Miyakogusa Predicted Gene

Lj0g3v0147509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147509.1 tr|A4S673|A4S673_OSTLU Predicted protein
(Fragment) OS=Ostreococcus lucimarinus (strain CCE9901)
GN=,31.08,1e-18,seg,NULL; DUF179,Protein of unknown function DUF179;
no description,NULL; VC0467-like,NULL; SUBFAMIL,CUFF.9035.1
         (350 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G33780.1 | Symbols:  | Protein of unknown function (DUF179) |...   367   e-101
AT3G29240.2 | Symbols:  | Protein of unknown function (DUF179) |...   177   8e-45
AT3G29240.1 | Symbols:  | Protein of unknown function (DUF179) |...   177   8e-45
AT3G19780.2 | Symbols:  | LOCATED IN: endomembrane system; CONTA...    69   7e-12
AT3G19780.1 | Symbols:  | LOCATED IN: endomembrane system; CONTA...    69   7e-12

>AT1G33780.1 | Symbols:  | Protein of unknown function (DUF179) |
           chr1:12244799-12246034 REVERSE LENGTH=325
          Length = 325

 Score =  367 bits (941), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/264 (68%), Positives = 210/264 (79%), Gaps = 10/264 (3%)

Query: 87  GDGIRGKNSSDGDKP-DNNPEKCHHTNLDWREFRAKLFRDELKEISDTDAHQGGTLHNSK 145
           GD  +    S+G+K  D+   K    N DWREFRA LF  E +E ++ + H+      S+
Sbjct: 70  GDASQENKPSNGNKSGDSAAPKSFGLNTDWREFRANLFMKEQEEKAEAEGHE------SE 123

Query: 146 PLGTKWAHPIPVPETGCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLH 205
           P+G KWAHPIP PETGCVLVATEKLDG RTF RTVVLLLR+GTRHPQEGPFG+VINRPLH
Sbjct: 124 PIGLKWAHPIPFPETGCVLVATEKLDGYRTFARTVVLLLRAGTRHPQEGPFGVVINRPLH 183

Query: 206 KKIKHMKPTNHDLLTTFSDCSLHFGGPLEASMFLLKTGEKSKLPGLEEVIPGLCFGARNS 265
           K IKHMK T  +L TTFS+CSL+FGGPLEASMFLLKTG+K+K+PG EEV+PGL FG RNS
Sbjct: 184 KNIKHMKSTKTELATTFSECSLYFGGPLEASMFLLKTGDKTKIPGFEEVMPGLNFGTRNS 243

Query: 266 LDSAAALVKKGILRPHDCSFFVGYAGWQMDQLRDEIESNYWHVAACGSSLLCGALSDPSE 325
           LD AA LVKKG+L+P +  FFVGYAGWQ+DQLR+EIES+YWHVAAC S L+CGA    SE
Sbjct: 244 LDEAAVLVKKGVLKPQEFRFFVGYAGWQLDQLREEIESDYWHVAACSSDLICGA---SSE 300

Query: 326 SLWEEILQLMGGHYSELSRKPKQD 349
           +LWEEILQLMGG YSELSRKPK D
Sbjct: 301 NLWEEILQLMGGQYSELSRKPKLD 324


>AT3G29240.2 | Symbols:  | Protein of unknown function (DUF179) |
           chr3:11191780-11192868 FORWARD LENGTH=317
          Length = 317

 Score =  177 bits (450), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 141/241 (58%), Gaps = 19/241 (7%)

Query: 111 TNLDWREFRAKLFRDELKEISDTDAHQGGT---LHNSKP-------LGTKWAHPIPVPET 160
           ++ DWREFRA+L   E    S+ D         + + +P       +G+KWAH I  PET
Sbjct: 74  SDADWREFRARLVAGEQAATSEKDQPSWSNPDMVVDYQPSSSSLITIGSKWAHKIHEPET 133

Query: 161 GCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPTNHDLLT 220
           GC+L+ATEKLDGV  FE+TV+LLL  G      GP G+++NRP    IK  K T  D+  
Sbjct: 134 GCLLIATEKLDGVHIFEKTVILLLSVG----PSGPIGVILNRPSLMSIKETKSTILDMAG 189

Query: 221 TFSDCSLHFGGPLEASMFLL--KTG---EKSKLPGLEEVIPGLCFGARNSLDSAAALVKK 275
           TFSD  L FGGPLE  +FL+  ++G   E  K     +V+ GL +G R S+  AA +VK+
Sbjct: 190 TFSDKRLFFGGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLYYGTRESVGLAAEMVKR 249

Query: 276 GILRPHDCSFFVGYAGWQMDQLRDEIESNYWHVAACGSSLLCGALSDPSESLWEEILQLM 335
            ++   +  FF GY GW+ +QL+ EI   YW VAAC S+++    +  S  LW+E+L L+
Sbjct: 250 NLVGRSELRFFDGYCGWEKEQLKAEILGGYWTVAACSSTVVELGSAVQSHGLWDEVLGLI 309

Query: 336 G 336
           G
Sbjct: 310 G 310


>AT3G29240.1 | Symbols:  | Protein of unknown function (DUF179) |
           chr3:11191780-11192868 FORWARD LENGTH=317
          Length = 317

 Score =  177 bits (450), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 141/241 (58%), Gaps = 19/241 (7%)

Query: 111 TNLDWREFRAKLFRDELKEISDTDAHQGGT---LHNSKP-------LGTKWAHPIPVPET 160
           ++ DWREFRA+L   E    S+ D         + + +P       +G+KWAH I  PET
Sbjct: 74  SDADWREFRARLVAGEQAATSEKDQPSWSNPDMVVDYQPSSSSLITIGSKWAHKIHEPET 133

Query: 161 GCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPTNHDLLT 220
           GC+L+ATEKLDGV  FE+TV+LLL  G      GP G+++NRP    IK  K T  D+  
Sbjct: 134 GCLLIATEKLDGVHIFEKTVILLLSVG----PSGPIGVILNRPSLMSIKETKSTILDMAG 189

Query: 221 TFSDCSLHFGGPLEASMFLL--KTG---EKSKLPGLEEVIPGLCFGARNSLDSAAALVKK 275
           TFSD  L FGGPLE  +FL+  ++G   E  K     +V+ GL +G R S+  AA +VK+
Sbjct: 190 TFSDKRLFFGGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLYYGTRESVGLAAEMVKR 249

Query: 276 GILRPHDCSFFVGYAGWQMDQLRDEIESNYWHVAACGSSLLCGALSDPSESLWEEILQLM 335
            ++   +  FF GY GW+ +QL+ EI   YW VAAC S+++    +  S  LW+E+L L+
Sbjct: 250 NLVGRSELRFFDGYCGWEKEQLKAEILGGYWTVAACSSTVVELGSAVQSHGLWDEVLGLI 309

Query: 336 G 336
           G
Sbjct: 310 G 310


>AT3G19780.2 | Symbols:  | LOCATED IN: endomembrane system; CONTAINS
            InterPro DOMAIN/s: Protein of unknown function DUF179
            (InterPro:IPR003774), Thioredoxin fold
            (InterPro:IPR012335), Thioredoxin-like fold
            (InterPro:IPR012336); BEST Arabidopsis thaliana protein
            match is: Protein of unknown function (DUF179)
            (TAIR:AT1G33780.1). | chr3:6870238-6874677 FORWARD
            LENGTH=1058
          Length = 1058

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 156  PVPETGCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPTN 215
            P  +TG VLVATEKL    TF ++ +L++++G   P+ G  G++ N+ +  K     P  
Sbjct: 898  PQVKTGTVLVATEKLAASLTFAKSKILIIKAG---PEIGFLGLIFNKRIRWK---SFPDL 951

Query: 216  HDLLTTFSDCSLHFGGPLEAS----MFLLKTGEKSKLPGLEEVIPGLCFGARNSLDSAAA 271
             +      +  L FGGP+       + L +  + S      E+ PG+ F    S+     
Sbjct: 952  GETAELLKETPLSFGGPVVDPGIPLLALTRERDSSTNHDHPEISPGVYFLDHQSVARRIQ 1011

Query: 272  LVKKGILRPHDCSFFVGYAGWQMDQLRDEIESNYWHV 308
             +K   L P +  FF+GY+ W  +QL DEI    W V
Sbjct: 1012 ELKSRELNPSEYWFFLGYSSWSYEQLFDEIGLGVWDV 1048


>AT3G19780.1 | Symbols:  | LOCATED IN: endomembrane system; CONTAINS
            InterPro DOMAIN/s: Protein of unknown function DUF179
            (InterPro:IPR003774), Thioredoxin fold
            (InterPro:IPR012335), Thioredoxin-like fold
            (InterPro:IPR012336); BEST Arabidopsis thaliana protein
            match is: Protein of unknown function (DUF179)
            (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in
            32 species: Archae - 0; Bacteria - 24; Metazoa - 11;
            Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4
            (source: NCBI BLink). | chr3:6870238-6874677 FORWARD
            LENGTH=1059
          Length = 1059

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 156  PVPETGCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPTN 215
            P  +TG VLVATEKL    TF ++ +L++++G   P+ G  G++ N+ +  K     P  
Sbjct: 899  PQVKTGTVLVATEKLAASLTFAKSKILIIKAG---PEIGFLGLIFNKRIRWK---SFPDL 952

Query: 216  HDLLTTFSDCSLHFGGPLEAS----MFLLKTGEKSKLPGLEEVIPGLCFGARNSLDSAAA 271
             +      +  L FGGP+       + L +  + S      E+ PG+ F    S+     
Sbjct: 953  GETAELLKETPLSFGGPVVDPGIPLLALTRERDSSTNHDHPEISPGVYFLDHQSVARRIQ 1012

Query: 272  LVKKGILRPHDCSFFVGYAGWQMDQLRDEIESNYWHV 308
             +K   L P +  FF+GY+ W  +QL DEI    W V
Sbjct: 1013 ELKSRELNPSEYWFFLGYSSWSYEQLFDEIGLGVWDV 1049