Miyakogusa Predicted Gene
- Lj0g3v0146829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0146829.1 Non Chatacterized Hit- tr|B9RCW6|B9RCW6_RICCO
Heparanase, putative OS=Ricinus communis
GN=RCOM_16216,37.04,0.00000003,(Trans)glycosidases,Glycoside
hydrolase, superfamily; HEPARANASE-RELATED,NULL;
HEPARANASE-RELATED,Gl,CUFF.8967.1
(413 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07830.1 | Symbols: AtGUS2, GUS2 | glucuronidase 2 | chr5:250... 464 e-131
AT5G61250.1 | Symbols: AtGUS1, GUS1 | glucuronidase 1 | chr5:246... 454 e-128
AT5G61250.2 | Symbols: AtGUS1, GUS1 | glucuronidase 1 | chr5:246... 454 e-128
AT5G34940.2 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132... 330 9e-91
AT5G34940.3 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132... 310 2e-84
AT5G34940.1 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132... 213 2e-55
>AT5G07830.1 | Symbols: AtGUS2, GUS2 | glucuronidase 2 |
chr5:2504168-2506567 FORWARD LENGTH=543
Length = 543
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 214/377 (56%), Positives = 270/377 (71%), Gaps = 26/377 (6%)
Query: 20 EDIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAK 79
++++ S+++ GA+ ET +NF+CAT+DWWPHDKC+Y+ CPWGYSSV+N+DL+ P L K
Sbjct: 25 QEMKRASIVIQGARRVCETDENFVCATLDWWPHDKCNYDQCPWGYSSVINMDLTRPLLTK 84
Query: 80 AIQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQF 139
AI+AFKPLRIR+GGSLQDQV+YDVG+LK PC FQKM GLFGFSKGCLHM+RWDELN F
Sbjct: 85 AIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQKMNSGLFGFSKGCLHMKRWDELNSF 144
Query: 140 FNETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSG 199
TGA+VTFGLNAL GRH++ W G W N DF+ YT+SKGY IDSWE GNELSG
Sbjct: 145 LTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQDFLNYTVSKGYVIDSWEFGNELSG 204
Query: 200 KGIGASVAVAQY--------------------------APGGFYEKEWYDKLLQVSGSGI 233
G+GASV+ Y APGGFYE++WY KLL++SG +
Sbjct: 205 SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKPILVAPGGFYEQQWYTKLLEISGPSV 264
Query: 234 INVLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGA 293
++V++HH+YNLG G+D L +KI+DP LS+V F +++ TIQ+HGPW S WVGE+GGA
Sbjct: 265 VDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKTFKDVNQTIQEHGPWASPWVGESGGA 324
Query: 294 YNSGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSA 353
YNSGGR VS+TF++SFWYLDQLG+++ + TKVYCRQTL+ SA
Sbjct: 325 YNSGGRHVSDTFIDSFWYLDQLGMSARHNTKVYCRQTLVGGFYGLLEKGTFVPNPDYYSA 384
Query: 354 LLWHRLVGKKGLAVSND 370
LLWHRL+GK LAV D
Sbjct: 385 LLWHRLMGKGVLAVQTD 401
>AT5G61250.1 | Symbols: AtGUS1, GUS1 | glucuronidase 1 |
chr5:24632294-24634597 REVERSE LENGTH=539
Length = 539
Score = 454 bits (1167), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/377 (57%), Positives = 273/377 (72%), Gaps = 25/377 (6%)
Query: 21 DIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKA 80
++E +L+++G++ AET +NFICAT+DWWP +KC+Y+ CPWGY+S++NL+L+ P LAKA
Sbjct: 23 NMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLLAKA 82
Query: 81 IQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFF 140
IQAF+ LRIR+GGSLQDQV+YDVG LK PC F+K GLFGFS+GCL+M+RWDE+N FF
Sbjct: 83 IQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLFGFSEGCLYMKRWDEVNHFF 142
Query: 141 NETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGK 200
N TGAIVTFGLNALHGR++++ W G W TN DF+ YT+SKGY IDSWE GNELSG
Sbjct: 143 NATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYTVSKGYAIDSWEFGNELSGS 202
Query: 201 GIGASVAVAQY-------------------------APGGFYEKEWYDKLLQVSGSGIIN 235
GI ASV+V Y APGGF+E++WY +LL++SG G+++
Sbjct: 203 GIWASVSVELYGKDLIVLKNVIKNVYKNSRTKPLVVAPGGFFEEQWYSELLRLSGPGVLD 262
Query: 236 VLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYN 295
VL+HH+YNLGPG+D L KILDP LS + +F+N++ TIQ+HGPW +AWVGEAGGA+N
Sbjct: 263 VLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQTIQEHGPWAAAWVGEAGGAFN 322
Query: 296 SGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSALL 355
SGGR VS TF+NSFWYLDQLGI+S + TKVYCRQ L+ SALL
Sbjct: 323 SGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGFYGLLEKETFVPNPDYYSALL 382
Query: 356 WHRLVGKKGLAVSNDIS 372
WHRL+GK L V S
Sbjct: 383 WHRLMGKGILGVQTTAS 399
>AT5G61250.2 | Symbols: AtGUS1, GUS1 | glucuronidase 1 |
chr5:24632294-24634597 REVERSE LENGTH=539
Length = 539
Score = 454 bits (1167), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/377 (57%), Positives = 273/377 (72%), Gaps = 25/377 (6%)
Query: 21 DIEHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKA 80
++E +L+++G++ AET +NFICAT+DWWP +KC+Y+ CPWGY+S++NL+L+ P LAKA
Sbjct: 23 NMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLLAKA 82
Query: 81 IQAFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFF 140
IQAF+ LRIR+GGSLQDQV+YDVG LK PC F+K GLFGFS+GCL+M+RWDE+N FF
Sbjct: 83 IQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLFGFSEGCLYMKRWDEVNHFF 142
Query: 141 NETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGK 200
N TGAIVTFGLNALHGR++++ W G W TN DF+ YT+SKGY IDSWE GNELSG
Sbjct: 143 NATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYTVSKGYAIDSWEFGNELSGS 202
Query: 201 GIGASVAVAQY-------------------------APGGFYEKEWYDKLLQVSGSGIIN 235
GI ASV+V Y APGGF+E++WY +LL++SG G+++
Sbjct: 203 GIWASVSVELYGKDLIVLKNVIKNVYKNSRTKPLVVAPGGFFEEQWYSELLRLSGPGVLD 262
Query: 236 VLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYN 295
VL+HH+YNLGPG+D L KILDP LS + +F+N++ TIQ+HGPW +AWVGEAGGA+N
Sbjct: 263 VLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQTIQEHGPWAAAWVGEAGGAFN 322
Query: 296 SGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSALL 355
SGGR VS TF+NSFWYLDQLGI+S + TKVYCRQ L+ SALL
Sbjct: 323 SGGRQVSETFINSFWYLDQLGISSKHNTKVYCRQALVGGFYGLLEKETFVPNPDYYSALL 382
Query: 356 WHRLVGKKGLAVSNDIS 372
WHRL+GK L V S
Sbjct: 383 WHRLMGKGILGVQTTAS 399
>AT5G34940.2 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
chr5:13235912-13238718 REVERSE LENGTH=536
Length = 536
Score = 330 bits (847), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 215/368 (58%), Gaps = 26/368 (7%)
Query: 23 EHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKAIQ 82
E+G++ V G A ++FICAT+DWWP +KCDY C W ++S++NLDL++ L AI+
Sbjct: 29 ENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLNNVILQNAIK 88
Query: 83 AFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFFNE 142
AF PL+IR+GG+LQD V+Y+ K PC F K LFG+++GCL M RWDELN FF +
Sbjct: 89 AFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFGYTQGCLPMRRWDELNAFFRK 148
Query: 143 TGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGKGI 202
TG V FGLNAL GR S+ G W TN FI++T Y ID WELGNEL G G+
Sbjct: 149 TGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWELGNELCGSGV 208
Query: 203 GASVAVAQYA-------------------------PGGFYEKEWYDKLLQVSGSGIINVL 237
GA V QYA PGGF+E +W+ + L +N
Sbjct: 209 GARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFEVDWFTEYLN-KAENSLNAT 267
Query: 238 SHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYNSG 297
+ H+Y+LGPG DEHL KIL+P L + F +L I+ AWVGE+GGAYNSG
Sbjct: 268 TRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNSSTKAVAWVGESGGAYNSG 327
Query: 298 GRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXXXXXXXXXSALLWH 357
VSN F+ SFWYLDQLG+AS Y TK YCRQ+LI SAL+W
Sbjct: 328 RNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALIWR 387
Query: 358 RLVGKKGL 365
+L+G+K L
Sbjct: 388 QLMGRKAL 395
>AT5G34940.3 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
chr5:13236566-13238718 REVERSE LENGTH=382
Length = 382
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 200/335 (59%), Gaps = 26/335 (7%)
Query: 23 EHGSLLVNGAQAKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKAIQ 82
E+G++ V G A ++FICAT+DWWP +KCDY C W ++S++NLDL+
Sbjct: 29 ENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLTIVVPISKNT 88
Query: 83 AFKPLRIRLGGSLQDQVLYDVGSLKYPCHLFQKMKGGLFGFSKGCLHMERWDELNQFFNE 142
AF PL+IR+GG+LQD V+Y+ K PC F K LFG+++GCL M RWDELN FF +
Sbjct: 89 AFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFGYTQGCLPMRRWDELNAFFRK 148
Query: 143 TGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKIDSWELGNELSGKGI 202
TG V FGLNAL GR S+ G W TN FI++T Y ID WELGNEL G G+
Sbjct: 149 TGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTIDGWELGNELCGSGV 208
Query: 203 GASVAVAQYA-------------------------PGGFYEKEWYDKLLQVSGSGIINVL 237
GA V QYA PGGF+E +W+ + L + + +N
Sbjct: 209 GARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFEVDWFTEYLNKAENS-LNAT 267
Query: 238 SHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTSAWVGEAGGAYNSG 297
+ H+Y+LGPG DEHL KIL+P L + F +L I+ AWVGE+GGAYNSG
Sbjct: 268 TRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNSSTKAVAWVGESGGAYNSG 327
Query: 298 GRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLI 332
VSN F+ SFWYLDQLG+AS Y TK YCRQ+LI
Sbjct: 328 RNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLI 362
>AT5G34940.1 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
chr5:13235912-13237799 REVERSE LENGTH=401
Length = 401
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 143/261 (54%), Gaps = 26/261 (9%)
Query: 130 MERWDELNQFFNETGAIVTFGLNALHGRHQISHNVWEGTWVPTNPYDFIKYTISKGYKID 189
M RWDELN FF +TG V FGLNAL GR S+ G W TN FI++T Y ID
Sbjct: 1 MRRWDELNAFFRKTGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTAENNYTID 60
Query: 190 SWELGNELSGKGIGASVAVAQYA-------------------------PGGFYEKEWYDK 224
WELGNEL G G+GA V QYA PGGF+E +W+ +
Sbjct: 61 GWELGNELCGSGVGARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGFFEVDWFTE 120
Query: 225 LLQVSGSGIINVLSHHLYNLGPGSDEHLERKILDPERLSKVENIFSNLSATIQKHGPWTS 284
L + + + N + H+Y+LGPG DEHL KIL+P L + F +L I+
Sbjct: 121 YLNKAENSL-NATTRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNIIKNSSTKAV 179
Query: 285 AWVGEAGGAYNSGGRFVSNTFLNSFWYLDQLGIASSYGTKVYCRQTLIXXXXXXXXXXXX 344
AWVGE+GGAYNSG VSN F+ SFWYLDQLG+AS Y TK YCRQ+LI
Sbjct: 180 AWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASLYDTKTYCRQSLIGGNYGLLNTTNF 239
Query: 345 XXXXXXXSALLWHRLVGKKGL 365
SAL+W +L+G+K L
Sbjct: 240 TPNPDYYSALIWRQLMGRKAL 260