Miyakogusa Predicted Gene

Lj0g3v0147089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147089.1 Non Chatacterized Hit- tr|I1LAL9|I1LAL9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22529
PE,91.89,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
FrhB_FdhB_C,Coenzyme F420 hydrogenase/dehydrogenase,CUFF.8992.1
         (433 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04620.1 | Symbols:  | coenzyme F420 hydrogenase family / deh...   763   0.0  

>AT1G04620.1 | Symbols:  | coenzyme F420 hydrogenase family /
           dehydrogenase, beta subunit family |
           chr1:1282869-1286492 REVERSE LENGTH=462
          Length = 462

 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/405 (86%), Positives = 384/405 (94%)

Query: 29  LRQDWRKRSKAIPPGGTYPAKDHCSHCGLCDTYYVAHVKNACAFLGDGMSRIERLEPVVH 88
           LR+DWR++S+ IPPGGTYPAKDHCS CGLCDTYY+AHVK ACAFLGDGMSRIE LEPVVH
Sbjct: 39  LREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLEPVVH 98

Query: 89  GRGRKTDTLDETYLGVHEELLYARKLKPVEGAQWTGIVTTIAIEMLKSGMVEAVICVQSD 148
           GRGRK D+L +TY GVH+E LYARKLKPVEGAQWTGIVTTIAIEMLKS MVEAV+CVQSD
Sbjct: 99  GRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVCVQSD 158

Query: 149 PDDRFAPRPVLARTPEEVLAAKGVKPTLSPNLNTLALVEAAGVKRLLFCGVGCQVQALRS 208
           P+DR +PRPVLARTPEEVLAA+GVKPTLSPNLNTL L+EA+GVKRLLFCGVGCQVQALRS
Sbjct: 159 PEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQALRS 218

Query: 209 VEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASHSPETVLHYEFMQDYQVQLKHLDGHI 268
           VE HLNLEKLYVLGTNCVDNGTR+GLDKFLKAAS  PETVLHYEFMQDY+VQLKHLDGHI
Sbjct: 219 VEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYKVQLKHLDGHI 278

Query: 269 EEVPYFCLPANDLVDVIAPSCYSCFDYTNALADLVVGYMGVPKYSGISMTQHPQYVTVRN 328
           EEVPYF LPANDLVDVIAPSCYSCFDYTNALADLV+GYMGVPKYSG++MT HPQY+TVRN
Sbjct: 279 EEVPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYITVRN 338

Query: 329 ERGREMLSLVKNLLDITPTTSAGDRRPYVMETVKADDNAKFGRGPAQPAPRFIGNLIAFI 388
           ERG+EMLSLV+NLL+ITPT S+GDRRP+V ETVKADD AKFG+GPAQPAP F+GN+IAFI
Sbjct: 339 ERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNIIAFI 398

Query: 389 LNLIGPKGLEFARYSLDYHTIRNYLYVNRKWGKERADKHIPTYAK 433
           LNL+GPKGLEFARYSLDYHTIRNYLYVNRKWGK+RA+ H+P+YAK
Sbjct: 399 LNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAK 443