Miyakogusa Predicted Gene
- Lj0g3v0146829.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0146829.2 Non Chatacterized Hit- tr|B9RLS7|B9RLS7_RICCO
Heparanase-2, putative OS=Ricinus communis
GN=RCOM_147,67.42,0,(Trans)glycosidases,Glycoside hydrolase,
superfamily; HEPARANASE-RELATED,NULL;
HEPARANASE-RELATED,Gl,CUFF.8967.2
(547 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07830.1 | Symbols: AtGUS2, GUS2 | glucuronidase 2 | chr5:250... 630 0.0
AT5G61250.1 | Symbols: AtGUS1, GUS1 | glucuronidase 1 | chr5:246... 617 e-177
AT5G61250.2 | Symbols: AtGUS1, GUS1 | glucuronidase 1 | chr5:246... 617 e-177
AT5G34940.2 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132... 438 e-123
AT5G34940.3 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132... 335 4e-92
AT5G34940.1 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132... 321 9e-88
>AT5G07830.1 | Symbols: AtGUS2, GUS2 | glucuronidase 2 |
chr5:2504168-2506567 FORWARD LENGTH=543
Length = 543
Score = 630 bits (1625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/525 (56%), Positives = 385/525 (73%), Gaps = 8/525 (1%)
Query: 20 EDIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAK 79
++++ S+++ GA+ ET +NF+CAT+DWWPHDKC+Y+ CPWGYSSV+N+DL+ P L K
Sbjct: 25 QEMKRASIVIQGARRVCETDENFVCATLDWWPHDKCNYDQCPWGYSSVINMDLTRPLLTK 84
Query: 80 AIQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQF 139
AI+AFKPLRIR+GGSLQDQV+YDVG+LK PC FQKM GLFGFSKGCLHM+RWDELN F
Sbjct: 85 AIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQKMNSGLFGFSKGCLHMKRWDELNSF 144
Query: 140 FNETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSG 199
TGA+VTFGLNAL GRH++ W G W N DF+ YT+SKGY IDSWE GNELSG
Sbjct: 145 LTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQDFLNYTVSKGYVIDSWEFGNELSG 204
Query: 200 KGIGASVAVAQYGKDVIKLKQILDVLYESSKF-KPSLVAPGGFYEKEWYDKLLQVSGSGI 258
G+GASV+ YGKD+I LK +++ +Y++S KP LVAPGGFYE++WY KLL++SG +
Sbjct: 205 SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKPILVAPGGFYEQQWYTKLLEISGPSV 264
Query: 259 INVLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGA 318
++V++HH+YNLG G+D L +KI+DP LS+V F +++ TIQ+HGPW S WVGE+GGA
Sbjct: 265 VDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKTFKDVNQTIQEHGPWASPWVGESGGA 324
Query: 319 YNSGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSA 378
YNSGGR VS+TF++SFWYLDQLG+++ + TKVYCRQTL+ SA
Sbjct: 325 YNSGGRHVSDTFIDSFWYLDQLGMSARHNTKVYCRQTLVGGFYGLLEKGTFVPNPDYYSA 384
Query: 379 LLWHRLVGKKGLAVSNDISSPFFSTFAHCSKDSVGVTLLLINLSNQTNFILNVQNPVTAS 438
LLWHRL+GK LAV D P +AHCSK GVTLLLINLSNQ++F ++V N +
Sbjct: 385 LLWHRLMGKGVLAVQTD-GPPQLRVYAHCSKGRAGVTLLLINLSNQSDFTVSVSNGINV- 442
Query: 439 AEGNAVTKSTHKGNSFFDHLKRTFSWVGTKGSE-VTYREEYHLTSHDDIIRSQTMVLNGI 497
+ + K S D LKR FSW+G+K S+ REEYHLT + ++RS+TMVLNG
Sbjct: 443 ----VLNAESRKKKSLLDTLKRPFSWIGSKASDGYLNREEYHLTPENGVLRSKTMVLNGK 498
Query: 498 PLELTSEGNFPPLDPVRSNVLSPIYMAPLSIAFIVYPNFDAPACA 542
L+ T+ G+ P L+PV +V SP+ + PLS++FIV PNFDA AC+
Sbjct: 499 SLKPTATGDIPSLEPVLRSVNSPLNVLPLSMSFIVLPNFDASACS 543
>AT5G61250.1 | Symbols: AtGUS1, GUS1 | glucuronidase 1 |
chr5:24632294-24634597 REVERSE LENGTH=539
Length = 539
Score = 617 bits (1590), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/523 (56%), Positives = 382/523 (73%), Gaps = 7/523 (1%)
Query: 21 DIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKA 80
++E +L+++G++ AET +NFICAT+DWWP +KC+Y+ CPWGY+S++NL+L+ P LAKA
Sbjct: 23 NMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLLAKA 82
Query: 81 IQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFF 140
IQAF+ LRIR+GGSLQDQV+YDVG LK PC F+K GLFGFS+GCL+M+RWDE+N FF
Sbjct: 83 IQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLFGFSEGCLYMKRWDEVNHFF 142
Query: 141 NETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGK 200
N TGAIVTFGLNALHGR++++ W G W TN DF+ YT+SKGY IDSWE GNELSG
Sbjct: 143 NATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYTVSKGYAIDSWEFGNELSGS 202
Query: 201 GIGASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGGFYEKEWYDKLLQVSGSGIIN 260
GI ASV+V YGKD+I LK ++ +Y++S+ KP +VAPGGF+E++WY +LL++SG G+++
Sbjct: 203 GIWASVSVELYGKDLIVLKNVIKNVYKNSRTKPLVVAPGGFFEEQWYSELLRLSGPGVLD 262
Query: 261 VLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYN 320
VL+HH+YNLGPG+D L KILDP LS + +F+N++ TIQ+HGPW +AWVGEAGGA+N
Sbjct: 263 VLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQTIQEHGPWAAAWVGEAGGAFN 322
Query: 321 SGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSALL 380
SGGR VS TF+NSFWYLDQLGI+S + TKVYCRQ L+ SALL
Sbjct: 323 SGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGFYGLLEKETFVPNPDYYSALL 382
Query: 381 WHRLVGKKGLAVSNDISSPFFSTFAHCSKDSVGVTLLLINLSNQTNFILNVQNPVTASAE 440
WHRL+GK L V +S + + HCSK G+T+LLINLS T F + V N V +
Sbjct: 383 WHRLMGKGILGVQT-TASEYLRAYVHCSKRRAGITILLINLSKHTTFTVAVSNGVKVVLQ 441
Query: 441 GNAVTKSTHKGNSFFDHLKRTFSWVGTKGSE-VTYREEYHLTSHDDIIRSQTMVLNGIPL 499
++ K SF + +K SWVG K S+ REEYHL+ D +RS+ M+LNG PL
Sbjct: 442 AESM-----KRKSFLETIKSKVSWVGNKASDGYLNREEYHLSPKDGDLRSKIMLLNGKPL 496
Query: 500 ELTSEGNFPPLDPVRSNVLSPIYMAPLSIAFIVYPNFDAPACA 542
T+ G+ P L+PVR V SP+Y+ PLSI+FIV P FDAPAC+
Sbjct: 497 VPTATGDIPKLEPVRHGVKSPVYINPLSISFIVLPTFDAPACS 539
>AT5G61250.2 | Symbols: AtGUS1, GUS1 | glucuronidase 1 |
chr5:24632294-24634597 REVERSE LENGTH=539
Length = 539
Score = 617 bits (1590), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/523 (56%), Positives = 382/523 (73%), Gaps = 7/523 (1%)
Query: 21 DIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKA 80
++E +L+++G++ AET +NFICAT+DWWP +KC+Y+ CPWGY+S++NL+L+ P LAKA
Sbjct: 23 NMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLLAKA 82
Query: 81 IQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFF 140
IQAF+ LRIR+GGSLQDQV+YDVG LK PC F+K GLFGFS+GCL+M+RWDE+N FF
Sbjct: 83 IQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLFGFSEGCLYMKRWDEVNHFF 142
Query: 141 NETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGK 200
N TGAIVTFGLNALHGR++++ W G W TN DF+ YT+SKGY IDSWE GNELSG
Sbjct: 143 NATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYTVSKGYAIDSWEFGNELSGS 202
Query: 201 GIGASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGGFYEKEWYDKLLQVSGSGIIN 260
GI ASV+V YGKD+I LK ++ +Y++S+ KP +VAPGGF+E++WY +LL++SG G+++
Sbjct: 203 GIWASVSVELYGKDLIVLKNVIKNVYKNSRTKPLVVAPGGFFEEQWYSELLRLSGPGVLD 262
Query: 261 VLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYN 320
VL+HH+YNLGPG+D L KILDP LS + +F+N++ TIQ+HGPW +AWVGEAGGA+N
Sbjct: 263 VLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQTIQEHGPWAAAWVGEAGGAFN 322
Query: 321 SGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSALL 380
SGGR VS TF+NSFWYLDQLGI+S + TKVYCRQ L+ SALL
Sbjct: 323 SGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGFYGLLEKETFVPNPDYYSALL 382
Query: 381 WHRLVGKKGLAVSNDISSPFFSTFAHCSKDSVGVTLLLINLSNQTNFILNVQNPVTASAE 440
WHRL+GK L V +S + + HCSK G+T+LLINLS T F + V N V +
Sbjct: 383 WHRLMGKGILGVQT-TASEYLRAYVHCSKRRAGITILLINLSKHTTFTVAVSNGVKVVLQ 441
Query: 441 GNAVTKSTHKGNSFFDHLKRTFSWVGTKGSE-VTYREEYHLTSHDDIIRSQTMVLNGIPL 499
++ K SF + +K SWVG K S+ REEYHL+ D +RS+ M+LNG PL
Sbjct: 442 AESM-----KRKSFLETIKSKVSWVGNKASDGYLNREEYHLSPKDGDLRSKIMLLNGKPL 496
Query: 500 ELTSEGNFPPLDPVRSNVLSPIYMAPLSIAFIVYPNFDAPACA 542
T+ G+ P L+PVR V SP+Y+ PLSI+FIV P FDAPAC+
Sbjct: 497 VPTATGDIPKLEPVRHGVKSPVYINPLSISFIVLPTFDAPACS 539
>AT5G34940.2 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
chr5:13235912-13238718 REVERSE LENGTH=536
Length = 536
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/520 (43%), Positives = 308/520 (59%), Gaps = 12/520 (2%)
Query: 23 EHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKAIQ 82
E+G++ V G A ++FICAT+DWWP +KCDY C W ++S++NLDL++ L AI+
Sbjct: 29 ENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLNNVILQNAIK 88
Query: 83 AFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFFNE 142
AF PL+IR+GG+LQD V+Y+ K PC F K LFG+++GCL M RWDELN FF +
Sbjct: 89 AFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFGYTQGCLPMRRWDELNAFFRK 148
Query: 143 TGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGKGI 202
TG V FGLNAL GR S+ G W TN FI++T Y ID WELGNEL G G+
Sbjct: 149 TGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWELGNELCGSGV 208
Query: 203 GASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGGFYEKEWYDKLLQVSGSGIINVL 262
GA V QY D I L+ I++ +Y++ P ++ PGGF+E +W+ + L + + +N
Sbjct: 209 GARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFEVDWFTEYLNKAENS-LNAT 267
Query: 263 SHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYNSG 322
+ H+Y+LGPG DEHL KIL+P L + F +L I+ AWVGE+GGAYNSG
Sbjct: 268 TRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNSSTKAVAWVGESGGAYNSG 327
Query: 323 GRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSALLWH 382
VSN F+ SFWYLDQLG+AS Y TK YCRQ+LI SAL+W
Sbjct: 328 RNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALIWR 387
Query: 383 RLVGKKGLAVSNDISSPFFSTFAHCSKDSVGVTLLLINLSNQTNFILNVQNPVTASAEGN 442
+L+G+K L + + S + HC++ S G+T+LL+NL N T + V+ + S
Sbjct: 388 QLMGRKALFTTFSGTKKIRS-YTHCARQSKGITVLLMNLDNTTTVVAKVELNNSFSLRHT 446
Query: 443 AVTKSTHKGNSFFDHLKRTFSWVGTKGSEVTYREEYHLTSHDDIIRSQTMVLNGIPLELT 502
KS KR S + + V REEYHLT+ D + SQTM+LNG L++
Sbjct: 447 KHMKS----------YKRASSQLFGGPNGVIQREEYHLTAKDGNLHSQTMLLNGNALQVN 496
Query: 503 SEGNFPPLDPVRSNVLSPIYMAPLSIAFIVYPNFDAPACA 542
S G+ PP++P+ N PI +AP SI F+ N PACA
Sbjct: 497 SMGDLPPIEPIHINSTEPITIAPYSIVFVHMRNVVVPACA 536
>AT5G34940.3 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
chr5:13236566-13238718 REVERSE LENGTH=382
Length = 382
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 162/335 (48%), Positives = 213/335 (63%), Gaps = 1/335 (0%)
Query: 23 EHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKAIQ 82
E+G++ V G A ++FICAT+DWWP +KCDY C W ++S++NLDL+
Sbjct: 29 ENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLTIVVPISKNT 88
Query: 83 AFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFFNE 142
AF PL+IR+GG+LQD V+Y+ K PC F K LFG+++GCL M RWDELN FF +
Sbjct: 89 AFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFGYTQGCLPMRRWDELNAFFRK 148
Query: 143 TGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGKGI 202
TG V FGLNAL GR S+ G W TN FI++T Y ID WELGNEL G G+
Sbjct: 149 TGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWELGNELCGSGV 208
Query: 203 GASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGGFYEKEWYDKLLQVSGSGIINVL 262
GA V QY D I L+ I++ +Y++ P ++ PGGF+E +W+ + L + + +N
Sbjct: 209 GARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFEVDWFTEYLNKAENS-LNAT 267
Query: 263 SHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYNSG 322
+ H+Y+LGPG DEHL KIL+P L + F +L I+ AWVGE+GGAYNSG
Sbjct: 268 TRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNSSTKAVAWVGESGGAYNSG 327
Query: 323 GRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLI 357
VSN F+ SFWYLDQLG+AS Y TK YCRQ+LI
Sbjct: 328 RNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLI 362
>AT5G34940.1 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
chr5:13235912-13237799 REVERSE LENGTH=401
Length = 401
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/413 (42%), Positives = 232/413 (56%), Gaps = 12/413 (2%)
Query: 130 MERWDELNQFFNETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKID 189
M RWDELN FF +TG V FGLNAL GR S+ G W TN FI++T Y ID
Sbjct: 1 MRRWDELNAFFRKTGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTID 60
Query: 190 SWELGNELSGKGIGASVAVAQYGKDVIKLKQILDVLYESSKFKPSLVAPGGFYEKEWYDK 249
WELGNEL G G+GA V QY D I L+ I++ +Y++ P ++ PGGF+E +W+ +
Sbjct: 61 GWELGNELCGSGVGARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFEVDWFTE 120
Query: 250 LLQVSGSGIINVLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTS 309
L +N + H+Y+LGPG DEHL KIL+P L + F +L I+
Sbjct: 121 YLN-KAENSLNATTRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNSSTKAV 179
Query: 310 AWVGEAGGAYNSGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXX 369
AWVGE+GGAYNSG VSN F+ SFWYLDQLG+AS Y TK YCRQ+LI
Sbjct: 180 AWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNF 239
Query: 370 XXXXXXXSALLWHRLVGKKGLAVSNDISSPFFSTFAHCSKDSVGVTLLLINLSNQTNFIL 429
SAL+W +L+G+K L + + S + HC++ S G+T+LL+NL N T +
Sbjct: 240 TPNPDYYSALIWRQLMGRKALFTTFSGTKKIRS-YTHCARQSKGITVLLMNLDNTTTVVA 298
Query: 430 NVQNPVTASAEGNAVTKSTHKGNSFFDHLKRTFSWVGTKGSEVTYREEYHLTSHDDIIRS 489
V+ + S KS KR S + + V REEYHLT+ D + S
Sbjct: 299 KVELNNSFSLRHTKHMKS----------YKRASSQLFGGPNGVIQREEYHLTAKDGNLHS 348
Query: 490 QTMVLNGIPLELTSEGNFPPLDPVRSNVLSPIYMAPLSIAFIVYPNFDAPACA 542
QTM+LNG L++ S G+ PP++P+ N PI +AP SI F+ N PACA
Sbjct: 349 QTMLLNGNALQVNSMGDLPPIEPIHINSTEPITIAPYSIVFVHMRNVVVPACA 401