Miyakogusa Predicted Gene

Lj0g3v0146809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146809.1 Non Chatacterized Hit- tr|I1KWC9|I1KWC9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,33.48,1e-18,U1-like
zinc finger,Zinc finger, U1-type; zinc finger,Zinc finger, C2H2-like;
zf-met,NULL; ZINC FING,CUFF.8957.1
         (388 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61190.1 | Symbols:  | putative endonuclease or glycosyl hydr...    99   6e-21

>AT5G61190.1 | Symbols:  | putative endonuclease or glycosyl
           hydrolase with C2H2-type zinc finger domain |
           chr5:24615480-24619886 FORWARD LENGTH=995
          Length = 995

 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 96/194 (49%), Gaps = 22/194 (11%)

Query: 193 RKDL---SGGTPMDSVKICTVCNVMCNSEDTYSKHLAGKRHTAQVGLMNNNGIGPSVAAF 249
           RK++   S G   +S   C +CNV+C+S + ++ HL+  RH +Q  ++ +     SV+A 
Sbjct: 227 RKNMLQHSSGATGESATTCRICNVVCDSFEKFTAHLSDIRHISQAAIVESRRAQASVSA- 285

Query: 250 KRRKAPKKIQVAQSAWCEVCKITCDTKDMYIIHLSGKKHLKNLEKLSKPETGVGASAAPA 309
              K   +  + +   C+VC+I+    D Y  H  GKKH  NLE           S    
Sbjct: 286 ---KPIHQAVLVEPLLCKVCQISFTNNDTYKNHTYGKKHRNNLEL---------QSGKSK 333

Query: 310 NPIIGPLEKPGSDKPRKAPEMDIETKKRKIVEGGAAEAAVRLCDLCNVVCNSEKVFNTHL 369
           N ++GP E      P K         K+ ++E  A   A  +C +CNVVC S+ VFN+HL
Sbjct: 334 NILVGPAE------PSKEVLEKHNMNKKVMIESRAQANAEFVCLMCNVVCQSQIVFNSHL 387

Query: 370 VGHKHAAMVKKKQA 383
            G KHA M+ + +A
Sbjct: 388 RGKKHANMLSQSEA 401



 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 28/198 (14%)

Query: 207 ICTVCNVMCNSEDTYSKHLAGKRHT----AQVGLMNNNGIGP---SVAAFKRRKAPKKIQ 259
           +C VC +   + DTY  H  GK+H      Q G   N  +GP   S    ++    KK+ 
Sbjct: 298 LCKVCQISFTNNDTYKNHTYGKKHRNNLELQSGKSKNILVGPAEPSKEVLEKHNMNKKVM 357

Query: 260 VAQSAW------CEVCKITCDTKDMYIIHLSGKKHLKNLEKLSK-------PETGVGASA 306
           +   A       C +C + C ++ ++  HL GKKH   L +           E GVG   
Sbjct: 358 IESRAQANAEFVCLMCNVVCQSQIVFNSHLRGKKHANMLSQSEALIVSTKLQEKGVGEKE 417

Query: 307 APANPII-------GPLEKPGSDKPRKAPEMDIETKKR-KIVEGGAAEAAVRLCDLCNVV 358
            P+  +           EK      +K PE   E K + K +      +A  +C +CNV 
Sbjct: 418 QPSETVAELQLQSQKAQEKQVLVDSKKLPEKGDEVKGQPKEMTALRNASAKYICRMCNVG 477

Query: 359 CNSEKVFNTHLVGHKHAA 376
           C+S  VF THL G KHAA
Sbjct: 478 CHSPIVFETHLRGQKHAA 495



 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 100/262 (38%), Gaps = 80/262 (30%)

Query: 113 HKTKVTKAMQCEVCKIDCNTADVYEKHILGKKHKKNLQVWNNPTTALLPGPSHANVQ--- 169
           H+  + + + C+VC+I     D Y+ H  GKKH+ NL++ +  +  +L GP+  + +   
Sbjct: 289 HQAVLVEPLLCKVCQISFTNNDTYKNHTYGKKHRNNLELQSGKSKNILVGPAEPSKEVLE 348

Query: 170 ----SSTSGIQGQVQVGAEGEELESKKRKDLSGGTPMDSVKICTVCNVMCNSEDTYSKHL 225
               +    I+ + Q  AE                      +C +CNV+C S+  ++ HL
Sbjct: 349 KHNMNKKVMIESRAQANAEF---------------------VCLMCNVVCQSQIVFNSHL 387

Query: 226 AGKRHTAQVGL---------MNNNGIG----PSVAA----FKRRKA-------------- 254
            GK+H   +           +   G+G    PS        + +KA              
Sbjct: 388 RGKKHANMLSQSEALIVSTKLQEKGVGEKEQPSETVAELQLQSQKAQEKQVLVDSKKLPE 447

Query: 255 --------PKKIQVAQSA----WCEVCKITCDTKDMYIIHLSGKKHLKNLEKLSK----- 297
                   PK++   ++A     C +C + C +  ++  HL G+KH  NL +        
Sbjct: 448 KGDEVKGQPKEMTALRNASAKYICRMCNVGCHSPIVFETHLRGQKHAANLNQSKDQALID 507

Query: 298 ----PETGVGASAAPANPIIGP 315
                E G G    P   I+ P
Sbjct: 508 SKKLQEKGFGEKEQPRETIVEP 529