Miyakogusa Predicted Gene

Lj0g3v0146819.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146819.2 tr|Q6X9T2|Q6X9T2_HORVD SNAP25-like protein C
(Fragment) OS=Hordeum vulgare var. distichum PE=4
SV=1,49.52,0.000000000000002,SNARE,Target SNARE coiled-coil domain;
SUBFAMILY NOT NAMED,NULL; SYNAPTOSOMAL ASSOCIATED
PROTEIN,NUL,CUFF.8965.2
         (302 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61210.1 | Symbols: SNAP33, ATSNAP33, SNP33, ATSNAP33B | solu...   322   3e-88
AT1G13890.1 | Symbols: SNAP30, ATSNAP30 | soluble N-ethylmaleimi...   287   6e-78
AT5G07880.1 | Symbols: SNAP29, ATSNAP29 | synaptosomal-associate...   239   2e-63

>AT5G61210.1 | Symbols: SNAP33, ATSNAP33, SNP33, ATSNAP33B | soluble
           N-ethylmaleimide-sensitive factor adaptor protein 33 |
           chr5:24624027-24625366 FORWARD LENGTH=300
          Length = 300

 Score =  322 bits (824), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 172/302 (56%), Positives = 213/302 (70%), Gaps = 6/302 (1%)

Query: 1   MVGSKKSPLKYAKPSSVDPVSKHKNPFDSDEETKDNKKHVSGHGLVSRESN----TNPFD 56
           M G +KSP    K +SVD  S   NPFDSD+E+ DNK  ++     + E +    TNPF 
Sbjct: 1   MFGLRKSPANLPKHNSVDLKSSKPNPFDSDDES-DNKHTLNPSKRTTSEPSLADMTNPFG 59

Query: 57  DDYXXXXXXXXXXXXXXXNNPNRYKNGFRDSGGLESQSVQELENYAVYKSEETTKSVNNC 116
            +                N+  +YKN FRDSGG+E+QSVQELE YAVYK+EETTKSV  C
Sbjct: 60  GERVQKGDSSSSKQSLFSNSKYQYKNNFRDSGGIENQSVQELEGYAVYKAEETTKSVQGC 119

Query: 117 LKIAEEIREDATNTLVMLHQQGEQITRSHDVAADIDHDLSRGEKLLGSLGGMFSRTWKPK 176
           LK+AE+IR DAT TLVMLH QGEQITR+H  A +IDHDLSRGEKLLGSLGGMFS+TWKPK
Sbjct: 120 LKVAEDIRSDATRTLVMLHDQGEQITRTHHKAVEIDHDLSRGEKLLGSLGGMFSKTWKPK 179

Query: 177 KTGTITGPVIFGADPVRRNGNHSEQREKLGLTSSAPKGQSKPRKSLSEPTNAFEKVEVEK 236
           KT  I GPV+   D   R  NH E+REKLGL +SAP+GQS+ R+ L E  +A+++VE+EK
Sbjct: 180 KTRPINGPVVTRDDSPTRRVNHLEKREKLGL-NSAPRGQSRTREPLPESADAYQRVEMEK 238

Query: 237 GKQDDALSDISDLLGELKGMAMDMGSEIDRHINAMDGFDKDVEKLSIRMNGANQRGRHLL 296
            KQDD LSD+SD+LGELK MA+DMGSEI++    +D    DV++L+ R+  +NQRGR LL
Sbjct: 239 AKQDDGLSDLSDILGELKNMAVDMGSEIEKQNKGLDHLHDDVDELNFRVQQSNQRGRRLL 298

Query: 297 GK 298
           GK
Sbjct: 299 GK 300


>AT1G13890.1 | Symbols: SNAP30, ATSNAP30 | soluble
           N-ethylmaleimide-sensitive factor adaptor protein 30 |
           chr1:4751581-4752844 FORWARD LENGTH=263
          Length = 263

 Score =  287 bits (734), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 140/221 (63%), Positives = 173/221 (78%), Gaps = 3/221 (1%)

Query: 78  NRYKNGFRDSGGLESQSVQELENYAVYKSEETTKSVNNCLKIAEEIREDATNTLVMLHQQ 137
           ++YKNGF DSGGL+SQ+ +ELE YAVYK+EETTK VNNCLKIAE+IR D   TL MLHQQ
Sbjct: 46  DKYKNGFNDSGGLQSQTTEELEKYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEMLHQQ 105

Query: 138 GEQITRSHDVAADIDHDLSRGEKLLGSLGGMFSRTWKPKKTGTITGPVIFGADPVRRNGN 197
           GEQI R+H++A D+D DLSRGEKLL +LGGMFS+ WKPKKT  ITGP+I    P +++ N
Sbjct: 106 GEQINRTHEMAVDMDKDLSRGEKLLNNLGGMFSKPWKPKKTKNITGPMITPDKPSKKSEN 165

Query: 198 HSEQREKLGLTSSAPKGQSKPRKSLSEPTNAFEKVEVEKGKQDDALSDISDLLGELKGMA 257
           H E+REKLGL     KG+S  + +L +PTNA +KVE EK KQDD LSD+SD+LG+LK MA
Sbjct: 166 HKEEREKLGL---GAKGRSSSQPALDQPTNALQKVEQEKAKQDDGLSDLSDILGDLKSMA 222

Query: 258 MDMGSEIDRHINAMDGFDKDVEKLSIRMNGANQRGRHLLGK 298
           +DMGSEID+   A+D    DV++L+ R+ GANQR RHLL K
Sbjct: 223 VDMGSEIDKQNKALDHLGDDVDELNSRVQGANQRARHLLSK 263


>AT5G07880.1 | Symbols: SNAP29, ATSNAP29 | synaptosomal-associated
           protein SNAP25-like 29 | chr5:2515587-2516694 REVERSE
           LENGTH=251
          Length = 251

 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/258 (48%), Positives = 173/258 (67%), Gaps = 11/258 (4%)

Query: 45  LVSRESNTNPFDDDYXXXXXXXXXXXXXXXNNP---NRYKNGFRDSGGLESQSVQELENY 101
           +  + S+ NPFDD+                ++     R+ +  + SGG E+Q+VQELE+Y
Sbjct: 1   MAPKNSSWNPFDDEKEAAKSFSLNPFDDDDDDKEVEKRFTSSLKPSGGKENQTVQELESY 60

Query: 102 AVYKSEETTKSVNNCLKIAEEIREDATNTLVMLHQQGEQITRSHDVAADIDHDLSRGEKL 161
           AVY SEETTK+V  CLK+AEEIR DA+ TLVML++QG+QITR+H    D+DH LSRGEK+
Sbjct: 61  AVYNSEETTKTVQGCLKVAEEIRCDASKTLVMLNEQGDQITRTHQKTVDLDHHLSRGEKI 120

Query: 162 LGSLGGMFSRTWKPKKTGTITGPVIFGADPVRRNGNHSEQREKLGLTSSAPKGQSKPR-K 220
           LG LGG+FSRTWKPKK+ +ITGPVI   D  +R     + REKLGL  S      KP+ K
Sbjct: 121 LGRLGGVFSRTWKPKKSRSITGPVITKGDSPKRKVIDLKTREKLGLNPSL-----KPKSK 175

Query: 221 SLSEPTNAFEKVEVEKGKQDDALSDISDLLGELKGMAMDMGSEIDRHINAMDGFDKDVEK 280
           +L E  +A++K ++   KQD+AL+D+S LLGELK MA+DMG+ I+R  N +D    + ++
Sbjct: 176 TLPEAVDAYQKTQI--AKQDEALTDLSALLGELKNMAVDMGTAIERQTNELDHLQDNADE 233

Query: 281 LSIRMNGANQRGRHLLGK 298
           L+ R+  +NQR R+LL K
Sbjct: 234 LNYRVKQSNQRARYLLRK 251