTQ 307
A E F+R+P DV+SW T+I+ +++
Sbjct: 170 YAFEYFQRMPVTDVVSWTTVINGFSK 195
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
Y KAG L+ A +FD + K ++ +I L N +ALE+F+ M S V PN +TL
Sbjct: 268 YGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITL 327
Query: 202 MNVISACSR 210
+ +++AC+R
Sbjct: 328 LAILTACAR 336
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 49/272 (18%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS--ISDARLLFQACPVL 130
LK+CS S + +H+ KLG S+ ++ N+LI+ Y++CG + DA LF+
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D VS N M+ G VKAG+L +A +LFD MP + +S+ TM+ G + +A E+F+ M
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS-TNLMHAYCLCSGV 249
N ++ ++ S+ G++ M + K+ + +V+ T ++ Y +
Sbjct: 244 ER----NTVSWSTMVMGYSKAGDM---EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 250 GEARRLFDKMPER---------------------------------------NLVTCNVM 270
EA RL D+M N N +
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 271 LNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
L+ Y+K G + A ++F IP KD++SW TM+
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP--GKG 162
N++++ YA+C +S A LF+ P + VS + M+ GY KAG ++ A +FD MP K
Sbjct: 220 NTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHA 222
V++T +I G + EA + M++ + + ++++++AC+ G + IH+
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 223 LAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDM 282
+ + + V L+ Y C + +A +F+ +P+++LV+ N ML+G G
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKE 399
Query: 283 ARELFERI------PDK 293
A ELF R+ PDK
Sbjct: 400 AIELFSRMRREGIRPDK 416
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 37/176 (21%)
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIW--NCRMIHALA 224
++I+ QN +A VF +M + ++ T ++ ACS G+ W +M+H
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS--GQSWLPVVKMMHNHI 143
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVG---------------------------------E 251
KL + + V L+ Y C G+G +
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 203
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
ARRLFD+MP+R+L++ N ML+GY++ + A ELFE++P+++ +SW TM+ Y++
Sbjct: 204 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSK 259
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 47/279 (16%)
Query: 19 SLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSS 78
+ LP ++ W LL++ + + + A A++S L +C+
Sbjct: 272 KMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA----AVISILAACTE 327
Query: 79 ISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIM 138
S G +IHS+ + SN ++ N+L++MYAKCG+
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN---------------------- 365
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPND 198
L A +F+ +P K VS+ TM+ GL + EA+E+F M + + P+
Sbjct: 366 ---------LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 199 LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG------EA 252
+T + V+ +C+ G I + +++ + + + H CL +G EA
Sbjct: 417 VTFIAVLCSCNHAGLI-----DEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEA 471
Query: 253 RRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFERI 290
++ MP E N+V +L VD+A+E+ + +
Sbjct: 472 IKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNL 510
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 123/291 (42%), Gaps = 82/291 (28%)
Query: 95 LGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQL 154
LGF + N +N + G I++AR +F+ + V+ N MISGYVK +++ A +L
Sbjct: 38 LGFRAT----NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 155 FDIMPGKGCVSYTTMIKGLV----------------------------------QNDCFG 180
FD+MP + V++ TMI G V +N G
Sbjct: 94 FDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIG 153
Query: 181 EALEVFKDMMSDSVVPNDLTLM------NVISACSRF----------------GEIWNCR 218
EAL +F+ M + V + V SA F G I N R
Sbjct: 154 EALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNER 213
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAY-CLCSGVGE------ARRLFDKMPE---------- 261
+ A + LV +L++AY L G G+ AR LFD++P+
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 262 -----RNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+N+V+ N M+ Y K G V AR LF+++ D+D ISW TMID Y
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVH 324
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
+T N++I+ Y + DA LF P D S N+M+SGY G ++ A F+ P
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTP 370
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
K VS+ ++I +N + EA+++F M + P+ TL +++SA + +
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP-ERNLVTCNVMLNGYSKTG 278
+H + +K + V V L+ Y C + E+RR+FD+M +R ++T N M+ GY+ G
Sbjct: 431 MHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 279 LVDMARELF 287
A LF
Sbjct: 490 NASEALNLF 498
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGF---HSNTFIQNSLINMYAKCGSISDARLL 123
+ ++S LK C ++ + +++H ++K G + N+L++ YAKCG++ A +
Sbjct: 433 VTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKI 492
Query: 124 FQACPVLDP-VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
F VS N ++SGYV +G D+A LF M +++ M++ ++ C EA
Sbjct: 493 FLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEA 552
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
+ VF+++ + + PN +T+MN++ C++ + R H I+ + + L T L+
Sbjct: 553 IGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDV 611
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
Y C + A +F R+LV M+ GY+ G A ++ + + ++
Sbjct: 612 YAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI 664
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+ +K+C+S+S + GR +H KLG + + + S++NMYAKC + D + +F+
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
LDPV NI+++G + C E + FK
Sbjct: 84 SLDPVVWNIVLTG--------------------------------LSVSCGRETMRFFKA 111
Query: 189 M-MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M +D P+ +T V+ C R G+ +N + +H+ IK ++ LV L+ Y
Sbjct: 112 MHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFG 171
Query: 248 GV-GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ +A FD + ++++V+ N ++ G+S+ ++ A F
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSF 212
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 34/255 (13%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+ +R F P + L C + G+ +HS +K G +T + N+
Sbjct: 103 RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNA 162
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
L++MYAK G I +A FD + K VS+
Sbjct: 163 LVSMYAKFGFI------------------------------FPDAYTAFDGIADKDVVSW 192
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC---RMIHAL 223
+I G +N+ +A F M+ + PN T+ NV+ C+ + C R IH+
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 224 AIKLA-VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDM 282
++ + + V V +L+ Y + EA LF +M ++LV+ NV++ GY+
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 283 ARELFERIPDKDVIS 297
A +LF + K +S
Sbjct: 313 AFQLFHNLVHKGDVS 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 131/329 (39%), Gaps = 81/329 (24%)
Query: 60 QNPAECELALVS-ALKSCSSISSP---SQGRQIHSLALKLGF-HSNTFIQNSLINMYAKC 114
+ P E A ++ L C+S+ GRQIHS ++ + ++ F+ NSL++ Y +
Sbjct: 217 KEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRV 276
Query: 115 GSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLF------------------- 155
G I +A LF D VS N++I+GY + A QLF
Sbjct: 277 GRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISI 336
Query: 156 --------DIMPGKGCVSYTTMIKGLVQNDCFGEALEVF-------------------KD 188
D+ GK SY L+++ G AL F KD
Sbjct: 337 LPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKD 396
Query: 189 MMS--------------------------DSVVPNDLTLMNVISACSRFGEIWNCRMIHA 222
++S +++ + +T+++++ C I + +H
Sbjct: 397 IISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHG 456
Query: 223 LAIKLAV---DGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-NLVTCNVMLNGYSKTG 278
++K + + + L+ AY C V A ++F + ER LV+ N +L+GY +G
Sbjct: 457 YSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG 516
Query: 279 LVDMARELFERIPDKDVISWGTMIDSYTQ 307
D A+ LF + D+ +W M+ Y +
Sbjct: 517 SHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
Query: 89 HSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQL 148
H ++K G N L+N+Y+K G + +AR +F + S N +I+ YVK +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 149 DNACQLFDIMP-GKGCVSYTTMIKGLVQND-CFGEALEVFKDMM---SDSVVPNDLTLMN 203
A +LF+ + ++Y T++ G + D C EA+E+F +M D + +D T+
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK--MPE 261
++ ++ ++ +H + +K DG ++L+H Y C E +F+ +
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPD-KDVISWGTMIDSYTQ 307
+ V N M+ Y + G +D A +F R P+ D ISW T+I Y Q
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ 237
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 3/243 (1%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ + + +K + +++ G Q+H + +K G F +SLI+MY+KCG + +F
Sbjct: 125 DFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFN 184
Query: 126 ACPV--LDPVSCNIMISGYVKAGQLDNACQLFDIMPG-KGCVSYTTMIKGLVQNDCFGEA 182
V +D V+ N MI+ Y + G +D A +F P +S+ T+I G QN EA
Sbjct: 185 GSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEA 244
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA 242
L++ M + + ++ + V++ S + + +HA +K VS+ ++
Sbjct: 245 LKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDV 304
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
YC C + A NL + + M+ GYS G + A+ LF+ + +K+++ W M
Sbjct: 305 YCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF 364
Query: 303 DSY 305
Y
Sbjct: 365 LGY 367
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 136/293 (46%), Gaps = 6/293 (2%)
Query: 3 VLISASFRFRIVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNP 62
+I+A R + ++LS+ NP L + I + + +++ + ++
Sbjct: 198 AMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLK 257
Query: 63 AECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARL 122
+ E + + L SS+ S G+++H+ LK G +SN F+ + ++++Y KCG++ A
Sbjct: 258 WD-EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAES 316
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKG---LVQNDCF 179
+ S + MI GY G++ A +LFD + K V +T M G L Q D
Sbjct: 317 AHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSV 376
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNL 239
E F + +++ P+ L +++V+ ACS + + IH +++ + + T
Sbjct: 377 LELARAF--IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAF 434
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+ Y C V A R+FD ER+ V N M+ G + G + + FE + +
Sbjct: 435 VDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 63/240 (26%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L +VS L +CS + G++IH +L+ G + + + ++MY+KCG++ A +F +
Sbjct: 394 LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS 453
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D V N MI+G G + Q F+
Sbjct: 454 SFERDTVMYNAMIAGCAHHGHEAKSFQHFE------------------------------ 483
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
DM P+++T M ++SAC G L ++G + ++ AY +
Sbjct: 484 -DMTEGGFKPDEITFMALLSACRHRG--------------LVLEGEKYFKS-MIEAYNIS 527
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP--DKDVISWGTMIDS 304
PE TC M++ Y K +D A EL E I +KD + G +++
Sbjct: 528 -------------PETGHYTC--MIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNA 572
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 32/266 (12%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+PN ++ W K +L ++ + C S L SC+S+ +
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS----SILTSCASLHA 365
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
G Q+H+ +K +++++ NSLI+MYAKC ++DAR +F D V N MI G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
Y + G +L EAL +F+DM + P+ LT
Sbjct: 426 YSRLG---TQWELH-------------------------EALNIFRDMRFRLIRPSLLTF 457
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
++++ A + + + IH L K ++ + + L+ Y C + ++R +FD+M
Sbjct: 458 VSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV 517
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELF 287
++LV N M GY + + A LF
Sbjct: 518 KDLVIWNSMFAGYVQQSENEEALNLF 543
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 13 IVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSA 72
+ R + ++P L+ W + ++ + +F + + + E L S
Sbjct: 96 VYARKVFEKMPERNLVSWSTMVSACNHHGIYEES---LVVFLEFWRTRKDSPNEYILSSF 152
Query: 73 LKSCSSISSPSQGR----QIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+++CS + +GR Q+ S +K GF + ++ LI+ Y
Sbjct: 153 IQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY----------------- 193
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
+K G +D A +FD +P K V++TTMI G V+ +L++F
Sbjct: 194 --------------LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
+M D+VVP+ L V+SACS + + IHA ++ ++ + L+ +Y C
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
V A +LF+ MP +N+++ +L+GY + L A ELF
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 31/210 (14%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L + L +CS + G+QIH+ L+ G
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLE------------------------------ 281
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
+D N++I YVK G++ A +LF+ MP K +S+TT++ G QN EA+E+F
Sbjct: 282 -MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M + P+ +++++C+ + +HA IK + V+ +L+ Y C
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
+ +AR++FD ++V N M+ GYS+ G
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + + + +++S G++ H LK G N +I N+L++MYAKCGS DA F
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD 614
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ D V N +IS Y G+ GK +AL++
Sbjct: 615 SAASRDVVCWNSVISSYANHGE------------GK-------------------KALQM 643
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ MMS+ + PN +T + V+SACS G + + L ++ ++ H C+
Sbjct: 644 LEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE------PETEHYVCM 697
Query: 246 CSGVG------EARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFE 288
S +G +AR L +KMP + + +L+G +K G V++A E
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L VS L++ +S++S +QIH L K G + + F ++LI++Y+ C + D+RL+F
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF-- 512
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D M K V + +M G VQ EAL +F
Sbjct: 513 -----------------------------DEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
++ P++ T N+++A + + H +K ++ ++ L+ Y C
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKC 603
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+A + FD R++V N +++ Y+ G A ++ E++ + +
Sbjct: 604 GSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI 652
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
LD NI+I+ Y +AG + A ++F+ MP + VS++TM+ + + E+L VF +
Sbjct: 77 LDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEF 136
Query: 190 M---SDSVVPNDLTLMNVISACSRFGEI--WNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
DS PN+ L + I ACS W + + +K D V V T L+ Y
Sbjct: 137 WRTRKDS--PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYL 194
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
+ AR +FD +PE++ VT M++G K G ++ +LF ++ + +V+ G ++ +
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 60 QNPAECELALVSALKSCSSISSPS---QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS 116
+N LVS + +CS++ P G+Q+H+ L+ G N+FI N+L+ MY K G
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGK 251
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
++ +++ L G+ V++ T++ L QN
Sbjct: 252 LASSKV-------------------------------LLGSFGGRDLVTWNTVLSSLCQN 280
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK-LAVDGLVLV 235
+ EALE ++M+ + V P++ T+ +V+ ACS + + +HA A+K ++D V
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 236 STNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
+ L+ YC C V RR+FD M +R + N M+ GYS+
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+ + +C + S+ IH +K G + F+QN+L++MY++ G I A +F
Sbjct: 408 MAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME 467
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
D V+ N MI+GYV + ++A L M QN +V K
Sbjct: 468 DRDLVTWNTMITGYVFSEHHEDALLLLHKM----------------QN----LERKVSKG 507
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNLMHAYCLC 246
S+ PN +TLM ++ +C+ + + IHA AIK LA D V V + L+ Y C
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD--VAVGSALVDMYAKC 565
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
+ +R++FD++P++N++T NV++ Y G
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 33/211 (15%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLG-FHSNTFIQNSLINMYAKCGSISDARLLF 124
E + S L +CS + G+++H+ ALK G N+F+ ++L++MY C + R +F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
G D L++ MI G QN+ EAL
Sbjct: 362 D--------------------GMFDRKIGLWN-----------AMIAGYSQNEHDKEALL 390
Query: 185 VFKDMM-SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+F M S ++ N T+ V+ AC R G IH +K +D V LM Y
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGY 274
+ A R+F KM +R+LVT N M+ GY
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 31/148 (20%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ L++ L SC+++S+ ++G++IH+ A+K ++ + ++L++MYAKCG + +R +F
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
P + ++ N++I Y M G G EA+++
Sbjct: 578 IPQKNVITWNVIIMAYG--------------MHGNG-----------------QEAIDLL 606
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEI 214
+ MM V PN++T ++V +ACS G +
Sbjct: 607 RMMMVQGVKPNEVTFISVFAACSHSGMV 634
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 61/241 (25%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF-IQNSLINMYAKCGSISDARLLFQA 126
A + LK+ + + G+QIH+ K G+ ++ + N+L+N+Y KCG F A
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD-------FGA 151
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
++FD + + VS+ ++I L + + ALE F
Sbjct: 152 V------------------------YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ M+ ++V P+ TL++V++ACS N M L + V HAY L
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACS------NLPMPEGLMMGKQV-----------HAYGLR 230
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
G E N N ++ Y K G + ++ L +D+++W T++ S
Sbjct: 231 KG------------ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 307 Q 307
Q
Sbjct: 279 Q 279
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R L E+ P ++ W I + + PQ+ + +F + + E S K+
Sbjct: 84 RKLFDEMCEPNVVSWTSV---ISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKA 140
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
CS+++ G+ IH+ G N + +SL++MY KC + AR +F +
Sbjct: 141 CSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDS--------- 191
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS--DS 193
MI GY G+ VS+T+MI QN EA+E+F+ + S
Sbjct: 192 --MI-GY-----------------GRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS 231
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
N L +VISACS G + ++ H L + + +V+T+L+ Y C + A
Sbjct: 232 DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAE 291
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
++F ++ ++++ M+ +K GL + A +LF+ +
Sbjct: 292 KIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 98/206 (47%), Gaps = 40/206 (19%)
Query: 88 IHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQ 147
+H+L LKLGF S+TF N L+ IS YVK +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLV------------------------------IS-YVKLKE 79
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS-VVPNDLTLMNVIS 206
++ A +LFD M VS+T++I G AL +F+ M D V PN+ T +V
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 207 ACSRFGEIWNCRMIHALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARRLFDKM--PE 261
ACS E + IHA +L + GL ++VS++L+ Y C+ V ARR+FD M
Sbjct: 140 ACSALAESRIGKNIHA---RLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYG 196
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELF 287
RN+V+ M+ Y++ A ELF
Sbjct: 197 RNVVSWTSMITAYAQNARGHEAIELF 222
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 64/242 (26%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ L S + +CSS+ G+ H L + G+ SNT + SL++MYAKCGS+S A +F
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 295
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ C+ +IS YT+MI ++ A+++
Sbjct: 296 ------RIRCHSVIS-------------------------YTSMIMAKAKHGLGEAAVKL 324
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F +M++ + PN +TL+ V+ ACS G LV+ L + +
Sbjct: 325 FDEMVAGRINPNYVTLLGVLHACSHSG---------------------LVNEGLEYLSLM 363
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP---DKDVISWGTMI 302
G +P+ TC V + G + G VD A EL + I ++ + WG ++
Sbjct: 364 AEKYG-------VVPDSRHYTCVVDMLG--RFGRVDEAYELAKTIEVGAEQGALLWGALL 414
Query: 303 DS 304
+
Sbjct: 415 SA 416
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 35/225 (15%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
ALK+C+ +G +IH L ++G S+ +I +L+ MY K + AR
Sbjct: 106 ALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR---------- 155
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
Q+FD M K V++ TM+ GL QN C AL +F DM S
Sbjct: 156 ---------------------QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRS 194
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLV-STNLMHAYCLCSGVG 250
V + ++L N+I A S+ + CR +H L IK G + S+ L+ YC C+ +
Sbjct: 195 CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK---KGFIFAFSSGLIDMYCNCADLY 251
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
A +F+++ ++ + M+ Y+ G + ELF+ + + DV
Sbjct: 252 AAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDV 296
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 31/208 (14%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+G IH A++ G + + SL++MY+KCG + A LF D VS + MI+ Y
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+AGQ D EA+ +F+DMM + PN +TL +
Sbjct: 378 QAGQHD-------------------------------EAISLFRDMMRIHIKPNAVTLTS 406
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
V+ C+ + IH AIK ++ + +T ++ Y C A + F+++P ++
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIP 291
V N + GY++ G + A ++++ +
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMK 494
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 37/256 (14%)
Query: 40 PSLLQDPQH--CIRIFCNA-RQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
S Q QH I +F + R H P + L S L+ C+ +++ G+ IH A+K
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNA--VTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
S ++I+MYAKCG S A F+ P+ D V+ N + GY + G +
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDAN------- 484
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
+A +V+K+M V P+ T++ ++ C+ +
Sbjct: 485 ------------------------KAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYAR 520
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP-ERNLVTCNVMLNGYS 275
++ IK D V+ L++ + C + A LFDK E++ V+ N+M+NGY
Sbjct: 521 GSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYL 580
Query: 276 KTGLVDMARELFERIP 291
G + A F ++
Sbjct: 581 LHGQAEEAVATFRQMK 596
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 42/278 (15%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+V L++C+ S ++G ++ +K GF S + ++LINM+ KC +++ A +LF C
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 129 V-LDPVSCNIMISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEAL 183
VS NIM++GY+ GQ + A F M + V++ +++ + +
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 184 EVFKDMM-----SDSVVPNDLTLM----NVISACSR-FGEI-------WNCRM----IHA 222
V ++ S + V N L M +I + + F EI WN + H
Sbjct: 625 SVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHG 684
Query: 223 LA-------IKLAVDGLVLVSTNLMHAYCLCSGVG---EARRLFDKMPERNLVTCNV--- 269
LA + + + L S + + C G E +R+F++M ER+ + V
Sbjct: 685 LASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHY 744
Query: 270 --MLNGYSKTGLVDMARELFERIPDKDVIS-WGTMIDS 304
M++ K GL A E+ R+ K + WG +++S
Sbjct: 745 ACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNS 782
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
N +I+ Y + D + +FD + G V + +MI+G + EAL F M + +
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 196 -PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P+ + + AC+ + IH L ++ ++ V + T L+ YC + AR+
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 255 LFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+FDKM +++VT N M++G ++ G A LF
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 130/258 (50%), Gaps = 13/258 (5%)
Query: 50 IRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLIN 109
+++F R+ + + ++++V C+ + +Q H +A+K+G ++ + N+L++
Sbjct: 96 MKLFVEMRRKRVEID-DVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMD 154
Query: 110 MYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTM 169
MY KCG +S+ + +F+ VS +++ VK L+ ++F MP + V++T M
Sbjct: 155 MYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVM 214
Query: 170 IKGLVQNDCFGEALEVFKDMMSD-SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL- 227
+ G + E LE+ +M+ N +TL +++SAC++ G + R +H A+K
Sbjct: 215 VAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKE 274
Query: 228 ------AVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG--- 278
A V+V T L+ Y C + + +F M +RN+VT N + +G + G
Sbjct: 275 MMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGR 334
Query: 279 -LVDMARELFERIPDKDV 295
++DM ++ + D+
Sbjct: 335 MVIDMFPQMIREVKPDDL 352
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMP--GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
N + Y +G++ A +LFD +P K V +TT++ + ++++F +M
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
V +D++++ + C++ ++ + H +A+K+ V V V LM Y C V E +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
R+F+++ E+++V+ V+L+ K ++ RE+F +P+++ ++W M+ Y
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGY 218
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 62/246 (25%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGF-------HSNTFIQNSLINMYAKCGSISD 119
+ L S L +C+ + GR +H ALK + + + +L++MYAKCG+I
Sbjct: 245 VTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI-- 302
Query: 120 ARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF 179
D++ +F +M + V++ + GL +
Sbjct: 303 -----------------------------DSSMNVFRLMRKRNVVTWNALFSGLAMHGKG 333
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFG---EIWNCRMIHALAIKLAVDGLVLVS 236
+++F M+ + V P+DLT V+SACS G E W C H+L GL
Sbjct: 334 RMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRC--FHSLRFY----GL---E 383
Query: 237 TNLMHAYCLCSGVG------EARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMA----RE 285
+ H C+ +G EA L +MP N V +L S G V++A RE
Sbjct: 384 PKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRE 443
Query: 286 LFERIP 291
L + P
Sbjct: 444 LIQMSP 449
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 38/224 (16%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G+ +HS ++K G S+ + +SLI+MY KCG + AR +F P + + N MI GY+
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 145 AGQLDNACQLF-DIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
G A LF +I + V++ MIKG + +A E+F+ M P +L
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------PFEL---- 174
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
+ + A ++ L V Y + +AR+ F+ +PE+N
Sbjct: 175 --------------KNVKAWSVMLGV-------------YVNNRKMEDARKFFEDIPEKN 207
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
++M++GY + G V AR +F R+ +D++ W T+I Y Q
Sbjct: 208 AFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 251
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 94/189 (49%)
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
++ +Y + DAR F+ P + ++M+SGY + G + A +F + + V +
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
T+I G QN +A++ F +M + P+ +T+ +++SAC++ G + R +H+L
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
++ VS L+ Y C + A +F+ + R++ CN M++ + G A E+
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 287 FERIPDKDV 295
F + D+
Sbjct: 363 FSTMESLDL 371
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L +C+ GR++HSL G N F+ N+LI+MYAKCG + +A +F++ V
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Query: 131 DPVSCNIMISGYVKAGQLDNACQLF------DIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
CN MIS G+ A ++F D+ P + +++ ++ V E L+
Sbjct: 339 SVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDE--ITFIAVLTACVHGGFLMEGLK 396
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIK 226
+F +M + V PN +I R G++ R++ + +K
Sbjct: 397 IFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 3/230 (1%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L L+SC + S+ Q H+ KLG+ + + S + Y +C AR L
Sbjct: 33 LKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFL 92
Query: 129 VLDPVSCNI--MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
L P CNI +I +K G+ A ++ + +++ MI G V+N + EAL+
Sbjct: 93 SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152
Query: 187 KDMMS-DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
K+M+S + PN + + ++AC+R G++ + + +H+L I ++ ++S+ L+ Y
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C +G +R +F + ++ N M+ G++ GL A +F + + V
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV 262
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 92/245 (37%), Gaps = 72/245 (29%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ + S+L +C+ + + +HSL + G N + ++L+++YAKCG I +R +F
Sbjct: 165 KFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFY 224
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ D N MI+G+ G EA+ V
Sbjct: 225 SVKRNDVSIWNAMITGFATHG-------------------------------LATEAIRV 253
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F +M ++ V P+ +T + +++ CS
Sbjct: 254 FSEMEAEHVSPDSITFLGLLTTCSH----------------------------------- 278
Query: 246 CSGVGEARRLFDKMPER-----NLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISWG 299
C + E + F M R L M++ + G V A EL E +P + DV+ W
Sbjct: 279 CGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWR 338
Query: 300 TMIDS 304
+++ S
Sbjct: 339 SLLSS 343
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%)
Query: 108 INMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYT 167
++MY+K G A ++ + +S NI+I+GYV+AG L NA ++FD MP + ++
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 168 TMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL 227
MI GL+Q + E L +F++M P++ TL +V S + + + IH IK
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 228 AVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
++ ++V+++L H Y + + + MP RNLV N ++ G ++ G
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 171
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E L S + + S S G+QIH +K G + + +SL +MY + G + D ++ +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ PV + V++ T+I G QN C L +
Sbjct: 151 SMPV-------------------------------RNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+K M PN +T + V+S+CS + IHA AIK+ +V V ++L+ Y
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
C +G+A + F + + + V + M++ Y G D A ELF + ++
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 31/204 (15%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G Q+H L + G I+NSL++MY+KCG DA LF+ D V+ N MISGYV+
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
+G ++ E+L F +M+S V+P+ +T ++
Sbjct: 318 SGLME-------------------------------ESLTFFYEMISSGVLPDAITFSSL 346
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+ + S+F + C+ IH ++ ++ + +++ L+ AY C GV A+ +F + ++
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 265 VTCNVMLNGYSKTGLVDMARELFE 288
V M++GY GL + E+F
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFR 430
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 95 LGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQL 154
LG N F+ +SLI Y + G I LF D V N+M++GY K G LD
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD----- 221
Query: 155 FDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI 214
++IKG F M D + PN +T V+S C+ I
Sbjct: 222 -------------SVIKG-------------FSVMRMDQISPNAVTFDCVLSVCASKLLI 255
Query: 215 WNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGY 274
+H L + VD + +L+ Y C +A +LF M + VT N M++GY
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 275 SKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
++GL++ + F ++IS G + D+ T
Sbjct: 316 VQSGLMEESLTFF-----YEMISSGVLPDAIT 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ LVS L + + GR++H +K GF + I ++I+MYAKCG
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG---------- 490
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+++ A ++F+ + + VS+ +MI Q+D A+++
Sbjct: 491 ---------------------RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+ M + + +++ +SAC+ + IH IK ++ V + L+ Y
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
C + A +F M E+N+V+ N ++ G + + LF + +K I
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L++CS+ + QG+Q+H+ + +++ ++ MYA CGS SD +F
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY------- 94
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+LD + I P + ++I V+N +AL + M+
Sbjct: 95 --------------RLD--LRRSSIRP------WNSIISSFVRNGLLNQALAFYFKMLCF 132
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V P+ T ++ AC + L +D V+++L+ AY +
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVD 281
+LFD++ +++ V NVMLNGY+K G +D
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ S L S S + +QIH ++ + F+ ++LI+ Y KC +S A+ +F
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
C +D V +T MI G + N + ++LE+F
Sbjct: 401 CNSVD-------------------------------VVVFTAMISGYLHNGLYIDSLEMF 429
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ ++ + PN++TL++++ + R +H IK D + ++ Y C
Sbjct: 430 RWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ A +F+++ +R++V+ N M+ +++ A ++F ++
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
+I Y++ G++D +LFD + K CV + M+ G + ++ F M D + PN
Sbjct: 179 LIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPN 238
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD 257
+T V+S C+ L I L V +H + SGV F+
Sbjct: 239 AVTFDCVLSVCAS-----------KLLIDLGVQ---------LHGLVVVSGVD-----FE 273
Query: 258 KMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
+ N +L+ YSK G D A +LF + D ++W MI Y Q
Sbjct: 274 GSIK------NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 37/174 (21%)
Query: 44 QDPQHCIRIFCNARQHQNPAECE--LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNT 101
+P I IF RQ C +++ +AL +C+++ S S G+ IH +K S+
Sbjct: 521 DNPSAAIDIF---RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 102 FIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK 161
+ +++LI+MYAKCG+ L A +F M K
Sbjct: 578 YSESTLIDMYAKCGN-------------------------------LKAAMNVFKTMKEK 606
Query: 162 GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS-VVPNDLTLMNVISACSRFGEI 214
VS+ ++I + ++L +F +M+ S + P+ +T + +IS+C G++
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E L S +K+ ++ G Q+H +K GF SN + ++L+++Y + G + DA+L+
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV-- 218
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
FD + + VS+ +I G + +ALE+
Sbjct: 219 -----------------------------FDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+ M+ D P+ + ++ ACS G + + +HA IK + L+ Y
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ +AR++FD++ +R++V+ N +L Y++ G A FE +
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK C+ QGR +H+ L+ F + + N+L+NMYAKC
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC------------------ 108
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
G L+ A ++F+ MP + V++TT+I G Q+D +AL F M+
Sbjct: 109 -------------GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF 155
Query: 193 SVVPNDLTLMNVISACSRFGEIWNC--RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
PN+ TL +VI A + E C +H +K D V V + L+ Y +
Sbjct: 156 GYSPNEFTLSSVIKAAA--AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+A+ +FD + RN V+ N ++ G+++ + A ELF+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ S +CSS QG+ +H+ +K G F N+L++MYAK GSI DAR +F
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEA 182
D VS N +++ Y + G A F+ M G +S+ +++ + E
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEI 214
++ M D +VP + V+ R G++
Sbjct: 383 WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 11/75 (14%)
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+L+ ++HA+ L S + ++V N +LN Y+K G ++ AR++FE++P
Sbjct: 75 LLIQGRIVHAHILQS-----------IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 293 KDVISWGTMIDSYTQ 307
+D ++W T+I Y+Q
Sbjct: 124 RDFVTWTTLISGYSQ 138
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 38/233 (16%)
Query: 70 VSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
+S + +CSS S +QGR+IH L +T + N +++MY KC
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKC--------------- 115
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
G L +A ++FD MP + VSYT++I G QN EA+ ++ M
Sbjct: 116 ----------------GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM 159
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ + +VP+ ++I AC+ ++ + +HA IKL ++ L+ Y + +
Sbjct: 160 LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQM 219
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD-KDVISWGTM 301
+A R+F +P ++L++ + ++ G+S+ G FE + K+++S+G
Sbjct: 220 SDASRVFYGIPMKDLISWSSIIAGFSQLGFE------FEALSHLKEMLSFGVF 266
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 60/260 (23%)
Query: 58 QHQNP------------AECE---LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF 102
QH+ P +ECE + + + L+ C ISS G Q+H +LK G F
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
I+N LI+MYAKCGS+ AR +F + D VS + +I GY ++G
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG---------------- 553
Query: 163 CVSYTTMIKGLVQNDCFG-EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIH 221
FG EAL +FK+M S + PN +T + V++ACS G +
Sbjct: 554 ----------------FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEE----- 592
Query: 222 ALAIKLAVDGLVLVSTNLMHAYCL------CSGVGEARRLFDKMP-ERNLVTCNVMLNGY 274
L + + +S H C+ + EA R D+M E ++V +L+
Sbjct: 593 GLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Query: 275 SKTGLVDMARELFERIPDKD 294
G V +A++ E I D
Sbjct: 653 KTQGNVHLAQKAAENILKID 672
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ A S +K+C+S S G+Q+H+ +KL S+ QN+LI MY
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY-------------- 213
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
V+ Q+ +A ++F +P K +S++++I G Q EAL
Sbjct: 214 -----------------VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSH 256
Query: 186 FKDMMSDSVV-PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
K+M+S V PN+ + + ACS IH L IK + G + +L Y
Sbjct: 257 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYA 316
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFER------IPD 292
C + ARR+FD++ + + NV++ G + G D A +F + IPD
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGY 142
SQG QIHS +K GF ++ + NSL+ MY C + LF+
Sbjct: 388 SQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE----------------- 430
Query: 143 VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
D VS+ T++ +Q++ E L +FK M+ P+ +T+
Sbjct: 431 -------------DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMG 477
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER 262
N++ C + +H ++K + + L+ Y C +G+ARR+FD M R
Sbjct: 478 NLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 263 NLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
++V+ + ++ GY+++G + A LF+ + +
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI 570
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 115/313 (36%), Gaps = 102/313 (32%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E S+LK+CSS+ P G QIH L +K N SL +MYA+CG ++ AR +F
Sbjct: 270 EYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D S N++I+G G D EA+ V
Sbjct: 330 QIERPDTASWNVIIAGLANNGYAD-------------------------------EAVSV 358
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F M S +P+ ++L +++ A ++ + IH+ IK + V +L+ Y
Sbjct: 359 FSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTF 418
Query: 246 CSGVG--------------------------------EARRLFDKMP----ERNLVTCNV 269
CS + E RLF M E + +T
Sbjct: 419 CSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGN 478
Query: 270 MLNG--------------------------YSKTGLVDM---------ARELFERIPDKD 294
+L G + K GL+DM AR +F+ + ++D
Sbjct: 479 LLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRD 538
Query: 295 VISWGTMIDSYTQ 307
V+SW T+I Y Q
Sbjct: 539 VVSWSTLIVGYAQ 551
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 170 IKGLVQNDCFGEALEVFKDMMSDSVVPNDL-TLMNVISACSRFGEIWNCRMIHALAIKLA 228
I L +++ + EALE F +S L T +++I ACS + R IH +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 229 VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+++ +++ Y C + +AR +FD MPERNLV+ ++ GYS+ G A L+
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 289 RIPDKDVI----SWGTMIDS 304
++ +D++ ++G++I +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKA 177
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 36/215 (16%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
QG+QIH++ K+ + + + +L+NMYAK +SDAR F++ V + VS N MI G+
Sbjct: 259 QGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFA 318
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+ G+ G+ EA+ +F M+ +++ P++LT +
Sbjct: 319 QNGE------------GR-------------------EAMRLFGQMLLENLQPDELTFAS 347
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
V+S+C++F IW + + A+ K + V+ +L+ +Y + EA F + E +
Sbjct: 348 VLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD 407
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERI-----PDK 293
LV+ ++ + G + + ++FE + PDK
Sbjct: 408 LVSWTSVIGALASHGFAEESLQMFESMLQKLQPDK 442
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
++ + ++ C+ ++ G Q+H L +K G S+ F SL++ Y KCG I +AR +F+A
Sbjct: 143 VSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEA 202
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D V N ++S YV G +D A L +M K + D F
Sbjct: 203 VLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSD---------KNRFRGDYF------- 246
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
T +++SAC I + IHA+ K++ + V+T L++ Y
Sbjct: 247 -------------TFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKS 289
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ + +AR F+ M RN+V+ N M+ G+++ G A LF
Sbjct: 290 NHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLF 330
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
K +S+ S +Q H +K G +++ F+QN L+ Y K DA LF P+ + V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 134 SCNIMISGYV-KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+ NI+I G + + G ++ L Y + I +F D+ D
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHL--------GFCYLSRI--------------LFTDVSLD 141
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V + M +I C+ + +H L +K ++ ST+L+H Y C + EA
Sbjct: 142 HV-----SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEA 196
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
RR+F+ + +R+LV N +++ Y G++D A
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 32/153 (20%)
Query: 60 QNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISD 119
+N EL S L SC+ S+ + +Q+ ++ K G + NSLI+ Y++ G++S+
Sbjct: 336 ENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSE 395
Query: 120 ARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF 179
A L F + D VS +T++I L +
Sbjct: 396 ALLCFHSIREPDLVS-------------------------------WTSVIGALASHGFA 424
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
E+L++F+ M+ + P+ +T + V+SACS G
Sbjct: 425 EESLQMFESML-QKLQPDKITFLEVLSACSHGG 456
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
Q R+F N + +C + S LK +++ GRQ+H +K GF + + S
Sbjct: 75 QEAKRLFLNIHRLGMEMDCSI-FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTS 133
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
L++ Y K + D R ++FD M + V++
Sbjct: 134 LVDTYMKGSNFKDGR-------------------------------KVFDEMKERNVVTW 162
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
TT+I G +N E L +F M ++ PN T + + G +H + +K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
+D + VS +L++ Y C V +AR LFDK +++VT N M++GY+ GL
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + S +K C+++ Q+H +K GF + I+ +L+ Y+KC ++ DA LF+
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ V VS+T MI G +QND EA+++
Sbjct: 355 EIGCVGNV------------------------------VSWTAMISGFLQNDGKEEAVDL 384
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F +M V PN+ T +++A + + +HA +K + V T L+ AY
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
V EA ++F + ++++V + ML GY++TG + A ++F
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
G V + +L NA LFD PG+ SY +++ G ++ EA +F ++ + +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
+V+ + + R +H IK V V T+L+ Y S + R++FD+M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
ERN+VT +++GY++ + D LF R+ ++ GT +S+T
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE-----GTQPNSFT 196
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 32/239 (13%)
Query: 58 QHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSI 117
Q++ +AL + +G Q+H++ +K G + NSLIN+
Sbjct: 186 QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINL------- 238
Query: 118 SDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQND 177
Y+K G + A LFD K V++ +MI G N
Sbjct: 239 ------------------------YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 178 CFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST 237
EAL +F M + V ++ + +VI C+ E+ +H +K + T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 238 NLMHAYCLCSGVGEARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
LM AY C+ + +A RLF ++ N+V+ M++G+ + + A +LF + K V
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 32/148 (21%)
Query: 66 ELALVSALKSCSSI-SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF 124
E S L C++ +S QG+Q H A+K S+ + ++L+ MYAK G+I A +F
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ D VS N MISGY + GQ +AL+
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQA-------------------------------MKALD 582
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFG 212
VFK+M V + +T + V +AC+ G
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAG 610
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 33/209 (15%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+G++IH+ + G+ S+ +I +L++MYA+ G + A +F PV + VS + MI+ Y
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS--VVPNDLTL 201
K G+ F EAL F++MM ++ PN +T+
Sbjct: 260 KNGK------------------------------AF-EALRTFREMMRETKDSSPNSVTM 288
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
++V+ AC+ + ++IH ++ +D ++ V + L+ Y C + +R+FD+M +
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERI 290
R++V+ N +++ Y G A ++FE +
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 57 RQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS 116
R+ ++ + + +VS L++C+S+++ QG+ IH L+ G S + ++L+ MY +CG
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKG 172
+ + +F D VS N +IS Y G A Q+F+ M G V++ +++
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 173 LVQNDCFGEALEVFKDMMSD 192
E +F+ M D
Sbjct: 396 CSHEGLVEEGKRLFETMWRD 415
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 35/222 (15%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
GRQIH+ ++ G SNT I+ ++NMY KCG + A+ +F V PV+C ++ GY +
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
AG+ + AL++F D++++ V + V
Sbjct: 263 AGRARD-------------------------------ALKLFVDLVTEGVEWDSFVFSVV 291
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+ AC+ E+ + IHA KL ++ V V T L+ Y CS A R F ++ E N
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
V+ + +++GY + + A + F+ + K+ ++++S+T
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKN----ASILNSFT 389
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 46/238 (19%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
++C + S S GR +H +++G + + +QN ++ MY +C S+ DA LF L+
Sbjct: 90 FEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFK 187
VS MIS Y + G LD A LF M G YTT++K LV
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN------------ 196
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
P L FG R IHA I+ + + T +++ Y C
Sbjct: 197 --------PRALD----------FG-----RQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
+ A+R+FD+M + V C ++ GY++ G A +LF D+++ G DS+
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF-----VDLVTEGVEWDSF 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C+S+ + G+QIH+ KLG S + L++ Y KC S
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS---------------- 335
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS- 191
++AC+ F + VS++ +I G Q F EA++ FK + S
Sbjct: 336 ---------------FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK 380
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
++ + N T ++ ACS + +HA AIK ++ G + L+ Y C + +
Sbjct: 381 NASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDD 440
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
A +F+ M ++V ++G++ G A LFE++
Sbjct: 441 ANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 113/279 (40%), Gaps = 65/279 (23%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
E+ P + W I + + ++ F + R S ++CS ++
Sbjct: 345 EIREPNDVSW---SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS 140
+ G Q+H+ A+K + + +++LI MY+KCG + DA +F++ D V+ IS
Sbjct: 402 DCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFIS 461
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
G+ G NA EAL +F+ M+S + PN +T
Sbjct: 462 GHAYYG---NA----------------------------SEALRLFEKMVSCGMKPNSVT 490
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
+ V++ACS G L G + T L R ++ P
Sbjct: 491 FIAVLTACSHAG--------------LVEQGKHCLDTML--------------RKYNVAP 522
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISW 298
+ C M++ Y+++GL+D A + + +P + D +SW
Sbjct: 523 TIDHYDC--MIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDG-LVLVSTNL 239
EA E ++M V + + + AC + + R++H +++ ++ VL+ +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCV 124
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ YC C + +A +LFD+M E N V+ M++ Y++ G++D A LF
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 125/286 (43%), Gaps = 42/286 (14%)
Query: 21 ELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSIS 80
E+P+ T W I A +P + ++ N R P + + LK+C+ +
Sbjct: 141 EMPDRTAFAW---NTMIGAYVSNGEPASALALYWNMRVEGVPLGLS-SFPALLKACAKLR 196
Query: 81 SPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL-DPVSCNIMI 139
G ++HSL +KLG+HS FI N+L++MYAK +S AR LF D V N ++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 140 SGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDL 199
S SY+T K L E LE+F++M PN
Sbjct: 257 S------------------------SYSTSGKSL-------ETLELFREMHMTGPAPNSY 285
Query: 200 TLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTN-LMHAYCLCSGVGEARRLFDK 258
T+++ ++AC F + IHA +K + L N L+ Y C + +A R+ +
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 259 MPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
M ++VT N ++ GY + + A E F D+I+ G D
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFF-----SDMIAAGHKSDE 386
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 30/232 (12%)
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
PA +VSAL +C S G++IH+ LK HS+ +Y
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS--------ELYV--------- 322
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
CN +I+ Y + G++ A ++ M V++ ++IKG VQN + E
Sbjct: 323 -------------CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
ALE F DM++ +++++ ++I+A R + +HA IK D + V L+
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 429
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
Y C+ R F +M +++L++ ++ GY++ A ELF + K
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 32/225 (14%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+++ S + + +S+ G ++H+ +K G+ SN + N+LI+MY+KC
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN---------- 435
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
++C + + F M K +S+TT+I G QNDC EALE+
Sbjct: 436 -------LTCYM--------------GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+D+ + +++ L +++ A S + + IH ++ + V + L+ Y
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGK 533
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C +G A R+F+ + +++V+ M++ + G A ELF R+
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 58 QHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKL--GFHSNTFIQNSLINMYAKCG 115
++ +P E A L+ C + SQGRQ+HS K F + F+ L+ MY KCG
Sbjct: 75 ENNSPVE---AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCG 130
Query: 116 SISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQ 175
S LD+A ++FD MP + ++ TMI V
Sbjct: 131 S-------------------------------LDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 176 NDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLV 235
N AL ++ +M + V + ++ AC++ +I + +H+L +KL +
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 236 STNLMHAYCLCSGVGEARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFERI 290
L+ Y + ARRLFD E+ + V N +L+ YS +G ELF +
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ L S L++ S + S ++IH L+ G +T IQN L+++Y KC ++
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNM-------- 537
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
GY A ++F+ + GK VS+T+MI N EA+E+
Sbjct: 538 ---------------GY--------ATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNLMHAY 243
F+ M+ + + + L+ ++SA + + R IH ++ ++G + V+ ++ Y
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA--VVDMY 632
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C + A+ +FD++ + L+ M+N Y G A ELF+++ ++V
Sbjct: 633 ACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 31/130 (23%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGY 142
++GR+IH L+ GF I ++++MYA CG + A+
Sbjct: 604 NKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAK--------------------- 642
Query: 143 VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
+FD + KG + YT+MI + C A+E+F M ++V P+ ++ +
Sbjct: 643 ----------AVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFL 692
Query: 203 NVISACSRFG 212
++ ACS G
Sbjct: 693 ALLYACSHAG 702
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 31/215 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C+ SS G +HSL +K GF+ + SL+++Y+
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG------------------- 158
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+G+L++A +LFD +P + V++T + G + EA+++FK M+
Sbjct: 159 ------------SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V P+ ++ V+SAC G++ + I ++ + V T L++ Y C + +A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
R +FD M E+++VT + M+ GY+ ELF
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 122/293 (41%), Gaps = 48/293 (16%)
Query: 1 MLVLISASFRFRIVHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQ 60
+L + S S R H+ L E+P+ +++ W + I +F +
Sbjct: 152 LLSIYSGSGRLNDAHK-LFDEIPDRSVVTWTALFSGYTTSG---RHREAIDLFKKMVEMG 207
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA 120
+ +V L +C + G I ++ N+F++ +L+N+YAKCG
Sbjct: 208 VKPDSYF-IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG----- 261
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
+++ A +FD M K V+++TMI+G N
Sbjct: 262 --------------------------KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI----WNCRMI--HALAIKLAVDGLVL 234
E +E+F M+ +++ P+ +++ +S+C+ G + W +I H L
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNL------F 349
Query: 235 VSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
++ L+ Y C + +F +M E+++V N ++G +K G V ++ +F
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
Y ++I G V N F E L++F + + + T V+ AC+R +H+L +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
K + V T+L+ Y + +A +LFD++P+R++VT + +GY+ +G A +
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 286 LFERIPDKDVISWGTMIDSY 305
LF K ++ G DSY
Sbjct: 199 LF-----KKMVEMGVKPDSY 213
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 32/234 (13%)
Query: 63 AECELALVSA-LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
++CE + L++ + + S G+Q+H ALKLG NTF+ LI+MY+KCG I
Sbjct: 220 SDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIE--- 276
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
D C F+ MP K V++ +I G + E
Sbjct: 277 ---------------------------DARCA-FECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
AL + DM V + TL +I ++ ++ + HA I+ + ++ +T L+
Sbjct: 309 ALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVD 368
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
Y V AR +FDK+P +N+++ N ++ GY+ G A +LFE++ +V
Sbjct: 369 FYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 36/234 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+++C + S ++++ + GF ++ N ++ M+ KCG I DAR
Sbjct: 130 VEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDAR----------- 178
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+LFD +P + SY ++I G V + EA E+FK M +
Sbjct: 179 --------------------RLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
T ++ A + G I+ + +H A+KL V VS L+ Y C + +A
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
R F+ MPE+ V N ++ GY+ G + A L + D G ID +T
Sbjct: 279 RCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDS-----GVSIDQFT 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
V+ ++ Y K G++D A +FD +P K +S+ ++ G + +A+++F+ M++
Sbjct: 361 VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 193 SVVPNDLTLMNVISACSRFG 212
+V PN +T + V+SAC+ G
Sbjct: 421 NVAPNHVTFLAVLSACAYSG 440
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 106 SLINMYAKCGSISDARLL----------FQACPVLDPVSCNIMISGYVKAGQLDNACQLF 155
++++++A C +D+RL+ +AC + CN ++ Y K G LD+A +F
Sbjct: 298 TIVSVFAGC---ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 156 DIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIW 215
M + VSYT+MI G + GEA+++F++M + + P+ T+ V++ C+R+ +
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 216 NCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
+ +H + + + VS LM Y C + EA +F +M +++++ N ++ GYS
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 276 KTGLVDMARELF 287
K + A LF
Sbjct: 475 KNCYANEALSLF 486
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
KS SS+ S G Q+H LK GF + NSL+ Y
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY---------------------- 240
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
+K ++D+A ++FD M + +S+ ++I G V N + L VF M+
Sbjct: 241 ---------LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
+ + T+++V + C+ I R +H++ +K L+ Y C + A+
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+F +M +R++V+ M+ GY++ GL A +LFE + ++ +
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 13/241 (5%)
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA 120
+P E +A V L +C+S+S+ +GR+IH ++ G+ S+ + NSL++MYAKCG++ A
Sbjct: 496 SPDERTVACV--LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQN 176
+LF D VS +MI+GY G A LF+ M G +S+ +++ +
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 177 DCFGEALEVFKDMMSD-SVVPNDLTLMNVISACSRFGEIWNC-RMIHALAI--KLAVDGL 232
E F M + + P ++ +R G++ R I + I + G
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 673
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
+L + H L V E ++F+ PE N +M N Y++ + + L +RI
Sbjct: 674 LLCGCRIHHDVKLAEKVAE--KVFELEPE-NTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 293 K 293
+
Sbjct: 731 R 731
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L S L+ C+ S G+++ + GF ++ + + L MY CG + +A +F
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
+ + NI+++ K+G F ++ +FK
Sbjct: 157 IEKALFWNILMNELAKSGD-------------------------------FSGSIGLFKK 185
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
MMS V + T V + S + +H +K V +L+ Y
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
V AR++FD+M ER++++ N ++NGY GL + +F
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 117/246 (47%), Gaps = 42/246 (17%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + LK+C +++ +G QIH LK+GF + NSL++MY+KCG I++
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE------ 160
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
A ++F + + +S+ MI G V +AL+
Sbjct: 161 -------------------------AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195
Query: 186 FKDMMSDSVV---PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD--GLVLVSTNLM 240
F MM ++ + P++ TL +++ ACS G I+ + IH ++ ++ +L+
Sbjct: 196 F-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLV 254
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGT 300
Y C + AR+ FD++ E+ +++ + ++ GY++ G A LF+R+ + + +
Sbjct: 255 DLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN-----S 309
Query: 301 MIDSYT 306
IDS+
Sbjct: 310 QIDSFA 315
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
LVS L+ C+ QG Q+H LK G N N LI+MY KC P
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCRE-----------P 57
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
++ A ++FD MP + VS++ ++ G V N +L +F +
Sbjct: 58 LM--------------------AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSE 97
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M + PN+ T + AC + IH +K+ + +V V +L+ Y C
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ EA ++F ++ +R+L++ N M+ G+ G A + F + + ++
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFH--SNTFIQNSLINMYAKCGSISDARLL 123
E L S LK+CSS G+QIH ++ GFH S+ I SL+++Y KCG + AR
Sbjct: 210 EFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR-- 267
Query: 124 FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEAL 183
+ FD + K +S++++I G Q F EA+
Sbjct: 268 -----------------------------KAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+FK + + + L ++I + F + + + ALA+KL V +++ Y
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
C V EA + F +M +++++ V++ GY K GL + +F
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 402
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 44/250 (17%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
AL S + + + QG+Q+ +LA+KL T + NS+++MY KCG + +A F
Sbjct: 314 FALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAE 373
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ D +S ++I+GY K G GK +++ +F
Sbjct: 374 MQLKDVISWTVVITGYGKHG------------LGK-------------------KSVRIF 402
Query: 187 KDMMSDSVVPNDLTLMNVISACS-----RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
+M+ ++ P+++ + V+SACS + GE +++ IK V+ V L
Sbjct: 403 YEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR 462
Query: 242 AYCLCSGVGEARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFE---RIPDKDVIS 297
A + EA+ L D MP + N+ +L+ G +++ +E+ + RI K+ +
Sbjct: 463 A----GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 518
Query: 298 WGTMIDSYTQ 307
+ M + Y Q
Sbjct: 519 YVMMSNLYGQ 528
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E L S L C+ G Q+H L +K+GF + ++ N+LI++YAKC
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE---------- 397
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
++D A +LF + K VS+ T+I G G+A +
Sbjct: 398 ---------------------KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F++ + + V ++T + + AC+ + +H LAIK V VS +L+ Y
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAK 496
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
C + A+ +F++M ++ + N +++GYS GL A + + + D+D
Sbjct: 497 CGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ SAL +C+S++S G Q+H LA+K + NSLI+MYAKCG I A+ +F
Sbjct: 449 EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN 508
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGE 181
+D S N +ISGY G A ++ DIM + C +++ ++ G +
Sbjct: 509 EMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQ 568
Query: 182 ALEVFKDMMSD 192
E F+ M+ D
Sbjct: 569 GQECFESMIRD 579
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 121/322 (37%), Gaps = 86/322 (26%)
Query: 44 QDPQHCIRIFCNARQHQNPAECE-LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF 102
QDP I +R H+ E S LK S+ +HS +KLG+ SN F
Sbjct: 128 QDP-----IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD------ 156
+ +LIN Y+ CGS+ AR +F+ D V ++S YV+ G +++ +L
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 157 IMP-------------GKGCVSYTTMIKGLVQNDCF--------------------GEAL 183
MP G G + + G + C+ +A
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 184 EVFKDMMSDS-------------------------------VVPNDLTLMNV-----ISA 207
+VF +M + VVPN+ TL ++ I
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTC 267
CS GE +H L +K+ D + VS L+ Y C + A +LF ++ +N V+
Sbjct: 363 CSGLGE-----QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 268 NVMLNGYSKTGLVDMARELFER 289
N ++ GY G A +F
Sbjct: 418 NTVIVGYENLGEGGKAFSMFRE 439
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
LD + NI+++ YVKAG +A LFD MP + VS+ T+ +G D G + ++
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHRE- 140
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ P+ T + EI C +H+ +KL D V L++AY +C V
Sbjct: 141 -GHELNPHVFTSFLKLFVSLDKAEI--CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
AR +F+ + +++V +++ Y + G + + +L
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLL 235
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 41/210 (19%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL--DPVSCNIMISGY 142
G+Q+HSL +K GF + + N+LI MY C + DA L+F+ V D V+ N++I G
Sbjct: 208 GKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG- 266
Query: 143 VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
+ G ++ E+L VF+ M+ S+ P DLT +
Sbjct: 267 ---------------------------LAGFKRD----ESLLVFRKMLEASLRPTDLTFV 295
Query: 203 NVISACS--RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
+V+ +CS G +H LAIK + LVS M Y G A ++F+ +
Sbjct: 296 SVMGSCSCAAMG-----HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLE 350
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERI 290
E++LVT N M++ Y++ L A +++R+
Sbjct: 351 EKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+L VS + SCS + G Q+H LA+K G+ T + N+ + MY+ A +F+
Sbjct: 291 DLTFVSVMGSCSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFE 347
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ D V+ N MIS Y N +L GK A+ V
Sbjct: 348 SLEEKDLVTWNTMISSY-------NQAKL-----GKS-------------------AMSV 376
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+K M V P++ T ++++ + M+ A IK + + +S L+ AY
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
+ +A LF++ +NL++ N +++G+ G E F + + +V + D+Y
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV---RILPDAY 490
Query: 306 T 306
T
Sbjct: 491 T 491
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L + L C S SS G Q H+ L+ G T I N+LINMY++CG+I ++ +F
Sbjct: 492 LSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS 551
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCV-----SYTTMIKGLVQNDCFGEAL 183
D VS N +IS Y + G+ +NA + M +G V +++ ++ E L
Sbjct: 552 EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGL 611
Query: 184 EVFKDMM 190
E+F M+
Sbjct: 612 EIFNSMV 618
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G Q+H A++ G ++ + N+L+++Y + G+++ + F D S ++S K
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 145 AGQLDNACQLFDIMPGKGCVS-YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
G ++ A ++FD MP + V+ + MI G ++ ++E+F++M V +
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK--MPE 261
++S C +G + + +H+L IK V L+ Y C V +A +F++ +
Sbjct: 196 ILSMCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 262 RNLVTCNVMLNG 273
R+ VT NV+++G
Sbjct: 255 RDQVTFNVVIDG 266
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 31/217 (14%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S +K+C+ + G ++ L +GF S+ F+ N+L++MY++ G ++ AR
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR--------- 161
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
Q+FD MP + VS+ ++I G + + EALE++ ++
Sbjct: 162 ----------------------QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ +VP+ T+ +V+ A + + +H A+K V+ +V+V+ L+ Y
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ARR+FD+M R+ V+ N M+ GY K +V+ + +F
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 57/310 (18%)
Query: 43 LQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF 102
L+ + +R+F P L + S L++C + S + I++ LK GF +
Sbjct: 286 LEMVEESVRMFLENLDQFKPDL--LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIM---- 158
++N LI++YAKCG + AR +F + D VS N +ISGY+++G L A +LF +M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 159 PGKGCVSYTTMI------------KGLVQN-----------------DCF------GEAL 183
++Y +I KGL N D + G++L
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
++F M + V T VISAC RFG+ + K V V +
Sbjct: 464 KIFSSMGTGDTV----TWNTVISACVRFGDFATGLQVTTQMRKSEV---VPDMATFLVTL 516
Query: 244 CLCSGVGEARRLFDKMP--------ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+C+ + A+RL ++ E L N ++ YSK G ++ + +FER+ +DV
Sbjct: 517 PMCASLA-AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575
Query: 296 ISWGTMIDSY 305
++W MI +Y
Sbjct: 576 VTWTGMIYAY 585
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
++ SS S+ ++ R+IH+L + LG S+ F LI+ Y+ + + +F+
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR------- 64
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
+ P K + ++I+ +N F EALE + +
Sbjct: 65 -----------------------VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK 101
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
V P+ T +VI AC+ + +++ + + + + V L+ Y + AR
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
++FD+MP R+LV+ N +++GYS G + A E++ + + SW + DS+T
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN----SW-IVPDSFT 209
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 31/212 (14%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVK 144
G+ +HS +K G + + N+LI+MYAKCG + D+ +F + D V+ N +IS V+
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
G F L+V M VVP+ T +
Sbjct: 487 FGD-------------------------------FATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+ C+ + IH ++ + + + L+ Y C + + R+F++M R++
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
VT M+ Y G + A E F + ++
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 31/141 (21%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
L C+S+++ G++IH L+ G+ S I N+LI MY+KCG + ++ +F+ D
Sbjct: 515 TLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD 574
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
V+ MI Y M G+G +ALE F DM
Sbjct: 575 VVTWTGMIYAYG--------------MYGEG-----------------EKALETFADMEK 603
Query: 192 DSVVPNDLTLMNVISACSRFG 212
+VP+ + + +I ACS G
Sbjct: 604 SGIVPDSVVFIAIIYACSHSG 624
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 38/208 (18%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
QG+ +H ALK G +S + N L+ MY K +DAR
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR---------------------- 262
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
++FD M + VSY TMI G ++ + E++ +F + + D P+ LT+ +
Sbjct: 263 ---------RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSS 312
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTN---LMHAYCLCSGVGEARRLFDKMP 260
V+ AC ++ + I+ +K G VL ST L+ Y C + AR +F+ M
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKA---GFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFE 288
++ V+ N +++GY ++G + A +LF+
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFK 397
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 34/205 (16%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C I S G IH +K GF + ++ N+L+ MYAKCG I AR
Sbjct: 202 LKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR----------- 250
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+FD++P K VS+ +M+ G + + EAL++F+ M+ +
Sbjct: 251 --------------------NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN 290
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ P+ + + +V++ F + R +H I+ ++ + V+ L+ Y +G+A
Sbjct: 291 GIEPDKVAISSVLARVLSFK---HGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQA 347
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKT 277
+FD+M ER+ V+ N +++ +SK
Sbjct: 348 CFIFDQMLERDTVSWNAIISAHSKN 372
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 97/237 (40%), Gaps = 39/237 (16%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
S L++C S+ + G ++H L +N I + L+ +YA CG A +F
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 129 VLD--PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D P + N +ISGY + GQ ++A L +
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMAL-------------------------------Y 183
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M D V P+ T V+ AC G + IH +K V V L+ Y C
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI------PDKDVIS 297
+ +AR +FD +P ++ V+ N ML GY GL+ A ++F + PDK IS
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS 300
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 41/233 (17%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
A+++ +SI S + G+QIH+ +K GF SN + NS++++Y +CG +S+A+ F
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE----- 273
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
M K +++ T+I L ++D EAL +F+ S
Sbjct: 274 --------------------------MEDKDLITWNTLISELERSDS-SEALLMFQRFES 306
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
VPN T ++++AC+ + NC + +H + + V ++ L+ Y C +
Sbjct: 307 QGFVPNCYTFTSLVAACANIAAL-NCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIP 365
Query: 251 EARRLFDKMPE-RNLVTCNVMLNGYSKTGLVDMARELFERI------PDKDVI 296
+++R+F ++ + RNLV+ M+ GY G A ELF+++ PD+ V
Sbjct: 366 DSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVF 418
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 39/296 (13%)
Query: 4 LISASFRFRIVH--RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQN 61
LI + F +V RSL E+P+ ++ W + + C Q
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK----QG 106
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
+ E L S LKSC ++ + G +H + +KLG + ++ N+++NMYA C +A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA- 165
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQ-NDCFG 180
AC +F + K V++TT+I G D G
Sbjct: 166 -----------------------------ACLIFRDIKVKNDVTWTTLITGFTHLGDGIG 196
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
L+++K M+ ++ + + A + + + IHA IK + V +++
Sbjct: 197 -GLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSIL 255
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
YC C + EA+ F +M +++L+T N +++ ++ + A +F+R + +
Sbjct: 256 DLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFV 310
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
++ N+++S Y + G ++ A LFD MP + V++T MI G ++ A E F +M+
Sbjct: 47 LATNLIVS-YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
PN+ TL +V+ +C + ++H + +KL ++G + V +M+ Y CS EA
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 253 R-RLFDKMPERNLVTCNVMLNGYSKTG 278
+F + +N VT ++ G++ G
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLG 192
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
K+ + S G +H L+ F + ++QN+L+ MY G + AR
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR------------ 172
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
+FD+M + +S+ TMI G +N +AL +F M+++S
Sbjct: 173 -------------------DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
V + T+++++ C ++ R +H L + + + V L++ Y C + EAR
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 254 RLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
+FD+M R+++T M+NGY++ G V+ A EL
Sbjct: 274 FVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
+VS L C + GR +H L + ++N+L+NMY KCG + +AR +F
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
D ++ MI+GY + G ++NA +L +M +G
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEG-------------------------- 314
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
V PN +T+ +++S C ++ + + +H A++ V +++ T+L+ Y C
Sbjct: 315 -----VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
V R+F + + + ++ G + LV A LF+R+ +DV
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 36/207 (17%)
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMIS---GYVKAGQLDNACQLFDIMPGKG 162
SL+N +A SIS + L VS +I+ + Y G + A +LF+ MP
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSS 79
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV--VPNDLTLMNVISACSRFGEIWNCRMI 220
+SY +I+ V+ + +A+ VF M+S+ V VP+ T V A GE+ + ++
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA---GELKSMKL- 135
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLV 280
GLV+ H L S G R+ N +L Y G V
Sbjct: 136 ----------GLVV------HGRILRSWFG-----------RDKYVQNALLAMYMNFGKV 168
Query: 281 DMARELFERIPDKDVISWGTMIDSYTQ 307
+MAR++F+ + ++DVISW TMI Y +
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYR 195
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 53 FCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYA 112
C Q + + + S + C + G+ +H A++ +S+ I+ SLI+MYA
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 113 KCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKG 172
KC + C + SG K + P ++ +I G
Sbjct: 366 KCKRVD---------------LCFRVFSGASK----------YHTGP------WSAIIAG 394
Query: 173 LVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL 232
VQN+ +AL +FK M + V PN TL +++ A + ++ IH K
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPE----RNLVTCNVMLNGYSKTGLVDMARELF 287
+ +T L+H Y C + A ++F+ + E +++V +++GY G A ++F
Sbjct: 455 LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVF 513
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 93/252 (36%), Gaps = 67/252 (26%)
Query: 57 RQHQNPAECELA-LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCG 115
R + E +A L S L + ++++ Q IH K GF S+ L+++Y+KCG
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 116 SISDARLLFQAC----PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIK 171
++ A +F D V +ISGY G N
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN--------------------- 508
Query: 172 GLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDG 231
AL+VF +M+ V PN++T + ++ACS G L +G
Sbjct: 509 ----------ALQVFMEMVRSGVTPNEITFTSALNACSHSG--------------LVEEG 544
Query: 232 LVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP 291
L L L H + + N TC V L G + G +D A L IP
Sbjct: 545 LTLFRFMLEH--------------YKTLARSNHYTCIVDLLG--RAGRLDEAYNLITTIP 588
Query: 292 -DKDVISWGTMI 302
+ WG ++
Sbjct: 589 FEPTSTVWGALL 600
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 38/215 (17%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L CS++ S G+QIHS +K+GF +T + N+L++MY KC
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC------------------ 373
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN----DCFGEALEVFKD 188
A +++ A ++F M VS+TT+I GLV + DCFG +E
Sbjct: 374 -----------SASEVE-ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME---- 417
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M+ V PN +TL V+ ACS+ + IHA ++ VDG ++V +L+ AY
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK 477
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
V A + M R+ +T ++ +++ G +MA
Sbjct: 478 VDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA 512
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCN---ARQHQNPAECELALVSA 72
R L E+ + T+ W I A + Q+ + +F + H N E S
Sbjct: 78 RKLFDEMSHRTVFAWTVM---ISAFTKSQEFASALSLFEEMMASGTHPN----EFTFSSV 130
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
++SC+ + S G ++H +K GF N+ + +SL ++Y+KCG
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG----------------- 173
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
Q AC+LF + +S+T MI LV + EAL+ + +M+
Sbjct: 174 --------------QFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V PN+ T + ++ A S G + + IH+ I + V++ T+L+ Y S + +A
Sbjct: 220 GVPPNEFTFVKLLGASSFLGLEFG-KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 253 RRLFDKMPERNLVTCNVMLNGY 274
R+ + E+++ +++G+
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGF 300
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVL------DPVSCNIMISGYVKAGQLDNACQLFD 156
+Q S I + + C S S L CPV+ + CN ++S Y+K + NA +LFD
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
M + ++T MI ++ F AL +F++MM+ PN+ T +V+ +C+ +I
Sbjct: 83 EMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISY 142
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLN 272
+H IK +G +V ++L Y C EA LF + + ++ +M++
Sbjct: 143 GGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 31/144 (21%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+L+L + + +++ + G+ +H ++K GF + NSL++MY+KCGS+ DA+ +F+
Sbjct: 528 QLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D VS N ++S GL N AL
Sbjct: 588 EIATPDVVSWNGLVS-------------------------------GLASNGFISSALSA 616
Query: 186 FKDMMSDSVVPNDLTLMNVISACS 209
F++M P+ +T + ++SACS
Sbjct: 617 FEEMRMKETEPDSVTFLILLSACS 640
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 10/220 (4%)
Query: 87 QIHSLALKLGFHSNTFIQNSLINMYA----KCGSISDARLLFQACPVLDPVSCNIMISGY 142
Q +S +K G N F L+ + + G + ++ + P L+ V ++ Y
Sbjct: 211 QFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP-LNVVLKTSLVDFY 269
Query: 143 VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
+ ++++A ++ + + +T+++ G V+N EA+ F +M S + PN+ T
Sbjct: 270 SQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYS 329
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG-EARRLFDKMPE 261
++S CS + + IH+ IK+ + V L+ Y CS EA R+F M
Sbjct: 330 AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS 389
Query: 262 RNLVTCNVMLNGYSKTGLVD----MARELFERIPDKDVIS 297
N+V+ ++ G G V + E+ +R + +V++
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + S L +C + +++H L++K N ++ +L+++YAKCG I D
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKD------ 215
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
A Q+F+ M K V++++M+ G VQN + EAL +
Sbjct: 216 -------------------------AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
++ S+ N TL +VI ACS + + +HA+ K V V+++ + Y
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C + E+ +F ++ E+NL N +++G++K LFE++
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 8/202 (3%)
Query: 96 GFHSNTFIQNSLIN----MYAKCGSISDARLLFQACPVLDPVS----CNIMISGYVKAGQ 147
G +SN F +L++ + A+ G++ +A+ +D N++I+ Y K G
Sbjct: 52 GRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGF 111
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
++ A Q+FD M + VS+ TMI +N EAL++F +M ++ ++ T+ +V+SA
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA 171
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTC 267
C + C+ +H L++K +D + V T L+ Y C + +A ++F+ M +++ VT
Sbjct: 172 CGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 268 NVMLNGYSKTGLVDMARELFER 289
+ M+ GY + + A L+ R
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRR 253
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 62/248 (25%)
Query: 58 QHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSI 117
Q + + + L S + +CS++++ +G+Q+H++ K GF SN F+ +S ++MYAKCGS+
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 314
Query: 118 SDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQND 177
++ ++F + N +ISG+ K +
Sbjct: 315 RESYIIFSEVQEKNLELWNTIISGFAKHARPK---------------------------- 346
Query: 178 CFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST 237
E + +F+ M D + PN++T +++S C G + R L GL S
Sbjct: 347 ---EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM--RTTYGL---SP 398
Query: 238 NLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVI 296
N++H C+ +G A GL+ A EL + IP D
Sbjct: 399 NVVHYSCMVDILGRA-------------------------GLLSEAYELIKSIPFDPTAS 433
Query: 297 SWGTMIDS 304
WG+++ S
Sbjct: 434 IWGSLLAS 441
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 261 ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
E ++ NV++N YSK G V++AR++F+ + ++ ++SW TMI YT+
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 51/278 (18%)
Query: 24 NPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECE-LALVSALKSCSSISSP 82
N TL +++ IKA L D +H R Q+P+ + +++ A+K S+ +
Sbjct: 32 NHTLKQYLESGEPIKA---LLDFRHRFR--------QSPSFVDSFSVLFAIKVSSAQKAS 80
Query: 83 S-QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
S GRQIH+L KLGF++ IQ SL+ Y+ G + AR
Sbjct: 81 SLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYAR-------------------- 120
Query: 142 YVKAGQLDNACQLFDIMPGK-GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
Q+FD P K V +T MI +N+ EA+E+FK M ++ + + +
Sbjct: 121 -----------QVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVI 169
Query: 201 LMNVISACSRFGEIWNCRMIHALAIK----LAVDGLVLVSTNLMHAYCLCSGVGEARRLF 256
+ +SAC+ G + I++ +IK LA+D + + +L++ Y +AR+LF
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD--LTLRNSLLNMYVKSGETEKARKLF 227
Query: 257 DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
D+ +++ T M+ GY+ G + ELF+++ D
Sbjct: 228 DESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID 265
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 50 IRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLIN 109
+ F R Q P E S +C+S+S G Q+H L LG + + + NS++
Sbjct: 295 VETFIKMRNSQVPPN-EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 110 MYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTM 169
MY+ CG++ A +L F M + +S++T+
Sbjct: 354 MYSTCGNLVSASVL-------------------------------FQGMRCRDIISWSTI 382
Query: 170 IKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAV 229
I G Q E + F M P D L +++S I R +HALA+ +
Sbjct: 383 IGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGL 442
Query: 230 DGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFER 289
+ V ++L++ Y C + EA +F + ++V+ M+NGY++ G A +LFE+
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSA-LK 74
R + ++P+ ++ W IK + + +F R + + +++S LK
Sbjct: 60 RQVFDKMPHGDIVSWTSI---IKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLK 116
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
+C S+ + G +H+ A+K S+ ++ +SL++MY + G I
Sbjct: 117 ACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI----------------- 159
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
D +C++F MP + V++T +I GLV + E L F +M
Sbjct: 160 --------------DKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEE 205
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
+ + T + AC+ ++ + IH I + V+ +L Y C + +
Sbjct: 206 LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC 265
Query: 255 LFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
LF+ M ER++V+ ++ Y + G A E F ++ + V
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV 306
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
ALK+C+ + G+ IH+ + GF + + NSL MY +CG + D
Sbjct: 215 ALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDG----------- 263
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
C LF+ M + VS+T++I + +A+E F M +
Sbjct: 264 -------------------LC-LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
V PN+ T ++ SAC+ + +H + L ++ + VS ++M Y C +
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS 363
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
A LF M R++++ + ++ GY + G + + F
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF 399
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
R+ Q DP N + + AG L A Q+FD MP VS+T++IK V +
Sbjct: 32 RISNQVMVKFDP---NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSD 88
Query: 181 EALEVFKDM--MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTN 238
EAL +F M + +V P+ L V+ AC + I +HA A+K ++ V V ++
Sbjct: 89 EALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSS 148
Query: 239 LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISW 298
L+ Y + ++ R+F +MP RN VT ++ G G F + + +S
Sbjct: 149 LLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS- 207
Query: 299 GTMIDSYT 306
D+YT
Sbjct: 208 ----DTYT 211
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+K+ ++ GR IH+L +K G+ + + +SL+ MYAK LF+
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN-------LFE------- 159
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
N+ Q+FD MP + S+ T+I Q+ +ALE+F M S
Sbjct: 160 -----------------NSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESS 202
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
PN ++L ISACSR + + IH +K + V++ L+ Y C + A
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA 262
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
R +F KMP ++LV N M+ GY G E+ R+
Sbjct: 263 REVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 35/245 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
++L A+ +CS + +G++IH +K GF + ++ ++L++MY KC + AR +FQ
Sbjct: 209 VSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQK 268
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
MP K V++ +MIKG V +E+
Sbjct: 269 -------------------------------MPRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M+ + P+ TL +++ ACSR + + + IH I+ V+ + V+ +L+ Y C
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI----PDKDVISWGTMI 302
A +F K + + NVM++ Y G A E+++++ DV+++ +++
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 303 DSYTQ 307
+ +Q
Sbjct: 418 PACSQ 422
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 41/268 (15%)
Query: 14 VHRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSAL 73
V R + ++P +L+ W IK D + C+ I N + + L S L
Sbjct: 261 VAREVFQKMPRKSLVAW---NSMIKGYVAKGDSKSCVEIL-NRMIIEGTRPSQTTLTSIL 316
Query: 74 KSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV 133
+CS + G+ IH ++ +++ ++ SLI++Y KCG + A +F
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE 376
Query: 134 SCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
S N+MIS Y+ G + +A+EV+ M+S
Sbjct: 377 SWNVMISSYISVGN-------------------------------WFKAVEVYDQMVSVG 405
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAI---KLAVDGLVLVSTNLMHAYCLCSGVG 250
V P+ +T +V+ ACS+ + + IH L+I +L D L+L + L+ Y C
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIH-LSISESRLETDELLL--SALLDMYSKCGNEK 462
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTG 278
EA R+F+ +P++++V+ VM++ Y G
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 34/226 (15%)
Query: 69 LVSALKSCS-SISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L+S L+ C+ S S + + +H L LG + + SLIN+Y C AR +F+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 128 PVLDPVSC-NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ V N ++SGY K N F + LEVF
Sbjct: 66 DIRSDVYIWNSLMSGYSK-------------------------------NSMFHDTLEVF 94
Query: 187 KDMMSDSV-VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
K +++ S+ VP+ T NVI A G + RMIH L +K V+V+++L+ Y
Sbjct: 95 KRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK 154
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP 291
+ + ++FD+MPER++ + N +++ + ++G + A ELF R+
Sbjct: 155 FNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ S L +CS +++ +G+QIH + ++ + ++L++MY+KCG+ +A +F +
Sbjct: 411 VTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNS 470
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
P D VS +MIS Y GQ P EAL F
Sbjct: 471 IPKKDVVSWTVMISAYGSHGQ-----------P--------------------REALYQF 499
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEI-WNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+M + P+ +TL+ V+SAC G I + + K ++ ++ H C+
Sbjct: 500 DEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPII------EHYSCM 553
Query: 246 CSGVGEARRLFD 257
+G A RL +
Sbjct: 554 IDILGRAGRLLE 565
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 38/261 (14%)
Query: 44 QDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQ-GRQIHSLALKLGFHSNTF 102
Q+ + + +F A Q +N + L+S L +C ++ S ++IH + + G H++
Sbjct: 230 QNYEMGVDLF-RAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADER 288
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
+ + + MY +CG++S +R+LF+ V D V + MISGY + G
Sbjct: 289 LTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG---------------- 332
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHA 222
DC E + + M + + N +TL+ ++SAC+ + +H+
Sbjct: 333 --------------DC-SEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHS 377
Query: 223 LAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDM 282
+K +L+ L+ Y C + AR +F ++ E++LV+ + M+N Y G
Sbjct: 378 QILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSE 437
Query: 283 ARELFERIPDKDVISWGTMID 303
A E+F K +I G +D
Sbjct: 438 ALEIF-----KGMIKGGHEVD 453
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP------VSCNIMISGYVKAGQLD 149
GF + + SL+ + + GS S +F A ++D + ++ Y+K
Sbjct: 143 GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHA 202
Query: 150 NACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACS 209
A +FD M K VS+T MI G V N + +++F+ M +++ PN +TL++V+ AC
Sbjct: 203 AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 210 R--FGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTC 267
+G + IH + + ++ M YC C V +R LF+ R++V
Sbjct: 263 ELNYGSSL-VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMW 321
Query: 268 NVMLNGYSKTG 278
+ M++GY++TG
Sbjct: 322 SSMISGYAETG 332
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 34/230 (14%)
Query: 69 LVSALKSCSSISSPSQ-GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L S +K+C+ P G Q+H L LK G +T + NSLI+MYAK R
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVR------ 102
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
++FD M + VSY ++I Q+ EA+++ K
Sbjct: 103 -------------------------KVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIK 137
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWN-CRMIHALA-IKLAVDGLVLVSTNLMHAYCL 245
+M +P + ++++ C+R G RM HAL + + VL+ST L+ Y
Sbjct: 138 EMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK 197
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
A +FD+M +N V+ M++G +M +LF + +++
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL 247
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
LA+VSA C++ + S +HS LK GF S+ + N+LI+MYAKCGS+S AR +F
Sbjct: 357 LAIVSA---CTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE 413
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D VS + MI+ Y + G G EALE+F
Sbjct: 414 LTEKDLVSWSSMINAYG--------------LHGHG-----------------SEALEIF 442
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
K M+ +D+ + ++SAC+ G + + I A G + L H C
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQA------GKYHMPVTLEHYACYI 496
Query: 247 SGVGEARRLFDKMPERNLVTCNV 269
+ +G F K+ + VT N+
Sbjct: 497 NLLGR----FGKIDDAFEVTINM 515
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK +S+ G Q+H L +K G+ N ++ +SL++MYAKC + DA F+ +
Sbjct: 108 LKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNS 167
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS N +I+G+V+ + A L +M K V TM G F L + D M
Sbjct: 168 VSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV---TMDAG-----TFAPLLTLLDDPM-- 217
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
N++ + +HA +KL + + + ++ +Y C V +A
Sbjct: 218 --------FCNLL------------KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257
Query: 253 RRLFDKM-PERNLVTCNVMLNGYSKTGLVDMARELF 287
+R+FD + ++L++ N M+ G+SK L + A ELF
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELF 293
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 64/275 (23%)
Query: 17 SLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSC 76
SL L + L+ W L +D ++ F R + + + A + L+SC
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDA---VKFFSYLRSSEIKVD-DYAFSALLRSC 418
Query: 77 SSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCN 136
S +++ G+QIH+LA K GF SN F+ +SLI MY+KCG I AR FQ
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQ----------- 467
Query: 137 IMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVP 196
I V++ MI G Q+ +L++F M + +V
Sbjct: 468 -------------------QISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 508
Query: 197 NDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLF 256
+ +T +++ACS G L +GL L+ NLM ++
Sbjct: 509 DHVTFTAILTACSHTG--------------LIQEGLELL--NLMEP------------VY 540
Query: 257 DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP 291
P V L G + GLV+ A+EL E +P
Sbjct: 541 KIQPRMEHYAAAVDLLG--RAGLVNKAKELIESMP 573
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L +CS G+ +H + +K G T N+LI+MY +
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ------------------- 352
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
G +++A LF+ + K +S+ ++I G Q +A++ F + S
Sbjct: 353 ----------FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 402
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ +D ++ +CS + + IHALA K V ++L+ Y C + A
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 253 RRLFDKMPERN-LVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
R+ F ++ ++ V N M+ GY++ GL ++ +LF ++ +++V
Sbjct: 463 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 43/192 (22%)
Query: 89 HSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQL 148
H A+K G S+ ++ N +++ Y K G + A +LF P D VS N MISGY G+L
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
++A LF M G S++ ++KG
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKG-------------------------------- 110
Query: 205 ISACSRF--GEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER 262
I++ RF GE +H L IK + V V ++L+ Y C V +A F ++ E
Sbjct: 111 IASVKRFDLGE-----QVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEP 165
Query: 263 NLVTCNVMLNGY 274
N V+ N ++ G+
Sbjct: 166 NSVSWNALIAGF 177
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC-PVLDPVSCNIMISGYVK 144
+Q+H+ LKLG I N++I+ YA CGS+SDA+ +F D +S N MI+G+ K
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
++A +LF M + V+ D + T +
Sbjct: 283 HELKESAFELF-----------IQMQRHWVETDIY--------------------TYTGL 311
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC-LCSGVGE-ARRLFDKMPER 262
+SACS + +H + IK ++ + + L+ Y +G E A LF+ + +
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Query: 263 NLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+L++ N ++ G+++ GL + A + F + ++
Sbjct: 372 DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEI 404
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 16/231 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQL 148
+K G+ + +SLIN + + + DA L + D V N +I G K G +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 149 DNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
++A +LFD M G V+Y +++ GL + + +A + +DM+ +VPN +T V
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I + G+ ++ + VD V +L++ C+ V EA+++ D M +
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
++VT N ++NG+ K+ VD +LF + + D I++ T+I Y Q
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLD 149
++GF + I N++I+ K G ++DA LF D V+ N +++G +G+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 150 NACQLF------DIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+A +L DI+P +++T +I V+ F EA++++++M V P+ T +
Sbjct: 227 DAARLMRDMVMRDIVPN--VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
+I+ G + + + L + V+ L++ +C V E +LF +M +R
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 264 LV----TCNVMLNGYSKTGLVDMARELFERIPDK 293
LV T N ++ GY + G D A+E+F R+ +
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF----QACPVLDPVSCNIMI 139
+ +Q+ L + G + N+LIN + K + + LF Q V D ++ N +I
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 140 SGYVKAGQLDNACQLFDIMPGKGCV-SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPND 198
GY +AG+ D A ++F M + + +Y+ ++ GL N +AL +F++M S + D
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK-SEIELD 415
Query: 199 LTLMN-VISACSRFGEI---WNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
+T N VI + G + W+ + +L+ K + V+ T ++ +C ++
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWD--LFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 255 LFDKMPERNLV 265
L+ KM E L+
Sbjct: 473 LYRKMQEDGLL 483
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 39/240 (16%)
Query: 58 QHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNT-FIQNSLINMYAKCGS 116
+H N A C ++ L+ C+ G+QIH ++ GF ++ SL+NMYAKCG
Sbjct: 56 EHHNVATC----IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGL 111
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
+ A L+F + Y +I G V N
Sbjct: 112 MRRAVLVFGGSE--------------------------------RDVFGYNALISGFVVN 139
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
+A+E +++M ++ ++P+ T +++ E+ + + +H LA KL D V
Sbjct: 140 GSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVG 198
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ L+ +Y V +A+++FD++P+R + V N ++NGYS+ + A +F ++ ++ V
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGV 258
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD-PVSCNIMISGYVK 144
+++H LA KLGF S+ ++ + L+ Y+K S+ DA+ +F P D V N +++GY
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY-- 237
Query: 145 AGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
Q+F F +AL VF M + V + T+ +V
Sbjct: 238 -------SQIFR----------------------FEDALLVFSKMREEGVGVSRHTITSV 268
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
+SA + G+I N R IH LA+K ++VS L+ Y + EA +F+ M ER+L
Sbjct: 269 LSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDL 328
Query: 265 VTCNVMLNGYSKTGLVDMARELFERI 290
T N +L + G D LFER+
Sbjct: 329 FTWNSVLCVHDYCGDHDGTLALFERM 354
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 41/227 (18%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
+ S L + + GR IH LA+K G S+ + N+LI+MY K + +A +F+A
Sbjct: 264 TITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
D + N ++ + G D L +F+
Sbjct: 324 DERDLFTWNSVLCVHDYCGDHDGT-------------------------------LALFE 352
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLV-------LVSTNLM 240
M+ + P+ +TL V+ C R + R IH I V GL+ + +LM
Sbjct: 353 RMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMI---VSGLLNRKSSNEFIHNSLM 409
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
Y C + +AR +FD M ++ + N+M+NGY ++A ++F
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMF 456
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 35/150 (23%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGF----HSNTFIQNSLINMYAKCGSISDARL 122
+ L + L +C ++S QGR+IH + G SN FI NSL++MY KCG + DAR+
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEA 182
+F + V D S NIMI+GY VQ+ C A
Sbjct: 424 VFDSMRVKDSASWNIMINGYG------------------------------VQS-CGELA 452
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
L++F M V P+++T + ++ ACS G
Sbjct: 453 LDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
Y K G++ A LFDIMP + VS+ TM+ G+V+ + E +E F+ M + P+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 202 MNVISACSRFGEIWNCRM-IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
++++AC R G ++ + +H K + V VST ++H Y + V +R++F++MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 261 ERNLVTCNVMLNGYSKTG 278
+RN+V+ ++ GYS G
Sbjct: 122 DRNVVSWTSLMVGYSDKG 139
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 37/241 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ SAL +C + +GR +H L + G N I N+L++MY K G +S++R +
Sbjct: 363 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
P D V+ N +I GY + D P K AL F
Sbjct: 423 MPRRDVVAWNALIGGYAE-----------DEDPDK--------------------ALAAF 451
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWN-CRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ M + V N +T+++V+SAC G++ + +HA + + V +L+ Y
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 511
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
C + ++ LF+ + RN++T N ML + G + +L ++ S+G +D +
Sbjct: 512 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-----SFGVSLDQF 566
Query: 306 T 306
+
Sbjct: 567 S 567
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNAR-QHQNPAECELALVSALK 74
R + E+P+ ++ W +P+ I I+ R + E ++LV +
Sbjct: 114 RKVFEEMPDRNVVSWTSLMVGYSDKG---EPEEVIDIYKGMRGEGVGCNENSMSLV--IS 168
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
SC + S GRQI +K G S ++NSLI+M G++ A +F D +S
Sbjct: 169 SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 228
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
N + + Y + G ++ + ++F +M F D ++ +
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLM-------------------------RRFHDEVNSTT 263
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
V TL++V+ + W R IH L +K+ D +V V L+ Y EA
Sbjct: 264 VS---TLLSVLGHVDH--QKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317
Query: 255 LFDKMPERNLVTCNVMLNGYSKTG 278
+F +MP ++L++ N ++ + G
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDG 341
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 107/267 (40%), Gaps = 36/267 (13%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R + L++P ++ W I + +DP + F R + + + +VS L +
Sbjct: 417 RRVLLQMPRRDVVAW---NALIGGYAEDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSA 472
Query: 76 CSSISSP-SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
C +G+ +H+ + GF S+ ++NSLI MYAKC
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC-------------------- 512
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
G L ++ LF+ + + +++ M+ + E L++ M S V
Sbjct: 513 -----------GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 561
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
+ + +SA ++ + + +H LA+KL + + Y C +GE +
Sbjct: 562 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 621
Query: 255 LFDKMPERNLVTCNVMLNGYSKTGLVD 281
+ R+L + N++++ + G +
Sbjct: 622 MLPPSVNRSLPSWNILISALGRHGYFE 648
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 31/204 (15%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+G Q+H K G S+ ++ +++++Y G +S +R
Sbjct: 77 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR---------------------- 114
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
++F+ MP + VS+T+++ G E ++++K M + V N+ ++
Sbjct: 115 ---------KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 165
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
VIS+C + R I +K ++ + V +L+ V A +FD+M ER+
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 225
Query: 264 LVTCNVMLNGYSKTGLVDMARELF 287
++ N + Y++ G ++ + +F
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIF 249
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 31/147 (21%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ + L + + ++ +G+Q+H LA+KLGF ++FI N+ +MY+KCG I + +
Sbjct: 565 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP 624
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
S NI+IS + G + C
Sbjct: 625 PSVNRSLPSWNILISALGRHGYFEEVCA-------------------------------T 653
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFG 212
F +M+ + P +T +++++ACS G
Sbjct: 654 FHEMLEMGIKPGHVTFVSLLTACSHGG 680
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ + + L + S++ + G+Q H+ ++ G + + LI+MY+K G I ++ LF+
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEG 478
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
SGY + Q ++ +MI G QN + VF
Sbjct: 479 -------------SGYAERDQ----------------ATWNSMISGYTQNGHTEKTFLVF 509
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ M+ ++ PN +T+ +++ ACS+ G + + +H +I+ +D V V++ L+ Y
Sbjct: 510 RKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKA 569
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ A +F + ERN VT M+ GY + G+ + A LF
Sbjct: 570 GAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 34/287 (11%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECE-LALVSALK 74
R L +P PT + W +L P + + ++ C+ S LK
Sbjct: 59 RQLFDAIPKPTTVLWNTIIIGFICNNL---PHEALLFYSRMKKTAPFTNCDAYTYSSTLK 115
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
+C+ + G+ +H ++ +S+ + NSL+NMY C + D C D V
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD-------CFEYDVVR 168
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
++FD M K V++ T+I V+ EA F MM V
Sbjct: 169 ------------------KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA---VDGLVLVSTNLMHAYCLCSGVGE 251
P+ ++ +NV A S I + + L +KL V L +VS+ + Y +
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAI-SMYAELGDIES 269
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF-ERIPDKDVIS 297
+RR+FD ERN+ N M+ Y + + + ELF E I K+++S
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLG--FHSNTFIQNSLINMYAKCGSISDARLLF 124
++ V+ + S S + + L LKLG + + F+ +S I+MYA+ G I +R +F
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVF 274
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+C V NI + + TMI VQNDC E++E
Sbjct: 275 DSC-----VERNIEV--------------------------WNTMIGVYVQNDCLVESIE 303
Query: 185 VFKDMM-SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+F + + S +V +++T + SA S ++ R H K + +++ +LM Y
Sbjct: 304 LFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMY 363
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVD 281
C V ++ +F M ER++V+ N M++ + + GL D
Sbjct: 364 SRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 48 HCIRIFCNARQ--HQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
H + F R+ QN + + S L +CS I S G+Q+H +++ N F+ +
Sbjct: 501 HTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS 560
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG--- 162
+L++MY+K G+I A +F + V+ MI GY + G + A LF M G
Sbjct: 561 ALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP 620
Query: 163 -CVSYTTMIKGLVQNDCFGEALEVFKDM 189
+++ ++ + E L++F++M
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 119/307 (38%), Gaps = 54/307 (17%)
Query: 48 HCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF----- 102
I +F A + E+ + A + S++ GRQ H GF S F
Sbjct: 300 ESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH------GFVSKNFRELPI 353
Query: 103 -IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK 161
I NSL+ MY++CGS+ + +F + D VS N MIS +V+ G D L M +
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 162 GC-VSYTTMIKGL-----VQNDCFGEALEVFK---------------DMMSDS-VVPNDL 199
G + Y T+ L ++N G+ F DM S S ++
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQ 473
Query: 200 TLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC------------LCS 247
L R WN MI + LV ++ CS
Sbjct: 474 KLFEGSGYAERDQATWNS-MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACS 532
Query: 248 GVGE---ARRL----FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGT 300
+G ++L + ++N+ + +++ YSK G + A ++F + +++ +++ T
Sbjct: 533 QIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTT 592
Query: 301 MIDSYTQ 307
MI Y Q
Sbjct: 593 MILGYGQ 599
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 128 PVLDPVSCNIM--ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
P L P + +I +S + G A QLFD +P V + T+I G + N+ EAL
Sbjct: 33 PTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLF 92
Query: 186 FKDMMSDSVVPN--DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+ M + N T + + AC+ + + +H I+ + +V +LM+ Y
Sbjct: 93 YSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 244 CLCSGVGE------ARRLFDKMPERNLVTCNVMLNGYSKTG 278
C + R++FD M +N+V N +++ Y KTG
Sbjct: 153 VSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTG 193
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
+K+C+ +S G +H L +K G + F+ N+L++ Y G ++DA LF
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF-------- 245
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
DIMP + VS+ +MI+ N E+ + +MM +
Sbjct: 246 -----------------------DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEE 282
Query: 193 ----SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
+ +P+ TL+ V+ C+R EI + +H A+KL +D ++++ LM Y C
Sbjct: 283 NGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 342
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
+ A+ +F +N+V+ N M+ G+S G
Sbjct: 343 ITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L +CS + S G+++H ++ + F+ S++++Y CG +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL------------- 547
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
C + LFD M K VS+ T+I G +QN AL VF+ M+
Sbjct: 548 ----CTVQ--------------ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ +++M V ACS + R HA A+K ++ ++ +L+ Y +
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
++ ++F+ + E++ + N M+ GY GL A +LFE +
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D V C +I+ Y G D++ +FD + K + +I +N+ + E LE F +M+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 191 SDS-VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
S + ++P+ T VI AC+ ++ +H L +K + V V L+ Y V
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVD 281
+A +LFD MPERNLV+ N M+ +S G +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 82/162 (50%)
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
V + + N ++ Y K G L A ++F + K S+ +I G Q++ +L+
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M ++P+ T+ +++SACS+ + + +H I+ ++ + V +++ Y C
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ + LFD M +++LV+ N ++ GY + G D A +F ++
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
LV+ L C+ G+ +H A+KL + N+L++MY+KCG I++A+++F+
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
+ VS N M+ G+ G FD++ M+ G
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGT---FDVL--------RQMLAG--------------- 387
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
+ V +++T++N + C + + + +H ++K LV+ + +Y C
Sbjct: 388 ---GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKT 277
+ A+R+F + + + + N ++ G++++
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 38/192 (19%)
Query: 65 CELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF 124
C ++++ +CS + S GR+ H+ ALK + FI SLI+MYAK GSI+ + +F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
S N MI GY I GL + EA++
Sbjct: 656 NGLKEKSTASWNAMIMGY--------------------------GIHGLAK-----EAIK 684
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWN-CRMIHALAIKLAVDGLVLVSTNLMHAY 243
+F++M P+DLT + V++AC+ G I R + + + NL H
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG------LKPNLKHYA 738
Query: 244 CLCSGVGEARRL 255
C+ +G A +L
Sbjct: 739 CVIDMLGRAGQL 750
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 111 YAKCGSISDARLLF--QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTT 168
Y + G A L+ Q+ D N +I+ YVK + A +LFD+MP + VS+
Sbjct: 46 YLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 169 MIKGLVQNDCFG-EALEVFKDMM-SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
M+KG QN F E L++FK M S PN+ V +CS G I + H +K
Sbjct: 106 MMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLK 164
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
+ V L++ Y LCSG GEA R+ D +P +L + L+GY + G ++
Sbjct: 165 YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDV 224
Query: 287 FERIPDKDVISWGTM 301
+ ++D + W +
Sbjct: 225 LRKTANEDFV-WNNL 238
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L +S+L+ S++ + Q+HS ++ GF++ +LINMY KCG + A+ +F
Sbjct: 238 LTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD- 296
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
D + NI ++ TT++ Q+ F EAL +F
Sbjct: 297 ----DTHAQNIFLN--------------------------TTIMDAYFQDKSFEEALNLF 326
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M + V PN+ T ++++ + + ++H L +K V+V L++ Y
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ +AR+ F M R++VT N M++G S GL A E F+R+
Sbjct: 387 GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 101/244 (41%), Gaps = 64/244 (26%)
Query: 62 PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR 121
P E A++ L S + +S QG +H L LK G+ ++ + N+L+NMYAK GSI DAR
Sbjct: 336 PNEYTFAIL--LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
F D V+ N MIS GC + GL + E
Sbjct: 394 KAFSGMTFRDIVTWNTMIS---------------------GCSHH-----GLGR-----E 422
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
ALE F M+ +PN +T + V+ ACS G V L +
Sbjct: 423 ALEAFDRMIFTGEIPNRITFIGVLQACSHIG---------------------FVEQGLHY 461
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISWGT 300
+ + FD P+ TC V L SK G+ A + P + DV++W T
Sbjct: 462 -------FNQLMKKFDVQPDIQHYTCIVGL--LSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 301 MIDS 304
++++
Sbjct: 513 LLNA 516
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 31/230 (13%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E KSCS+ +G+Q H LK G S+ F++N+L+ MY+ C +A +
Sbjct: 136 EFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLD 195
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
P D + +SGY++ G F E L+V
Sbjct: 196 DLPYCDLSVFSSALSGYLECG-------------------------------AFKEGLDV 224
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ ++ V N+LT ++ + S ++ +H+ ++ + V L++ Y
Sbjct: 225 LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGK 284
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C V A+R+FD +N+ +++ Y + + A LF ++ K+V
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
SA K+C ++S P G+Q+ A K G SN+ + NS+I+M+
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF--------------- 418
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
VK+ ++++A + F+ + K VSY T + G +N F +A ++
Sbjct: 419 ----------------VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
++ + + T +++S + G I IH+ +KL + V L+ Y C
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ A R+F+ M RN+++ M+ G++K G E F ++ ++ V
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 39/255 (15%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
P+ IR F + ++ + L S +C+ + + S G+Q+HS A++ G + ++
Sbjct: 250 PREAIRFFLDMVLSGFESD-KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VEC 306
Query: 106 SLINMYAKC---GSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
SL++MYAKC GS+ D R ++FD M
Sbjct: 307 SLVDMYAKCSADGSVDDCR-------------------------------KVFDRMEDHS 335
Query: 163 CVSYTTMIKGLVQN-DCFGEALEVFKDMMSDS-VVPNDLTLMNVISACSRFGEIWNCRMI 220
+S+T +I G ++N + EA+ +F +M++ V PN T + AC + + +
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLV 280
A K + V+ +++ + + +A+R F+ + E+NLV+ N L+G +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 281 DMARELFERIPDKDV 295
+ A +L I ++++
Sbjct: 456 EQAFKLLSEITEREL 470
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 31/146 (21%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
S L +++ S +G QIHS +KLG N
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN-------------------------- 508
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
PV CN +IS Y K G +D A ++F+ M + +S+T+MI G ++ LE F
Sbjct: 509 ----QPV-CNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFG 212
M+ + V PN++T + ++SACS G
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVG 589
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 133 VSCNIMISGYVKA-GQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
V C+ +I +VK +NA ++FD M V++T MI +Q EA+ F DM+
Sbjct: 204 VGCS-LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL 262
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG-VG 250
+ TL +V SAC+ + + +H+ AI+ + V S M+A C G V
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVD 322
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSK 276
+ R++FD+M + ++++ ++ GY K
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMK 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Query: 113 KCGSISDARLL-FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG---CVSYTT 168
+ G + ARL+ F P D V N +IS Y K+G A +F+ M G VS++
Sbjct: 79 RLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSA 136
Query: 169 MIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA 228
M+ N +A++VF + + +VPND VI ACS + R+ +K
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 229 -VDGLVLVSTNLMHAYCLCSGVGE-ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
+ V V +L+ + E A ++FDKM E N+VT +M+ + G A
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 287 F 287
F
Sbjct: 257 F 257
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 38/205 (18%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LK+C ++ G +IH LALK GF + ++ SLI++Y++ ++ +AR+LF PV
Sbjct: 158 SVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D S N MISGY ++G A T+ GL D
Sbjct: 215 DMGSWNAMISGYCQSGNAKEAL---------------TLSNGLRAMD------------- 246
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+T+++++SAC+ G+ IH+ +IK ++ + VS L+ Y +
Sbjct: 247 -------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 251 EARRLFDKMPERNLVTCNVMLNGYS 275
+ +++FD+M R+L++ N ++ Y
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYE 324
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 38/235 (16%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ +VS L +C+ ++G IHS ++K G S F+ N LI++YA+ G + D + +F
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
V D +S N ++IK N+ A+ +F
Sbjct: 308 MYVRDLISWN-------------------------------SIIKAYELNEQPLRAISLF 336
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHA---- 242
++M + P+ LTL+++ S S+ G+I CR + ++ G L + +A
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR---KGWFLEDITIGNAVVVM 393
Query: 243 YCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
Y V AR +F+ +P ++++ N +++GY++ G A E++ + ++ I+
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
N I L+N+Y G+++ AR F D + N+MISGY +AG + F +
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF- 143
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
M+S + P+ T +V+ AC + +
Sbjct: 144 -----------------------------MLSSGLTPDYRTFPSVLKACR---TVIDGNK 171
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
IH LA+K V V+ +L+H Y VG AR LFD+MP R++ + N M++GY ++G
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
LPN ++ W I + I ++ + A + VS L +CS +
Sbjct: 410 LPNTDVISW---NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
QG ++H LK G + + F+ SL +MY KCG + DA LF P ++ V N +I
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI-- 524
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
AC F G G +A+ +FK+M+ + V P+ +T
Sbjct: 525 ---------ACHGFH---GHG-----------------EKAVMLFKEMLDEGVKPDHITF 555
Query: 202 MNVISACSRFG 212
+ ++SACS G
Sbjct: 556 VTLLSACSHSG 566
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 65/268 (24%)
Query: 37 IKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
IKA L + P I +F R + +C L L+S S + R + L+ G
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDC-LTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 97 -FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLF 155
F + I N+++ MYAK G + D+A +F
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLV-------------------------------DSARAVF 407
Query: 156 DIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS-VVPNDLTLMNVISACSRFGEI 214
+ +P +S+ T+I G QN EA+E++ M + + N T ++V+ ACS+ G +
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 215 WNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGY 274
+H +K +GL L ++ + + Y
Sbjct: 468 RQGMKLHGRLLK---NGLYL----------------------------DVFVVTSLADMY 496
Query: 275 SKTGLVDMARELFERIPDKDVISWGTMI 302
K G ++ A LF +IP + + W T+I
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLI 524
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 70 VSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
+ ALK CS + Q IH ++ GF SN +++ LI++Y K G + AR LF
Sbjct: 16 LKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK 75
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
D VS MIS + + G P +AL +FK+M
Sbjct: 76 RDVVSWTAMISRFSRCG----------YHP---------------------DALLLFKEM 104
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ V N T +V+ +C G + IH K G ++V + L+ Y C +
Sbjct: 105 HREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKM 164
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
EAR FD M ER+LV+ N M++GY+ D + LF+
Sbjct: 165 EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQ 203
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LKSC + +G QIH K N ++++L+++YA+CG + +ARL F +
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER 177
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D VS N MI GY D + LF +M +G + DCF F ++
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLMLTEG-----------KKPDCF-----TFGSLL 221
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
S+V L +++ +H LAIKL + +L++AY C +
Sbjct: 222 RASIVVKCLEIVS---------------ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSK 276
A +L + +R+L++C ++ G+S+
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQ 292
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 32/149 (21%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLG-FHSNTFIQNSLINMYAKCGSISDARLLF 124
E+ + S LK C++I+S + GRQIH ALK + + NSLI+MYAK G I DA L F
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ D S +I+GY + G F +A++
Sbjct: 376 EEMKEKDVRSWTSLIAGYGRHGN-------------------------------FEKAID 404
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGE 213
++ M + + PND+T ++++SACS G+
Sbjct: 405 LYNRMEHERIKPNDVTFLSLLSACSHTGQ 433
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 87 QIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAG 146
++H LA+KLGF ++ + SL+N Y KC G
Sbjct: 235 ELHGLAIKLGFGRSSALIRSLVNAYVKC-------------------------------G 263
Query: 147 QLDNACQLFDIMPGKGCVSYTTMIKGLVQ-NDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
L NA +L + + +S T +I G Q N+C +A ++FKDM+ +++ + +++
Sbjct: 264 SLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSML 323
Query: 206 SACSRFGEIWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
C+ + R IH A+K + + V + +L+ Y + +A F++M E+++
Sbjct: 324 KICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDV 383
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ ++ GY + G + A +L+ R+ + +
Sbjct: 384 RSWTSLIAGYGRHGNFEKAIDLYNRMEHERI 414
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 68/274 (24%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
K+C S +G+QIH + K+GF+ + ++QNSL++ Y CG +A +F PV D
Sbjct: 113 FKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDV 172
Query: 133 VSCNIMISGYVKAGQLDNACQLF---DIMP------------GK-GCVSYTTMIKGLVQN 176
VS +I+G+ + G A F D+ P G+ GC+S I GL+
Sbjct: 173 VSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILK 232
Query: 177 DC---------------------------FG------------------------EALEV 185
FG EA+++
Sbjct: 233 RASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDL 292
Query: 186 FKDMMSDS-VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
F M + S + P+ L +V+SAC+ G + + R +H + + + T ++ Y
Sbjct: 293 FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYA 352
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
C + A +F+ + +N+ T N +L G + G
Sbjct: 353 KCGYIETALEIFNGIRSKNVFTWNALLGGLAIHG 386
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 42/224 (18%)
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
L+ + ++ + N +I YVK QL +A ++F + K VS+ +MI GLV + E
Sbjct: 229 LILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKE 288
Query: 182 ALEVFKDMMSDS-VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
A+++F M + S + P+ L +V+SAC+ G + + R +H + + + T ++
Sbjct: 289 AIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIV 348
Query: 241 HAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS------------------------- 275
Y C + A +F+ + +N+ T N +L G +
Sbjct: 349 DMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLV 408
Query: 276 ----------KTGLVDMARELFERIPDKD------VISWGTMID 303
TGLVD R F ++ ++ + +G MID
Sbjct: 409 TFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMID 452
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
SY T++ D + +K +S+ P+ T V AC +F I + IH +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
K+ + V +L+H Y +C A ++F +MP R++V+ ++ G+++TGL A
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 285 ELFERI 290
+ F ++
Sbjct: 193 DTFSKM 198
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 86/231 (37%), Gaps = 72/231 (31%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L S L +C+S+ + GR +H L G +T I ++++MYAKCG I
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYI----------- 357
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
+ A ++F+ + K ++ ++ GL + E+L F++
Sbjct: 358 --------------------ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEE 397
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M+ PN +T + ++AC C
Sbjct: 398 MVKLGFKPNLVTFLAALNAC-----------------------------------CHTGL 422
Query: 249 VGEARRLFDKMPER------NLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
V E RR F KM R L M++ + GL+D A EL + +P K
Sbjct: 423 VDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 31/267 (11%)
Query: 24 NPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPS 83
NPTL I+A SL Q P R+F + R++ + L+ ALK C
Sbjct: 74 NPTL---SHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL 130
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
G QIH GF S++ + +L+++Y+ C + +DA +F P D VS N++ S Y+
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+ + + LFD M +ND G V P+ +T +
Sbjct: 191 RNKRTRDVLVLFDKM----------------KNDVDG------------CVKPDGVTCLL 222
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
+ AC+ G + + +H + + G + +S L+ Y C + +A ++F M ERN
Sbjct: 223 ALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERN 282
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERI 290
+V+ +++G + G A E F +
Sbjct: 283 VVSWTALISGLAMNGFGKEAIEAFNEM 309
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
Q Q+ + K G +++ SL+N+Y K G ++ A++LF P D V N +I GY
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+ G +A +LF +M +G P+ TL+N
Sbjct: 128 RNGYECDAWKLFIVMLQQG-------------------------------FSPSATTLVN 156
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
++ C + G + R +H +A K ++ V L+ Y C+ +G A LF +M +++
Sbjct: 157 LLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
V+ N M+ YS++GL + A +F+ + +K+V
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
LV+ L C SQGR +H +A K G ++ ++N+LI+ Y+KC + A +LF+
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREM 212
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
VS N MI Y ++G + EA+ VFK
Sbjct: 213 KDKSTVSWNTMIGAYSQSGLQE-------------------------------EAITVFK 241
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
+M +V + +T++N++SA +H L +K + + V T+L+ AY C
Sbjct: 242 NMFEKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCG 295
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFER 289
+ A RL+ + ++V +++ Y++ G +D+A F +
Sbjct: 296 CLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 337
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ALV L C S G +H A+K G + T + N LI MY+K + LF+
Sbjct: 348 VALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE- 406
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
QL P +S+ ++I G VQ+ A EVF
Sbjct: 407 --------------------QLQET-------P---LISWNSVISGCVQSGRASTAFEVF 436
Query: 187 KDMM-SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
MM + ++P+ +T+ ++++ CS+ + + +H ++ + V T L+ Y
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
C +A +F + T N M++GYS +GL A + + +K +
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGL 546
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM--IHAL 223
+ +++K + + + +F+D++ S+ PN T+ + A + + ++ +
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH 75
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
K +D V V T+L++ Y V A+ LFD+MPER+ V N ++ GYS+ G A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 284 RELF 287
+LF
Sbjct: 136 WKLF 139
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
S ++ C+ + G ++S +KLG+ N +Q S++ MY+ CG + AR
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR------- 254
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
++FD + + V++ TMI G ++ND + L F++
Sbjct: 255 ------------------------RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRN 290
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
M+ V P T V++ CS+ G ++IHA I + + L+ YC C
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ EA +F ++ NLV+ N +++G S+ G + A ++ R+
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 83 SQGRQIHSLALKLGFHSNTF------IQNSLINMYAKCGSISDARLLFQ----------A 126
S G +HS +KLG F I +S++ + KC SI+ + Q
Sbjct: 67 SMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAG 126
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE-ALEV 185
P + N +IS YV+ G L+ A ++FD MP + VSY + +N F A +
Sbjct: 127 AATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPL 186
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
M + V PN T +++ C+ ++ +++ IKL V+V T+++ Y
Sbjct: 187 TTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSS 246
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVD 281
C + ARR+FD + R+ V N M+ G K ++
Sbjct: 247 CGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 111/283 (39%), Gaps = 39/283 (13%)
Query: 24 NPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPS 83
NP L+ W I S + + ++ + P E +A+ + +
Sbjct: 363 NPNLVSW---NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFV 419
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
G+ +H KLG+ + F+ +L++MY
Sbjct: 420 HGKLLHGQVTKLGYERSVFVGTTLLSMY-------------------------------F 448
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
K + ++A ++FD+M + V +T MI G + A++ F +M + + +L +
Sbjct: 449 KNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSS 508
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
VI ACS + + H LAI+ D ++ V L+ Y A +F +
Sbjct: 509 VIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPD 568
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
L N ML YS+ G+V+ A FE+I + G M D+ T
Sbjct: 569 LKCWNSMLGAYSQHGMVEKALSFFEQILEN-----GFMPDAVT 606
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 34/228 (14%)
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA 120
+P + ++V L CS + S S G+ IH+ + ++ + N+L++MY CG + +A
Sbjct: 297 DPTQFTYSIV--LNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
+F G++ N VS+ ++I G +N
Sbjct: 355 FYVF---------------------GRIHNP----------NLVSWNSIISGCSENGFGE 383
Query: 181 EALEVFKDMMSDSV-VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNL 239
+A+ +++ ++ S P++ T ISA + + +++H KL + V V T L
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTL 443
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
+ Y A+++FD M ER++V M+ G+S+ G ++A + F
Sbjct: 444 LSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS---------YTTMIKGLVQNDCFGEA 182
P + N +IS YV+ L+ A ++FD MP + V+ Y +M L +
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 183 LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLV---LVSTNL 239
++ M + + +++ + C + R IHAL + + NL
Sbjct: 82 FQMIFFMPLNEIAS---SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
+ Y C + +AR++FDKMP RN+V+ N + + YS+
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR 175
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 11/240 (4%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E +ALKSC ++ +Q+HS+ +++G+ N ++ +SL+ YAK ++DA LL
Sbjct: 416 EYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD 471
Query: 126 -ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
A V NI+ Y + GQ + +L + VS+ I ++D E +E
Sbjct: 472 WASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIE 531
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD-GLVLVSTNLMHAY 243
+FK M+ ++ P+ T ++++S CS+ ++ IH L K V L+ Y
Sbjct: 532 LFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMY 591
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMID 303
C + ++F++ E+NL+T ++ S G+ +E E+ K+ +S G D
Sbjct: 592 GKCGSIRSVMKVFEETREKNLITWTALI---SCLGIHGYGQEALEKF--KETLSLGFKPD 646
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 31/210 (14%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E + + LK S + +Q+H A K G + NSLI+ Y KCG+ A +FQ
Sbjct: 215 ESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQ 274
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
D VS N +I K+ A +LF MP G
Sbjct: 275 DAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG----------------------- 311
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
PN T ++V+ S + R IH + IK + +++ L+ Y
Sbjct: 312 --------FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK 363
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
C + ++R FD + ++N+V N +L+GY+
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLSGYA 393
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 44 QDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFI 103
++P +++F + +H + VS L S + S GRQIH + +K G + +
Sbjct: 295 ENPLKALKLFVSMPEHGFSPN-QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVL 353
Query: 104 QNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC 163
N+LI+ YAKCG++ D+RL F + V N ++SGY G C
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-------------DGPIC 400
Query: 164 VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHAL 223
+S +F M+ P + T + +C + + +H++
Sbjct: 401 LS-------------------LFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSV 437
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFD-KMPERNLVTCNVMLNGYSKTGLVDM 282
+++ + V ++LM +Y + +A L D ++V N++ YS+ G
Sbjct: 438 IVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHE 497
Query: 283 ARELFERIPDKDVISWGTMI 302
+ +L + D +SW I
Sbjct: 498 SVKLISTLEQPDTVSWNIAI 517
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 106 SLINMYAKCGSISDARLL----FQACPVL-DPVS-CNIMISGYVKAGQLDNACQLFDIMP 159
SL+N+ K S + + L C VL PV CN +IS Y K G++ A ++FD MP
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 160 GKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRM 219
+ VS+ T+IKG + +A VF +M +PN T+ ++S S ++
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQ 134
Query: 220 IHALAIKLAVD-GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
+H L++K + V T L+ Y + A ++F+ MP ++L T N M++ G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 279 LVDMARELFERI 290
+ F +
Sbjct: 195 FLKECMFFFREL 206
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 36/220 (16%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L+SC+ +S R +H +K G S+ F++++LI+++AK G DA
Sbjct: 167 SVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA---------- 213
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
+FD M + + ++I G QN ALE+FK M
Sbjct: 214 ---------------------LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+ TL +V+ AC+ + H +K D ++++ L+ YC C +
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQD--LILNNALVDMYCKCGSLE 310
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+A R+F++M ER+++T + M++G ++ G A +LFER+
Sbjct: 311 DALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
N++I+ YVK L++A QLFD MP + +S+TTMI + +ALE+ M+ D+V
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
PN T +V+ +C+ ++ RM+H IK ++ V V + L+ + +A +
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 256 FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
FD+M + + N ++ G+++ D+A ELF+R+ I+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 64/238 (26%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ L S L++C+ ++ G Q H +K + + + N+L++MY KCGS
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS--------- 308
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
L++A ++F+ M + ++++TMI GL QN EAL++
Sbjct: 309 ----------------------LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+ M S PN +T++ V+ ACS G L DG +
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAG--------------LLEDGWYYFRS-------- 384
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISWGTMI 302
++L+ P R C + L G K G +D A +L + + D ++W T++
Sbjct: 385 ------MKKLYGIDPVREHYGCMIDLLG--KAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 36/255 (14%)
Query: 44 QDPQHCIRIFCN-ARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF 102
+ P I+++ R P L +V +K+ I + G+++HS+A++LGF + F
Sbjct: 96 ESPLDAIQVYLGMVRSTVLPDRYSLPIV--IKAAVQIHDFTLGKELHSVAVRLGFVGDEF 153
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
++ I +Y K AG+ +NA ++FD P +
Sbjct: 154 CESGFITLYCK-------------------------------AGEFENARKVFDENPERK 182
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIH- 221
S+ +I GL EA+E+F DM + P+D T+++V ++C G++ +H
Sbjct: 183 LGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHK 242
Query: 222 -ALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLV 280
L K +++ +L+ Y C + A +F++M +RN+V+ + M+ GY+ G
Sbjct: 243 CVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNT 302
Query: 281 DMARELFERIPDKDV 295
A E F ++ + V
Sbjct: 303 LEALECFRQMREFGV 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 21/195 (10%)
Query: 106 SLINMYAKCGSISDARLLFQACPVL---------DPVSCNIMISGYVKAGQLDNACQLFD 156
+++++ A CG + D L FQ + D + N +I Y K G++D A +F+
Sbjct: 220 TMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE 279
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
M + VS+++MI G N EALE F+ M V PN +T + V+SAC G +
Sbjct: 280 EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLC------SGVGEARRLFDKMPER-NLVTCNV 269
+ A+ + + L H C+ + EA+++ ++MP + N++
Sbjct: 340 GKTYFAM-----MKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 270 MLNGYSKTGLVDMAR 284
++ G K G V+MA
Sbjct: 395 LMGGCEKFGDVEMAE 409
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 65/122 (53%)
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+ +++ ++++ +A++V+ M+ +V+P+ +L VI A + + + +H++A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
+L G + + YC AR++FD+ PER L + N ++ G + G + A E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 286 LF 287
+F
Sbjct: 205 MF 206
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C+S + GRQI LK GF + ++ N+LI++Y C SDAR +F
Sbjct: 120 LKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVF-------- 171
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
D M + VS+ +++ LV+N E F +M+
Sbjct: 172 -----------------------DEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK 208
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
P++ T++ ++SAC G + +++H+ + ++ + T L+ Y G+ A
Sbjct: 209 RFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
R +F++M ++N+ T + M+ G ++ G + A +LF ++
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALA 224
++ + +G +D E++ V+ +M + PN LT ++ AC+ F + R I
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 225 IKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAR 284
+K D V V NL+H Y C +AR++FD+M ERN+V+ N ++ + G +++
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 285 ELF 287
E F
Sbjct: 200 ECF 202
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Query: 104 QNSLINMYAKCG-SISDARLLFQACPVLD-PVSCNI---MISGYVKAGQLDNACQLFDIM 158
+ +++ + + CG ++S +L+ V + ++C + ++ Y K+G L+ A +F+ M
Sbjct: 214 ETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM 273
Query: 159 PGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV-PNDLTLMNVISACSRFG 212
K +++ MI GL Q EAL++F MM +S V PN +T + V+ ACS G
Sbjct: 274 VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTG 328
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 33/243 (13%)
Query: 66 ELALVSA-LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF 124
+L L++A L+ C + + +G I + +K G N FI N++I+MY +SDA +F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ V+ M+SGY G+ P K A+E
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGK-----------PNK--------------------AIE 92
Query: 185 VFKDMM-SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+++ M+ S+ N+ V+ AC G+I +++ K + G V++ +++ Y
Sbjct: 93 LYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMY 152
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMID 303
+ EA F ++ + + N +++GY K GL+D A LF R+P +V+SW +I
Sbjct: 153 VKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLIS 212
Query: 304 SYT 306
+
Sbjct: 213 GFV 215
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK CSS++S G+QIH L +K G+ S +P
Sbjct: 450 LKVCSSLASLGWGKQIHGLCIKKGYES-------------------------------EP 478
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
V+ ++ YVK G++DN LFD M + VS+T +I G QN EA F M++
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG-- 250
+ PN +T + ++SAC G + R L + GL L H YC+ +G
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEAR--STLETMKSEYGL---EPYLEHYYCVVDLLGQA 593
Query: 251 ----EARRLFDKM---PERNLVTCNVMLNGYSK-TGLVD-MARELFERIPD 292
EA L +KM P++ + T + G K GLV +A +L + PD
Sbjct: 594 GLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPD 644
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L ALK C + + G Q+HSL + G+ + + + L++++A G+I D
Sbjct: 345 LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQD--------- 395
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKD 188
A +LF +P K ++++ +I+G V++ A +F++
Sbjct: 396 ----------------------AHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 189 MMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
++ + + + N++ CS + + IH L IK + + +T L+ Y C
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ LFD M ER++V+ ++ G+ + G V+ A F ++
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 123/309 (39%), Gaps = 16/309 (5%)
Query: 4 LISASFRFRIV---HRSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQ 60
+IS FR++ H+ E+ ++ W + P I ++ +
Sbjct: 46 VISMYVDFRLLSDAHKVFD-EMSERNIVTWTTMVSGYTSDG---KPNKAIELYRRMLDSE 101
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA 120
A E + LK+C + G ++ K + + NS+++MY K G + +A
Sbjct: 102 EEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEA 161
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
F+ S N +ISGY KAG +D A LF MP VS+ +I G V
Sbjct: 162 NSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-P 220
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM 240
ALE M + +V + L + ACS G + + +H +K ++ + L+
Sbjct: 221 RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALI 280
Query: 241 HAYCLCSGVGEARRLFDKMP---ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
Y C + A +F + ++ N ML+G+ + A L +I D+
Sbjct: 281 DMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC- 339
Query: 298 WGTMIDSYT 306
DSYT
Sbjct: 340 ----FDSYT 344
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 46/240 (19%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFH-SNTFIQNSLINMYAKCGSISDARLLFQAC 127
+S L CS S G+QIH LK+GF S+ +Q++LI+MY KC I ++ LL+Q+
Sbjct: 318 FMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSL 377
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEAL 183
P L+ CN +++ + G + ++F +M +G V+ +T++K L +
Sbjct: 378 PCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS------- 430
Query: 184 EVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAY 243
+P L +C ++H AIK V VS +L+ AY
Sbjct: 431 -----------LPESL---------------HSCTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 244 CLCSGVGE-ARRLFDKMPERNLVTCNVMLNGYSKTGL----VDMAREL--FERIPDKDVI 296
SG E +R++FD++ N+ ++NGY++ G+ V M RE+ IPD+ I
Sbjct: 465 TK-SGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTI 523
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 38/236 (16%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFH-SNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
++ CS +G+Q+HSL +K G++ SN F+ N L++ Y+ CG +
Sbjct: 220 IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL-------------- 265
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
SG +++ F+ +P K +S+ +++ ++L++F M
Sbjct: 266 --------SGSMRS---------FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF 308
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVL-VSTNLMHAYCLCSGVG 250
P+ M+ ++ CSR +I + + IH +K+ D L V + L+ Y C+G+
Sbjct: 309 WGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIE 368
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+ L+ +P NL CN ++ G+ E+F + D+ GT ID T
Sbjct: 369 NSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE-----GTGIDEVT 419
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
N I +K+G L +A + FD M + V+Y +I G + C A+E++ +M+S +
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 196 PNDLTLMNVISACSRFGEIWNCR---MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ T +V+S CS E++ CR +H I L + V + L+ Y V A
Sbjct: 110 ESASTFPSVLSVCS--DELF-CREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWG 299
+LFD+M +RNL CN++L + +TG E++ R+ + V G
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L CS +G Q+H + LGF N F++++L+ +YA C L
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA--------------CLRL 162
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
+D A +LFD M + +++ Q EV+ M
Sbjct: 163 -----------------VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME 205
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD-GLVLVSTNLMHAYCLCSGV 249
+ V N LT +I CS ++ + +H+L +K + + V+ L+ Y C +
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL 265
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ R F+ +PE+++++ N +++ + G V + +LF ++
Sbjct: 266 SGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
VSC+ +I Y K+GQ + + ++FD + T++I G +N + +++ ++M
Sbjct: 455 AVSCS-LIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDR 513
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMI-HALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+++P+++T+++V+S CS G + +I +L K +
Sbjct: 514 MNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS-------------------- 553
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA-RELFERIPDKDVISWGTMIDS 304
P R L C V L G + GLV+ A R L + D D ++W +++ S
Sbjct: 554 ---------PGRKLYACMVDLLG--RAGLVEKAERLLLQARGDADCVAWSSLLQS 597
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C+ + S +G+QIH KLG ++ F+QNSLINMY +C
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC------------------ 180
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
G+++ + +F+ + K S+++M+ + E L +F+ M S+
Sbjct: 181 -------------GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSE 227
Query: 193 SVVPNDLT-LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ + + + +++ + AC+ G + IH ++ + ++V T+L+ Y C + +
Sbjct: 228 TNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDK 287
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
A +F KM +RN +T + M++G + G + A +F ++
Sbjct: 288 ALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM 326
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 49 CIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLI 108
C+ +F N E +VSAL +C++ + + G IH L+ N +Q SL+
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 109 NMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----V 164
+MY KCG + A +FQ + ++ + MISG G+ ++A ++F M +G V
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 165 SYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
Y +++ + E VF +M+ + V
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKV 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%)
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
++ A +F + + TMI+G V F EAL + +MM P++ T ++ A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTC 267
C+R I + IH KL ++ V V +L++ Y C + + +F+K+ + +
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 268 NVMLNGYSKTGL 279
+ M++ + G+
Sbjct: 202 SSMVSARAGMGM 213
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 32/243 (13%)
Query: 53 FCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYA 112
F Q++ + ++ L++ + GR +H + G N ++ SL++MYA
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA 263
Query: 113 KCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKG 172
K G I + A ++F M K VS+ ++I G
Sbjct: 264 KVGFI-------------------------------EVASRVFSRMMFKTAVSWGSLISG 292
Query: 173 LVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL 232
QN +A E +M S P+ +TL+ V+ ACS+ G + R++H +K V
Sbjct: 293 FAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR 352
Query: 233 VLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
V +T LM Y C + +R +F+ + ++LV N M++ Y G LF ++ +
Sbjct: 353 V-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 293 KDV 295
++
Sbjct: 412 SNI 414
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
+K+C S +G + A+ G+ ++ F+ +S++N+Y KC
Sbjct: 122 TIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKC----------------- 164
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
G++D A LF M + + +TTM+ G Q +A+E +++M +
Sbjct: 165 --------------GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ + + ++ ++ A G+ R +H + + V+V T+L+ Y +
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
A R+F +M + V+ +++G+++ GL + A E
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 31/164 (18%)
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+ G++ A ++FD +P +G Y +MI + E L ++ M+++ + P+ T
Sbjct: 62 RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTM 121
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
I AC + GLVL + +C G +F
Sbjct: 122 TIKAC--------------------LSGLVLEKGEAV--WCKAVDFGYKNDVF------- 152
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYTQ 307
C+ +LN Y K G +D A LF ++ +DVI W TM+ + Q
Sbjct: 153 --VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQ 194
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L C+ S GR +H A+K GF + +QN++I+ YAK GS+ DA F + D
Sbjct: 315 LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+S Y ++I G V N E+ +F +M +
Sbjct: 375 IS-------------------------------YNSLITGCVVNCRPEESFRLFHEMRTS 403
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
+ P+ TL+ V++ACS + + H + + LM Y C + A
Sbjct: 404 GIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 253 RRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+R+FD M +R++V+ N ML G+ GL A LF + + V
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGV 506
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 32/216 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
LK+C+ + + G+ IHS F ++ ++ +L++ YAKC
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC------------------ 151
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS- 191
G+L+ A ++FD MP + V++ MI G + C + + +F DM
Sbjct: 152 -------------GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRI 198
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
D + PN T++ + A R G + + +H ++ ++V T ++ Y +
Sbjct: 199 DGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIY 258
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
ARR+FD ++N VT + M+ GY + ++ A E+F
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
P+ R+F R + L+ L +CS +++ G H + G+ NT I N
Sbjct: 390 PEESFRLFHEMRTSGIRPDIT-TLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN 448
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
+L++MY KC G+LD A ++FD M + VS
Sbjct: 449 ALMDMYTKC-------------------------------GKLDVAKRVFDTMHKRDIVS 477
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
+ TM+ G + EAL +F M V P+++TL+ ++SACS G
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSG 524
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 67/242 (27%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALK--LGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+S L++C + G+ IH LK L S+T + N L +YA C + AR +F
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 127 CP--VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
P ++P++ ++MI Y ND +AL+
Sbjct: 61 IPHPRINPIAWDLMIRAYA-------------------------------SNDFAEKALD 89
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
++ M++ V P T V+ AC+ ++ DG L+H++
Sbjct: 90 LYYKMLNSGVRPTKYTYPFVLKACA--------------GLRAIDDG------KLIHSHV 129
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
CS ++ C +++ Y+K G ++MA ++F+ +P +D+++W MI
Sbjct: 130 NCSDFAT-----------DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISG 178
Query: 305 YT 306
++
Sbjct: 179 FS 180
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 16/231 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQL 148
++ GF N ++ + K G + A L + LD V +I+I G K G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 149 DNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
DNA LF+ M KG + YTT+I+G + + ++ +DM+ + P+ + +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I + G++ +H I+ + + T+L+ +C + + +A + D M +
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
N+ T N+++NGY K L+D ELF ++ + D +++ T+I + +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 50 IRIFCNARQHQNPAEC-----------ELALVSALKSCSSISSP-SQGRQIHSLALKLGF 97
IR FC A + + A+ ++ SAL C + ++H ++ G
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 98 HSNTFIQNSLINMYAKCGSISDAR-----LLFQACPVLDPVSCNIMISGYVKAGQLDNAC 152
+T SLI+ + K + A ++ + C + + NI+I+GY KA +D+
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGL 407
Query: 153 QLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISAC 208
+LF M +G V+Y T+I+G + A E+F++M+S V P+ ++ ++
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 209 SRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NL 264
GE I K ++ + + ++H C S V +A LF +P + ++
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPD 292
T N+M+ G K G + A LF ++ +
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEE 555
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
+L + KS + S+ QG + H+LA+K G ++ F++ SL++MY KCG + AR
Sbjct: 216 SLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLAR------ 269
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
++FD + + V + MI GL N EAL +F+
Sbjct: 270 -------------------------RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFR 304
Query: 188 DMMSDS-VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCL 245
M+S+ + PN + L ++ + + +HA +K V + L+ YC
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMA 283
C + RR+F +RN ++ +++GY+ G D A
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQA 402
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L++C S G+Q+H G SN F++ L++MY CGS+ DA+ +F +
Sbjct: 118 LEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNV 177
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
S N ++ G V +G+ + + L F +M
Sbjct: 178 YSWNALLRGTVISGK-----------------------------KRYQDVLSTFTEMREL 208
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V N +L NV + + + HALAIK + V + T+L+ Y C VG A
Sbjct: 209 GVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLA 268
Query: 253 RRLFDKMPERNLVTCNVMLNG 273
RR+FD++ ER++V M+ G
Sbjct: 269 RRVFDEIVERDIVVWGAMIAG 289
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 36/240 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ + + L C+ + + QG++IH ALK F N + SL+ MY+KCG
Sbjct: 419 VTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG----------- 467
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
P + +LFD + + ++T MI V+N +EVF
Sbjct: 468 VP--------------------EYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF 507
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+ M+ P+ +T+ V++ CS + + +H +K + + VS ++ Y C
Sbjct: 508 RLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKC 567
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+ A FD + + +T ++ Y L A FE++ +S G +++T
Sbjct: 568 GDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQM-----VSRGFTPNTFT 622
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 32/207 (15%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALK-LGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L + L + + G+++H+ LK + F+ + LI++Y KCG ++ R +F
Sbjct: 319 LTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGS 378
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
+ +S+T ++ G N F +AL
Sbjct: 379 K-------------------------------QRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M + P+ +T+ V+ C+ I + IH A+K V + T+LM Y C
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGY 274
RLFD++ +RN+ M++ Y
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 31/140 (22%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L CS + + G+++H LK F S F+ +I MY KCG + A F A V
Sbjct: 526 LTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAV--- 582
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
KG +++T +I+ N+ F +A+ F+ M+S
Sbjct: 583 ----------------------------KGSLTWTAIIEAYGCNELFRDAINCFEQMVSR 614
Query: 193 SVVPNDLTLMNVISACSRFG 212
PN T V+S CS+ G
Sbjct: 615 GFTPNTFTFTAVLSICSQAG 634
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 57 RQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGS 116
R+ P+ ++V LK+CS+ + GRQIH+L K F S+ FI ++LI +YA GS
Sbjct: 351 RRGLEPSPSTFSVV--LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 117 ISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQN 176
D F + D S+T+MI VQN
Sbjct: 409 TEDGMQCFASTSKQD-------------------------------IASWTSMIDCHVQN 437
Query: 177 DCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
+ A ++F+ + S + P + T+ ++SAC+ F + + I AIK +D V
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVK 497
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
T+ + Y + A ++F ++ ++ T + M++ ++ G + A +FE + +
Sbjct: 498 TSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+ + +F AR+ N + AL C G +H L + G F+ N
Sbjct: 130 EQAMELFLEARE-ANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINV 188
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
LI+MY+KC G+LD A LFD + VS+
Sbjct: 189 LIDMYSKC-------------------------------GKLDQAMSLFDRCDERDQVSW 217
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACS---RFGEIWNCRMIHAL 223
++I G V+ E L + M D + L +V+ AC G I IH
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 224 AIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGY 274
KL ++ ++V T L+ Y + EA +LF MP +N+VT N M++G+
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 29/226 (12%)
Query: 68 ALVSALKSCS---SISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF 124
AL S LK+C + +G IH KLG + ++ +L++MYAK GS+ +A LF
Sbjct: 251 ALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLF 310
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
P + V+ N MISG++ Q+D + ++ EA +
Sbjct: 311 SLMPSKNVVTYNAMISGFL---QMDE-----------------------ITDEASSEAFK 344
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
+F DM + P+ T V+ ACS + R IHAL K + + L+ Y
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYA 404
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
L + + F ++++ + M++ + + ++ A +LF ++
Sbjct: 405 LMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%)
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
Y K +L A QLFD MP + +S+ ++I G Q + +A+E+F + ++ + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
+ C ++ ++H L + + V + L+ Y C + +A LFD+ E
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 262 RNLVTCNVMLNGYSKTGLVD 281
R+ V+ N +++GY + G +
Sbjct: 212 RDQVSWNSLISGYVRVGAAE 231
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 53/84 (63%)
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
+ ++ G + ++ H IK +++ + + NL++ YC C +G AR+LFD+MPERN
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 264 LVTCNVMLNGYSKTGLVDMARELF 287
+++ N +++GY++ G + A ELF
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELF 136
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 16/252 (6%)
Query: 59 HQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSIS 118
H P E ++L+ + +C+ ++ S G QI A+K G + T ++ S I+MYAK G++
Sbjct: 454 HIRPEEYTVSLM--MSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 119 DARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDC 178
A +F D + + MIS + G + A +F+ M G G++ C
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 179 FG----EALEVFKDMMSD-SVVPNDLTLMNVISACSRFGEIWNCR--MIHALAIKLAVDG 231
G + L+ F+ M +D + PN+ ++ R G + + ++ + V
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTW 631
Query: 232 LVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIP 291
L+S+ ++ + G A RL + PE + + ++ N Y+ +G+ A E+ E +
Sbjct: 632 RALLSSCRVYKDSVI-GKRVAERLMELEPEAS-GSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 292 DKDV-----ISW 298
D+ V +SW
Sbjct: 690 DRGVKKEPALSW 701
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 37/249 (14%)
Query: 49 CIRIFCNARQHQNPA-ECELA-LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
CI +F R+ QN E + A S + SCS I + G+ +H +K + NS
Sbjct: 417 CIELF---RKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNS 473
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
LI++Y K G ++ A +F + ++ N MI+ YV Q + A LFD
Sbjct: 474 LIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFD---------- 522
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
M+S++ P+ +TL+ ++ AC G + +MIH +
Sbjct: 523 ---------------------RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITE 561
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
+ + +S L+ Y C + ++R LFD +++ V NVM++GY G V+ A L
Sbjct: 562 TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIAL 621
Query: 287 FERIPDKDV 295
F+++ + DV
Sbjct: 622 FDQMEESDV 630
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 85 GRQIHSLALKLG-FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
G +H L LK G F NT + S + Y+KCG + DA L+F P D V+ +ISG+V
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHV 203
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+ G+ + M G SD PN TL
Sbjct: 204 QNGESEGGLGYLCKMHSAG----------------------------SDVDKPNPRTLEC 235
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
ACS G + R +H A+K + V +++ Y EA F ++ + +
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMI 302
+ + ++ +++G ++ + ++F + +K + G +I
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVI 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
++CS++ + +GR +H A+K G S+ F+Q+S+ + Y+K G+ S+A L F+ D
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
S +I+ ++G ++ E+ ++F +M +
Sbjct: 296 MFSWTSIIASLARSGDME-------------------------------ESFDMFWEMQN 324
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ P+ + + +I+ + + + H I+ V +L+ YC +
Sbjct: 325 KGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSV 384
Query: 252 ARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFERIPD 292
A +LF ++ E N N ML GY K ELF +I +
Sbjct: 385 AEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQN 426
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDAR----LLFQACPVLDPVSCNIMISGYVKAGQLDNA 151
G H + + + LIN K + + + + C LD CN ++S Y K L A
Sbjct: 326 GMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVA 385
Query: 152 CQLFDIMPGKGCV-SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSR 210
+LF + +G ++ TM+KG + C + +E+F+ + + + + + +VIS+CS
Sbjct: 386 EKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSH 445
Query: 211 FGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVM 270
G + + +H +K ++D + V +L+ Y + A R+F + + N++T N M
Sbjct: 446 IGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAM 504
Query: 271 LNGYSKTGLVDMARELFERIPDKD 294
+ Y + A LF+R+ ++
Sbjct: 505 IASYVHCEQSEKAIALFDRMVSEN 528
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
+IS Y G+ + + ++F ++ + + ++IK N + +L F M+ P+
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKL-AVDGLVLVSTNLMHAYCLCSGVGEARRLF 256
T V+SAC+ +H L +K D V + ++ Y C + +A +F
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 257 DKMPERNLVTCNVMLNGYSKTG 278
D+MP+R++V +++G+ + G
Sbjct: 185 DEMPDRDVVAWTAIISGHVQNG 206
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 91/167 (54%), Gaps = 7/167 (4%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D + C ++ Y K G L +A +LFD MP + S+ +I GLV + EA+E++K M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMI-HALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
++ + +++T++ + ACS G++ I H + + V+VS + Y C V
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFV 257
Query: 250 GEARRLFDKMP-ERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+A ++F++ ++++VT N M+ G++ G A E+F+++ D +
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGI 304
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 115/231 (49%), Gaps = 16/231 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQL 148
LKLG+ + SL+N + + +SDA L + D V+ N +I K ++
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 149 DNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
++A F + KG V+YT ++ GL + + +A + DM+ + PN +T +
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
+ A + G++ + + +++++D ++ ++L++ CL + EA ++FD M +
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS----WGTMIDSYTQ 307
++V+ N ++NG+ K V+ +LF + + ++S + T+I + Q
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-----QACPVLDPVSCNIM 138
+ +++ +++ + +SLIN I +A +F + C + D VS N +
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC-LADVVSYNTL 336
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCVS----YTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
I+G+ KA ++++ +LF M +G VS Y T+I+G Q +A E F M +
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P+ T ++ GE+ +I K +D ++ T ++ C V EA
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 255 LFDKMPERNL----VTCNVMLNGYSKTGLVDMARELFERIPDK 293
LF + + L VT M++G GL+ L+ ++ +
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 22/228 (9%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACPV--LDP--VSCNIMISGYVKAGQLDNA 151
G N + L++ + K G I +A + L P V N +IS + K ++ A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
++F MP KGC ++ ++I GL + D AL + +DM+S+ VV N +T +I+A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVL---VSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
R GEI R L ++ G L +L+ C V +AR LF+KM
Sbjct: 539 FLRRGEIKEAR---KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 265 ----VTCNVMLNGYSKTGLVDMA----RELFERIPDKDVISWGTMIDS 304
++CN+++NG ++G+V+ A +E+ R D++++ ++I+
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNA-CQL 154
GF + L+N K G + A+ LF P + V N +I G+V G+LD+A L
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 155 FDIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSR 210
D++ G V +Y ++I G + G ALEV DM + PN + ++ +
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 211 FGEIWNCRMIHALAIKLAVDGLV--LVSTN-LMHAYCLCSGVGEARRLFDKMPER----N 263
G+I + + +++ DGL V N L+ A+C + EA +F +MP + +
Sbjct: 437 LGKIDEA---YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+ T N +++G + + A L +D+IS G + ++ T
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLL-----RDMISEGVVANTVT 531
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 137 IMISGYVKAGQLDNACQLFDIMPGKGCVS----YTTMIKGLVQNDCFGEALEVFKDMMSD 192
+++ + ++D+A L M GCV Y T+I L + + EAL++ ++M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 193 SVVPNDLTLMNVISACSRFGEIWN-CRMIHALAIK-LAVDGLVLVSTNLMHAYCLCSGVG 250
VP+ T +VI +F I +M++ + I+ A D + LM+ C V
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY--GYLMNGLCKIGRVD 339
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMID 303
A+ LF ++P+ +V N +++G+ G +D A+ + + V S+G + D
Sbjct: 340 AAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM----VTSYGIVPD 388
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 105 NSLINMYAKCGSISDARLLFQAC----PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
NSLI + G + AR LF+ +SCNI+I+G ++G ++ A + M
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
+G V++ ++I GL + + L +F+ + ++ + P+ +T ++S + G +++
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 217 CRMIHALAIKLAVDGLV 233
++ I+ DG V
Sbjct: 688 ACLLLDEGIE---DGFV 701
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
+ AL +CS + GRQIH +K+G H+
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHN---------------------------- 305
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
DP C ++S Y K G + A +F + K + M+ +ND AL++F
Sbjct: 306 ---DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M SV+P+ TL NVIS CS G + +HA K + + + L+ Y C
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Query: 248 GVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
+A +F M E+++V +++G K G A ++F + D D
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 33/223 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L + + CS + + G+ +H+ K S + I+++L+ +Y+KCG DA L+F++
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
M K V++ ++I GL +N F EAL+VF
Sbjct: 434 -------------------------------MEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 187 KDMMSD--SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
DM D S+ P+ + +V +AC+ + +H IK + V V ++L+ Y
Sbjct: 463 GDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYS 522
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
C A ++F M N+V N M++ YS+ L +++ +LF
Sbjct: 523 KCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSAL-KSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
+ +++F + + + + + +++++ +C+ + + G Q+H +K G N F+ +
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGS 515
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVS 165
SLI++Y+KCG P + A ++F M + V+
Sbjct: 516 SLIDLYSKCG-----------LPEM--------------------ALKVFTSMSTENMVA 544
Query: 166 YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
+ +MI +N+ ++++F M+S + P+ +++ +V+ A S + + +H +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
+L + + L+ Y C A +F KM ++L+T N+M+ GY G A
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 286 LFERI 290
LF+ +
Sbjct: 665 LFDEM 669
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQN 105
P+ I +F N Q +++ S L + SS +S +G+ +H L+LG S+T ++N
Sbjct: 558 PELSIDLF-NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKN 616
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG--- 162
+LI+MY KCG A +F+ ++ N+MI GY G A LFD M G
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 163 -CVSYTTMIKGLVQNDCFGEALEVFKDMMSD-SVVPNDLTLMNVISACSRFGEIWNC-RM 219
V++ ++I + E +F+ M D + PN N++ R G +
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 220 IHALAIKLAVD-GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG 278
I A+ I+ L L+S + H + + G+ A +L PER T ++N Y + G
Sbjct: 737 IKAMPIEADSSIWLCLLSASRTH-HNVELGILSAEKLLRMEPERG-STYVQLINLYMEAG 794
Query: 279 LVDMARELFERIPDK 293
L + A +L + +K
Sbjct: 795 LKNEAAKLLGLMKEK 809
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LK+CS++++ S G+ IH + LG+ + FI SL+NMY KCG + A +F
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF------ 118
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D Q + + + +MI G + F E + F+ M+
Sbjct: 119 ------------------DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML 160
Query: 191 SDSVVPNDLTLMNVISACSRFGEI--WNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSG 248
V P+ +L V+S + G + IH ++ ++D + T L+ Y
Sbjct: 161 VFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGL 220
Query: 249 VGEARRLFDKMPER-NLVTCNVMLNGYSKTGLVDMARELF 287
+A R+F ++ ++ N+V NVM+ G+ +G+ + + +L+
Sbjct: 221 SIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCG-SISDARLLFQACPVLDPVSCNIMISGY 142
+G+QIH L+ +++F++ +LI+MY K G SI R+ + + V N+MI G+
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 143 VKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
+G +++ L+ L +N+ SV +
Sbjct: 248 GGSGICESSLDLY----------------MLAKNN---------------SVKLVSTSFT 276
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER 262
+ ACS+ R IH +K+ + V T+L+ Y C VGEA +F + ++
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK 336
Query: 263 NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
L N M+ Y++ A +LF + K V+ DS+T
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP-----DSFT 375
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 4/224 (1%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S LK+C + GR +H + S+ ++ N+LI+MY + ++ AR LF
Sbjct: 149 SVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER 208
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVF 186
D VS N +I+ Y G A +LFD M G +++ + G +Q + AL +
Sbjct: 209 DAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLI 268
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M + + + ++ + ACS G I + IH LAI + DG+ V L+ Y C
Sbjct: 269 SRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKC 328
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ A +F + E +L T N +++GY++ + A L +
Sbjct: 329 KDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM 372
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 71 SALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
S L +C + + G Q+H+ + G ++ + L+ Y+ ++A+ + + +L
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
P+ N++I+ Y K N+ F E + +K M+
Sbjct: 108 HPLPWNVLIASYAK-------------------------------NELFEEVIAAYKRMV 136
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
S + P+ T +V+ AC ++ R++H + + V L+ Y +G
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI----PDKDVISW 298
ARRLFD+M ER+ V+ N ++N Y+ G+ A ELF+++ + VI+W
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITW 248
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+A++ LK+CS I + G++IH LA+ + ++N+LI MY+KC + A ++F+
Sbjct: 281 VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ N +ISGY + + + A L
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHL-------------------------------L 369
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCL 245
++M+ PN +TL +++ C+R + + + H ++ ++ +L+ Y
Sbjct: 370 REMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAK 429
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ A+++ D M +R+ VT +++GY G +A LF+ +
Sbjct: 430 SGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM 474
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 51/272 (18%)
Query: 44 QDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFI 103
+D +H + +F RQ + + C S + + ++ + + L GF N+
Sbjct: 329 KDLRHALIVF---RQTEENSLCTWN--SIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 104 QNSLINMYAKCGSISDAR-----LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIM 158
S++ + A+ ++ + +L + C + N ++ Y K+G++ A Q+ D+M
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 159 PGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
+ V+YT++I G G AL +FK+M + P+ +T++ V+SACS + +
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACS------HSK 497
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP-ERNLVTC----NVMLNG 273
++H E RLF KM E + C + M++
Sbjct: 498 LVH-----------------------------EGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 274 YSKTGLVDMARELFERIPDK-DVISWGTMIDS 304
Y + G + A+++ +P K +W T++++
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLG-FHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
+V+ LK+C S G+QIH +K G F S+ +Q ++ +Y + + DAR
Sbjct: 123 IVACLKACFF----SVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDAR------ 172
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
++FD +P V + ++ G V+ E LEVFK
Sbjct: 173 -------------------------KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFK 207
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCLC 246
+M+ + P++ ++ ++AC++ G + + IH K ++ V V T L+ Y C
Sbjct: 208 EMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKC 267
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
+ A +F+K+ RN+ + ++ GY+ G A +RI +D I
Sbjct: 268 GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIK 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 33/211 (15%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGF-HSNTFIQNSLINMYAKCGSISDARLLF 124
E ++ +AL +C+ + + +QG+ IH K + S+ F+ +L++MYAKCG I A +F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ + S +I GY G A D +
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE------------------------- 312
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR-MIHALAIKLAVDGLVLVSTNLMHAY 243
D + P+ + L+ V++AC+ G + R M+ + + + + ++
Sbjct: 313 -----REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 244 CLCSGVGEARRLFDKMPERNLVTC-NVMLNG 273
C + +A L +KMP + L + +LNG
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 35/200 (17%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDP 132
L +CS +S P GRQ+H+L +K G + T + +LI+MY+K G + D+ +F++ D
Sbjct: 91 LGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDL 150
Query: 133 VSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
VS N ++SG+++ G+ GK EAL VF M +
Sbjct: 151 VSWNALLSGFLRNGK------------GK-------------------EALGVFAAMYRE 179
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V ++ TL +V+ C+ + + +HA+ + D LV++ T ++ Y + EA
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD-LVVLGTAMISFYSSVGLINEA 238
Query: 253 RRLFDKMPERNLVTCNVMLN 272
++++ + N+ T VMLN
Sbjct: 239 MKVYNSL---NVHTDEVMLN 255
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 32/250 (12%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP 128
L S+L CS S G+QIH +AL+ GF S++ + N L++MY KCG I AR +F+A P
Sbjct: 284 LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG------CVSYTTMIK-----GLVQ-- 175
VS MI Y G A ++F M +G V++ +I GLV+
Sbjct: 344 SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEG 403
Query: 176 NDCFGEALEVFKDMMSDSVVPND---LTLMNVISACSRFGEIWNCRMIHAL------AIK 226
+CFG E ++ +VP + ++++S EIW R++ + +I
Sbjct: 404 KECFGMMKEKYR------LVPGTEHYVCFIDILSKAGETEEIW--RLVERMMENDNQSIP 455
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
A+ VL + +L L G ARRL ++ N ++ N Y+ G D+ EL
Sbjct: 456 CAIWVAVLSACSLNMD--LTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEEL 513
Query: 287 FERIPDKDVI 296
++ +K ++
Sbjct: 514 RGKLKNKGLV 523
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 38/226 (16%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E L S +K+C+S+ QG+Q+H++ + G + ++I+ Y+ G I++A ++
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYN 243
Query: 126 ACPV-LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ V D V N +IS G ++N + EA
Sbjct: 244 SLNVHTDEVMLNSLIS-------------------------------GCIRNRNYKEAF- 271
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYC 244
++ PN L + ++ CS ++W + IH +A++ + LM Y
Sbjct: 272 ----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYG 327
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
C + +AR +F +P +++V+ M++ Y+ G A E+F +
Sbjct: 328 KCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREM 373
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG-EALEVFKDM 189
D V N I+ Y ++G A ++FD M K +S+ +++ GL Q FG EA+ +F+DM
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
M + V + ++ +VI+ C ++ R IH L IK + L+ V LM Y C +
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 250 GEARRLFDKMPERNLVTCNVMLN 272
+ +F +M ERN+V+ M++
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMIS 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 41/256 (16%)
Query: 45 DPQHCIRIFCNAR-QHQNPAECEL-ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF 102
+ + IF N R P E L++A+K I +G +IH L +K GF S
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIK---EGLKIHGLCIKTGFVSEPS 408
Query: 103 IQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
+ NS I +YAK F+A L++A + F+ + +
Sbjct: 409 VGNSFITLYAK----------FEA---------------------LEDAKKAFEDITFRE 437
Query: 163 CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGE---IWNCRM 219
+S+ MI G QN EAL++F ++++ PN+ T +V++A + F E + +
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIA-FAEDISVKQGQR 495
Query: 220 IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGL 279
HA +KL ++ +VS+ L+ Y + E+ ++F++M ++N +++ YS G
Sbjct: 496 CHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGD 555
Query: 280 VDMARELFERIPDKDV 295
+ LF ++ ++V
Sbjct: 556 FETVMNLFHKMIKENV 571
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 43/243 (17%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
++ S + +C + RQIH L +K G+ S + N L++ Y+KC
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC------------ 324
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
G L+ +F M + VS+TTMI D +A+ +F
Sbjct: 325 -------------------GVLEAVKSVFHQMSERNVVSWTTMISS--NKD---DAVSIF 360
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
+M D V PN++T + +I+A +I IH L IK V + + Y
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF-----ERIPDKDVISWGTM 301
+ +A++ F+ + R +++ N M++G+++ G A ++F E +P++ ++G++
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNE--YTFGSV 478
Query: 302 IDS 304
+++
Sbjct: 479 LNA 481
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 45/232 (19%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ L ALK+C +G QIH + GF S + N+++ MY K
Sbjct: 78 EVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRK------------ 123
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
AG+ DNA +F+ + VS+ T++ G N AL
Sbjct: 124 -------------------AGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNF 161
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
M S VV + T +S C + + +K ++ ++V + + Y
Sbjct: 162 VVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSR 221
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTG---------LVDMARELFE 288
ARR+FD+M +++++ N +L+G S+ G DM RE E
Sbjct: 222 SGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNS 106
+++F +A P E V + + S QG++ H+ LKLG +S + ++
Sbjct: 455 HEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSA 514
Query: 107 LINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSY 166
L++MYAK G +D + ++F+ M K +
Sbjct: 515 LLDMYAK-------------------------------RGNIDESEKVFNEMSQKNQFVW 543
Query: 167 TTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK 226
T++I + F + +F M+ ++V P+ +T ++V++AC+R G + I + I+
Sbjct: 544 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
Query: 227 LAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
+ + + H C+ +G A RL
Sbjct: 604 -----VYNLEPSHEHYSCMVDMLGRAGRL 627
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 37/231 (16%)
Query: 69 LVSALKSCSSISSPSQGRQIHSLALKLG-FHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
+V+ LK+C S G+QIH +K G F S++ +Q ++ +Y + + DAR
Sbjct: 123 IVACLKACFF----SVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDAR------ 172
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFK 187
++FD +P V + ++ G V+ E LEVF+
Sbjct: 173 -------------------------KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFR 207
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA-VDGLVLVSTNLMHAYCLC 246
+M+ + P++ ++ ++AC++ G + + IH K + ++ V V T L+ Y C
Sbjct: 208 EMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKC 267
Query: 247 SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS 297
+ A +F K+ RN+ + ++ GY+ G A ER+ +D I
Sbjct: 268 GCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIK 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 33/211 (15%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGF-HSNTFIQNSLINMYAKCGSISDARLLF 124
E ++ +AL +C+ + + +QG+ IH K + S+ F+ +L++MYAKCG I A +F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
+ + S +I GY G A C+ E LE
Sbjct: 278 KKLTRRNVFSWAALIGGYAAYGYAKKAMT---------CL----------------ERLE 312
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR-MIHALAIKLAVDGLVLVSTNLMHAY 243
D + P+ + L+ V++AC+ G + R M+ + + + + ++
Sbjct: 313 -----REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 244 CLCSGVGEARRLFDKMPERNLVTC-NVMLNG 273
C + +A L +KMP + L + +LNG
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLF----QACPVLDPVSCNIMISGYVKAGQLDNA 151
G + + N+LI+ Y + G + +A +++ Q D +CN + S + + + D A
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 152 CQ-LFDIMPGK---GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
Q LF +M G VSYT +I + EA +F +M S V PN +T +I A
Sbjct: 454 KQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP----ERN 263
+ G+I R + A +D T+L+H C+ V EA RLF +M ++N
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDK 293
VT VM++G SK G D A L++ + K
Sbjct: 574 SVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACPV--LDPVSCNI--MISGYVKAGQLDNA 151
G S+ + SLI+ + G++ A LLF L P S +I G K G++ A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
L + M KG V + T+I G + EA ++ D+M D+ N I++
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY-DVMEQKGFQADVFTCNTIAS 442
Query: 208 C----SRFGEI--WNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
C R+ E W RM+ +KL+ + TNL+ YC V EA+RLF +M
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEG-GVKLS----TVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 262 R----NLVTCNVMLNGYSKTGLVDMAREL 286
+ N +T NVM+ Y K G + AR+L
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKL 526
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGF--HSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
+ +CSSI + G +H L +K G+ ++ + NS+I+MY+KCG A +F+
Sbjct: 296 ISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
D +S N +++G+ G F EA + M
Sbjct: 356 DVISSNAILNGFAANGM-------------------------------FEEAFGILNQMQ 384
Query: 191 S-DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVL-VSTNLMHAYCLCSG 248
S D + P+ T++++ S C R +H +++ + L V +++ Y C
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+A LF R+LV+ N M++ +S+ G A+ LF+ +
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 60/291 (20%)
Query: 55 NARQHQNPAECELALVSALKS-CSSISSPSQGRQIHSLALKLGFHSNTF-IQNSLINMYA 112
N Q + + ++A V ++ S C +S +GR +H +++ S + NS+I+MY
Sbjct: 381 NQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 113 KCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLF-DIMPGKGCVSYT---- 167
KCG + A LLF+ D VS N MIS + + G A LF +++ C ++
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 168 -------------------------------------------------TMIKGLVQNDC 178
++I G +
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Query: 179 FGEALEVFKDMMSDSVVPNDL-TLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST 237
E+L F+ M + + +DL TL+ ISA G + R H LAIK + +
Sbjct: 561 HLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQN 620
Query: 238 NLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
L+ Y C + A ++F + + NL + N +++ S+ RE+F+
Sbjct: 621 TLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN---KAGREVFQ 668
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 122 LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGE 181
L + V D CN +++ Y K L +A +F M + VS+ T++ + N +
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNL 239
+L+ FK M + +T VISACS E+ +H L IK + + V V ++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
+ Y C A +F+++ R++++ N +LNG++ G+ + A + ++ D I
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 55/283 (19%)
Query: 22 LPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISS 81
+ +P L W I A S + + ++F N + N E+ V L + + + S
Sbjct: 642 ISDPNLCSW---NCVISALSQNKAGREVFQLFRNLKLEPN----EITFVGLLSASTQLGS 694
Query: 82 PSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
S G Q H ++ GF +N F+ +L++MY+ CG + +F+ V + N +IS
Sbjct: 695 TSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISA 754
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDS-VVPNDLT 200
+ G + +A+E+FK++ S+S + PN +
Sbjct: 755 HGFHGMGE-------------------------------KAMELFKELSSNSEMEPNKSS 783
Query: 201 LMNVISACSRFGEI-----WNCRMIHALAIKLAVDGLVLV------STNLMHAYCLCSGV 249
++++SACS G I + +M +K + V + + L AY +G+
Sbjct: 784 FISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGI 843
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
GE ++ + L CN +G +K G ++A LFE PD
Sbjct: 844 GEPQKA--GVWGALLSACN--YHGDTKLG-KEVAEVLFEMEPD 881
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
QGR H LA+K +T +QN+LI MY +C I
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDI-------------------------- 632
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
++A ++F ++ S+ +I L QN E ++F+++ + PN++T +
Sbjct: 633 -----ESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVG 684
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
++SA ++ G H I+ VS L+ Y C + ++F +
Sbjct: 685 LLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNS 744
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERI 290
+ N +++ + G+ + A ELF+ +
Sbjct: 745 ISAWNSVISAHGFHGMGEKAMELFKEL 771
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 126/310 (40%), Gaps = 87/310 (28%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKC---GSISDARL 122
E L S L SC G+Q+H LALKLG H + ++ N++I+MY +C + +A
Sbjct: 161 EFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT 216
Query: 123 LFQACPVLDPVSCNIMIS-----------------------GYVKAGQLDNACQLF---D 156
+F+A + V+ N MI+ G+ +A L+ L+ D
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSD 276
Query: 157 IMPGK---------------GCVSYTTMIKGLVQ---------NDCFG------------ 180
++P + G V+ T + L++ DC+
Sbjct: 277 LVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIV 336
Query: 181 ---------------EALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAI 225
A+ +F + + + P+ T +V+ AC+ + IHA I
Sbjct: 337 AWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVI 396
Query: 226 KLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARE 285
K +++ +L+HAY C + R+FD M R++V+ N ML YS G VD
Sbjct: 397 KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILP 456
Query: 286 LFERI---PD 292
+F+++ PD
Sbjct: 457 VFQKMDINPD 466
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
C + + N +I+ Y K G + A Q+FD MP + VS+T +I G VQ E +F
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF 150
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M+S PN+ TL +V+++C R+ + +H LA+KL + + V+ ++ Y C
Sbjct: 151 SSMLSH-CFPNEFTLSSVLTSC-RYEP---GKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 247 ---SGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ EA +F+ + +NLVT N M+ + L A +F R+ V
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV 257
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Query: 45 DPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQ 104
DP+ I +F RQ + + S LK+C+ + + IH+ +K GF ++T +
Sbjct: 349 DPERAIHLFGQLRQEKLSPDW-YTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN 407
Query: 105 NSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLF---DIMPGK 161
NSLI+ YAKCGS+ +F D VS N M+ Y GQ+D+ +F DI P
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDS 467
Query: 162 GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT----LMNVISACSRFGE 213
++ ++ E L +F+ M L +++++S RF E
Sbjct: 468 A--TFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAE 521
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%)
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
+D V N+++ Y+++G D+A ++FD M + V++ ++I L + E +F+ M
Sbjct: 269 VDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM 328
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ + + TL ++ ACSR + + IHA +K V + +LM Y C V
Sbjct: 329 QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEV 388
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+RR+FD M ++L + N+MLN Y+ G ++ LFE
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE 427
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
L + L +CS +++ G++IH+ LK + + NSL++MY KCG + +R +F
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEAL 183
D S NIM++ Y G ++ LF+ M G +++ ++ G L
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 184 EVFKDMMSD 192
+F+ M ++
Sbjct: 459 SLFERMKTE 467
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 147 QLDNACQLFDIMPGKGCVS---YTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
+LD A ++FD + ++ + M G +N +AL V+ DM+ + P + ++
Sbjct: 182 RLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISV 241
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
+ AC ++ R IHA +K +V L+ Y +AR++FD M ERN
Sbjct: 242 ALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERN 301
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDKDV-ISWGTM 301
+VT N +++ SK V LF ++ ++ + SW T+
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATL 340
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQA----CPVLDPVSCNIMISGYVKAGQLDNA 151
G +T NS+I+ + K G + D F+ C D ++ N +I+ + K G+L
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 152 CQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+ + M G G VSY+T++ + +A++ + DM +VPN+ T ++I A
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----N 263
+ G + + + +++ V+ V+ T L+ C + EA LF KM N
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMI 302
L + N +++G+ K +D A EL + + D++ +GT I
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDA-RL---LFQACPVLDPVSCNIMISGYVKAGQLD 149
++G N + SLI+ K G++SDA RL + Q + V+ +I G A ++
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 150 NACQLFDIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
A +LF M G + SY +I G V+ ALE+ ++ + P+ L I
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL- 264
+I +++ + + L+ T LM AY E L D+M E ++
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 265 ---VTCNVMLNGYSKTGLVDMARELFERIPD 292
VT V+++G K LV A + F RI +
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 71 SALKSCS-SISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV 129
S L++C+ S S G ++H +K G + I+ SL+ MY + G++SDA
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAE-------- 156
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
++FD MP + V+++T++ ++N +AL +FK M
Sbjct: 157 -----------------------KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM 193
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ D V P+ +T+++V+ C+ G + R +H + D + +L+ Y C +
Sbjct: 194 VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ R+F+K+ ++N V+ M++ Y++ + A F +
Sbjct: 254 LSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDM 189
LD CN +++ Y K G L ++ ++F+ + K VS+T MI + + +AL F +M
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 190 MSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVD-GLVLVSTNLMHAYCLCSG 248
+ + PN +TL +V+S+C G I + +H A++ +D +S L+ Y C
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 249 VGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ + + + +RN+V N +++ Y+ G+V A LF ++
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
L S++ +C + G+QIH ++ S+ F+QNSLI+MY+K
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSK------------- 451
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+G +D+A +F+ + + V++ +M+ G QN EA+ +F
Sbjct: 452 ------------------SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF 493
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL--VLVSTNLMHAYC 244
M + N++T + VI ACS G + + +H KL + GL + T L+ Y
Sbjct: 494 DYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH---KLIISGLKDLFTDTALIDMYA 550
Query: 245 LCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
C + A +F M R++V+ + M+N Y G + A F ++ +
Sbjct: 551 KCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSN-TFIQNSLINMYAKCGSISDARLLFQ 125
+ L S L SC I +G+ +H A++ N + +L+ +YA+CG +SD + +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
+ V+ N +IS Y G + +AL +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVI-------------------------------QALGL 392
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F+ M++ + P+ TL + ISAC G + + IH I+ V V +L+ Y
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD-EFVQNSLIDMYSK 451
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
V A +F+++ R++VT N ML G+S+ G A LF+
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFD 494
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 44/201 (21%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
E+ ++ +++CSSI S +G+ +H + G + F +LI+MYAKCG ++ A +F+
Sbjct: 505 EVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
A VS + MI+ Y G++ G A+
Sbjct: 564 AMSSRSIVSWSSMINAYGMHGRI-------------------------------GSAIST 592
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F M+ PN++ MNV+SAC G + + L VS N H C
Sbjct: 593 FNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG------VSPNSEHFACF 646
Query: 246 C-----SG-VGEARRLFDKMP 260
SG + EA R +MP
Sbjct: 647 IDLLSRSGDLKEAYRTIKEMP 667
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 120 ARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF 179
A LL DP+ +I Y G D++ +F+ P Y +IK V
Sbjct: 22 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLL 81
Query: 180 GEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR-MIHALAIKLAVDGLVLVSTN 238
A++++ ++S++ + +V+ AC+ E + +H IK VD ++ T+
Sbjct: 82 DAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETS 141
Query: 239 LMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
L+ Y + +A ++FD MP R+LV + +++ + G V A +F+ + D V
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIM 138
S ++ S L+ + N NSLI+ +AK G + +A LF +DP V+ N +
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
I+G+ +LD A Q+F +M K C V+Y T+I G + + +E+F+DM +
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
V N +T +I + + N +M+ + V ++ L+ C + +A
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 255 LFDKMP----ERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
+F+ + E ++ T N+M G K G V+ +LF + K DVI++ TMI +
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 117/230 (50%), Gaps = 18/230 (7%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDA-----RLLFQACPVLDPVSCNIMISGYVKAGQ 147
+++G+ +T +L++ + S+A R++ + C D V+ +I+G K G+
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP-DLVTYGAVINGLCKRGE 220
Query: 148 LDNACQLFDIM-PGK---GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
D A L + M GK V Y+T+I L + +AL +F +M + + P+ T +
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER- 262
+IS +G + + + ++ ++ V+ +L+ A+ + EA +LFD+M +R
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 263 ---NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
N+VT N ++NG+ +D A+++F + K DV+++ T+I+ +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLF-----QACPVLDPVSCNIMISGYVKAGQLDNACQL 154
N NSLIN + + +A+ +F + C + D V+ N +I+G+ KA ++ + +L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC-LPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 155 FDIMPGKG----CVSYTTMIKGLVQ-NDCFGEALEVFKDMMSDSVVPNDLTLMNVISACS 209
F M +G V+YTT+I G Q +DC A VFK M+SD V PN +T ++
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDC-DNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 210 RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLF----DKMPERNLV 265
+ G++ ++ K ++ + + C V + LF K + +++
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 266 TCNVMLNGYSKTGLVDMARELF----ERIPDKDVISWGTMIDSY 305
N M++G+ K GL + A LF E P D ++ T+I ++
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQLDNA 151
G H N N+L++ K G + A ++F+ ++P + NIM G KAG++++
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
LF + KG ++Y TMI G + EA +F M D +P+ T +I A
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 208 CSRFGE 213
R G+
Sbjct: 565 HLRDGD 570
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQL 148
++ G N ++N+ K G + A L + LD V +I+I G K G L
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
DNA LF+ M KG ++Y +I G + + ++ +DM+ + PN +T +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I + + G++ +H I + + T+L+ +C + + +A ++ D M +
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
N+ T N+++NGY K +D ELF ++ + D +++ T+I + +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDAR-----LLFQACPVLDP--VSCN 136
+ ++H + G +T SLI+ + K + A ++ + C DP + N
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC---DPNIRTFN 407
Query: 137 IMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
I+I+GY KA ++D+ +LF M +G V+Y T+I+G + A E+F++M+S
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEA 252
V PN +T ++ GE I K ++ + + ++H C S V +A
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 253 RRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPD 292
LF +P + + T N+M+ G K G + A LF ++ +
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 107 LINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNACQLF-DIMPGK 161
+I+ K GS+ +A LF + + ++ NI+I G+ AG+ D+ +L D++ K
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 162 ---GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
V+++ +I V+ EA E+ K+M+ + P+ +T ++I + +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV----TCNVMLNGY 274
+ L + D + L++ YC + + + LF KM R +V T N ++ G+
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 275 SKTGLVDMARELFERIPDK----DVISWGTMIDS 304
+ G +++A+ELF+ + + +++++ ++D
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 84 QGRQIHSLALKL--GFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISG 141
GR +H+ LK + + F+Q +L+ YA CG + +AR LF+ D + N +++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
Y + ++D+ E L +F M V PN+L+L
Sbjct: 191 YANSEEIDSD----------------------------EEVLLLFMRMQ---VRPNELSL 219
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
+ +I +C+ GE H +K + V T+L+ Y C + AR++FD+M +
Sbjct: 220 VALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ 279
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
R++ N M+ G + G EL+ K +IS G + DS T
Sbjct: 280 RDVSCYNAMIRGLAVHGFGQEGIELY-----KSLISQGLVPDSAT 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 108/268 (40%), Gaps = 46/268 (17%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
RSL + P L W + + + +F + N EL+LV+ +KS
Sbjct: 170 RSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN----ELSLVALIKS 225
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSC 135
C+++ +G H LK N F+ SLI++Y+KCG +S AR
Sbjct: 226 CANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR-------------- 271
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
++FD M + Y MI+GL + E +E++K ++S +V
Sbjct: 272 -----------------KVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV 314
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
P+ T + ISACS G + L I ++ + + + H CL +G + RL
Sbjct: 315 PDSATFVVTISACSHSGLV-----DEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRL 369
Query: 256 ------FDKMPERNLVTCNVMLNGYSKT 277
KMP + T G S+T
Sbjct: 370 EEAEECIKKMPVKPNATLWRSFLGSSQT 397
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 16/231 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQL 148
+KLGF + SL+N + + +A L + V + V N +I+G K L
Sbjct: 141 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 200
Query: 149 DNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
+NA ++F M KG V+Y T+I GL + + +A + +DM+ + PN + +
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I + G + R ++ I+ +V V +L++ +C+ +G+A+ +FD M +
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
++VT N ++ G+ K+ V+ +LF + + D ++ T+I Y Q
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 19/241 (7%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-----QACPVLDPVSCNIM 138
+ R ++ ++ N F NSLIN + G + DA+ +F + C D V+ N +
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC-FPDVVTYNTL 330
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
I+G+ K+ ++++ +LF M +G V +Y T+I G Q A +VF M+ V
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P+ +T ++ G+I ++ K +D ++ ++ C + EA
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 255 LFDKMPERNL----VTCNVMLNGYSKTGLVDMARELFERIPD-----KDVISWGTMIDSY 305
LF + + + + M++G + GL A +L R+ + + I T+ D Y
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Query: 306 T 306
T
Sbjct: 511 T 511
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 37/241 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+ SAL +C + +GR +H L + G N I N+L++MY K G +S++R +
Sbjct: 346 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
P D V+ N +I GY + D P K AL F
Sbjct: 406 MPRRDVVAWNALIGGYAE-----------DEDPDK--------------------ALAAF 434
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWN-CRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
+ M + V N +T+++V+SAC G++ + +HA + + V +L+ Y
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 494
Query: 246 CSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDSY 305
C + ++ LF+ + RN++T N ML + G + +L ++ S+G +D +
Sbjct: 495 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-----SFGVSLDQF 549
Query: 306 T 306
+
Sbjct: 550 S 550
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNAR-QHQNPAECELALVSALK 74
R + E+P+ ++ W +P+ I I+ R + E ++LV +
Sbjct: 97 RKVFEEMPDRNVVSWTSLMVGYSDKG---EPEEVIDIYKGMRGEGVGCNENSMSLV--IS 151
Query: 75 SCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
SC + S GRQI +K G S ++NSLI+M G++ A +F D +S
Sbjct: 152 SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 211
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
N + + Y + G ++ + ++F +M F D ++ +
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLM-------------------------RRFHDEVNSTT 246
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
V TL++V+ + W R IH L +K+ D +V V L+ Y EA
Sbjct: 247 VS---TLLSVLGHVDH--QKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 255 LFDKMPERNLVTCNVMLNGYSKTG 278
+F +MP ++L++ N ++ + G
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDG 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 158 MPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC 217
MP + VS+ TM+ G+V+ + E +E F+ M + P+ + ++++AC R G ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 218 RM-IHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSK 276
+ +H K + V VST ++H Y + V +R++F++MP+RN+V+ ++ GYS
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 277 TG 278
G
Sbjct: 121 KG 122
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 107/267 (40%), Gaps = 36/267 (13%)
Query: 16 RSLSLELPNPTLLRWVXXXXXIKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKS 75
R + L++P ++ W I + +DP + F R + + + +VS L +
Sbjct: 400 RRVLLQMPRRDVVAW---NALIGGYAEDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSA 455
Query: 76 CSSISSP-SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVS 134
C +G+ +H+ + GF S+ ++NSLI MYAKC
Sbjct: 456 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC-------------------- 495
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
G L ++ LF+ + + +++ M+ + E L++ M S V
Sbjct: 496 -----------GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 544
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
+ + +SA ++ + + +H LA+KL + + Y C +GE +
Sbjct: 545 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 604
Query: 255 LFDKMPERNLVTCNVMLNGYSKTGLVD 281
+ R+L + N++++ + G +
Sbjct: 605 MLPPSVNRSLPSWNILISALGRHGYFE 631
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 31/204 (15%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYV 143
+G Q+H K G S+ ++ +++++Y G +S +R
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR---------------------- 97
Query: 144 KAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMN 203
++F+ MP + VS+T+++ G E ++++K M + V N+ ++
Sbjct: 98 ---------KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 148
Query: 204 VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN 263
VIS+C + R I +K ++ + V +L+ V A +FD+M ER+
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208
Query: 264 LVTCNVMLNGYSKTGLVDMARELF 287
++ N + Y++ G ++ + +F
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIF 232
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 31/147 (21%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ 125
+ + L + + ++ +G+Q+H LA+KLGF ++FI N+ +MY+KCG I + +
Sbjct: 548 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP 607
Query: 126 ACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEV 185
S NI+IS + G + C
Sbjct: 608 PSVNRSLPSWNILISALGRHGYFEEVCA-------------------------------T 636
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFG 212
F +M+ + P +T +++++ACS G
Sbjct: 637 FHEMLEMGIKPGHVTFVSLLTACSHGG 663
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 41/239 (17%)
Query: 61 NPAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA 120
P + L L+ L++CS+ G IH L LKLGF S+ F+ ++L+ MY
Sbjct: 131 RPDDFTLPLI--LRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY--------- 179
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
V G+L +A +LFD MP + V YT M G VQ G
Sbjct: 180 ----------------------VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQ---G 214
Query: 181 EA---LEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL-AVDGLVLVS 236
EA L +F++M + + +++++ AC + G + + + +H I+ + GL L
Sbjct: 215 EAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNL-G 273
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDV 295
+ Y CS + A +F M R++++ + ++ GY G V M+ +LF+ + + +
Sbjct: 274 NAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI 332
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 138 MISGYVKAGQL-DNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV- 195
++ Y K L + +F MP + S+ +I ++ +++++F M +S V
Sbjct: 72 LVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVR 131
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
P+D TL ++ ACS E + +IH L +KL + VS+ L+ Y + AR+L
Sbjct: 132 PDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKL 191
Query: 256 FDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
FD MP R+ V M GY + G + +F +
Sbjct: 192 FDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREM 226
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 30/246 (12%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALK----LGFHSNTFIQNSLINMYAKCGSISDARL 122
+ +VS L +C + + G+ +H ++ LG + + N++ +MY KC + A
Sbjct: 236 VVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN----LGNAITDMYVKCSILDYAHT 291
Query: 123 LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDC 178
+F D +S + +I GY G + + +LFD M +G V++ ++
Sbjct: 292 VFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGL 351
Query: 179 FGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIK--LAVDGLVLV 235
++ F+ M ++VP +V SR G + + + + +K AV G VL
Sbjct: 352 VEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 236 STNLMHAYCLCSG---VGE--ARRLFDKMPERNLVTCNVMLNG-YSKTGLVDMARELFER 289
C G VGE AR L P + + V L G YS G D A L +
Sbjct: 412 G-------CKVYGNVEVGERVARELIQLKPRK--ASYYVTLAGLYSAAGRFDEAESLRQW 462
Query: 290 IPDKDV 295
+ +K +
Sbjct: 463 MKEKQI 468
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP--VLDP--VSCNIMISGYVKAGQL 148
L GF N ++ N L+N + K G+ISDA+ +F L P VS N +I+GY K G L
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 149 DNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
D +L M +Y+ +I L + + A +F +M ++PND+ +
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL 264
I SR GEI + + + + +++ L++ +C + AR + D M R L
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 265 ----VTCNVMLNGYSKTGLVDMAREL 286
+T +++G+ + G V+ A E+
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEI 437
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDARLLFQA--CPVLDP--VSCNIMISGYVKAGQLD 149
K G N I +LI+ +++ G I + +Q L P V N +++G+ K G L
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 150 NACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
A + D M +G ++YTT+I G + ALE+ K+M + + + + ++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER--- 262
+ G + + ++ + + T +M A+C +L +M
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 263 -NLVTCNVMLNGYSKTGLVDMARELFER------IPDKDVISWGTMIDSY 305
++VT NV+LNG K G + A L + +PD I++ T+++ +
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDD--ITYNTLLEGH 565
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 72 ALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD 131
ALKSC I S + +IH ++ GF + + SL+ Y+ GS+ A +F PV D
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
VS N+MI + G L N +AL ++K M +
Sbjct: 173 LVSWNVMICCFSHVG-LHN------------------------------QALSMYKRMGN 201
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ V + TL+ ++S+C+ + M+H +A + + V VS L+ Y C +
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 252 ARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
A +F+ M +R+++T N M+ GY G A F ++
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 65 CELA--LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAK--CGSISDA 120
CE A +V L+ C+S+ + R+IHS + G + I N L+ A GS+S A
Sbjct: 2 CEKARVIVRMLQGCNSMK---KLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHA 58
Query: 121 RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFG 180
+LLF FD P +Y +I+G +
Sbjct: 59 QLLFDH----------------------------FDSDPSTSDWNY--LIRGFSNSSSPL 88
Query: 181 EALEVFKDMMSDSVVPNDLTLMN-VISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNL 239
++ + M+ SV DL N + +C R I C IH I+ +V+T+L
Sbjct: 89 NSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSL 148
Query: 240 MHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWG 299
+ Y V A ++FD+MP R+LV+ NVM+ +S GL + A +++R+ ++ V
Sbjct: 149 VRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCG-- 206
Query: 300 TMIDSYT 306
DSYT
Sbjct: 207 ---DSYT 210
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 68 ALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC 127
LV+ L SC+ +S+ + G +H +A + S F+ N+LI+MYAKCGS+ +A +F
Sbjct: 210 TLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGM 269
Query: 128 PVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEAL 183
D ++ N MI GY G A F M G +++ ++ G E +
Sbjct: 270 RKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGV 329
Query: 184 EVFKDMMSD-SVVPNDLTLMNVISACSRFGEIWNC-RMIHA 222
E F+ M S + PN ++ R G++ N MI+A
Sbjct: 330 EHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA 370
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 80 SSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----DPVSC 135
S P + +KLGF + SL+N Y I DA LF + + V+
Sbjct: 132 SQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTY 191
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
+I K L++A +LF+ M G V+Y ++ GL + +G+A + +DMM
Sbjct: 192 TTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ PN +T +I A + G++ + ++ + I+++V V +L++ C+ + E
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 252 ARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDV----ISWGTMID 303
AR++F M N V +++G+ K+ V+ ++F + K V I++ +I
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 304 SY 305
Y
Sbjct: 372 GY 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-----QACPVLDPVSCNIM 138
+ ++++++ +++ + + F SLIN G + +AR +F C + V +
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC-YPNEVIYTTL 334
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF----GEALEVFKDMMSDSV 194
I G+ K+ ++++ ++F M KG V+ T L+Q C A EVF M S
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR- 253
P+ T ++ G++ MI K +D ++ T ++ C V +A
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 254 ---RLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
LF K + N++T M++G+ + GL+ A LF+++ +
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLF----QACPVLDPVSCNIMISGYVKAGQL 148
+K N +LI+ + K G + +A+ L+ Q D + +I+G G L
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
D A Q+F +M GC V YTT+I G ++ + +++F +M VV N +T
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY--- 366
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
T L+ YCL A+ +F++M R
Sbjct: 367 --------------------------------TVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFE----RIPDKDVISWGTMIDS 304
++ T NV+L+G G V+ A +FE R D +++++ +I
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 72/275 (26%)
Query: 42 LLQDPQHCI---------RIFCNARQHQNPAECEL-ALVSALKSCSSISSPSQGRQIHSL 91
L +HCI R F R E L + S L +C + G+Q+H+
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAH 108
Query: 92 ALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNA 151
+ G ++ + L+ Y+ + +A+ + + +L P+ N++I Y++
Sbjct: 109 CISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR------- 161
Query: 152 CQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF 211
N F E++ V+K MMS + ++ T +VI AC+
Sbjct: 162 ------------------------NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL 197
Query: 212 GEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVML 271
+ R++H G + VS++ NL CN ++
Sbjct: 198 LDFAYGRVVH---------GSIEVSSHRC----------------------NLYVCNALI 226
Query: 272 NGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+ Y + G VD+AR LF+R+ ++D +SW +I+ YT
Sbjct: 227 SMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 112/220 (50%), Gaps = 14/220 (6%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDARLLF 124
E S +K+C+++ + GR +H ++++ H N ++ N+LI+MY + G + AR LF
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHG-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFG 180
D VS N +I+ Y +L A +L D M G V++ T+ G ++ +
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACS-----RFGEIWNCRMIHALAIKLAVDGLVLV 235
AL M + +V + ++N + ACS ++G++++C +I + + +D V
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN---V 359
Query: 236 STNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
+L+ Y CS + A +F ++ +L T N +++G++
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF--IQNSLINMYAKCGSISDARLLF 124
+A+++ LK+CS I + G+ H L ++ S+ ++NSLI MY++C + A ++F
Sbjct: 321 VAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVF 380
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
Q V+A L ++ ++I G N+ E
Sbjct: 381 QQ----------------VEANSLS---------------TWNSIISGFAYNERSEETSF 409
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL-AVDGLVLVSTNLMHAY 243
+ K+M+ PN +TL +++ +R G + + + H ++ + +++ +L+ Y
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMY 469
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ A+R+FD M +R+ VT +++GY + G ++A F+
Sbjct: 470 AKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFK 514
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDA---------RLLFQACPVLDPVSCNIMISGYVKAG 146
GFH N S++ ++A+ G++ R ++ C +L N ++ Y K+G
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL----WNSLVDMYAKSG 473
Query: 147 QLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
++ A ++FD M + V+YT++I G + AL FKDM + P+ +T++ V+S
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 207 ACS-----RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP- 260
ACS R G +M H I+L ++ + ++ YC + +AR +F +P
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPY 589
Query: 261 ERNLVTCNVML-----NGYSKTGLVDMARELFERIPD 292
E + C +L +G + G + L E P+
Sbjct: 590 EPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE 626
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 72/275 (26%)
Query: 42 LLQDPQHCI---------RIFCNARQHQNPAECEL-ALVSALKSCSSISSPSQGRQIHSL 91
L +HCI R F R E L + S L +C + G+Q+H+
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAH 108
Query: 92 ALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNA 151
+ G ++ + L+ Y+ + +A+ + + +L P+ N++I Y++
Sbjct: 109 CISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR------- 161
Query: 152 CQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF 211
N F E++ V+K MMS + ++ T +VI AC+
Sbjct: 162 ------------------------NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL 197
Query: 212 GEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVML 271
+ R++H G + VS++ NL CN ++
Sbjct: 198 LDFAYGRVVH---------GSIEVSSHRC----------------------NLYVCNALI 226
Query: 272 NGYSKTGLVDMARELFERIPDKDVISWGTMIDSYT 306
+ Y + G VD+AR LF+R+ ++D +SW +I+ YT
Sbjct: 227 SMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 112/220 (50%), Gaps = 14/220 (6%)
Query: 66 ELALVSALKSCSSISSPSQGRQIHSLALKLGFHS-NTFIQNSLINMYAKCGSISDARLLF 124
E S +K+C+++ + GR +H ++++ H N ++ N+LI+MY + G + AR LF
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHG-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFG 180
D VS N +I+ Y +L A +L D M G V++ T+ G ++ +
Sbjct: 243 DRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 181 EALEVFKDMMSDSVVPNDLTLMNVISACS-----RFGEIWNCRMIHALAIKLAVDGLVLV 235
AL M + +V + ++N + ACS ++G++++C +I + + +D V
Sbjct: 303 GALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN---V 359
Query: 236 STNLMHAYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYS 275
+L+ Y CS + A +F ++ +L T N +++G++
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTF--IQNSLINMYAKCGSISDARLLF 124
+A+++ LK+CS I + G+ H L ++ S+ ++NSLI MY++C + A ++F
Sbjct: 321 VAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVF 380
Query: 125 QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALE 184
Q V+A L ++ ++I G N+ E
Sbjct: 381 QQ----------------VEANSLS---------------TWNSIISGFAYNERSEETSF 409
Query: 185 VFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKL-AVDGLVLVSTNLMHAY 243
+ K+M+ PN +TL +++ +R G + + + H ++ + +++ +L+ Y
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMY 469
Query: 244 CLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFE 288
+ A+R+FD M +R+ VT +++GY + G ++A F+
Sbjct: 470 AKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFK 514
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDA---------RLLFQACPVLDPVSCNIMISGYVKAG 146
GFH N S++ ++A+ G++ R ++ C +L N ++ Y K+G
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL----WNSLVDMYAKSG 473
Query: 147 QLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
++ A ++FD M + V+YT++I G + AL FKDM + P+ +T++ V+S
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 207 ACS-----RFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP- 260
ACS R G +M H I+L ++ + ++ YC + +AR +F +P
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIPY 589
Query: 261 ERNLVTCNVML-----NGYSKTGLVDMARELFERIPD 292
E + C +L +G + G + L E P+
Sbjct: 590 EPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE 626
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 16/231 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQL 148
++ GF N ++N+ K G + A L + LD V +I+I G K G L
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 149 DNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
DNA LF+ M KG ++Y T+I G + + ++ +DM+ + PN +T +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I + + G++ + ++ + + +L+ +C + + EA ++ D M +
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI----SWGTMIDSYTQ 307
+++T N+++NGY K +D ELF + + VI ++ T++ + Q
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 107 LINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNACQLF-DIMPGK 161
+I+ K GS+ +A LF + D ++ N +I G+ AG+ D+ +L D++ K
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 162 ---GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
V+++ +I V+ EA ++ K+MM + PN +T ++I + +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGY 274
+ L I D ++ L++ YC + + + LF +M R N VT N ++ G+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 275 SKTGLVDMARELFERIPDK----DVISWGTMIDS 304
++G +++A++LF+ + + D++S+ ++D
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA-----RLLFQACPVLDPVSCNIM 138
+ Q+ ++ G NT NSLI+ + K + +A ++ + C D ++ NI+
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP-DIMTFNIL 409
Query: 139 ISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
I+GY KA ++D+ +LF M +G V+Y T+++G Q+ A ++F++M+S V
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P+ ++ ++ GE+ I K ++ + + ++H C S V +A
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 255 LFDKMPERNLV----TCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
LF +P + + N+M++ + + A LF ++ ++ D +++ +I ++
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 87 QIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGY 142
Q+ L + G + N LIN Y K I D LF+ + + V+ N ++ G+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 143 VKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPND 198
++G+L+ A +LF M + VSY ++ GL N +ALE+F + + +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 199 LTLMNVISA---CSRFGEIWNCRMIHALAIKLAVDGLVL--VSTNLM-HAYCLCSGVGEA 252
M +I S+ + W+ L L + G+ L + N+M C + +A
Sbjct: 509 GIYMIIIHGMCNASKVDDAWD------LFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 253 RRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERI 290
LF KM E + +T N+++ + A EL E +
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 18/227 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDA-----RLLFQACPVLDPVSCNIMISGYVKAGQLDN 150
G+ NT N+LI+ S+A R++ + C D V+ ++++G K G D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP-DLVTYGVVVNGLCKRGDTDL 239
Query: 151 ACQLFDIMP-GK---GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
A L + M GK G + Y T+I GL + +AL +FK+M + + PN +T ++IS
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 207 ACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER---- 262
+G + + + I+ ++ V + L+ A+ + EA +L+D+M +R
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 263 NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
++VT + ++NG+ +D A+++FE + K DV+++ T+I +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 22/225 (9%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQLDNACQLF 155
+ F ++LI+ + K G + +A L+ +DP V+ + +I+G+ +LD A Q+F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 156 DIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF 211
+ M K C V+Y T+IKG + E +EVF++M +V N +T +I +
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 212 GEIWNCRMIHALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARRLFDKMP----ERNL 264
G+ C M + ++ DG+ ++ L+ C + +A +F+ + E +
Sbjct: 445 GD---CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
T N+M+ G K G V+ +LF + K DV+++ TMI +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMI 139
+ +++ +K + +SLIN + + +A+ +F+ D V+ N +I
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQ-NDCFGEALEVFKDMMSDSV 194
G+ K +++ ++F M +G V+Y +I+GL Q DC A E+FK+M+SD V
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEIFKEMVSDGV 462
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
PN +T ++ + G++ ++ + ++ + ++ C V +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 255 LFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPD 292
LF + + ++V N M++G+ + G + A LF+ + +
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDPV--SCNIMISGYVKAGQLDNA 151
G N N+L++ K G + A ++F+ ++P + NIMI G KAG++++
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
LF + KG V+Y TMI G + EA +FK+M D +PN +I A
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 208 CSRFGE 213
R G+
Sbjct: 581 RLRDGD 586
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 56/257 (21%)
Query: 103 IQNSLINMYAKCGSISDA------RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
+ NSL+N K + DA L FQ+C D + NI+I G G+ + A +L
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN--DTKTFNILIRGLCGVGKAEKALELLG 230
Query: 157 IMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSV------------------ 194
+M G GC V+Y T+I+G +++ +A E+FKD+ S SV
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 195 ------------------VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
P ++T ++ ++ GE+ I I V+
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPD 292
T+L+ YC V + RL+++M R N T ++++N + AREL ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 293 KDVIS----WGTMIDSY 305
KD+I + +ID +
Sbjct: 411 KDIIPQPFMYNPVIDGF 427
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 33/266 (12%)
Query: 50 IRIFCNARQHQNPAE----------CELALVSALKSCSSISSPSQGRQIHSL---ALKLG 96
I+ FC + + +E C +V+ S + R+ SL L+LG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLL------FQACPVLDPVSCNIMISGYVKAGQLDN 150
+ N L++ YAK G + A + F P D V+ +I GY + GQ+
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP--DVVTFTSLIDGYCRVGQVSQ 365
Query: 151 ACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
+L++ M +G +Y+ +I L + +A E+ + S ++P VI
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 207 ACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM------P 260
+ G++ +I K + T L+ +C+ + EA +F KM P
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 261 ERNLVTCNVMLNGYSKTGLVDMAREL 286
++ +T + +L+ K G+ A L
Sbjct: 486 DK--ITVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 56/257 (21%)
Query: 103 IQNSLINMYAKCGSISDA------RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
+ NSL+N K + DA L FQ+C D + NI+I G G+ + A +L
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN--DTKTFNILIRGLCGVGKAEKALELLG 230
Query: 157 IMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSV------------------ 194
+M G GC V+Y T+I+G +++ +A E+FKD+ S SV
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 195 ------------------VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVS 236
P ++T ++ ++ GE+ I I V+
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 237 TNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPD 292
T+L+ YC V + RL+++M R N T ++++N + AREL ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 293 KDVIS----WGTMIDSY 305
KD+I + +ID +
Sbjct: 411 KDIIPQPFMYNPVIDGF 427
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 33/266 (12%)
Query: 50 IRIFCNARQHQNPAE----------CELALVSALKSCSSISSPSQGRQIHSL---ALKLG 96
I+ FC + + +E C +V+ S + R+ SL L+LG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLL------FQACPVLDPVSCNIMISGYVKAGQLDN 150
+ N L++ YAK G + A + F P D V+ +I GY + GQ+
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP--DVVTFTSLIDGYCRVGQVSQ 365
Query: 151 ACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
+L++ M +G +Y+ +I L + +A E+ + S ++P VI
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 207 ACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM------P 260
+ G++ +I K + T L+ +C+ + EA +F KM P
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 261 ERNLVTCNVMLNGYSKTGLVDMAREL 286
++ +T + +L+ K G+ A L
Sbjct: 486 DK--ITVSSLLSCLLKAGMAKEAYHL 509
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLL---FQACPVL-DPVSCNIMISGYVKAGQLDNA 151
G N F + I+ Y + + A + C VL + V C +I+ Y K G++ A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 152 CQLFDIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
C + M +G + +YT ++ GL +ND +A E+F++M + P+ + +I+
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----N 263
S+ G + I ++ + V++ L+ +C + +A+ L D+M + N
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDS 304
VT +++GY K+G + A LF+ + K D + T++D
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 23/233 (9%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQLDNA 151
G + F LIN ++K G++ A +F L P + N+++ G+ ++G+++ A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 152 CQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+L D M KG V+Y T+I G ++ EA +F +M +VP+ ++
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR-----RL----FDK 258
C R ++ I K N + + G E + RL FD+
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASS--TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 259 MPERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD----VISWGTMIDSYTQ 307
+ N VT N+M++ K G ++ A+ELF ++ + + VI++ ++++ Y +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 47/226 (20%)
Query: 129 VLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALE 184
V+ P + ++ G +G LD A + M GC V YTT+IK +QN FG+A+
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 185 VFKDMMSDSVVPNDL---TLMNVISACSRFGE--------IWNCRMIHALAIKLAVDGLV 233
V K+M + P+ +L+ +S R E + N +A + G +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 234 LVS------------------------TNLMHAYCLCSGVGEARRLFDKMPERNLV---- 265
S T L++ YC V EA + M ++ ++
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 266 TCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
T V++NG K VD A E+F + K DV S+G +I+ +++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 22/276 (7%)
Query: 46 PQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKL---GFHSNTF 102
P + +F R+ CE A+ S ++ Q ++ SL G N
Sbjct: 94 PDQALDVFKRMRE---IFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQ 150
Query: 103 IQNSLINMYAKCGSISDAR----LLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIM 158
N LI M K AR +++ D S + +I+ KAG+LD+A +LFD M
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 159 PGKGCVS----YTTMIKGLVQNDCFGEALEVFKDMMSD-SVVPNDLTLMNVISACSRFGE 213
+G Y +I G ++ A+E++ ++ D SV PN T +IS S+ G
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Query: 214 IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNV 269
+ +C I + + + ++L+H C V +A +F+++ ER ++VT N
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 270 MLNGYSKTGLVDMARELFERIPDK---DVISWGTMI 302
ML G+ + G + + EL+ + K +++S+ +I
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILI 366
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNA 151
G H + + S+I+ K + +A L + L+ CN +I G ++ +L A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
M GC VSY +I GL + FGEA K+M+ + P+ T ++
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----N 263
R +I + ++ ++ V++ L+H C + +A + M R N
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 264 LVTCNVMLNGYSKTGLVDMAR----ELFERIPDKDVISWGTMI 302
LVT N ++ G+ K G + A +++ D+IS+ T++
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 115/239 (48%), Gaps = 16/239 (6%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIM 138
S ++ S ++ + N ++LI+ + K G + +A L+ +DP + + +
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
I+G+ +LD A +F++M K C V+Y+T+IKG + E +E+F++M +
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
V N +T +I + + N +M+ + + V +L L+ C + +A
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 255 LFDKMP----ERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
+F+ + E ++ T N+M+ G K G V+ ELF + K +VI++ TMI +
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVF 186
D V N +I G K +D+A LF M KG +Y+++I L + +A +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
DM+ + PN +T +I A + G++ ++ IK ++D + ++L++ +C+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 247 SGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISW 298
+ EA+ +F+ M + N+VT + ++ G+ K V+ ELF + + + +++
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 299 GTMIDSYTQ 307
T+I + Q
Sbjct: 437 TTLIHGFFQ 445
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 51/264 (19%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLF---------------------------- 124
+KLG+ + +SL+N Y ISDA L
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 125 -QACPVLDP----------VSCNIMISGYVKAGQLDNACQLFDIM-PGK---GCVSYTTM 169
+A ++D V+ +++G K G +D A L M GK V Y T+
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 170 IKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAV 229
I GL + +AL +F +M + + P+ T ++IS +G + + + I+ +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 230 DGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARE 285
+ V+ + L+ A+ + EA +L+D+M +R ++ T + ++NG+ +D A+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 286 LFERIPDKD----VISWGTMIDSY 305
+FE + KD V+++ T+I +
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGF 408
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQL 148
+ +G H N N L++ K G ++ A ++F+ ++P + NIMI G KAG++
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
++ +LF + KG ++Y TMI G + EA + K M D +PN T +
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 205 ISACSRFGE 213
I A R G+
Sbjct: 580 IRARLRDGD 588
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 16/231 (6%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQL 148
+KLG + +SL+N + SI DA + + D V I+I K +
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 149 DNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
A ++ M +G V+Y+++I GL ++ +A +M S + PN +T +
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSAL 124
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I A ++ G++ ++ + I++++D V ++L++ C+ + V EA ++ D M +
Sbjct: 125 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDKDV----ISWGTMIDSYTQ 307
N+VT + + NG+ K+ VD +L + +P + V +S T+I Y Q
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKC------GSISDARLLFQACPVLDPVSCN 136
S+ ++ + +++ N F +SLI Y C +I L+ + V+ +
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLI--YGLCMHNRVDEAIKMLDLMISKGCTPNVVTYS 192
Query: 137 IMISGYVKAGQLDNACQLFDIMPGKGCVSYT----TMIKGLVQNDCFGEALEVFKDMMSD 192
+ +G+ K+ ++D+ +L D MP +G + T T+IKG Q AL VF M S+
Sbjct: 193 TLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN 252
Query: 193 SVVPNDLTLMNVISACSRFGEIWNC--RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
++PN + V++ GE+ R H + +D ++ T ++H C V
Sbjct: 253 GLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD--IITYTIMIHGMCKACMVK 310
Query: 251 EARRLFDKMP----ERNLVTCNVMLNGYSKTGL 279
EA LF K+ E + +M+ ++ G+
Sbjct: 311 EAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGM 343
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPV-----LDPVSCNIMISGYVKAGQLDNACQL 154
+ F + ++N Y + G++ A + + L+ V+ N +I+GY G ++ ++
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 155 FDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSR 210
+M +G V+YT++IKG + EA VF+ + +V + ++ R
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 211 FGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV----T 266
G+I + +H I++ V + +L++ YC + EA ++F +M + +L T
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 267 CNVMLNGYSKTGLVDMARELFERIPDKDVI----SWGTMIDSYTQ 307
N +++GY + G VD A +L +++ K+V+ ++ ++ Y++
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 107 LINMYAKCGSISDA-RL---LFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
L++ Y + G I DA R+ + + + CN +I+GY K+GQL A Q+F M
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 163 CV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
+Y T++ G + EAL++ M VVP +T ++ SR G +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTC----NVMLNGY 274
+ + +K V+ + + L+ A EA +L++ + R L+T NVM++G
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 275 SKTGLVDMARELFERI 290
K V+ A+E+ + +
Sbjct: 517 CKMEKVNEAKEILDNV 532
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 15/188 (7%)
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCF-GE---ALEVFK 187
P ++++ Y + G + NA +FD M G + L+ N GE AL V+
Sbjct: 155 PTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYD 214
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIK--LAVDGLVLVSTNLMHAYCL 245
M+S V P+ T V++A R G + + M+ A + L ++ V+ +L++ Y +
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNV-DKAMVFAKETESSLGLELNVVTYNSLINGYAM 273
Query: 246 CSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVIS---- 297
V R+ M ER N+VT ++ GY K GL++ A +FE + +K +++
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 298 WGTMIDSY 305
+G ++D Y
Sbjct: 334 YGVLMDGY 341
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 136 NIMISGYVKAGQLDNACQLF-DIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMM 190
N+ I+G KAG+L++A +LF D++ + +YT +I G +A + +M
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
++PN +T +I + G + R++H L K + +T L+ V
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNT-LIDGLVKSGNV 841
Query: 250 GEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMAREL 286
EA RL +KM E+ LV G K G VD+ +E+
Sbjct: 842 AEAMRLKEKMIEKGLV------RGSDKQGDVDIPKEV 872
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
D+A LF M KG ++Y+++I L + +A + DM+ + PN +T +
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I A + G++ ++ IK ++D + ++L++ +C+ +GEA+++ + M +
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
N+VT N ++NG+ K VD ELF + + + +++ T+I + Q
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 105 NSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQLDNACQLFDIMPG 160
++LI+ + K G + A L++ +DP + + +I+G+ +L A Q+ ++M
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
K C V+Y T+I G + + +E+F++M +V N +T +I + + N
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP----ERNLVTCNVMLN 272
+M+ + + V +L L+ C + +A +F+ + E ++ T N+M+
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 273 GYSKTG 278
G K G
Sbjct: 507 GMCKAG 512
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDA-RLLFQACP-VLDP--VSCNIMISGYVKAGQLDNA 151
G N +SLI+ G SDA RLL ++P V+ + +I +VK G+L A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 152 CQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+L++ M + +Y+++I G D GEA ++ + M+ +PN +T +I+
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP----ERN 263
+ + + + + G + T L+H + A+ +F +M N
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIP----DKDVISWGTMIDS 304
++T N++L+G K G + A +FE + + D+ ++ MI+
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 23/239 (9%)
Query: 85 GRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-----QACPVLDPVSCNIMI 139
++++ +++ N F SLIN + G + +AR +F + C D V+ +I
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC-FPDVVAYTSLI 324
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
+G+ K ++D+A ++F M KG ++YTT+I+G Q A EVF M+S V
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 196 PNDLTLMNVISACSRF-GEIWNCRMIHALAIKLAVDGL---VLVSTNLMHAYCLCSGVGE 251
PN T NV+ C + G++ MI K +DG+ + L+H C + +
Sbjct: 385 PNIRTY-NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443
Query: 252 ARRLFDKMPERNL----VTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMI 302
A +F+ M +R + +T +++ G K G V A LF +P K +V+++ TMI
Sbjct: 444 ALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 17/248 (6%)
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----D 131
C S S P +KLGF + SLIN + + +A + + D
Sbjct: 118 CQS-SQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFK 187
V +I K G ++ A LFD M G V YT+++ GL + + +A + +
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M + P+ +T +I A + G+ + ++ I++++ + T+L++ +C+
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 248 GVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWG 299
V EAR++F M + ++V ++NG+ K VD A ++F + K + I++
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 300 TMIDSYTQ 307
T+I + Q
Sbjct: 357 TLIQGFGQ 364
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISG 141
+Q++ L+ N + N ++N Y K G++ +A LDP + +I G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 142 YVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
Y + LD+A ++F+ MP KGC V+YT +I GL EA+++F M D P
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 198 DLT---LMNVISACSRFGEIWN-CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
T L+ + R E N + + IK + T L+ + C +AR
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH----TYTVLIDSLCSQCKFEKAR 378
Query: 254 RLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
L +M E+ N++T N ++NGY K G+++ A ++ E + + + ++ +I Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 104/220 (47%), Gaps = 15/220 (6%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP---VLDPVSCNIMISGY 142
+++ +K H+ T + +SL ++C LL Q + + ++ N +I+GY
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLC---SQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 143 VKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPND 198
K G +++A + ++M + +Y +IKG +++ +A+ V M+ V+P+
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDV 462
Query: 199 LTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDK 258
+T ++I R G + + +L + T+++ + C V EA LFD
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 259 MPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
+ ++ N+V +++GY K G VD A + E++ K+
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 16/217 (7%)
Query: 105 NSLINMYAKCGSISDA----RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
NSLI+ + G+ A L+ V D + MI K+ +++ AC LFD +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
KG V YT +I G + EA + + M+S + +PN LT +I G++
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKM----PERNLVTCNVMLN 272
++ +K+ + V T L+H A F +M + + T +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 273 GYSKTGLV----DMARELFERIPDKDVISWGTMIDSY 305
Y + G + DM ++ E D+ ++ ++I Y
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 162 GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIH 221
GC Y T++ L + E +V+ +M+ D V PN T +++ + G +
Sbjct: 184 GC--YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 222 ALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP----ERNLVTCNVMLNGYSKT 277
+ ++ +D T+L+ YC + A ++F++MP RN V +++G
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 278 GLVDMARELFERIPDKD 294
+D A +LF ++ D +
Sbjct: 302 RRIDEAMDLFVKMKDDE 318
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 107 LINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
LI ++ GSISDA +F+ LD V+ N ++ GY K QL+ +L D M G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 163 ----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
+Y +I +V EA E+ +++ VP+ L +VI S+ G+
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL----VTCNVMLNGY 274
++ L + V+ + L+H YC + +A LF+K+ + L V N +++GY
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 275 SKTGLVDMAREL 286
G ++ A EL
Sbjct: 629 CSVGDIEKACEL 640
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 42/226 (18%)
Query: 79 ISSPSQG-RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNI 137
+ P + + IHS L+ N F+ +S ++ G + A +FQ
Sbjct: 354 VGKPEEAIKLIHSFRLR----PNIFVYSSFLSNICSTGDMLRASTIFQ------------ 397
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
++F++ CV YTTMI G +A + F ++ P+
Sbjct: 398 ---------------EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARR 254
T +I ACSRFG I + + + +GL V+ NLMH Y + +
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFR---NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 255 LFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
L D+M ++ T N++++ G +D A E+ + + +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 107 LINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
LI ++ GSISDA +F+ LD V+ N ++ GY K QL+ +L D M G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 163 ----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
+Y +I +V EA E+ +++ VP+ L +VI S+ G+
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL----VTCNVMLNGY 274
++ L + V+ + L+H YC + +A LF+K+ + L V N +++GY
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 275 SKTGLVDMAREL 286
G ++ A EL
Sbjct: 629 CSVGDIEKACEL 640
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 42/226 (18%)
Query: 79 ISSPSQG-RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNI 137
+ P + + IHS L+ N F+ +S ++ G + A +FQ
Sbjct: 354 VGKPEEAIKLIHSFRLR----PNIFVYSSFLSNICSTGDMLRASTIFQ------------ 397
Query: 138 MISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPN 197
++F++ CV YTTMI G +A + F ++ P+
Sbjct: 398 ---------------EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442
Query: 198 DLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARR 254
T +I ACSRFG I + + + +GL V+ NLMH Y + +
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFR---NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 255 LFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
L D+M ++ T N++++ G +D A E+ + + +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 22/286 (7%)
Query: 37 IKAPSLLQDPQHCIRIFCNARQHQNPA---ECELALVSALKSCSSISSPSQGRQIHSLAL 93
+K+ + + P FC +R+ + EC ++LV L + + R + S
Sbjct: 123 LKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVD---RIRFVSSEIK 179
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV--LDPV--SCNIMISGYVKAGQLD 149
K F N+LI + K G + + +++ ++P + N +++G V A +D
Sbjct: 180 KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVD 239
Query: 150 NACQLFDIMPG----KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
+A ++F++M V+Y TMIKG + +A+E +DM + + +T M +I
Sbjct: 240 SAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
Query: 206 SACSRFGEIWNCRMIH----ALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
AC + +C ++ I++ LV L L G + K +
Sbjct: 300 QACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSK 359
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMID 303
N+ V+++GY+K+G V+ A L R+ D+ DV+++ +++
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQLDNA 151
G N+ +SLI+ K G + +A LF+ D N +I + K ++D A
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 152 CQLFDIMPGK-GC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
LF M + GC +YT ++ G+ + EAL+++ M+ + P + +
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALST 546
Query: 207 ACSRFGEIWN-CRMIHALAIKLAVDGLVLVST--NLMHAYCLCSGVGEARRLFDKMPERN 263
G++ C+++ LA G++L + ++++ C + EA +L D + ER
Sbjct: 547 GLCLSGKVARACKILDELAPM----GVILDAACEDMINTLCKAGRIKEACKLADGITERG 602
Query: 264 LVTC----NVMLNGYSKTGLVDMAREL 286
VM+N K G D+A +L
Sbjct: 603 REVPGRIRTVMINALRKVGKADLAMKL 629
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 27/227 (11%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIM-----IS 140
R +H + + GF + + ++N K G + +A F C D ++ N M I
Sbjct: 383 RLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR-FDGLAINSMFYSSLID 440
Query: 141 GYVKAGQLDNACQLFDIMPGKGCVS----YTTMIKGLVQNDCFGEALEVFKDMMS----D 192
G KAG++D A +LF+ M KGC Y +I ++ EA+ +FK M D
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCD 500
Query: 193 SVVPNDLTLMNVISACSRFGE---IWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
V L++ + R E +W+ M+ I +ST L CL V
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWD--MMIDKGITPTAACFRALSTGL----CLSGKV 554
Query: 250 GEARRLFDKMPERNLV---TCNVMLNGYSKTGLVDMARELFERIPDK 293
A ++ D++ ++ C M+N K G + A +L + I ++
Sbjct: 555 ARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITER 601
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD----PVSCNIMI 139
+ +++ +K + F +SLIN + + +A+ +F+ D V+ N +I
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQ-NDCFGEALEVFKDMMSDSV 194
+G+ KA ++D +LF M +G V+YTT+I G Q DC A VFK M+SD V
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC-DNAQMVFKQMVSDGV 466
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
PN +T ++ + G++ ++ + ++ + ++ C V +
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 255 LF----DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
LF K + +++ N M++G+ + GL + A LF ++ +
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
D+A LF M KG ++Y+++I L + + +A + DM+ + PN +T +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER-- 262
I A + G++ ++ IK ++D + ++L++ +C+ + EA+ +F+ M +
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 263 --NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
N+VT N ++NG+ K +D ELF + + + +++ T+I + Q
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 51/264 (19%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLF---------------------------- 124
+KLG+ + +SL+N Y ISDA L
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 125 -QACPVLDP----------VSCNIMISGYVKAGQLDNACQLFDIMPG----KGCVSYTTM 169
+A ++D V+ ++++G K G +D A L + M V Y+T+
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 170 IKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAV 229
I L + +AL +F +M + V PN +T ++IS + + + + I+ +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 230 DGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARE 285
+ V+ L+ A+ + EA +L+D+M +R ++ T + ++NG+ +D A+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 286 LFERIPDKD----VISWGTMIDSY 305
+FE + KD V+++ T+I+ +
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGF 410
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDA-RLLFQACP-VLDP--VSCNIMISGYVKAGQLDNA 151
G N +SLI+ SDA RLL ++P V+ N +I +VK G+L A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 152 CQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+L+D M + +Y+++I G +D EA +F+ M+S PN +T +I+
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----N 263
+ I + + + G + T L+H + A+ +F +M N
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 264 LVTCNVMLNGYSKTGLVDMARELFE 288
++T N +L+G K G ++ A +FE
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFE 494
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 51/263 (19%)
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL--DP--VSCNIMISGYVKAGQLD 149
+LG N + N LIN + + IS A L L +P V+ + +++GY ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 150 NACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
+A L D M G +++TT+I GL ++ EA+ + M+ PN +T V+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 206 SACSRFGEI---WN------------------------CRMIHA-----LAIKLAVDGL- 232
+ + G+I +N C+ H L ++ G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 233 --VLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMAREL 286
V+ ++L+ C +A RL M ER N+VT N +++ + K G + A +L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 287 FE----RIPDKDVISWGTMIDSY 305
++ R D D+ ++ ++I+ +
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGF 375
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 16/238 (6%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD----PVSCNIMI 139
+ +++ +K + F +SLIN + + +A+ +F+ D V+ N +I
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
G+ KA ++D +LF M +G V+YTT+I G Q A VFK M+SD V+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
P+ +T ++ G++ ++ + ++ + ++ C V + L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 256 F----DKMPERNLVTCNVMLNGYSKTGLVDMA----RELFERIPDKDVISWGTMIDSY 305
F K + N+VT M++G+ + GL + A RE+ E P D ++ T+I ++
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 119/267 (44%), Gaps = 53/267 (19%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDA-----RLLFQACPVLDPVSCNIMISGYVKAGQ 147
+++G+ ++F N+LI+ + S+A R++ + C D V+ I+++G K G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP-DLVTYGIVVNGLCKRGD 236
Query: 148 LD-----------------------------------NACQLFDIMPGKG----CVSYTT 168
+D +A LF M KG V+Y +
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 169 MIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA 228
+I+ L + +A + DM+ + PN +T +I A + G++ ++ IK +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 229 VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMAR 284
+D + ++L++ +C+ + EA+ +F+ M + N+VT N ++ G+ K VD
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 285 ELFERIPDK----DVISWGTMIDSYTQ 307
ELF + + + +++ T+I + Q
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 53/265 (20%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDA-------------------------------- 120
+KLG+ + NSL+N + ISDA
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 121 --------RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP-GK---GCVSYTT 168
R++ + C D V+ I+++G K G +D A L M GK G V Y T
Sbjct: 203 SEAVALVDRMVVKGCQP-DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 169 MIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLA 228
+I L +AL +F +M + + PN +T ++I +G + + + I+
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 229 VDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMAR 284
++ V+ + L+ A+ + EA +L+D+M +R ++ T + ++NG+ +D A+
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 285 ELFERIPDKD----VISWGTMIDSY 305
+FE + KD V+++ T+I +
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGF 406
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%)
Query: 142 YVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
Y+K G+L +A LF+ M K V++ + VQ ALE F M +D+V + T+
Sbjct: 154 YMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTV 213
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
++++SAC + G + I+ A K +D ++V + + C AR LF++M +
Sbjct: 214 VSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ 273
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
RN+V+ + M+ GY+ G A LF + ++
Sbjct: 274 RNVVSWSTMIVGYAMNGDSREALTLFTTMQNE 305
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 77 SSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCN 136
+S S P Q ++IH++ L+ GF +NSL+
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSE----KNSLLTQ-------------------------- 48
Query: 137 IMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVP 196
++ V G + A Q+FD M + T+ KG V+N E+L ++K M V P
Sbjct: 49 -LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRP 107
Query: 197 NDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLF 256
++ T V+ A S+ G+ +HA +K L +V+T L+ Y + A LF
Sbjct: 108 DEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLF 167
Query: 257 DKMPERNLVTCNVMLNGYSKTGLVDMARELFERI 290
+ M ++LV N L +TG +A E F ++
Sbjct: 168 ESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 64/241 (26%)
Query: 67 LALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQA 126
+VS L +C + S G +I+ A K N ++N+ ++M+ KCG+ AR+LF+
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 127 CPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVF 186
+ VS + MI GY G EAL +F
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSR-------------------------------EALTLF 299
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
M ++ + PN +T + V+SACS G + + +L +V +N
Sbjct: 300 TTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL----------MVQSN-------- 341
Query: 247 SGVGEARRLFDK--MPERNLVTCNVMLNGYSKTGLVDMARELFERIP-DKDVISWGTMID 303
DK P + C V L G ++GL++ A E +++P + D WG ++
Sbjct: 342 ----------DKNLEPRKEHYACMVDLLG--RSGLLEEAYEFIKKMPVEPDTGIWGALLG 389
Query: 304 S 304
+
Sbjct: 390 A 390
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 88 IHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQ 147
+H+ LK+ S++++ +L+NMY++C I+ A +F + D V+C+ +I+GY + G
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGN 288
Query: 148 LDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
EAL +F ++ P+ + + V+ +
Sbjct: 289 -------------------------------HKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVTC 267
C+ + + + +H+ I+L ++ + V + L+ Y C + A LF +PE+N+V+
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 268 NVMLNGYSKTGLVDMARELFERIPDKDVI 296
N ++ G G A E F I + +I
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLI 406
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 39/209 (18%)
Query: 86 RQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKA 145
R IH +A+ G + ++++ Y+K G I +A LF + P D N+MI GY
Sbjct: 126 RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 146 GQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTL 201
G D LF++M +G C + + GL+ D +L
Sbjct: 186 GFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI-----------------------DPSL 222
Query: 202 MNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
+ V W+ +HA +K+ +D V L++ Y C + A +F+ + E
Sbjct: 223 LLV---------AWS---VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE 270
Query: 262 RNLVTCNVMLNGYSKTGLVDMARELFERI 290
+LV C+ ++ GYS+ G A LF +
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAEL 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
DP + Y L +A +LFD+ P + + ++I+ + F L +F ++
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
P++ T + S + R IH +AI + + + ++ AY +
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 251 EARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELF 287
EA +LF +P+ +L NVM+ GY G D LF
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF 195
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 32/176 (18%)
Query: 37 IKAPSLLQDPQHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQGRQIHSLALKLG 96
I S + + + +F R +C L + L SC+ +S G+++HS ++LG
Sbjct: 280 ITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI-VLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 97 FHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
+ + ++LI+MY+KCG + A LF
Sbjct: 339 LELDIKVCSALIDMYSKCGLLKCAMSLFAG------------------------------ 368
Query: 157 IMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
+P K VS+ ++I GL + A E F +++ ++P+++T ++ C G
Sbjct: 369 -IPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSG 423
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 105 NSLINMYAKCGSISDARLLFQA--CPVLDP--VSCNIMISGYVKAGQLDNACQLFDIMPG 160
++I+ + + G + +A LF C L+P V+ +I+GY KAG + +A ++ + M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
GC V+YTT+I GL + A E+ +M + PN T ++++ + G I
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL----VTCNVMLN 272
+ ++ + T LM AYC + +A+ + +M + L VT NV++N
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 273 GYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
G+ G+++ +L + K + T +S
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 13/243 (5%)
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLL---FQACPV-LD 131
C S +H + K+G N F NS++N K G+I +A L F+A + D
Sbjct: 467 CKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFK 187
V+ ++ Y K+G++D A ++ M GKG V++ ++ G + + ++
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M++ + PN T +++ + I+ V NL+ +C
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 248 GVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMID 303
+ EA LF +M + ++ T +V++ G+ K ARE+F+++ + + + + D
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 304 SYT 306
++
Sbjct: 706 FFS 708
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 51/235 (21%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
N +I+ + G I +A L + D +S + +++GY + G+LD +L ++M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 161 KG---------------------------------------CVSYTTMIKGLVQNDCFGE 181
KG V YTT+I G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIK-LAVDGLVLVSTNL 239
A + F +M S + P+ LT +IS + G++ ++ H + K L D + T L
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--TEL 427
Query: 240 MHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERI 290
++ YC + +A R+ + M + N+VT +++G K G +D A EL +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 105 NSLINMYAKCGSISDARLLFQA--CPVLDP--VSCNIMISGYVKAGQLDNACQLFDIMPG 160
++I+ + + G + +A LF C L+P V+ +I+GY KAG + +A ++ + M
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
GC V+YTT+I GL + A E+ +M + PN T ++++ + G I
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL----VTCNVMLN 272
+ ++ + T LM AYC + +A+ + +M + L VT NV++N
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 273 GYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
G+ G+++ +L + K + T +S
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 13/243 (5%)
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLL---FQACPV-LD 131
C S +H + K+G N F NS++N K G+I +A L F+A + D
Sbjct: 467 CKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFK 187
V+ ++ Y K+G++D A ++ M GKG V++ ++ G + + ++
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCS 247
M++ + PN T +++ + I+ V NL+ +C
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 248 GVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTMID 303
+ EA LF +M + ++ T +V++ G+ K ARE+F+++ + + + + D
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 304 SYT 306
++
Sbjct: 706 FFS 708
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 51/235 (21%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
N +I+ + G I +A L + D +S + +++GY + G+LD +L ++M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 161 KG---------------------------------------CVSYTTMIKGLVQNDCFGE 181
KG V YTT+I G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIK-LAVDGLVLVSTNL 239
A + F +M S + P+ LT +IS + G++ ++ H + K L D + T L
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--TEL 427
Query: 240 MHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERI 290
++ YC + +A R+ + M + N+VT +++G K G +D A EL +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 20/240 (8%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC------PVLDPVSCNI 137
+ ++H +K + F NSLIN + + A+ +F+ P LD + N
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD--TYNT 330
Query: 138 MISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDS 193
+I G+ K+ ++++ +LF M +G V+YTT+I+GL + A +VFK M+SD
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 194 VVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEAR 253
V P+ +T ++ G++ + K + + + T ++ C V +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 254 RLF----DKMPERNLVTCNVMLNGYSKTGLVDMARELFERI----PDKDVISWGTMIDSY 305
LF K + N+VT N M++G L+ A L +++ P D ++ T+I ++
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVF 186
D V N +I K +D+A LF M KG V+Y+++I L + +A ++
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
DM+ + PN +T +I A + G+ +H IK ++D + +L++ +C+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 247 SGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISW 298
+ +A+++F+ M + +L T N ++ G+ K+ V+ ELF + + D +++
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 299 GTMI 302
T+I
Sbjct: 364 TTLI 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 51/264 (19%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLF---------------------------- 124
+KLG+ + +SL+N Y ISDA L
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 125 -QACPVLDP----------VSCNIMISGYVKAGQLDNACQLFDIMPG----KGCVSYTTM 169
+A ++D V+ ++++G K G +D A L + M V + T+
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 170 IKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAV 229
I L + +AL +FK+M + + PN +T ++IS +G + + + I+ +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 230 DGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARE 285
+ ++ L+ A+ EA +L D M +R ++ T N ++NG+ +D A++
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 286 LFERIPDKDVI----SWGTMIDSY 305
+FE + KD ++ T+I +
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGF 335
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 106 SLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQLDNACQLFDIMPGK 161
+LI+++ K G++ +A+ L++ +DP V+ N +I+G G+L +A + FD+M K
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 162 GC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC 217
GC V+Y T+I G + E +++F+ M + + T +I + G++
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 218 RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERN----LVTCNVMLNG 273
I + V ++ L+H C+ + A FD M E +V N+M++G
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 274 YSKTGLVDMARELFERIPDKDV 295
K V+ A ELF R+P + V
Sbjct: 431 LCKADKVEKAWELFCRLPVEGV 452
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 91 LALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAG 146
L +K G+ N + N+LI+ K G ++ A L D V+ N +++G +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 147 QLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLM 202
+ +A ++ M + V++T +I V+ EA E++K+M+ SV PN++T
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 203 NVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP-- 260
++I+ G +++ + L V+ L+ +C V E +LF +M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 261 --ERNLVTCNVMLNGYSKTGLVDMARELF 287
++ T N +++GY + G + +A ++F
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 16/227 (7%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-----QACPVLDPVSCNIM 138
+ ++++ ++ N NS+IN G + DA+ F + C + V+ N +
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC-FPNVVTYNTL 322
Query: 139 ISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
ISG+ K +D +LF M +G +Y T+I G Q AL++F M+S V
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLM-HAYCLCSGVGEAR 253
P+ +T ++ GEI + ++ ++ + + +V+ N+M H C V +A
Sbjct: 383 TPDIITHCILLHGLCVNGEIESA-LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 254 RLFDKMPERNLV----TCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
LF ++P + T +M+ G K G A EL R+ ++ +I
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
+T NS+I + K DA+ +F D V+ N +I Y +A ++D QL +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 160 GKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIW 215
+G V +Y T+I G + D A ++F++M+S V P+ +T N++ +G
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC-NIL----LYGFCE 514
Query: 216 NCRMIHAL----AIKLAVDGLVLVSTN-LMHAYCLCSGVGEARRLFDKMP----ERNLVT 266
N ++ AL I+++ L V+ N ++H C S V EA LF +P E ++ T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 267 CNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMI 302
NVM++G+ + A LF ++ D D ++ T+I
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----DPVSCNIM 138
S + + S L+ G N F N +I+ + G SDA+ L + D ++ N +
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 139 ISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
IS VK G+L A +L D M + V+Y +MI G +++ F +A +F M S V
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV 432
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST---NLMHAYCLCSGVGE 251
V + T+++V R E L +++ GLV +T L+H +C +
Sbjct: 433 VTFN-TIIDVYCRAKRVDEGMQ------LLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 252 ARRLFDKMPERNL----VTCNVMLNGYSKTGLVDMARELFERIP----DKDVISWGTMI 302
A+ LF +M + +TCN++L G+ + ++ A ELFE I D D +++ +I
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 105 NSLINMYAKCGSISDARLL----FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
N+LI+ K G + +A L C D V+ N MI G+ K + D+A +FD+M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 161 KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMI 220
V++ T+I + E +++ +++ +V N T +I F E+ N
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG---FCEVDNLNAA 486
Query: 221 HALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARRLFD--KMPERNL--VTCNVMLNG 273
L ++ G+ + L++ +C + EA LF+ +M + +L V N++++G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 274 YSKTGLVDMARELFERIP----DKDVISWGTMIDSY 305
K VD A +LF +P + DV ++ MI +
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEV 185
+D V+ +++G K G +A L M V Y+ +I L ++ +A +
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F +M+ + PN T +I FG + + + I+ ++ VL L+ A
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 246 CSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTM 301
+ EA +L D+M R + VT N M+ G+ K D A+ +F+ + DV+++ T+
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 302 IDSY 305
ID Y
Sbjct: 439 IDVY 442
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 21/245 (8%)
Query: 84 QGRQIHSLAL-----KLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD----PVS 134
+GR +L L + GF + ++N K G+ + A LF+ + V
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 135 CNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMM 190
+I+I K G D+A LF+ M KG V+Y+++I GL + + + ++ ++M+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVG 250
+++P+ +T +I + G++ + ++ I + + +L+ +C + +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 251 EARRLFDKMP----ERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMI 302
EA ++FD M E ++VT ++++N Y K VD LF I K + I++ T++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 303 DSYTQ 307
+ Q
Sbjct: 428 LGFCQ 432
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 105 NSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
++LI+++ K G + +A+ L+ D ++ N +I G+ K L A Q+FD+M
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
KGC V+Y+ +I + + + +F+++ S ++PN +T ++ + G++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV----TCNVMLN 272
+ + + V V+ L+ C + +A +F+KM + + N++++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 273 GYSKTGLVDMARELFERIPDK----DVISWGTMI 302
G VD A LF + DK DV+++ MI
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 107 LINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
+I+ K GS DA LF + D V+ + +I G G+ D+ ++ M G+
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 163 ----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCR 218
V+++ +I V+ EA E++ +M++ + P+ +T ++I + +
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 219 MIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGY 274
+ L + + ++ + L+++YC V + RLF ++ + N +T N ++ G+
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 275 SKTGLVDMARELFERIPDK----DVISWGTMIDS 304
++G ++ A+ELF+ + + V+++G ++D
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMI 139
+ Q+ L + G + + LIN Y K + D LF+ + + ++ N ++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
G+ ++G+L+ A +LF M +G V+Y ++ GL N +ALE+F+ M
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ----- 482
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
RM + I ++H C S V +A L
Sbjct: 483 --------------------KSRMTLGIGI----------YNIIIHGMCNASKVDDAWSL 512
Query: 256 F----DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
F DK + ++VT NVM+ G K G + A LF ++ +
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP 159
+T NS+I + K DA+ +F D V+ N +I Y +A ++D QL +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 160 GKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIW 215
+G V +Y T+I G + D A ++F++M+S V P+ +T N++ +G
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC-NIL----LYGFCE 514
Query: 216 NCRMIHAL----AIKLAVDGLVLVSTN-LMHAYCLCSGVGEARRLFDKMP----ERNLVT 266
N ++ AL I+++ L V+ N ++H C S V EA LF +P E ++ T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 267 CNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMI 302
NVM++G+ + A LF ++ D D ++ T+I
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 30/241 (12%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF------QACPVLDPVSCN 136
S + + S L+ G N F N +I+ + G SDA+ L + P D ++ N
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP--DVLTFN 370
Query: 137 IMISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSD 192
+IS VK G+L A +L D M + V+Y +MI G +++ F +A +F M S
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 193 SVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST---NLMHAYCLCSGV 249
VV + T+++V R E L +++ GLV +T L+H +C +
Sbjct: 431 DVVTFN-TIIDVYCRAKRVDEGMQ------LLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 250 GEARRLFDKMPERNL----VTCNVMLNGYSKTGLVDMARELFERIP----DKDVISWGTM 301
A+ LF +M + +TCN++L G+ + ++ A ELFE I D D +++ +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 302 I 302
I
Sbjct: 544 I 544
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 105 NSLINMYAKCGSISDARLL----FQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPG 160
N+LI+ K G + +A L C D V+ N MI G+ K + D+A +FD+M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 161 KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMI 220
V++ T+I + E +++ +++ +V N T +I F E+ N
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG---FCEVDNLNAA 486
Query: 221 HALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARRLFD--KMPERNL--VTCNVMLNG 273
L ++ G+ + L++ +C + EA LF+ +M + +L V N++++G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 274 YSKTGLVDMARELFERIP----DKDVISWGTMIDSY 305
K VD A +LF +P + DV ++ MI +
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 130 LDPVSCNIMISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEV 185
+D V+ +++G K G +A L M V Y+ +I L ++ +A +
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 186 FKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCL 245
F +M+ + PN T +I FG + + + I+ ++ VL L+ A
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 246 CSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVISWGTM 301
+ EA +L D+M R + VT N M+ G+ K D A+ +F+ + DV+++ T+
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 302 IDSY 305
ID Y
Sbjct: 439 IDVY 442
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQLDNA 151
G + NSL+ + ++ G AR LF D S N ++ K GQ+D A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 152 CQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
++ MP K VSY+T+I G + F EAL +F +M + + ++ ++S
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----N 263
++ G I + + V+ L+ Y E +++F +M N
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPD----KDVISWGTMIDS 304
L+T + +++GYSK GL A E+F DV+ + +ID+
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQLDNACQLF 155
N +++I+ +AK G +A LF LD VS N ++S Y K G+ + A +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 156 DIMPG----KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRF 211
M K V+Y ++ G + + E +VF +M + V+PN LT +I S+
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 212 GEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTC 267
G I + V++ + L+ A C VG A L D+M + N+VT
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 268 NVMLNGYSKTGLVD 281
N +++ + ++ +D
Sbjct: 588 NSIIDAFGRSATMD 601
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 135 CNIMISGYVKAGQLDNACQLFDIM----PGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
+ MIS + G++ A ++F+ G +++ +I ++ EA+ VF M
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLV--LVSTNLMHAYCLCSG 248
+ PN +T VI AC + G + + ++ +G+ ++ N + A C G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGG--MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 249 VGE-ARRLFDKMP----ERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWG 299
+ E AR LFD+M E+++ + N +L+ K G +D+A E+ ++P K +V+S+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 300 TMIDSYTQ 307
T+ID + +
Sbjct: 414 TVIDGFAK 421
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 44/195 (22%)
Query: 106 SLINMYAKCGSISDA----RLLFQACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMP-G 160
+LI + + G A +L + V D ++ N+MISGY KAG+++NA + D M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS 201
Query: 161 KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMI 220
V+Y T+++ L + +A+EV M+ P+
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD----------------------- 238
Query: 221 HALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSK 276
V+ T L+ A C SGVG A +L D+M +R ++VT NV++NG K
Sbjct: 239 ------------VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 277 TGLVDMARELFERIP 291
G +D A + +P
Sbjct: 287 EGRLDEAIKFLNDMP 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 116 SISDARLLFQACPVLDP----------VSCNIMISGYVKAGQLDNACQLFDIMPGKGC-- 163
S+ D+ L QA VLD ++ I+I + + +A +L D M +GC
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 164 --VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIH 221
V+Y ++ G+ + EA++ DM S PN +T ++ + G + +
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 222 ALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKT 277
A ++ V+ L++ C +G A + +KMP+ N ++ N +L+G+ K
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 278 GLVDMARELFERIPDK----DVISWGTMI 302
+D A E ER+ + D++++ TM+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDA-----RLLFQACPVLDPVSCNIMISGYVKAGQLDN 150
G N+ N L++ + K + A R++ + C D V+ N M++ K G++++
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC-YPDIVTYNTMLTALCKDGKVED 432
Query: 151 ACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
A ++ + + KGC ++Y T+I GL + G+A+++ +M + + P+ +T +++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 207 ACSRFGEIWNC-RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER--- 262
SR G++ + H ++ + + ++M C A M R
Sbjct: 493 GLSREGKVDEAIKFFHEFE-RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 263 -NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI 296
N + +++ G + G+ A EL + +K ++
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQLDNA 151
G + + NSLIN + K G IS A L+P V+ ++ GY G+++ A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 152 CQLFDIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+L+ M GKG ++TT++ GL + +A+++F +M +V PN +T +I
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTN---LMHAYCLCSGVGEARRLFDKMP---- 260
G++ ++ G+V + + L+H CL EA+ D +
Sbjct: 552 YCEEGDMSKA---FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 261 ERNLVTCNVMLNGYSKTGLVDMA----RELFERIPDKDVISWGTMIDS 304
E N + +L+G+ + G ++ A +E+ +R D D++ +G +ID
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 18/250 (7%)
Query: 61 NPAECELA-LVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISD 119
+P+E ++ LV L+ I + + + G N F+ N+LI+ K +
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIE---EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 120 ARLLFQACPVL----DPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIK 171
A LLF + + V+ +I+I + + G+LD A M G Y ++I
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 172 GLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIKLAVD 230
G + A +M++ + P +T +++ G+I R+ H + K +
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIA 504
Query: 231 GLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL----VTCNVMLNGYSKTGLVDMAREL 286
+ T L+ + +A +LF++M E N+ VT NVM+ GY + G + A E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 287 FERIPDKDVI 296
+ + +K ++
Sbjct: 565 LKEMTEKGIV 574
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 111/236 (47%), Gaps = 18/236 (7%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLD----PVSCNIMI 139
+ +++ +K + F +SLIN + + +A+ +F+ D V+ N +I
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQ-NDCFGEALEVFKDMMSDSV 194
G+ KA +++ +LF M +G V+Y T+I+GL Q DC A ++FK M+SD V
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC-DMAQKIFKKMVSDGV 461
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
P+ +T ++ ++G++ ++ K ++ + ++ C V +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 255 LFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI----SWGTMI 302
LF + + N++ M++G+ + GL + A LF + + + ++ T+I
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 16/228 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNA 151
G + F +++N K G I A L + D V +I +++A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 152 CQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
LF M KG V+Y ++I+ L + +A + DM+ + PN +T +I A
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 208 CSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----N 263
+ G++ ++ IK ++D + ++L++ +C+ + EA+ +F+ M + N
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 264 LVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
+VT N ++ G+ K V+ ELF + + + +++ T+I Q
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 107 LINMYAKCGSISDARLLFQAC--PVLDP--VSCNIMISGYVKAGQLDNACQLFDIMPGKG 162
L++ K G + A ++F+ ++P + NIMI G KAG++++ LF + KG
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 163 C----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGE 213
+ YTTMI G + EA +F++M D +PN T +I A R G+
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMI 139
+ +++ +K + F NSL+N + + A+ +F+ D V+ N +I
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVV 195
G+ K+ ++++ +LF M +G V+YTT+I+GL + A +VFK M+SD V
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 196 PNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRL 255
P+ +T ++ G++ + K + + + T ++ C V + L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 256 F----DKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPD 292
F K + N+VT N M++G L+ A L +++ +
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVF 186
D V N +I K +D+A LF M KG V+Y+++I L + +A ++
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
DM+ + PN +T +I A + G+ ++ IK ++D + +L++ +C+
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 247 SGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISW 298
+ +A+++F+ M + ++VT N ++ G+ K+ V+ ELF + + D +++
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 299 GTMI 302
T+I
Sbjct: 439 TTLI 442
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 51/264 (19%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQL 148
+KLG+ + +SL+N Y ISDA L + D ++ +I G +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGL--------------------VQNDC------ 178
A L D M +GC V+Y ++ GL ++ D
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 179 ---------FGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAV 229
+AL +FK+M + + PN +T ++IS +G + + + I+ +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 230 DGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARE 285
+ ++ L+ A+ EA +L+D M +R ++ T N ++NG+ +D A++
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 286 LFERIPDK----DVISWGTMIDSY 305
+FE + K DV+++ T+I +
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGF 410
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 71 SALKSC-SSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQAC-- 127
S+L SC S S Q+ S ++ + N N+LI+ + K G +A L+
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 128 PVLDP--VSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGE 181
+DP + N +++G+ +LD A Q+F+ M K C V+Y T+IKG ++ +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 182 ALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMH 241
E+F++M +V + +T +I G+ N + + +
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS--------------- 463
Query: 242 AYCLCSGVGEARRLFDKMPERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVIS 297
D +P +++T +++L+G G ++ A E+F+ + D+
Sbjct: 464 ---------------DGVPP-DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 298 WGTMIDS 304
+ TMI+
Sbjct: 508 YTTMIEG 514
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 103 IQNSLINMYAKCGSISDARLLF----QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIM 158
++N L +M + DA LF ++ P+ V N ++S K + D L + M
Sbjct: 57 LRNGLHDM-----KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 159 PG----KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEI 214
G +Y +I + AL + MM P+ +TL ++++ I
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 215 WNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVM 270
+ + +++ + T L+H L + EA L D+M +R NLVT V+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 271 LNGYSKTGLVDMARELFERIP----DKDVISWGTMIDS 304
+NG K G D+A L ++ + DV+ + T+IDS
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 105 NSLINMYAKCGSISDARLLFQ--------ACPVLDPVSCNIMISGYVKAGQLDNACQLFD 156
NS I+ K G + DA +F P + ++ N+M+ G+ K G L++A LF+
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Query: 157 IMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFG 212
+ + SY ++GLV++ F EA V K M + P+ + ++ + G
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 213 EIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLV----TCN 268
+ + + I L + V + L+H YC V A+ L +M N + TCN
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 269 VMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDS 304
++L+ K G + A EL ++ +K D ++ ++D
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMS 191
N++I + +D A +LFD MP KGC ++ +++G + + LE+ M S
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLV--LVSTN-LMHAYCLCSG 248
V+PN + ++S+ R G + + K+ +GLV +V+ N + A C
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDS---EKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 249 VGEARRLFDKM--------PERNLVTCNVMLNGYSKTGLVDMARELFERIPDKD 294
V +A R+F M P N +T N+ML G+ K GL++ A+ LFE I + D
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 90 SLALKLGFHSNTFIQNSLINMYAKCGSISDARLLF-----QACPVLDPVSCNIMISGYVK 144
S LK+GF ++ I SL+ + + ++ DA +F + + VS +I+I G +
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 145 AGQLDNACQLFDIMPGKGCV----SYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLT 200
G+L+ A L D M KGC +YT +IK L +A +F +M+ PN T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 201 LMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP 260
+I R G+I + +K + V+ L++ YC V A L M
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 261 ER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDS 304
+R N+ T N ++ G + G A L +R+ D D++S+ +ID
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVLDPV----SCNIMI 139
+ ++H ++ +T N LIN + + +A+ +F+ D + + N +I
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 140 SGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQ-NDCFGEALEVFKDMMSDSV 194
+G+ K ++++ +LF M +G V+YTT+I+G Q DC A VFK M+S+ V
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC-DSAQMVFKQMVSNRV 464
Query: 195 VPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARR 254
+ +T ++ +G++ +I K ++ + + ++ C VGEA
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 255 LFDKMPER-NLVTCNVMLNGYSKTGLVDMARELFERIPDKDVI----SWGTMI 302
LF + + ++VT N M++G L+ A +LF ++ + + ++ T+I
Sbjct: 525 LFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 12/184 (6%)
Query: 136 NIMISGYVKAGQLDNACQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMS 191
N +I K ++ A LF M KG V+Y ++I L + +A + +M+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 192 DSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGE 251
+ PN +T +I A + G++ +H I+ ++D + L++ +C+ + + E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 252 ARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMID 303
A+++F M + N+ T N ++NG+ K V+ ELF + + + +++ T+I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 304 SYTQ 307
+ Q
Sbjct: 442 GFFQ 445
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 93 LKLGFHSNTFIQNSLINMYAKCGSISDARLLFQACPVL----DPVSCNIMISGYVKAGQL 148
+KLG+ + +SL+N Y ISDA L + D + +I G +
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 149 DNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNV 204
A L D M +GC V+Y T++ GL + AL + M + + N + +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 205 ISACSRFGEIWNCRMIHALAIKLAVDGL---VLVSTNLMHAYCLCSGVGEARRLFDKMPE 261
I + ++ + + L ++ G+ V+ +L++ C +A RL M E
Sbjct: 265 IDSLCKYRHV---EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 262 R----NLVTCNVMLNGYSKTG-LVDMAR---ELFERIPDKDVISWGTMIDSY 305
+ N+VT N +++ + K G LV+ + E+ +R D D I++ +I+ +
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 100 NTFIQNSLINMYAKCGSISDARLLFQACP--VLDPVS--CNIMISGYVKAGQLDNACQLF 155
+T ++LI+ Y K G A LF + P ++ Y K G+++ A LF
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 156 DIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDL---TLMNVISAC 208
+ M GC +YT +IKGL + EA +KDM+ D + P+ + LMN++
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 209 SRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL---- 264
R E+ N + + + +V +T + + + V E FDKM ++
Sbjct: 352 GRVEELTN--VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSE 409
Query: 265 VTCNVMLNGYSKTGLVDMARELFERIPDK 293
T +++++GY KT V+ A L E + +K
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEK 438
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 16/219 (7%)
Query: 105 NSLINMYAKCGSISDARLLFQACPV--LDP--VSCNIMISGYVKAGQLDNACQLFDIMPG 160
+L+N +A+ G A +F+ L+P N ++ Y +AG A ++F +M
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
GC SY M+ + +A VF++M + P + M ++SA S+ ++
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE----RNLVTCNVMLN 272
C I + V+ V ++++ Y + ++ +M ++ T N+++N
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 504
Query: 273 GYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
Y K G ++ ELF + +K DV++W + I +Y++
Sbjct: 505 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQLDNA 151
G +TF+ NS++N+Y + G + + D + NI+I+ Y KAG L+
Sbjct: 456 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 515
Query: 152 CQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+LF + K V++T+ I + + + LEVF++M+ P+ T ++SA
Sbjct: 516 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Query: 208 CS 209
CS
Sbjct: 576 CS 577
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 16/219 (7%)
Query: 105 NSLINMYAKCGSISDARLLFQACPV--LDP--VSCNIMISGYVKAGQLDNACQLFDIMPG 160
+L+N +A+ G A +F+ L+P N ++ Y +AG A ++F +M
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 161 KGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
GC SY M+ + +A VF++M + P + M ++SA S+ ++
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPE----RNLVTCNVMLN 272
C I + V+ V ++++ Y + ++ +M ++ T N+++N
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 273 GYSKTGLVDMARELFERIPDK----DVISWGTMIDSYTQ 307
Y K G ++ ELF + +K DV++W + I +Y++
Sbjct: 483 IYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQLDNA 151
G +TF+ NS++N+Y + G + + D + NI+I+ Y KAG L+
Sbjct: 434 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 493
Query: 152 CQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+LF + K V++T+ I + + + LEVF++M+ P+ T ++SA
Sbjct: 494 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Query: 208 CS 209
CS
Sbjct: 554 CS 555
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLF----QACPVLDPVSCNIMISGYVKAGQLDNA 151
G N + N ++N K G + + D V+ N +IS Y G ++ A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 152 CQLFDIMPGKG----CVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI-S 206
+L + MPGKG +Y T+I GL ++ + A EVF +M+ + P+ T +++
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 207 ACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNLVT 266
AC + + ++ + + V LV S+ +M + + +A F+ + E L+
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSS-MMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 267 CNV----MLNGYSKTGLVDMA----RELFERIPDKDVISWGTMI 302
NV ++ GY + G++ +A E+ ++ DV+++ T++
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGK----GCVSYTTMIKGLVQNDCFGEALEVF 186
D + I+I G+ K G L NA +LF M K V+Y T++ G + A E++
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 187 KDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLC 246
DM+S ++P ++ +++A G + + I + V++ +++ YC
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 247 SGVGEARRLFDKMPERNLV----TCNVMLNGYSKTGLVDMARELFERIPDK------DVI 296
+ +KM V + N ++ G+ + + A L +++ ++ DV
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 297 SWGTMIDSY 305
++ +++ +
Sbjct: 659 TYNSILHGF 667
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 76 CSSISSPSQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDA----RLLFQACPVLD 131
C + R++ L GF + ++LI Y K G +S A R + Q ++
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 132 PVSCNIMISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFK 187
++ N ++ K +LD A L + +G V+Y T+I G + + +ALE++
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510
Query: 188 DMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST---NLMHAYC 244
+M + P T ++I G+ + +LA GL+ + +++ YC
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGK---TELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 245 LCSGVGEARRLFDKMPERNL----VTCNVMLNGYSKTGLVDMARELFERIPDK---DVIS 297
V +A +++ + + TCN++LNG K G+ + A F + ++ D ++
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT 627
Query: 298 WGTMIDSY 305
+ TMI ++
Sbjct: 628 YNTMISAF 635
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 20/263 (7%)
Query: 53 FCNARQHQN----PAECELALVSALKSCSSISSPSQGRQIHSLALKLGFHSNTFIQNSLI 108
CN+ H N P + AL + P QI ++L N N+L+
Sbjct: 114 LCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL 173
Query: 109 ---NMYAKCGSISDARLLF----QACPVLDPVSCNIMISGYVKAGQLDNACQLFDIMPGK 161
Y SIS AR +F + L+ + N++++GY G+L++A + + M +
Sbjct: 174 IGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 162 -----GCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWN 216
V+Y T++K + + + E+ DM + +VPN +T N++ + G +
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 217 CRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMP----ERNLVTCNVMLN 272
I L + V + L++ C + E L D M + ++VT N +++
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 273 GYSKTGLVDMARELFERIPDKDV 295
G + GL AR+L E++ + V
Sbjct: 354 GCFELGLSLEARKLMEQMENDGV 376
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 33/234 (14%)
Query: 94 KLGFHSNTFIQNSLINMYAKCGSISDA----RLLFQACPVLDPVSCNIMISGYVKAGQLD 149
K G N N+L+ Y K GS+ +A L+ Q + D + NI+I+G AG +
Sbjct: 268 KNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMR 327
Query: 150 NACQLFDIMPG----KGCVSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVI 205
+L D M V+Y T+I G + EA ++ + M +D V N +T
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT----- 382
Query: 206 SACSRFGEIWNCRMIHALAIKLAVDGLV---------LVSTNLMHAYCLCSGVGEARRLF 256
W C+ A+ V LV + L+ AY + A +
Sbjct: 383 ---HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439
Query: 257 DKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMI 302
+M ++ N +T N +L+ K +D A L + D +++GT+I
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 17/227 (7%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDA-RLL---FQACPVLDPVSCNIMISGYVKAGQLDNA 151
G + F N LI+ G SDA RLL + D V N +I +VK G+L A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 152 CQLFDIM-PGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVIS 206
+L+D M K C V+Y T+IKG + E +EVF++M +V N +T +I
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 207 ACSRFGEIWNCRMIHALAIKLAVDGLVLVSTNLMHAYCLCSGVGEARRLFDKMPERNL-- 264
+ + N +M+ + V ++ L+ C V A +F+ M +R++
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 265 --VTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMIDSY 305
VT M+ K G V+ +LF + K +V+++ TM+ +
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACPV----LDPVSCNIMISGYVKAGQLDNA 151
G H + N L++ G++ A ++F+ LD V+ MI KAG++++
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
LF + KG V+YTTM+ G + EA +F +M D +PN T +I A
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 208 CSRFGE 213
R G+
Sbjct: 541 RLRDGD 546
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 47 QHCIRIFCNARQHQNPAECELALVSALKSCSSISSPSQ-GRQIHSLALKLGFHSNTFIQN 105
Q IR F H + + LK+CS +S + G+Q+H+ A+KLGF S+ I+
Sbjct: 278 QEVIRDFIEMGNHGIKKNVSV-FSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRC 336
Query: 106 SLINMYAKCGSISDARLLFQACPVLDPVSC-NIMISGYVKAGQLDNACQLFDIMPGKGCV 164
LI MY K G + DA +F++ VSC N M++ Y++ G A +L M G
Sbjct: 337 RLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
Query: 165 SYTTMI 170
++ T++
Sbjct: 397 AHDTLL 402
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 73 LKSCSSISSPSQGRQIHSLALKLGF--HSNTFIQNSLINMYAKCGSISDARLLFQACPVL 130
LK+C+ I G+Q+H+L KLGF ++++ SLI Y + + DA L+
Sbjct: 200 LKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLH----- 254
Query: 131 DPVSCNIMISGYVKAGQLDNACQLFDIMPGKGCVSYTTMIKGLVQNDCFGEALEVFKDMM 190
QL NA V++ + + F E + F +M
Sbjct: 255 ----------------QLSNA----------NTVAWAAKVTNDYREGEFQEVIRDFIEMG 288
Query: 191 SDSVVPNDLTLMNVISACSRFGEIWNC-RMIHALAIKLAVDGLVLVSTNLMHAYCLCSGV 249
+ + N NV+ ACS + + +HA AIKL + L+ L+ Y V
Sbjct: 289 NHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKV 348
Query: 250 GEARRLFDKMPERNLVTC-NVMLNGYSKTGLVDMARELFERIPDKDVISWGTMIDS 304
+A ++F + V+C N M+ Y + G+ A +L ++ + + T+++
Sbjct: 349 KDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLNE 404
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 32/242 (13%)
Query: 96 GFHSNTFIQNSLINMYAKCGSISDARLLFQACP----VLDPVSCNIMISGYVKAGQLDNA 151
GF +T + ++N + A LLF+ V D + IM+ + KAG ++ A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 152 CQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSVVPNDLTLMNVISA 207
+ F+ M GC V+YT +I ++ A E+F+ M+S+ +PN +T +I
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 208 CSRFGEIWN-CRMIHALAIKLAVDGL---------------VLVSTNLMHAYCLCSGVGE 251
+ G++ C++ + V + V+ L+ +C V E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 252 ARRLFDKMP----ERNLVTCNVMLNGYSKTGLVDMARELFERIPDK----DVISWGTMID 303
AR+L D M E N + + +++G K G +D A+E+ + + + ++ ++ID
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 304 SY 305
Y
Sbjct: 718 RY 719
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 34/256 (13%)
Query: 83 SQGRQIHSLALKLGFHSNTFIQNSLINMYAKCGSISDARLLFQ-----ACPVLDPVSCNI 137
Q R+ + ++G N +LI+ Y K +S A LF+ C + + V+ +
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC-LPNIVTYSA 593
Query: 138 MISGYVKAGQLDNACQLFDIMPGK--------------------GCVSYTTMIKGLVQND 177
+I G+ KAGQ++ ACQ+F+ M G V+Y ++ G ++
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 178 CFGEALEVFKDMMSDSVVPNDLTLMNVISACSRFGEIWNCRMIHALAIKLAVDGLVLVST 237
EA ++ M + PN + +I + G++ + + + + +
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 238 NLMHAYCLCSGVGEARRLFDKMPER----NLVTCNVMLNGYSKTGLVDMARELFERIPDK 293
+L+ Y A ++ KM E N+V M++G K G D A +L + + +K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 294 ----DVISWGTMIDSY 305
+V+++ MID +
Sbjct: 774 GCQPNVVTYTAMIDGF 789
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 84 QGRQIHSLALKLGFHSNTFIQNSLINMYAKC-----GSISDARLLFQACPVLDPVSCNIM 138
+ +++ + + GF + + +SLI+ Y K S +++L +C + V M
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP-NVVIYTEM 750
Query: 139 ISGYVKAGQLDNACQLFDIMPGKGC----VSYTTMIKGLVQNDCFGEALEVFKDMMSDSV 194
I G K G+ D A +L +M KGC V+YT MI G LE+ + M S V
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 195 VPNDLTLMNVISACSRFGEI 214
PN +T +I C + G +
Sbjct: 811 APNYVTYRVLIDHCCKNGAL 830