Miyakogusa Predicted Gene
- Lj0g3v0146689.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0146689.1 Non Chatacterized Hit- tr|F6HPD4|F6HPD4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.93,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopept,CUFF.8946.1
(102 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-18
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 86 5e-18
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-15
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 77 3e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-14
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-14
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 70 2e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-13
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-13
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 69 9e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-12
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 67 2e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 67 3e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-12
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-12
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-12
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 5e-12
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-12
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-11
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 65 1e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 64 3e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 64 3e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 63 3e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 63 4e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-11
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-11
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-11
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-11
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-10
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 61 2e-10
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-10
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 60 3e-10
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 60 3e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-10
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-10
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-10
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-10
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-10
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 58 1e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 58 1e-09
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 58 1e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-09
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 57 3e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-09
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 56 4e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-09
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 55 7e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-09
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 55 9e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 55 1e-08
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-08
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-08
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 53 4e-08
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-08
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-07
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 50 3e-07
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 50 3e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 49 5e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 49 6e-07
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 49 8e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 1e-06
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 2e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 2e-06
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 47 3e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 45 8e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 45 9e-06
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 87.4 bits (215), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 59/94 (62%)
Query: 9 STSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIF 68
+ ST+L A D + +S H CI+IGL L+++TALI MY K G + R+IF
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 69 DGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
D + KDVV WNC+I YA+ GL+ E V+LL+QM
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM 319
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + ++ ++ST + L + + VG+++ + ++ + TAL+DMYAK+GL
Sbjct: 319 MKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGL 378
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +IF+ + DKDV W +I Y +GL EAV L +M
Sbjct: 379 LEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 85.9 bits (211), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
MC L+ S T++ + PA VGK +HGY ++ G S +N+ TAL+DMYAK G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R++FDG+++++VV WN +I Y +N EA+ + Q+M
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 51/87 (58%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
L GD VGK +HG ++ G S L +T L +MYAK V+ RK+FD + ++D
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
+V WN ++ Y++NG+ A+ +++ M
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSM 227
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
K +HG ++ L ++ V TAL+DMYAK G + R IFD + ++ V WN +I Y
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 89 NGLVGEAVYLLQQM 102
+G A+ L ++M
Sbjct: 517 HGFGKAALELFEEM 530
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 51/98 (52%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G++ + +V+ A D + G+ +H +++GL +++V+ +LI MY K V
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F L + +V WN +I +A+NG +A+ QM
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GL + ST++ +FPA G GK++HGYC ++G S+ L V T ++D+YAK + +
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++FD K+ V W+ +IG Y N ++ EA + QM
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG+R +T+L + A G S HGYC+ G + + ++ AL+DMY K G
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +++FD + +D+V WN ++ + +GL EA+ L M
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG+R + T + A GK +H + ++ + V TAL+D YAK G
Sbjct: 94 MLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE 153
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ K+FD + +D+V WN +I ++ + + + + L M
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM 195
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 77.0 bits (188), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
L+ T+ L AA T N +GK + YCI+ S + + + ++DMYAK G + +
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD V+KD++LWN L+ YA +GL GEA+ L M
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+ + TV A+ + GK H I G+ + T+L++ Y K+GL+ +
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+FD + +KDVV WN +I Y + GLV +A+Y+ Q M
Sbjct: 329 EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ +HGY ++ GL + V ++L DMY K G++ K+FD + D++ V WN L+ Y +
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ L M
Sbjct: 252 NGKNEEAIRLFSDM 265
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQ-IGLSSHLNVLTALIDMYAKIGLVH 62
SGLR + ++ + A + +G+++HGY I+ + SS +++ T+L+DMYAK G ++
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDIN 599
Query: 63 WGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+F + ++ L N +I YA G + EA+ L + +
Sbjct: 600 KAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 74.7 bits (182), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 58/99 (58%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+G+ + T+L L P +G+SLHG C++ GL S + VL + I MY K G V
Sbjct: 150 TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEA 209
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
GR++FD + K ++ WN +I Y++NGL + + L +QM
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDG--LVDKDVVLWNCLIG 84
V G+ LH + + G + VLTALI MY K GLV RK+F+ + V +N LI
Sbjct: 70 VSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 85 NYARNGLVGEAVYLLQQM 102
Y N V +A Y+ ++M
Sbjct: 130 GYTANSKVTDAAYMFRRM 147
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +G++ S T++ + A D GK LH + +++G HL TAL+DMYAK G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ RK FD L ++DV LW LI Y +N EA+ L ++M
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
L TST+L N V G+++HG I+ G S+ + L++ YAK G +
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQ 100
IF+ ++ KDVV WN LI Y++NG + + ++Q
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQ 104
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +G+ + T+ + A +GK +HG+ I+ G + + +AL MY+K G
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ G +F +KDVV WN +I + NG EA+ L ++M
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
+F A + VG+ H +++ + V T+L+ MY K GLV G K+F + +++
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 76 VVLWNCLIGNYARNGLVGEAVYLL 99
W+ ++ YA G V EA+ +
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVF 207
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ +H I+ GL + + AL+ MY+K ++ K+FD D++ + W+ ++ Y+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 88 RNGLVGEAVYLLQQM 102
+NG EAV L +M
Sbjct: 299 QNGESLEAVKLFSRM 313
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 64/102 (62%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +SG +A ST++ L + F G+ +HGY +++GL S++++ +LI MY++ G
Sbjct: 80 MQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK 139
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ RK+F+ + D+++ WN ++ +Y + G V +A+ LL +M
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +GL+ STS++ L A + + +GK++HGY ++ L + V T LIDMY K G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + R +FD + K++V WN L+ + L+ +A L+ +M
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRM 317
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HG+C++ L V TAL+DMY K G + +IF G+ +K + WNC++ YA
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 474
Query: 89 NGLVGEAV 96
G E +
Sbjct: 475 FGRGEEGI 482
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 72.8 bits (177), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG R +ST++ L P +G + ++ ++HGYC++ SH +V TAL +Y+K+ +
Sbjct: 316 SGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+FD +K + WN +I Y +NGL +A+ L ++M
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S R T+T+L + PA + +G +H + G SH VLT I +Y+K G +
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G +F D+V +N +I Y NG ++ L +++
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Score = 55.1 bits (131), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+ L+ ++ST AA + G+ +HG + G S L + + ++ MY K V
Sbjct: 113 TDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVED 172
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+FD + +KD +LWN +I Y +N + E++ + + +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T+ + A +GK +H S + V TALI MYAK G + R++FD +
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+ V WN +I Y +G EA+ + +M
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G R S + LF A T GK +H Y I+ G L+DMYAK G
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+H RKIFD L +DVV WN L+ YA++G EAV+ ++M
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Score = 62.8 bits (151), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G LHG+C++ G S+++V +AL+D+Y + GL+ + +FD L ++ V WN LI +AR
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 89 NGLVGEAVYLLQQM 102
+A+ L Q M
Sbjct: 240 RSGTEKALELFQGM 253
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
+ G+ +H + +Q + + L++MYAK G + RK+F+ + +D V W LI
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 86 YARNGLVGEAVYLLQQM 102
Y+++ +A+ QM
Sbjct: 136 YSQHDRPCDALLFFNQM 152
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
L+ ++ T++ + P+ GK +H Y I+ L++ + V +AL+DMYAK G + R
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD + K+V+ WN +I Y +G EA+ LL+ M
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYAKIG 59
M G+ T+ + PA GK LH Y ++ G L + V +AL+DMY
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V GR++FDG+ D+ + LWN +I Y++N EA+ L M
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 57/99 (57%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+GL A+++T+ + PA + F +++HG+ ++ GL V L+DMY+++G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+IF + D+D+V WN +I Y + +A+ LL +M
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL--VD 73
L A D W GK +HG+ I+ + VLT+LIDMY K GL W R+IFD
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 74 KDVVLWNCLIGNYARNGLVGEAVYLLQ 100
KD V WN +I Y ++G A+ + +
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFE 460
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 69.3 bits (168), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +SGL+ T +F A VG+S+H ++GL +++ +LI MYAK G
Sbjct: 123 MKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ 182
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V + RK+FD + ++D V WN +I Y+ G +A+ L ++M
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM 224
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+G+ T+ + A G +GK + + ++ L ++ V T L+DMY K G V
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++F+ + K+ WN +I YA G EA+ L +M
Sbjct: 388 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCI--QIGLSSHLNVLTALIDMYAKIGLVH 62
G T++ + A + G+ L I +IGLS+ L + LI MY K G +
Sbjct: 228 GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLG--SKLISMYGKCGDLD 285
Query: 63 WGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++F+ ++ KD V W +I Y++NG EA L +M
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + L T T L A G S+H + G SS + ++L+++YAK GL
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL 96
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ RK+F+ + ++DVV W +IG Y+R G+VGEA L+ +M
Sbjct: 97 LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM 138
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG S+ + + + +F +G S+HGY ++ G + L +LI MYAK G
Sbjct: 337 MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGH 396
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ IF+ + ++D+V WN +I YA+N + +A+ L ++M
Sbjct: 397 LDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GLR T +G + +G+ LH ++ G +++ TALI MY K G
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++ + + +KDVV W +I R G +A+ + +M
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
TV+ L A VGK +H I+ + V TAL+DMY+K G + ++ FD +
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 72 VDKDVVLWNCLIGNYARNG 90
KDVV W LI Y +G
Sbjct: 510 SWKDVVSWGILIAGYGFHG 528
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARN 89
+ LH + + G + V+ +++++Y K V + +FD + +D+V WN +I YA
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 90 GLVGEAVYLLQQM 102
G + E + LL +M
Sbjct: 224 GNMSEILKLLYRM 236
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 68.6 bits (166), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 50/74 (67%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HGY ++ GL S L V++AL+ MY + G + G+++FD + D+DVV WN LI +Y
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 89 NGLVGEAVYLLQQM 102
+G +A+ + ++M
Sbjct: 364 HGYGKKAIQIFEEM 377
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +H + + G SSH+ ++T L+DMYA+ G V + +F G+ ++VV W+ +I YA+
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ ++M
Sbjct: 261 NGKAFEALRTFREM 274
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
L A+GD + +G+S+HGY + GL ++ V T+L+DMYAK+G + ++F ++ K
Sbjct: 223 LLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT 282
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
V W LI +A+NGL +A + +M
Sbjct: 283 AVSWGSLISGFAQNGLANKAFEAVVEM 309
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G + T++ + A + G+ +H Y ++ + + TAL+DMY+K G +
Sbjct: 313 GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSKCGALSSS 371
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R+IF+ + KD+V WN +I Y +G E V L +M
Sbjct: 372 REIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKM 409
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G++ T++ L A +GK +H Y I++GL+ +L+ L+D+YA+ G V
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +FD +VDK+ V W LI A NG EA+ L + M
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+++H I+ G S + V +L+ +YA G V K+FD + +KD+V WN +I +A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 88 RNGLVGEAVYLLQQM 102
NG EA+ L +M
Sbjct: 66 ENGKPEEALALYTEM 80
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G++ T++ L A +GK +H Y I++GL+ +L+ L+D+YA+ G V
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +FD +VDK+ V W LI A NG EA+ L + M
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 4 SGL-RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVH 62
SGL T T L A + +G+++H I+ G S + V +L+ +YA G V
Sbjct: 114 SGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA 173
Query: 63 WGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD + +KD+V WN +I +A NG EA+ L +M
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+GL+ T + L PA+ + G+++HGY ++ G H+ + TALIDMY + G +
Sbjct: 328 NGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
IFD + +K+V+ WN +I Y +NG A+ L Q++
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSS-HLNVLTALIDMYAKIG 59
M G + + + A ++ +GK +H + ++ + + + V+T+++DMY+K G
Sbjct: 222 MLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYG 281
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V + +IF+G++ +++V WN +IG YARNG V +A Q+M
Sbjct: 282 EVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S L ++T+ + PA ++ + G+ +H Y ++ S+ +L +L+ MYA G +
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLED 484
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK F+ ++ KDVV WN +I YA +G +V+L +M
Sbjct: 485 ARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M ++G++A T T + + + GK +H I++G S + V +LI +Y K+G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+F+ + ++D+V WN +I Y G ++ L ++M
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM 222
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 67.0 bits (162), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
TV + PA F G+ +HGY ++ G S +V +L+DMYAK G + +FD +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
KD+V W +I Y +G EA+ L QM
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG+ +T++ +F D+ +G+++H ++ S L+DMY+K G
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + +F + D+ VV + +I YAR GL GEAV L ++M
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ LHG+ ++ G +V +L+ Y K V RK+FD + ++DV+ WN +I Y
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 89 NGLVGEAVYLLQQM 102
NGL + + + QM
Sbjct: 274 NGLAEKGLSVFVQM 287
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +H + + L + V AL+DMYAK G + +F + KD++ WN +IG Y++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 89 NGLVGEAVYLL 99
N EA+ L
Sbjct: 476 NCYANEALSLF 486
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 57/102 (55%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + L+ + T+ + P + + + GK +HGY I+ G+ S + + ++L+DMYAK
Sbjct: 233 MGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 292
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++F L +D + WN L+ Y +NG EA+ L +QM
Sbjct: 293 IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
+ PA +GK LHGY ++ G S++ + +AL+DMY+K G + RKIFD + D
Sbjct: 349 VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLD 408
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
V W +I +A +G EAV L ++M
Sbjct: 409 EVSWTAIIMGHALHGHGHEAVSLFEEM 435
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 4 SGLRASTS-TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVH 62
+GLRA S TV+ L A + +F G ++H Y I+ GL S L V LID+YA+ G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 63 WGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+K+FD + +D++ WN +I Y N A+ L Q+M
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 30 KSLHGYCIQIG-LSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
+S+ G+ ++ G + + A++ MYAK+GLV R +F+ L + DV+ WN +I YA+
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ + M
Sbjct: 428 NGFASEAIEMYNIM 441
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G ++ + PA GDT +GK +HGY + L +L + ALIDMYAK G +
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +F+ + +DVV W +I Y +G +AV L ++
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
MC +R T + A + V+G+ +HG ++GLSS L V L+ MY K G
Sbjct: 131 MCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 190
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R + D + +DVV WN L+ YA+N +A+ + ++M
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 22 DTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNC 81
D+ N G LH ++ GL S T+L+ Y K GL+ R++F+ ++D+D+VLWN
Sbjct: 154 DSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNA 213
Query: 82 LIGNYARNGLVGEAVYLLQQM 102
L+ +Y NG++ EA LL+ M
Sbjct: 214 LVSSYVLNGMIDEAFGLLKLM 234
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +H ++ + V TAL++MYAK + R+ F+ +V ++VV WN +I +A+
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ L QM
Sbjct: 320 NGEGREAMRLFGQM 333
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +S ++ T+L L PA + + + +HG ++ L + V AL D YAK G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + R IF G+ KD++ WN LIG Y +G G A+ L QM
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +H +++G + V +L+DMY+K G + RK+FD + +KDV WN +I Y +
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQ 430
Query: 89 NGLVGEAVYLLQQM 102
G G+A L +M
Sbjct: 431 AGYCGKAYELFTRM 444
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 47/74 (63%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +H I++G+SS L V +++ +YAK G + + K F + ++DV+ WN ++ Y +
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 89 NGLVGEAVYLLQQM 102
NG EAV L+++M
Sbjct: 260 NGKHEEAVELVKEM 273
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYAKIGLVH 62
G + ST L L + D+ + +G+ LH + GL + +V T L+ MYAK G +
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIA 132
Query: 63 WGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+FD + ++++ W+ +IG Y+R E L + M
Sbjct: 133 DARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 3 WSGLRASTS-----TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAK 57
+S +R STS T L A + G+S+H + +GL S+L++ +LI MY K
Sbjct: 209 YSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCK 268
Query: 58 IGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G + +IFD +KDVV WN +I YA++GL +A+ L + M
Sbjct: 269 CGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGL--SSHLNVLTALIDMYAKIGLVHWGRKIFD 69
TV LF A + VG SLH Y +++G SS ++V TAL+D YAK G R IFD
Sbjct: 445 TVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD 504
Query: 70 GLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +K+ + W+ +IG Y + G ++ L ++M
Sbjct: 505 TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEM 537
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
++ + T+ + G N +G+S+HG I++G+ NV AL+ MYAK +
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAK 397
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F+ +KD+V WN +I +++NG + EA++L +M
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK HG ++ G+ ++T+L+DMY K G + R++F+ D+V+W +I Y
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTH 320
Query: 89 NGLVGEAVYLLQQM 102
NG V EA+ L Q+M
Sbjct: 321 NGSVNEALSLFQKM 334
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 29 GKSLHGYCIQIGLSSHLNV-LTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
GK +H C + + S NV LT L+DMYAK G + K+F+ + ++VV W +I Y
Sbjct: 161 GKKIH--CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218
Query: 88 RNGLVGEAVYLLQQM 102
+N L E + L +M
Sbjct: 219 KNDLCEEGLVLFNRM 233
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 56/98 (57%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GL ST + A G+ GK +HG I G+ S++ V ++L+DMY K G V
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++F+G+ K+ V W+ L+G Y +NG +A+ + ++M
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GK +HG ++ G ++ V +ALID+Y K G + +++ + ++++ WN ++ A
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALA 439
Query: 88 RNGLVGEAVYLLQQM 102
+NG EAV M
Sbjct: 440 QNGRGEEAVSFFNDM 454
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 7 RASTSTVLILFPAA---GDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+ S+ T I+ P GD++N GKS+H Y I+ GL V AL+ MYAK G +
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYN---GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFP 175
Query: 64 -GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEA 95
FDG+ DKDVV WN +I ++ N ++ +A
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADA 208
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+R +T T++ L P + + + HGY I+ GL + + L+D+YAK G +
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHA 621
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F +D+V++ ++ YA +G EA+ + M
Sbjct: 622 YSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM 659
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 30 KSLHGYCIQIGL---SSHLNVLTALIDMYAKIGLVHWGRKIFDGLVD-KDVVLWNCLIGN 85
K +HGY ++ GL + AL+D YAK G V + KIF GL + + +V +N L+
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 86 YARNGLVGEAVYLLQQM 102
Y +G +A L +M
Sbjct: 512 YVNSGSHDDAQMLFTEM 528
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 59/102 (57%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +S + A++ T+ + + +G+ +HG+ I+ +S ++ V AL++MYAK GL
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ G +F+ + DKD++ WN +I Y +G +A+ + +M
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG S + + F + + + +HGY I+ G +L ALI +Y K G
Sbjct: 285 MRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGK 344
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V +F + +K + WN LI ++ G + EA+ L ++
Sbjct: 345 VKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSEL 386
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
K+ HG I+I L + +L LI+ Y+K G V R++FDG++++ +V WN +IG Y R
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 89 NGLVGEAVYLLQQM 102
N + EA+ + +M
Sbjct: 140 NRMESEALDIFLEM 153
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G + S T+ + A G + + K LH ++ + +L V TAL+D+YAK G++
Sbjct: 157 GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 216
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQ 101
++F+ + DK V W+ ++ Y +N EA+ L ++
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
+ GK +H + G S++ V ++ +DMYAK G + IF + +K++ LWN +I
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 86 YARNGLVGEAVYLLQQM 102
+A++ E + L ++M
Sbjct: 339 FAKHARPKEVMILFEKM 355
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HG CI+ G S TAL+DMY K G + G +FDG++++DVV W +I + +
Sbjct: 462 GKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 89 NGLVGEAVYLLQQM 102
NG V EA +M
Sbjct: 522 NGRVEEAFRYFHKM 535
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%)
Query: 21 GDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWN 80
G F G+S+ + I+ G+S ++ + +I MY L+ K+FD + ++++V W
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWT 75
Query: 81 CLIGNYARNGLVGEAVYLLQQM 102
++ Y +G +A+ L ++M
Sbjct: 76 TMVSGYTSDGKPNKAIELYRRM 97
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 52/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M GL +++T++ L PA GK +HGY + GL H V +AL+DMY K G
Sbjct: 279 MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGF 338
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F K V +N +I YA +GL +AV L QM
Sbjct: 339 ISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM 380
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 54/98 (55%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GL+ V L A+ + + GK +H ++ S ++++LIDMY+K G V
Sbjct: 112 GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNA 171
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+F L ++D+V++N +I YA N EA+ L++ M
Sbjct: 172 RKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + +R ST++ + A + + +G+ +H + G S+L ++ ALID+Y+K G
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F+ L KDV+ WN LIG Y L EA+ L Q+M
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GL ++ T + + + F G+ +HG+ +++G L V T+LI MY + G +
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD +DVV + LI YA G + A L ++
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQ--IGLSSHLNVLTALIDMYAKI 58
M SG + T+L + PA +G+ +H Y + G+++ ++ T+LIDMYAK
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 59 GLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G + ++F+ ++ K + WN +I +A +G + L +M
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G+R ++ A+ + GK LH Y ++ G S +VL +L+DMY+K G
Sbjct: 519 MYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +K+F+ + DVV WN L+ A NG + A+ ++M
Sbjct: 579 LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 63.5 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G +H Y ++ GL+ + LIDMYAK G + R+IFD + ++DVV W+ LI YA
Sbjct: 491 LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYA 550
Query: 88 RNGLVGEAVYLLQQM 102
++G EA+ L ++M
Sbjct: 551 QSGFGEEALILFKEM 565
Score = 58.5 bits (140), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG CI+ L+ + +L DMYA+ G ++ R++FD + D WN +I A
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 89 NGLVGEAVYLLQQM 102
NG EAV + QM
Sbjct: 349 NGYADEAVSVFSQM 362
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GK LH I++ SSHL ALI MY + + ++F G+ KD++ W+ +I ++
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 88 RNGLVGEAVYLLQQM 102
+ G EA+ L++M
Sbjct: 246 QLGFEFEALSHLKEM 260
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 1 MCWSGLRASTSTVLILFPAAGD--TWNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYAK 57
M +G+ + T + L GD + + +G LHGY ++GL +H+ V TA+I MY+K
Sbjct: 62 MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSK 121
Query: 58 IGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G R +FD + DK+ V WN +I Y R+G V A + +M
Sbjct: 122 RGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM 166
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG++ ++ A + G +H Y + +++ V +LID+Y + G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V + R++F + + VV WN +I +A NG E++ ++M
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG+R ++L + N + GKS HGY ++ G S N+ ALIDMY K
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+IFD + +K VV WN ++ Y NG V A + M
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Score = 52.8 bits (125), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG +++G + L V +L+ YA+ G + RK+FD + +++VV W +I YAR
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 89 NGLVGEAVYLLQQM 102
+AV L +M
Sbjct: 213 RDFAKDAVDLFFRM 226
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 47/98 (47%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G R + L + A G LHG +I V T +DMYA G +++
Sbjct: 106 GGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYA 165
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +FD + +DVV WN +I Y R GLV EA L ++M
Sbjct: 166 RNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Score = 52.8 bits (125), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQI-GLSSHLNVLTALIDMYAKIG 59
MC SG++ ++ + A + K +H CI + GL S L++ ALI+MYAK G
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHS-CIHVNGLESELSINNALINMYAKCG 393
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R +F+ + ++VV W+ +I + +G +A+ L +M
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G R +T T+ L P+ + N GK +H + I+ G +++ V T++ID YAK+G
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +++FD D+ ++ W +I YA +G A L QM
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S + + TV+ +F A G + + + G +H I+ + L++ A+I YAK G + +
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +FD + +KD V + +I Y +GLV EA+ L +M
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 9 STSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIF 68
S S VL D W + + +HG+ I+ G S + V +I Y K + RK+F
Sbjct: 131 SISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVF 190
Query: 69 DGLVDKDVVLWNCLIGNYARNG 90
D + ++DVV WN +I Y+++G
Sbjct: 191 DEMSERDVVSWNSMISGYSQSG 212
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHL------NVL--TALI 52
M +G++A+ + ++ L A G + V GK HG+ +G + NV+ T+LI
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 53 DMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
DMYAK G + R +FDG+ ++ +V WN +I Y++NG EA+ + M
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+S+H Y + G ++ AL++MYAK G +K F+ L KD + W +I A
Sbjct: 335 LGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLA 394
Query: 88 RNGLVGEAVYLLQQM 102
+G EA+ + Q+M
Sbjct: 395 SHGHGNEALSIFQRM 409
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 6 LRASTSTVLILFP----AAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLV 61
LR S FP A + G +HG+ ++ G ++ V T L+ MY G V
Sbjct: 99 LRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEV 158
Query: 62 HWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++G ++F+ + +VV W LI + N +A+ ++M
Sbjct: 159 NYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM 199
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG+R ++L + N + GKS HGY ++ G S N+ ALIDMY K
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+IFD + +K VV WN ++ Y NG V A + M
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG +++G + L V +L+ YA+ G + RK+FD + +++VV W +I YAR
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 89 NGLVGEAVYLLQQM 102
+AV L +M
Sbjct: 213 RDFAKDAVDLFFRM 226
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 62.8 bits (151), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 60/99 (60%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+G++ + T+ + PA G+ G+S HG+ +++ L +++V +ALIDMYAK G ++
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F+ + K++V WN L+ ++ +G E + + + +
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
TV + P+ GD+ +G+ +HGY I+ GL V++A+IDMY K G V+ +F+
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQ 100
+ + N I +RNGLV +A+ + +
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 48/98 (48%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GL + + LF + F VGK +H GL V ++ MY + G +
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+FD + DKDVV + L+ YAR G + E V +L +M
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 62.4 bits (150), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 55/102 (53%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M S + T +++ A + +G+ +H +++GL L V +LI+MY K+
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R +FD + ++D++ WN +I A+NGL EAV L Q+
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
R + S +L L +G W +S HGY +IGL V AL+++Y K G V G+
Sbjct: 145 RMTLSPMLKLCLHSGYVW---ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKV 201
Query: 67 IFDGLVDKDVVLWNCLIGNYARNGLVGEAVYL 98
+F+ + +DVVLWN ++ Y G EA+ L
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 44/98 (44%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G R+ T+ +F G + GK +H Y I+ G L V + ++DMY K G +
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ FD + D V W +I NG A ++ QM
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIG 84
+ ++GK H + + ++ LI MY+K G + + R++FD + D+D+V WN ++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 85 NYARN 89
YA++
Sbjct: 114 AYAQS 118
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 62.0 bits (149), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 6 LRASTS------TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIG 59
++A+TS T+L + PA DT +G+ H + + L + V TA++DMY+K G
Sbjct: 264 MQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCG 323
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++IFD + +K V WN +I YA NG A+ L M
Sbjct: 324 EIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G LH + G + + V T ++DMYAK G + R FD + + V W LI Y R
Sbjct: 97 GLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIR 156
Query: 89 NGLVGEAVYLLQQM 102
G + A L QM
Sbjct: 157 CGELDLASKLFDQM 170
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 62.0 bits (149), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 51/94 (54%)
Query: 9 STSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIF 68
S +T+ + PA + GK +H ++ + +L +L+DMY K G V + R++F
Sbjct: 336 SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 69 DGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
D ++ KD+ WN ++ YA NG + E + L + M
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM 429
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M S + ++ + A D + VG+ +H ++ V L+ +Y + GL
Sbjct: 227 MLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGL 286
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+FDG+ +++VV WN LI ++ V E L ++M
Sbjct: 287 FDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM 328
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G+ + ++ + A T + + GKSLHGY +++G+ S ++ ALIDMY K G
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ IF + K ++ WN +I Y +G A+ L +M
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM 669
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG I+ GL ++ V ++LID+Y+K GL K+F + +++V WN +I Y+R
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR 554
Query: 89 NGLVGEAVYLLQQM 102
N L ++ L M
Sbjct: 555 NNLPELSIDLFNLM 568
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 19 AAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVL 78
A + N G+ +H +++GL + V T+L+ MY+K G+V +F +VDK + +
Sbjct: 281 ACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI 340
Query: 79 WNCLIGNYARN 89
WN ++ YA N
Sbjct: 341 WNAMVAAYAEN 351
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFD------ 69
L A N GK++HG + +G + T+L++MY K G + + ++FD
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQ 125
Query: 70 -GLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G+ +DV +WN +I Y + E V ++M
Sbjct: 126 SGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRM 159
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GL T+ ++ + G + G+ +HGY ++ GL V +L+ MYA +G +
Sbjct: 41 GLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEIT 100
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD + +DVV WN LI +Y NG +A+ + ++M
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRM 138
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +G+R ++ L T GK +HGY + ++ V TAL+DMYAK G
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++F + ++D W LI A NG+ G A+ L +M
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S L+ T++ A N +G+ ++ + + + + AL+DM+ K G +
Sbjct: 142 SNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDK 200
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQ 101
R +FD + DK+V W ++ Y G + EA L ++
Sbjct: 201 ARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + S+ T++ L A +T + G+ +H Y + +L++ ALIDMYAK G
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH 583
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R++FD KD V WN +I Y +G V A+ L QM
Sbjct: 584 LEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM 625
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNY 86
++GKSLH Y ++ L ++V+ +LID+Y K+G + ++F D +V+ WN +I +Y
Sbjct: 450 LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASY 508
Query: 87 ARNGLVGEAVYLLQQM 102
+A+ L +M
Sbjct: 509 VHCEQSEKAIALFDRM 524
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S R T + AAG+ + +G+ H ++ GL + + AL+DMYAK G
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K FD +DVV WN +I +YA +G +A+ +L++M
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +H + ++ GL +++ LID Y K G V K+F+G+ +K+++ W L+ Y +
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 89 NGLVGEAVYLLQQM 102
N L EA+ L M
Sbjct: 328 NALHKEAMELFTSM 341
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +H Y I+ L + V +LIDMYAK + RK+FD DVVL+N +I Y+R
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 89 NGL---VGEAVYLLQQM 102
G + EA+ + + M
Sbjct: 429 LGTQWELHEALNIFRDM 445
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + +R S T + L A+ + + K +HG + GL+ + +ALID+Y+
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R +FD + KD+V+WN + Y + EA+ L ++
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLS--SHLNVLTALIDMYAKI 58
M SG A T T + A +G+SLHG I+ G S +H++V ++I MY+K
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKC 339
Query: 59 GLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G +F+ LV +DV+ N ++ +A NG+ EA +L QM
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSH-LNVLTALIDMYAKIGLVHWG 64
++ +TV+ + GD G+++HGY +++ + S L V+ ++IDMY K GL
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F +D+V WN +I +++NG +A L +++
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG+ S+ V + A G N V GK +H ++ GL + V T L+ +Y+++G +
Sbjct: 98 SGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIEL 157
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+K FD + +K+ V WN L+ Y +G + EA + ++
Sbjct: 158 AKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI 196
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ LH CI+ G ++V T+L+D Y K GRK+FD + +++VV W LI YAR
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 89 NGLVGEAVYLLQQM 102
N + E + L +M
Sbjct: 172 NSMNDEVLTLFMRM 185
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK HG+ I+ L S L V +AL+ MYAK G + ++F +KD+V WN +I YA+
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 89 NGLVGEAVYLLQQM 102
+G +A+ + ++M
Sbjct: 574 HGQAMKALDVFKEM 587
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGL 91
+H ++ V TAL+D Y K+G V K+F G+ DKD+V W+ ++ YA+ G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 92 VGEAVYLLQQM 102
A+ + ++
Sbjct: 475 TEAAIKMFGEL 485
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +H ++ GL + V +LI++Y K G V R +FD K VV WN +I YA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 89 NGLVGEAVYLLQQM 102
NGL EA+ + M
Sbjct: 273 NGLDLEALGMFYSM 286
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 56/99 (56%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+G + ST + A + VG+ +H ++ G+ +H+ + ++L+DMYAK G ++
Sbjct: 267 AGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIND 326
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++FD + +K+V W +I Y +NG EA+ L +M
Sbjct: 327 ARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM 365
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +H I+ G LN+ L+ ++ K G + + R++FD L + +N +I Y +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 89 NGLVGEAVYLLQQM 102
+GLV E + L+Q+M
Sbjct: 113 HGLVKELLLLVQRM 126
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T++ + P G +G+ LHG+ I+ G + N+ A+IDMYAK G ++ +IF+ L
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+D+V WN +I A++ A+ + +QM
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK++HG+ I+ L+S + + LIDMYAK G + +F + +K++V WN +I
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620
Query: 89 NGLVGEAVYLLQQM 102
+G + +++ L +M
Sbjct: 621 HGKLKDSLCLFHEM 634
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G LHG + G+ ++ +L+ MY+K G K+F + D V WNC+I Y
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 88 RNGLVGEAVYLLQQM 102
++GL+ E++ +M
Sbjct: 317 QSGLMEESLTFFYEM 331
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G+ + T A ++ + ++G+S+H + S++ V +ALI MYAK G
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V ++FD + +K++V W +I YARNG EA+ L+ +M
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
TV + A + G+ +H ++ + + + V T+L+DMYAK G + RK+FDG+
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM 345
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+++ V W +I +AR G EA+ L + M
Sbjct: 346 SNRNTVTWTSIIAAHAREGFGEEAISLFRIM 376
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ + +GL S V ++LID+Y K G V GR++FD +V D V WN +I YA
Sbjct: 468 LGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYA 527
Query: 88 RNGLVGEAVYLLQQM 102
NG EA+ L ++M
Sbjct: 528 TNGQGFEAIDLFKKM 542
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSH---LNVLTALIDMYAK 57
M G+RA T + A +F G+ +HG I +SSH L V ALI MY +
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG---SIEVSSHRCNLYVCNALISMYKR 231
Query: 58 IGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G V R++FD + ++D V WN +I Y +GEA LL +M
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM 276
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSH---LNVLTALIDMYAK 57
M G+RA T + A +F G+ +HG I +SSH L V ALI MY +
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG---SIEVSSHRCNLYVCNALISMYKR 231
Query: 58 IGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G V R++FD + ++D V WN +I Y +GEA LL +M
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRM 276
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKI-- 58
M SG + T+ +F A + N +GK LH + I+ GL +V +L+DMYAK
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSA 317
Query: 59 -GLVHWGRKIFDGLVDKDVVLWNCLIGNYARN-GLVGEAVYLLQQM 102
G V RK+FD + D V+ W LI Y +N L EA+ L +M
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
L S T L + + G+ +H +++GLS + V ALI MY+K G +
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++F+ + +++V+ W +I +A++G + QM
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTA-LIDMYAKIGLVH 62
+GL T++ L A G+ + VGK +HG I+ + L A +IDMY K L+
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 63 WGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+F+ VD++VV+W LI +A+ EA L +QM
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GKS+HGY I+ G+ T+ IDMYA+ G + R +FD + +++V+ W+ +I +
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI 390
Query: 89 NGLVGEAVYLLQQM 102
NGL EA+ +M
Sbjct: 391 NGLFEEALDCFHKM 404
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G+R T + A G+T + G+ +HG S L V ALI MY +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R++FD + ++D V WN +I YA G+ EA L +M
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M GL+ + PA G GK +H I+ H+ V +ALIDMY K
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+H+ + +FD + K+VV W ++ Y + G EAV + M
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 54/91 (59%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T++ + + + +GK +HG I++G S+L V + L+ MYA +G + +K+F GL
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
D++ V++N L+G G++ +A+ L + M
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGM 231
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG+ T+ A + + G HG I GL ++ V +L+ +Y K G
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++F+ + +D V W ++ YA+ G E + L +M
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G S +T++ L P G G+S+HG + GL V ALI Y+K
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 201
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F + DK V WN +IG Y+++GL EA+ + + M
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 4 SGLRASTSTVLILFPAAGDTWN-FVVG-KSLHGYCIQIGLSSHLNVLTALIDMYAKIGLV 61
S L + T+ I A ++N F + + + + + GL + V T+L+++Y K G V
Sbjct: 42 SSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCV 101
Query: 62 HWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEA----VYLLQQ 101
+ +FD + ++D V+WN LI Y+RNG +A + +LQQ
Sbjct: 102 TSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 43/102 (42%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M GL T+ L +GK LHGY ++ + V TALIDMYAK G
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F + WN +I Y+ +GL A+ +M
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G SLHGY I+ GL + V+ LI MY+K V +F+ L + ++ WN +I
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCV 424
Query: 88 RNGLVGEAVYLLQQM 102
++G A + QM
Sbjct: 425 QSGRASTAFEVFHQM 439
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+S+H +++GL ++L +L MYAK G V + +FD + +++LWN +I YA+
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ + +M
Sbjct: 301 NGYAREAIDMFHEM 314
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
+R T ++ A + +S++ Y + + + +ALIDM+AK G V R
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+FD +D+DVV+W+ +I Y +G EA+ L + M
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 54/102 (52%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +G ++ ++ + A+G N + G LH Y I+ G S+L V LIDMY+K L
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + F + DKD++ W +I YA+N EA+ L + +
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+ S+ L A + G LH +++G S ++ AL+ MYAK +
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 65 RKIFDGLVDK-DVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++FDG +K D VLWN ++ +Y+ +G E + L ++M
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 60.1 bits (144), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+ A++ T+L + A ++ ++H ++ G SH+ + ALIDMYAK G +
Sbjct: 348 GIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAA 407
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++F L +KD+V W+ +I Y +G EA+ + + M
Sbjct: 408 REVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
F++G LH C++ G V +LI MYAK + RK+FD ++ +D V + +I +
Sbjct: 63 FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS 122
Query: 86 YARNGLVGEAVYLLQQM 102
++GL+ EA+ L+++M
Sbjct: 123 CCQDGLLYEAMKLIKEM 139
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 6 LRASTSTVLILFPAAGD-TWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
LR + T+L + PA + + + K +HG+ + G + + A + MY + G V
Sbjct: 247 LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS 306
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +F+ +DVV+W+ +I YA G E + LL QM
Sbjct: 307 RVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 14 LILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVD 73
LIL A V+GK LH I+ G+ S + V ++LI MY K G V RK+FD + +
Sbjct: 50 LILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE 109
Query: 74 KDVVLWNCLIGNYARNG 90
++V WN +IG Y NG
Sbjct: 110 RNVATWNAMIGGYMSNG 126
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G R T++ + P +GK LH + + + ++ V L+DMYAK G++
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F + KDVV WN ++ Y++ G +AV L ++M
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLN-------VLTALID 53
M SG++ + T++ + + GK +H Y I+ + N V+ LID
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 54 MYAKIGLVHWGRKIFDGLV--DKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
MYAK V R +FD L ++DVV W +IG Y+++G +A+ LL +M
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T +F A G+ + G+S H + G S++ V AL+ MY++ + RK+FD +
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
DVV WN +I +YA+ G A+ + +M
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSS-HLNVLTALIDMYAKIGLVHWGR 65
R + T+ A +GK +H Y ++ ++ L V LIDMYAK G + R
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+FD ++ K+ V W L+ Y +G EA+ + +M
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG T L + + +G H I+ L+ +L V AL+DMYAK G +
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R+IF+ + D+D V WN +IG+Y ++ EA L ++M
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 14 LILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVD 73
++L A +T N G+ +H I++GL + AL+DMYAK + R++F+ +VD
Sbjct: 165 IVLSTCARET-NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 74 KDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ V W CL Y + GL EAV + ++M
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 56/99 (56%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S ++++ ST+ + A G N +G +H I++GL+S++ V ++L+ MY+K +
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA 380
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+F+ L +K+ V WN +I YA NG + + L M
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +H ++ GL L+ ++LIDMY+K G++ RK+F L + VV N LI Y++
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 89 NGLVGEAVYLLQQM 102
N L EAV L Q+M
Sbjct: 608 NNL-EEAVVLFQEM 620
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GK++H + +G+ S + A++D+YAK V + K FD ++KDV WN ++ Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYS 136
Query: 88 RNGLVGEAV 96
G G+ +
Sbjct: 137 SIGKPGKVL 145
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTA--LIDMYAKIGLVHWGRKIFDGLVDK-DVVLWNCLIGN 85
G+++H L+ L+ LT+ LIDMYAK G + ++FD + + +VV WN LI
Sbjct: 751 GRAIHSLIFH--LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Query: 86 YARNGLVGEAVYLLQQM 102
YA+NG +A+ + M
Sbjct: 809 YAKNGYAEDALKIFDSM 825
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 59.3 bits (142), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S LRA ST + A+ + ++GK LH + I+ G ++ + L+DMYAK G +
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEA 95
++F+ + D++ V WN LI +A NG GEA
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNG-DGEA 536
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 40/87 (45%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
+ A + + +G+ LH + S L+V +L+DMYAK + IF L +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
V W LI Y + GL G + L +M
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKM 443
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG+ T+ I+ + + K H I+ G S + TAL+D Y+K G V
Sbjct: 319 SGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDT 378
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +FD L K+++ WN L+G YA +G +AV L ++M
Sbjct: 379 ARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 1 MCWSGLR-ASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIG 59
M W L T T ++ A+ + VGK LH +++G+ + V LIDMY+K G
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R F+ + +K V WN +I YA +G EA+ LL M
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM 316
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ HG ++ G S V TAL DMY K G + R+ FD ++ K+ V+WN +I Y
Sbjct: 538 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 597
Query: 89 NGLVGEAVYLLQQM 102
NG EAV L ++M
Sbjct: 598 NGRGDEAVGLYRKM 611
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIG- 59
M G S T+ + A + V G HG ++ GL ++ V AL+ MYAK G
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+V +G ++F+ L + V + +IG AR V EAV + + M
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HG+ +++G+ S + L+D+Y + G + RK+FD + +DV WN + +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 89 NGLVGEAVYLLQQM 102
G +GEA + M
Sbjct: 85 VGDLGEACEVFDGM 98
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HG+ ++ GL S + ++L+DMY K G + R IFD +V+KDVV W +I Y +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 89 NGLVGEAVYLLQQM 102
+ E L ++
Sbjct: 297 SSRWREGFSLFSEL 310
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
R + T + A D +GK +HGY ++G + ++L+DMY K G + +
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 67 IFDGLVDKDVVLWNCLIGNYARNGLVGEAV 96
+ DG D+V W LIG A+NG EA+
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
+ ST L T GK +H + G + + L+ MYAK G + RK
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 67 IFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+FD + ++D+ WN ++ YA GL+ EA L +M
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M S + S T + + D +GK +H + + G V AL+ Y+K G
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R++FD + +K +V WN L+ + +NGL EA+ + QM
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG ++T + L A T +G +H Y I GL ++ + TALI++Y++ G V
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++FD + + +V W +I Y +G +AV L +M
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 11 STVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDG 70
+T++ + P G + +G+++H + L + V AL++MY K G + R +FD
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +DV+ W C+I Y +G V A+ L + M
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLM 310
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + G+R + T+ L GD GK LHG+ ++ + S + + T+LI MYAK
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V ++F G W+ +I +N LV +A+ L ++M
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T + AAG+ + +G +HG ++ V AL+ MY G V R +FD +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++DV+ WN +I Y RNG + +A+ + M
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + + +T+ L PA + ++H Y + G S L+ T L+ +Y+K G
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 61 VHWGRKIFDGLVD----KDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ KIF+G+ + KDVVLW LI Y +G A+ + +M
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 13 VLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLV 72
VL + D W G+ +HG + G S ++V+T LI MY G + RK+FD ++
Sbjct: 122 VLKIAVRVSDVW---FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEML 178
Query: 73 DKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
KDV +WN L+ Y + G + EA LL+ M
Sbjct: 179 VKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + T+L + A D + +G+ + Y G++ +++ A+IDMYAK G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F+ + +++VV W +I A +G EA+ + +M
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +G + + ST+++L A G + G+S+H I+ L+S + + TALIDMY K
Sbjct: 241 MVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE 300
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V R+IFD L ++ V WN +I + +G + L + M
Sbjct: 301 VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM 342
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK HG I+ G L V +L+ MY G + +K+F + +D+V WN +I R
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVR 196
Query: 89 NGLVGEAVYLLQQM 102
NG V A L +M
Sbjct: 197 NGDVLAAHKLFDEM 210
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYAKIG 59
M SG + T+L L G + GK + G ++ + ALIDMY+K G
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+H R IFD +K VV W +I YA NG+ EA+ L +M
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GK +HG ++ SH+ V ++L+DMYAK G + R+IF+ L ++DVV +I YA
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 88 RNGLVGEAVYLLQQM 102
+ GL EA+ + ++
Sbjct: 231 QLGLDEEALEMFHRL 245
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 44/74 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK H + ++ L + + +LIDMY+K G + + R++FD + ++ + WN ++ Y++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 89 NGLVGEAVYLLQQM 102
+GL E + L + M
Sbjct: 333 HGLGREVLELFRLM 346
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G LHG ++ G +H+ V AL++MYAK G + RK F G+ +D+V WN +I +
Sbjct: 357 GDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSH 416
Query: 89 NGLVGEAVYLLQQM 102
+GL EA+ +M
Sbjct: 417 HGLGREALEAFDRM 430
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 2 CWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYAKIG 59
C SG+R + +T++ + A T +G +HGY ++G + ++V TAL+DMY+K G
Sbjct: 212 CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCG 271
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++ +F+ + K+V W + A NG E LL +M
Sbjct: 272 CLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM 314
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G++ T + G + GK +H + ++ G ++V+ ALI MY K G V
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +FD + +D++ WN +I Y NG+ E + L M
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM 288
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 9 STSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIF 68
+ STVL+ +G +GK +H I++GL + V T++IDMY K G V RK F
Sbjct: 289 TLSTVLLAVSHSG---ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 69 DGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
D + +K+V W +I Y +G +A+ L M
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 18 PAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL--VHWGRKIFDGLVDKD 75
PA G T +S+H + I+ G ++V L+D YAK G V RKIFD +VDKD
Sbjct: 197 PAKGLT------ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
V +N ++ YA++G+ EA + +++
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 19 AAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVL 78
A ++ GK H G S + V +ALI MY+ G + RK+FD + +++V
Sbjct: 85 ACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 79 WNCLIGNYARNGLVGEAVYLLQQM 102
W +I Y NG +AV L + +
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDL 168
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 21 GDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWN 80
G+ + +G+ LHG + GLS + ++ LIDMY+K G + +FD ++D V WN
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 81 CLIGNYARNGLVGEAVYLLQQM 102
LI Y R G E + LL +M
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKM 240
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S +R TV ++ A D G+ + GY I+ G+ + +V T+ I MYAK G +
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++F + + DV ++ +I + A++G EA+ + + M
Sbjct: 513 ANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 57.8 bits (138), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 11 STVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDG 70
+T+++L A G N +GK +H + L + + TAL+DMYAK G + + R +F+
Sbjct: 215 TTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFER 272
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+VDK+V W+ +I A+ G EA+ L +M
Sbjct: 273 MVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM 304
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G++ +++ +F A + +G+ H Y ++ L + +LIDMYAK G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ K+F+GL +K WN +I Y +GL EA+ L ++M
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SGL + TV L A + +GK +HG+ I+ L L V +++ +Y G +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +FD + DK +V WN +I Y +NG A+ + +QM
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 11 STVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDG 70
+T++ + P +GK +HG+ +++ L L + AL+DMY+K G + + IF
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+K+VV WN ++G ++ G +L+QM
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G ++HG ++ GL + V AL+ Y G V ++FD + ++++V WN +I ++
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 88 RNGLVGEAVYLLQQM 102
NG E+ LL +M
Sbjct: 265 DNGFSEESFLLLGEM 279
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK LH + ++ GL S+L V AL+ MY+ GL+ R +FD +DV WN +I Y R
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 89 NGLVGEAVYLLQQM 102
E++ LL +M
Sbjct: 214 MKEYEESIELLVEM 227
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GK +H I+ L S + + + L+DMY+K G +H R +F+ + +D V WN +I YA
Sbjct: 621 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 88 RNGLVGEAVYLLQQM 102
+G EA+ L ++M
Sbjct: 681 HHGKGEEAIQLFERM 695
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G +HG +++G + + +AL+DMYAK ++F G+ +K+ V W+ +I
Sbjct: 198 LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 88 RNGLVGEAVYLLQQM 102
+N L+ A+ ++M
Sbjct: 258 QNNLLSLALKFFKEM 272
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G ++G I+ LS + V A IDMY K + ++FD + +D V WN +I + +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 89 NGLVGEAVYLLQQM 102
NG E ++L M
Sbjct: 461 NGKGYETLFLFVSM 474
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 19 AAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVL 78
AA + VG S+H IQ G S V +L+DMYAK G++ K F + +K +V
Sbjct: 613 AAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS 672
Query: 79 WNCLIGNYARNGLVGEAVYLLQQM 102
WN ++ YA +GL AV L M
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSM 696
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIG 84
+ V G ++H Y +Q GL ++V T+L+ MY+K G + ++F + D+DVV W+ +I
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 85 NYARNGLVGEAVYLLQQM 102
+Y + G EA+ L + M
Sbjct: 375 SYEQAGQHDEAISLFRDM 392
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 19 AAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVL 78
A + +F G +H ++GL S + + TAL++MY K + R++FD + KDVV
Sbjct: 109 ACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT 168
Query: 79 WNCLIGNYARNGLVGEAVYLLQQM 102
WN ++ A+NG A+ L M
Sbjct: 169 WNTMVSGLAQNGCSSAALLLFHDM 192
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GKS+H Y I+ + S L TA+I MYAK G K F+ L KD V +N L Y
Sbjct: 419 LGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYT 478
Query: 88 RNGLVGEAVYLLQQM 102
+ G +A + + M
Sbjct: 479 QIGDANKAFDVYKNM 493
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
TV+ + PA + +G+ L GY + G ++ V A I+MY+K G++ +++F+ L
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 72 VD-KDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +++ WN +IG+ A +G EA+ L QM
Sbjct: 277 GNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 308
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGL 91
LH + G S T LI YAK+G + R++FD + +DV +WN +I Y R G
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 92 VGEAVYLLQQM 102
+ A+ L M
Sbjct: 164 MKAAMELFDSM 174
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG + V I+ + + + V GK +H Y I++GL + V +ALIDMY+K GL+
Sbjct: 302 SGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKC 361
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEA 95
+F G+ +K++V +N LI +G A
Sbjct: 362 AMSLFAGIPEKNIVSFNSLILGLGLHGFASTA 393
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G + + T++ L D +V S+H +C++I L SH V AL++MY++ +
Sbjct: 202 GHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F+ + + D+V + LI Y+R G EA++L ++
Sbjct: 262 CSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL 299
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 49/74 (66%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+S+H ++ G + + V ++L+DMYAK G + + RK+FD + ++VV W+ ++ YA
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 88 RNGLVGEAVYLLQQ 101
+ G EA++L ++
Sbjct: 194 QMGENEEALWLFKE 207
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +H ++GL S + V +ALIDMY+K G++ +F + K++++WN +I YAR
Sbjct: 339 GSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYAR 398
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ L Q+
Sbjct: 399 NGDSIEAIKLFNQL 412
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G + S ++ L +G+ + + LHGY + G S+ + +L+ Y +
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDA 109
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD + D DV+ WN L+ Y ++G E + L ++
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLEL 147
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 28 VGKSLHGYCIQIGLSS-HLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNY 86
+G +H +++GL ++ V LIDMY K G + +F + +KD V WN ++ +
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Query: 87 ARNGLVGEAVYLLQQM 102
+RNG + ++ QM
Sbjct: 234 SRNGKLELGLWFFHQM 249
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +R + TV + PA + +GK LHG+ I+ L ++ V +AL+DMY+K G
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + +F +++ V + +I Y ++G+ A+ L M
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G + TV L AA + N +GK H + I+ G+ + + LIDMY+K GL+
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRIS 472
Query: 65 RKIFD--GLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+K+F+ G ++D WN +I Y +NG + + ++M
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIG--LSSHLNVLTALIDMYAKIGLVHW 63
++ S + + +FPA + + +G +++G L V+++ I MYA++G +
Sbjct: 210 VKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIES 269
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLL 99
R++FD V++++ +WN +IG Y +N + E++ L
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF 305
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ HG+ + + ++ +L+ MY++ G VH +F + ++DVV WN +I +
Sbjct: 336 LGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 88 RNGLVGEAVYLLQQM 102
+NGL E + L+ +M
Sbjct: 396 QNGLDDEGLMLVYEM 410
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYAKIGLVHWGRKIFDG 70
TV+ L A + + K HG I+ L+ + ++V T+++D YAK G + R+ FD
Sbjct: 428 TVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQ 487
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +K+++ W +I YA NGL +A+ L +M
Sbjct: 488 ITEKNIISWTVIISAYAINGLPDKALALFDEM 519
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G +TST++++ A W G+ +HGY I+ G +V +++ MYA +
Sbjct: 122 GFEPNTSTLVLVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARN 89
RK+FD + ++DV+ W+ +I +Y ++
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQS 203
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
+G+ + ++ + A + +F GK LHG+ + G S ++V ALIDMY++ G V
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 64 GRKIFDGLVDKD-VVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +F+G+ +K +V W +I A +G EAV L +M
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +H ++ GL SHL V T LI MY G V + RK+FD + ++V WN +I R
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 89 NGLVGEAVYLLQQM 102
V A + +M
Sbjct: 185 GNDVAGAREIFDKM 198
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK + Y + GL + ++ AL+DM++K G +H R+IFD L + +V W +I YAR
Sbjct: 276 GKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYAR 335
Query: 89 NGLVGEAVYLLQQM 102
GL+ + L M
Sbjct: 336 CGLLDVSRKLFDDM 349
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
R T +LF D +G + G+ +++ L +V A I M+A G + RK
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 67 IFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+FD +D+V WNCLI Y + G +A+Y+ + M
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 49 TALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
T +I YA+ GL+ RK+FD + +KDVVLWN +IG + +A+ L Q+M
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ +HG I+ G S L+V +L+ MY K G + IF+ + +D++ W CLI YA+
Sbjct: 449 GQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAK 508
Query: 89 NGLVGEAVYLLQQM 102
NGL+ +A M
Sbjct: 509 NGLLEDAQRYFDSM 522
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
VG +H ++ G +++ V +ALIDMYAK + R + +G+ DVV WN +I
Sbjct: 245 VGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCV 304
Query: 88 RNGLVGEAVYLLQQM 102
R GL+GEA+ + +M
Sbjct: 305 RQGLIGEALSMFGRM 319
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+ S H ++ G +++ V AL+DMYAK G++ K+F+G+++KDV+ W L+
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 88 RNGLVGEAVYLLQQM 102
NG EA+ L M
Sbjct: 407 HNGSYDEALKLFCNM 421
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG+C++IG + V +L+DMY+K G ++ K+F +VD+ ++ WN +I +
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 89 NGLVGEAV 96
G +A+
Sbjct: 186 AGYGSKAL 193
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGL--SSHLNVLTALIDMYAKIGLVHWG 64
R T+ L A T GK +HG+ ++ G S + +L+D+Y K G +
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK FD + +K ++ W+ LI YA+ G EA+ L +++
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK + +++ +VL +++DMY K GLV K F + KDV+ W +I Y +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 89 NGLVGEAVYLLQQM 102
+GL ++V + +M
Sbjct: 392 HGLGKKSVRIFYEM 405
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNY 86
V+G S+H + ++ S+ V AL+DMY K V RK+FD + ++ V+WN +I +Y
Sbjct: 65 VLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHY 124
Query: 87 ARNGLVGEAVYLLQQM 102
G V EAV L + M
Sbjct: 125 THCGKVKEAVELYEAM 140
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T+L L A F + K +H Y + + H + + L++ Y + G + + + +FD +
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
D+DVV W+ LI YA +G A+ Q+M
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEM 274
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWN-FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIG 59
MC G++ S+ + L A G + + F G +HG+ + GL S + V TA++ +Y G
Sbjct: 49 MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 108
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
LV RK+F+ + D++VV W L+ Y+ G E + + + M
Sbjct: 109 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 151
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK LH Y + G S +V +LI MYAK G + + +F+GL +++++ WN ++ A
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542
Query: 89 NGLVGEAVYLLQQM 102
+G E + L+ +M
Sbjct: 543 HGHGEEVLKLVSKM 556
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ + G ++ GL S L V +LI M +G V + IFD + ++D + WN + YA
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 88 RNGLVGEAVYLLQQM 102
+NG + E+ + M
Sbjct: 238 QNGHIEESFRIFSLM 252
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
F G+ LHG + GL + + AL+ MY KIG + R++ + +DVV WN LIG
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 86 YARNGLVGEAVYLLQQM 102
YA + +A+ Q M
Sbjct: 438 YAEDEDPDKALAAFQTM 454
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 33 HGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLV 92
HG+ Q G + V +LIDMY K G V G +F ++++D V WN +I +A+NG
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 93 GEAVYLLQQM 102
EA+ L ++M
Sbjct: 475 NEALELFREM 484
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +H + S + + +AL+DMY+K G V+ +++FD + D++VV WN LI + +
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ + Q M
Sbjct: 231 NGPAVEALDVFQMM 244
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARN 89
+ +H I+ G S+ + + LID Y+K G + GR++FD + +++ WN ++ +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 90 GLVGEAVYLLQQM 102
G + EA L + M
Sbjct: 100 GFLDEADSLFRSM 112
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWN-FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIG 59
MC G++ S+ + L A G + + F G +HG+ + GL S + V TA++ +Y G
Sbjct: 32 MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 91
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
LV RK+F+ + D++VV W L+ Y+ G E + + + M
Sbjct: 92 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 134
Score = 52.8 bits (125), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK LH Y + G S +V +LI MYAK G + + +F+GL +++++ WN ++ A
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525
Query: 89 NGLVGEAVYLLQQM 102
+G E + L+ +M
Sbjct: 526 HGHGEEVLKLVSKM 539
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ + G ++ GL S L V +LI M +G V + IFD + ++D + WN + YA
Sbjct: 161 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 88 RNGLVGEAVYLLQQM 102
+NG + E+ + M
Sbjct: 221 QNGHIEESFRIFSLM 235
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
F G+ LHG + GL + + AL+ MY KIG + R++ + +DVV WN LIG
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 86 YARNGLVGEAVYLLQQM 102
YA + +A+ Q M
Sbjct: 421 YAEDEDPDKALAAFQTM 437
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGL 91
H + ++ GL S V +LI Y+ GL + ++FDG DKDVV W +I + RNG
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 92 VGEAVYLLQQM 102
EA+ +M
Sbjct: 185 ASEAMVYFVEM 195
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYAKIGLVH 62
+G+ A+ TV+ + AAG + G+S+HG ++ G + + + ++L+DMY K
Sbjct: 198 TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD 257
Query: 63 WGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+K+FD + ++VV W LI Y ++ + + + ++M
Sbjct: 258 DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM 297
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 47/74 (63%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HGY ++ G+ +++ +AL++MY+K G + R+++D L + D V + LI Y++
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
Query: 89 NGLVGEAVYLLQQM 102
+GL+ + L + M
Sbjct: 630 HGLIQDGFLLFRDM 643
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M GLR +V L D N +GK +HGY ++ GL L V ++L +Y+K G
Sbjct: 444 MLQEGLRTDEFSVCSLLSVL-DCLN--LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ K+F G+ KD W +I + G + EA+ L +M
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SG + + + AA + +G +H Y +IGL + +V ++L+ MY+K G
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ K F + D++ W LI +YA++G EA+ + M
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLM 744
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G++ T + A G + +G+++H ++ G + VL AL+ MYAK G
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R +FD + KD V WN ++ Y +GL+ EA+ + + M
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM 287
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIG 84
+F G+ LHG+ I+ G+ L+V ALI +Y+K G + IFD ++++D V WN +I
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 85 NYARN 89
+++N
Sbjct: 368 AHSKN 372
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T++ L A N +G+ +HG+ I+ G S+ L+++ +L++ YAK +F +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+KDV+ W+ +I Y +NG EA+ + M
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDM 255
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G + +TVL + A + G+ H I+ GL + + V TAL+DMY K
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAV 96
+F + KDVV W LI + NG+ ++
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSI 350
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQ-IGLSSHLNVLTALIDMYAKIGLVHWGRKIFDG 70
T+ + A G+ G+ +HG+ + + L S L V ++LI MY K G + ++FD
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
L D+V W+ ++ + +NG +AV ++M
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRM 153
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
K H Y I+ G S+ + +L+++Y++ G + K+F+G+ KD V+W LI Y
Sbjct: 385 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGI 444
Query: 89 NGLVGEAVYLLQQM 102
+G +A+ M
Sbjct: 445 HGKGTKALETFNHM 458
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T +F + + +GK +HG+ + G H+ ALIDMY K + K+FD +
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++DV+ WN L+ YAR G + +A L M
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLM 201
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +G+ +++ + P+ + +GK +H Y + G V ALI+MY+K G+
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++F + KDV+ W+ +I YA +G A+ +M
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM 333
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+R S +++ + + G+ +H + ++ + V + L+ MY K G +
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +FD KD+++WN +I YA +GL EA+ + +M
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G H I+ GL + + + T+L+DMY K G V R++FD +V++D+V+W +I A
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 89 NGLVGEAVYLLQQM 102
N EA+ L + M
Sbjct: 293 NKRQWEALGLFRTM 306
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G R T+ + P + GK +H Y ++ +++++T+L+ MY+K G+
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARN 89
+ ++FD L ++V W +I Y N
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQI-GLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK 74
+ P GD +GK +H + ++ V + LID+Y K G + GR++F G +
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 75 DVVLWNCLIGNYARNGLVGEAV 96
+ + W L+ YA NG +A+
Sbjct: 382 NAISWTALMSGYAANGRFDQAL 403
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 35 YCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGE 94
Y ++ + + V T L+++YAK G + R +FD +V+KD+V W+ +I YA N E
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 95 AVYLLQQM 102
+ L QM
Sbjct: 297 GIELFLQM 304
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G LH ++ G + + +T+L+ +Y+ G ++ K+FD + D+ VV W L Y
Sbjct: 129 LGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 88 RNGLVGEAVYLLQQM 102
+G EA+ L ++M
Sbjct: 189 TSGRHREAIDLFKKM 203
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+S+H + ++ + + V +AL+DMY K G + + FD + +K++V N LIG YA
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 88 RNGLVGEAVYLLQQM 102
G V A+ L ++M
Sbjct: 388 HQGQVDMALALFEEM 402
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G ++ + +G S L V AL+DMY+++GL+ R++FD + +D+V WN LI Y+
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 88 RNGLVGEAVYLLQQM 102
+G EA+ + ++
Sbjct: 184 SHGYYEEALEIYHEL 198
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 45/96 (46%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
+A T L+L + + GK LH I+ G+ L+V ALIDMYAK G V K
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 67 IFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
IF + D V WN +I R G + + QM
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
TV + A G + + K ++ Y ++ G V LID+YAK G + R +F+ +
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
KD V WN +I Y ++G + EA+ L + M
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 11 STVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDG 70
+T L+ P +GK +H ++ G S L + ALI+MY+K G + ++F+
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEA 95
+ +DVV W +I Y G+ GE
Sbjct: 570 MSRRDVVTWTGMIYAY---GMYGEG 591
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M GL+ + T+ + A + G +HGY + G+ + TAL+DMYAK G
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F + KD++ W +I +A +G +A+ +QM
Sbjct: 344 LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 42/84 (50%)
Query: 19 AAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVL 78
AA +T N GK +H + G S V ALI MYAK G + K F + K+ V
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760
Query: 79 WNCLIGNYARNGLVGEAVYLLQQM 102
WN +I Y+++G EA+ QM
Sbjct: 761 WNAIINAYSKHGFGSEALDSFDQM 784
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 15 ILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK 74
+L G + F V + +H + GL V LID+Y++ G V R++FDGL K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 75 DVVLWNCLIGNYARNGLVGEAVYLLQQM 102
D W +I ++N EA+ L M
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDM 279
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ LHG +++G SS V AL+ +Y +G + IF + +D V +N LI +
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 88 RNGLVGEAVYLLQQM 102
+ G +A+ L ++M
Sbjct: 366 QCGYGEKAMELFKRM 380
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSS----HLNVLTALIDMYA 56
M GL+ ST +L +AG T N GK +H C+ ++ L + +L+ MYA
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH--CVIAKTTACYDPDLILQNSLVSMYA 514
Query: 57 KIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K G + +IF +V KD V WN +I + +GL +A+ L ++M
Sbjct: 515 KCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEM 560
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HG+ ++ G+ ++TA +DMY+K G V + +IFD ++D V++N +I A
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAH 471
Query: 89 NG 90
+G
Sbjct: 472 HG 473
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGL----SSHLNVLTALIDMYA 56
M SG+R T+ + P G + G+ +HGY I GL SS+ + +L+DMY
Sbjct: 354 MLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV 413
Query: 57 KIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
K G + R +FD + KD WN +I Y
Sbjct: 414 KCGDLRDARMVFDSMRVKDSASWNIMINGYG 444
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
R + ++VL F +GD N G+S+HG ++ G S + V ALIDMY K +
Sbjct: 262 RHTITSVLSAFTVSGDIDN---GRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANS 318
Query: 67 IFDGLVDKDVVLWNCLI 83
IF+ + ++D+ WN ++
Sbjct: 319 IFEAMDERDLFTWNSVL 335
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ +H Y + G+ + +V +ALI MY+K G + R++F+ + +DV +W+ +IG A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 88 RNGLVGEAVYLLQQM 102
+G EAV + +M
Sbjct: 443 MHGCGNEAVDMFYKM 457
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T L AA + + +G+SLHG ++ + S + V +LI Y G + K+F +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+KDVV WN +I + + G +A+ L ++M
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
++AS T++ + A N G+ + Y + ++ +L + A++DMY K G + +
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 66 KIFDGLVDKDVVLWNCLIGNYA 87
++FD + +KD V W ++ YA
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYA 309
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
F G+ +HG I+ GL + + V L+++Y + G RK+ D + +D V WN L+
Sbjct: 156 FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSA 215
Query: 86 YARNGLVGEAVYLLQQM 102
Y GLV EA L +M
Sbjct: 216 YLEKGLVDEARALFDEM 232
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK-DVVLWNCLIGNYA 87
GK +HGY I+ + + V+++LIDMY+K G + ++F DK D V WN +I A
Sbjct: 330 GKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALA 389
Query: 88 RNGLVGEAVYLLQQM 102
++GL +A+ +L M
Sbjct: 390 QHGLGHKALRMLDDM 404
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG++ + + L A + + + HG + G S++ + ++ID YAK G +
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++ FD + KD+ +W LI YA+ G + A L +M
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEM 271
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +SG + ++ L A G GKS+HG+CI+ LN+ A+ DMY K +
Sbjct: 226 MGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSI 285
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + +F + +DV+ W+ LI Y +G V + L +M
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
S +R T+ ++ A + G +H C+++G SS L V +AL+ MY +G +
Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+FD + +D VL+ + G Y + G + + ++M
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREM 226
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGL 91
+HG I G S+L + LID+Y K G V RK+FD + +DVV W +I ++R G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 92 VGEAVYLLQQM 102
+A+ L ++M
Sbjct: 94 HPDALLLFKEM 104
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG + + +L V +AL+ +YA+ G + R FD + ++D+V WN +I Y
Sbjct: 132 GMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 89 NGLVGEAVYLLQQM 102
N + L Q M
Sbjct: 192 NACADTSFSLFQLM 205
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T L+ A + GK +H + + GLS LN+ L+ MY++ G + ++F G+
Sbjct: 219 TCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGM 278
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+++VV W LI A NG EA+ +M
Sbjct: 279 RERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 11 STVLILFPAAGDTWNFVVGKSLHGYCIQIGLSS-HLNVLTALIDMYAKIGLVHWGRKIFD 69
+T+ ++ A F GK +H Y +G + +NV ALIDMY K G + ++F
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 70 GLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
G+ +D++ WN +I A +G EA+ L +M
Sbjct: 249 GIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M SGL+ + V+ + A ++ +G +H + L S+ VL AL+DMYAK G
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F+ + KD+V WN ++ +G EA+ L +M
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 5 GLRASTSTVLILFPA-AGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIG--LV 61
GL A T L A +G +W VV K +H + ++GLSS + V ALID Y++ G V
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVV-KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGV 170
Query: 62 HWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+F+ + ++D V WN ++G + G + +A L +M
Sbjct: 171 RDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ H ++IG S L+ ALI MYAK G+V R++F + D V WN LI +
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 89 NGLVGEAVYLLQQM 102
+G EAV + ++M
Sbjct: 496 HGHGAEAVDVYEEM 509
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 28 VGKSLHGYCIQI-GLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNY 86
+GK +H Y ++ S H + +L+ +Y K G R IF+ + KD+V WN L+ Y
Sbjct: 304 LGKQVHAYVLRREDFSFHFD--NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGY 361
Query: 87 ARNGLVGEAVYLLQQM 102
+G +GEA + ++M
Sbjct: 362 VSSGHIGEAKLIFKEM 377
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G+R ++S + + +G+ +H + L + + LT+LI MY K G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ K+F+ + KDVV WN +I YA++G +A+ L ++M
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 1 MCWSGLRASTSTVLILFPAA----GDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYA 56
M LR S + F +A + +G +HG I+ + + V +LIDMYA
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 57 KIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K G + + + +F+ + DV WN LI Y+ +GL +A+ +L M
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGL 91
LH +++G S+ V ALI+ Y+ G V R +F+G++ KD+V+W ++ Y NG
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 92 VGEAVYLLQQM 102
+++ LL M
Sbjct: 228 FEDSLKLLSCM 238
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ LHG +++G + V ALID+YAK + K+F L K+ V WN +I Y
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 88 RNGLVGEAVYLLQQ 101
G G+A + ++
Sbjct: 426 NLGEGGKAFSMFRE 439
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ +H Y + G+ ++ TA++DMYAK G + +IF+G+ K+V WN L+G A
Sbjct: 325 GRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAI 384
Query: 89 NGLVGEAVYLLQQM 102
+G E++ ++M
Sbjct: 385 HGHGLESLRYFEEM 398
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARN 89
+ LH I+ GL S + V +ALID++AK+G +FD +V D ++WN +IG +A+N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 90 GLVGEAVYLLQQM 102
A+ L ++M
Sbjct: 239 SRSDVALELFKRM 251
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 37 IQIGLSSHLNVL---------TALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+++G+ +H++++ AL+DMY K G + ++F+ + ++DV+ W+ +I A
Sbjct: 276 LELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 88 RNGLVGEAVYLLQQM 102
+NG EA+ L ++M
Sbjct: 336 QNGYSQEALKLFERM 350
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK-DVVLWNCLIGNYA 87
G+ +H I++G S + LI+MY K G V K+F D+ V WN ++ +Y
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYM 375
Query: 88 RNGLVGEAVYLLQQM 102
+NG+ EA+ LL QM
Sbjct: 376 QNGIYIEAIKLLYQM 390
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
F G+ +HG + G + LID+Y K G R +FD L + DV+ N +I +
Sbjct: 384 FEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYS 443
Query: 86 YARNGLVGEAVYLLQQM 102
YA+NG EA+ L ++M
Sbjct: 444 YAQNGFGREALDLFERM 460
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 33 HGYCIQIGLS-SHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGL 91
HG + +GL S++ V +AL+DMY K G + + D + +KDVVL LI Y++ G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 92 VGEAVYLLQQM 102
EAV Q M
Sbjct: 248 DTEAVKAFQSM 258
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 10 TSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFD 69
TS + ++ A G + N G+SLH Y ++ L S + V ++L+DMY ++G + ++F
Sbjct: 108 TSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFS 167
Query: 70 GLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++ V W +I G E + +M
Sbjct: 168 EMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM 200
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
+F A V G+ LH + +GL+ L+V +++ MY+ G + +F G+ +D
Sbjct: 316 MFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRD 375
Query: 76 VVLWNCLIGNYARNGL 91
++ W+ +IG Y + G
Sbjct: 376 IISWSTIIGGYCQAGF 391
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 54/102 (52%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G+ + T+ + + T GK +H + +++GL +++V +L++MYAK G
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ +FD +V +D+ WN +I + + G + A+ +QM
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 48 LTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
TAL+D Y K+G ++ + IF L D+DVV W +I Y ++G GEA+ L + M
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 49 TALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
TA+I YAK G V R +FD + ++D+V WN +I YA++G +A+ L Q++
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
TV+ A G+ +H + + ++ V T LIDMY+K G + +F+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
KD+V WN +I YA +G +A+ L +M
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG CI+ G S +V + I +YAK + +K F+ + ++++ WN +I +A+
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 89 NGLVGEAVYLL 99
NG EA+ +
Sbjct: 451 NGFSHEALKMF 461
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGN 85
F++G L ++ GL S L V + I MY++ G R++FD + KD++ WN L+
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 86 YARNGLVG-EAVYLLQQM 102
++ G G EAV + + M
Sbjct: 250 LSQEGTFGFEAVVIFRDM 267
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ H + +++GL+S V +AL+DMYAK G + K+F+ + K+ +W +I Y+
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 89 NGLVGEAVYLLQQM 102
+G + L +M
Sbjct: 553 HGDFETVMNLFHKM 566
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+R + T++ + + GK +H ++ + V + L+ MY K G +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ IFD KD+++WN +I YA +GL EA+ + +M
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
R+S S+ L D +GK LHG ++ G + V AL+ MY K G +
Sbjct: 409 RSSFSSAL---STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 67 IFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F + KD+V WN +I Y+R+G A+ + M
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNY 86
+ G+ +HG I +G S + + ALIDMYAK V + IF + +DVV W LI
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 87 ARNGLVGEAVYLLQQM 102
A++G +A+ L M
Sbjct: 315 AQHGQAEKALALYDDM 330
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ +H + I ++ V ++L+DMYAK GL++ + +FD + K+ + W ++ YA+
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 89 NGLVGEAVYLLQ 100
+G EA+ L +
Sbjct: 184 SGRKEEALELFR 195
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T L P+ + + +G+ H + GL V T+L++MY+ G + +++FD
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
KD+ WN ++ YA+ GL+ +A L +M
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 42 SSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQ 101
S L ++++ YAK GL+ RK+FD + +++V+ W+CLI Y G EA+ L ++
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 102 M 102
M
Sbjct: 185 M 185
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
+R + +++ L + + FV G H Y ++ L+ + V T+LID+Y+K G + + R
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD + +DV +N +I A +G E + L + +
Sbjct: 272 KVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLT-ALIDMYAKIG 59
M SG+ + T+ + + G GKS+HG+ ++ L + L+ AL+++YA+ G
Sbjct: 294 MIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECG 353
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + + D+++V WN LI YA G+V +A+ L +QM
Sbjct: 354 KLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GK +HG+ I+ +S V +LIDMY+K G V +F+ + + VV WN ++ ++
Sbjct: 423 LGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 88 RNGLVGEAVYLLQQM 102
+NG EA+ L M
Sbjct: 482 QNGNSVEAISLFDYM 496
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 15 ILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK 74
+L AG + VG +HG I+ G+ + T+L+ MY + G + K+FDG+ +
Sbjct: 106 VLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR 165
Query: 75 DVVLWNCLIGNYARNGLVGEAVYLLQQM 102
D+V W+ L+ + NG V +A+ + + M
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCM 193
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVD-KDVVLWNCLIGNYA 87
G+ LHG + G + ++ + ALIDMYAK G + +++F +VD +++V W ++ Y
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 88 RNGLVGEAVYLLQQM 102
+G EAV L +M
Sbjct: 392 SHGYGAEAVELFDKM 406
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 13 VLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLV 72
+ I A+ + GK +H I+ G S+L V+ +++D+Y + G + + F +
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME 275
Query: 73 DKDVVLWNCLIGNYARNGLVGEAVYLLQQ 101
DKD++ WN LI R+ EA+ + Q+
Sbjct: 276 DKDLITWNTLISELERSD-SSEALLMFQR 303
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 48/102 (47%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G++ T + PA GK +H + L + +L+AL+DMY+K G
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+IF+ + KDVV W +I Y +G EA+Y +M
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG ++ ++ + A GK +H C++ G V +AL+DMY K +
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEV 261
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++F + K +V WN +I Y G V +L +M
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G R S +T+ + A + N + GK +HGY I+ +++ + V +LID+Y K G
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 61 VHWGRKIFDGLVDKDVV-LWNCLIGNYARNGLVGEAVYLLQQM 102
+ +F KDV WN +I +Y G +AV + QM
Sbjct: 360 ANLAETVFSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 52/97 (53%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
++ +++T+ ++F A D + G +HG ++ L L + +L+ MY+K+G + +
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F + +KD V WN LI + + EA L ++M
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
+ A + + G +HG +++ + + L+V +L+ MY K G + KIF + + +
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN 503
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
+V +N +I Y+ NG +A+ L +
Sbjct: 504 IVSYNTMISGYSYNGFGKKALKLFSML 530
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
+R + TV+ + A T + K +H + + LSS + V +L+D+Y K G +
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F K + WN +I +A +G EA+ + ++M
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYAK-IGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNG 90
+H + + G ++ V TAL+ YA + + R++FD + +++VV W ++ YAR+G
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 91 LVGEAVYLLQQM 102
+ AV L + M
Sbjct: 208 DISNAVALFEDM 219
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
+F A G G+ LHG I+ GL + ++ MY G + +IF G++ D
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD 191
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
VV WN +I +A+ GL+ +A L +M
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEM 218
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ +H Y ++ + V+TALIDMY K G + G +F+ K + WN +I A
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 89 NGLVGEAVYLLQQM 102
NG A+ L ++
Sbjct: 337 NGFEERAMDLFSEL 350
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 29 GKSLHGYCIQIGLSSHL-NVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
G+ +HG+ I GL + + L++MYAK G + R++F + DKD V WN +I
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 88 RNGLVGEAVYLLQQM 102
+NG EAV + M
Sbjct: 392 QNGCFIEAVERYKSM 406
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+G+ +HG +++G+ +++V AL+ +YA+ G ++ RKIF + + D V WN +IG A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 88 RN 89
R+
Sbjct: 493 RS 494
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M +G R + + A G +H ++ L S + V +AL+DMY+K G
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + + F+ + ++ WN +I YAR+G EA+ L + M
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTA--LIDMYAKIGLVHWGRKIFDGLVD 73
LF A + N + G +LH + + NV+ A LI+MYAK G + + R++FD + +
Sbjct: 65 LFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPE 124
Query: 74 KDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++VV W LI Y + G E L M
Sbjct: 125 RNVVSWTALITGYVQAGNEQEGFCLFSSM 153
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T+ L T + ++G H Y ++ G + ALI+MY++ G + ++F+ +
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM 550
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+KDVV WN LI Y+R+G AV + M
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTM 581
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 54/98 (55%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+RA+ ++ + + G + + + LH ++ G S ++++ T+++D+Y K ++
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R++FD +V+ V WN ++ Y G EAV + +M
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM 254
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 7 RASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRK 66
+ S T+ L + +GK++HG+ I+ G + + A++DMY+K + +
Sbjct: 493 KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIE 552
Query: 67 IFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLL 99
+F +D++LWN +I RNG E L
Sbjct: 553 VFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
+R TV + A + VGK +H +++ + + V T++ DMY K + R
Sbjct: 259 VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESAR 318
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++FD KD+ W + YA +GL EA L M
Sbjct: 319 RVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK H I+ + S++ V +AL+DMY K G ++FD L ++V+ W LI Y
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 89 NGLVGEAVYLLQQM 102
+G V E + ++M
Sbjct: 288 HGKVSEVLKCFEKM 301
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 54/102 (52%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M + ++ ++ST L + ++G SL+ I++G S ++ V T+++ MY+ G
Sbjct: 190 MAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD 249
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R+IFD + ++D V WN +I +N + + + + M
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM 291
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ H I+ G ++V AL+DMY K G IF + D+ WN ++G Y++
Sbjct: 522 GEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581
Query: 89 NGLVGEAVYLLQQM 102
+G+V +A+ +Q+
Sbjct: 582 HGMVEKALSFFEQI 595
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 19 AAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVL 78
A + FV GK LHG ++G + V T L+ MY K +K+FD + ++DVVL
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVL 470
Query: 79 WNCLIGNYARNGLVGEAVYLLQQM 102
W +I ++R G AV +M
Sbjct: 471 WTEMIVGHSRLGNSELAVQFFIEM 494
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK-DVVLWNCLIGNYA 87
G+ +H ++G ++ + + T+L+ Y+ +G V + R++FD +K ++VLW +I Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 88 RNGLVGEAVYLLQQM 102
N EA+ L ++M
Sbjct: 144 ENENSVEAIELFKRM 158
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ LH +++GL ++ V LI+MY + V R +FD +V+ VV +N +I YAR
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 89 NGLVGEAVYLLQQM 102
EA+ L ++M
Sbjct: 208 RNRPNEALSLFREM 221
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 51/97 (52%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
L+ + T+L + + + +GK +H Y + ++ V TALIDM+AK G +
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
IF+ + KD W+ +I YA +G +++ + ++M
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+ +H I+ G + TALIDMY+K G + ++F+ + +KD+V WN L+ + R
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 89 NGLVGEAVYLLQQM 102
NG EA+ + M
Sbjct: 163 NGKGKEALGVFAAM 176
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 22 DTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNC 81
D W +GK +H ++ G S + L+DMY K G + R IF + K VV W
Sbjct: 296 DLW---IGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 82 LIGNYARNGLVGEAVYLLQQM 102
+I YA NG +A+ + ++M
Sbjct: 353 MIDAYAVNGDGVKALEIFREM 373
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 51/91 (56%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
+R + T++ + PA + +G+ LH Y G+ + +ALIDMY+K G++
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 66 KIFDGLVDKDVVLWNCLIGNYARNGLVGEAV 96
+F+ L ++V+ W+ +I +A +G G+A+
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAI 360
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T++ L A + G+ +HG I++ L + +ALIDMY K G++ +F
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+KDV LW +I A +G +A+ L +M
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRM 460
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIG--LSSHLNVLTALIDMYAKI 58
M G+ TVL L G + +GK +HG+ + G SS+L + AL+DMY K
Sbjct: 223 MVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKC 282
Query: 59 GLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++ FD + KD+ WN ++ + R G + A + QM
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQM 326
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIF--DGLVDKDVVLWNCLIGNY 86
GK++H Y + + L + + T+LIDMYAK G + +F + + D ++WN +IG
Sbjct: 260 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL 319
Query: 87 ARNGLVGEAVYLLQQM 102
A +G + E++ L +M
Sbjct: 320 ASHGFIRESLQLFHKM 335
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
GL T L ++ N +G SLH ++ GL L + LI MY
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
RK+FD + K++V WN ++ YA++G V A + +M
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
K +H I G+ + + +AL+D+YAK G + R++F + DV +WN +I +A
Sbjct: 184 AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFAT 243
Query: 89 NGLVGEAVYLLQQM 102
+GL EA+ + +M
Sbjct: 244 HGLATEAIRVFSEM 257
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 6 LRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGR 65
++ + T + + A D V G+ +H + + V +AL++MY+K G + R
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 66 KIFD-GLV-DKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K+FD GLV +D++ WN +I YA +G EA+ + QM
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 49 TALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
TA++D AK G V R++FD + +++++ WN +I YA+N + EA L Q M
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYAKI--GLVHWGRKIFDGLVDKDVVLWNCLIG 84
+ GKSLHG I+ GL + ALI MY + G + +F+ L KD++ WN +I
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 85 NYARNGLVGEAV 96
+A+ GL +AV
Sbjct: 382 GFAQKGLSEDAV 393
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK- 74
L + D +G+ +H + G S+ V+++LI MY+K G++ RK F + K
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 473
Query: 75 DVVLWNCLIGNYARNGLVGEAVYLLQQM 102
V WN +I YA++GL ++ L QM
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQM 501
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL-VDKDVVLWNCLIGNYAR 88
K +H +++GL + + A+I YA G V +++FDGL KD++ WN +I +++
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 89 NGLVGEAVYLLQQM 102
+ L A L QM
Sbjct: 283 HELKESAFELFIQM 296
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G+SL + + G H+ + T LID Y+ G + RK+FD + ++D + W ++ Y R
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 89 NGLVGEAVYLLQQM 102
+ A L QM
Sbjct: 948 VLDMDSANSLANQM 961
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
+GK +H Y +Q G + + +AL+DMY+K G + +F L K++ WN +I A
Sbjct: 1050 IGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 1109
Query: 88 RNGLVGEAVYLLQQM 102
+G EA+ + +M
Sbjct: 1110 AHGFAQEALKMFAKM 1124
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
GK +HG I G + V AL+++YAK G + + F + +KD+V WN ++ +
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 89 NGLVGEAVYLLQQM 102
+GL +A+ L M
Sbjct: 416 HGLADQALKLYDNM 429
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 48 LTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
LT+ I AK G + R++FDG+ + D V WN ++ +Y+R GL EA+ L Q+
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIG- 59
M + G + T+ + A + + G+ HG I+ G + +V + LID Y+K G
Sbjct: 231 MIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 60 --LVHWGRKIFDGLVDKDVVLWNCLIGNYARN-GLVGEAVYLLQQM 102
++ K+F ++ D+V+WN +I Y+ N L EAV +QM
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 30 KSLHGYCIQIGL-SSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
K +HG I+ + S+ ++V ALI +Y K G + R +FD + + + V +NC+I YA+
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ 424
Query: 89 NGLVGEAVYLLQQM 102
+G EA+ L Q+M
Sbjct: 425 HGHGTEALLLYQRM 438
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
M G + T+ L A+ N +G +H ++ + + V ALI MY++ G
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGE 458
Query: 61 VHWGRKIFDGL-VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ R+IFD + + ++V+ WN +IG YA +G EA+ L M
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM 501
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G T+ +F + + +G+ +HGY I+ GL L V ++L MY + G + G
Sbjct: 86 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 145
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ + +++V WN LI A+NG +YL + M
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHW 63
SG R + T + + + D G+ +H I+IG SS + V+++LI MY+K G +
Sbjct: 186 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGD 245
Query: 64 GRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
K F D+D V+W+ +I Y +G EA+ L M
Sbjct: 246 AAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA- 87
G+ +HG I+ G + + + ALID YAK G + R FD + DK++V WN L+ YA
Sbjct: 335 GRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Query: 88 RNGLVGEAVYL 98
++G + +++L
Sbjct: 395 KDGPICLSLFL 405
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLV--DKDVVLWNCLIGN 85
+GK++H GL ++ V ++L+DMY K V R++FD ++ ++VV W +I
Sbjct: 149 IGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 86 YARNGLVGEAVYLLQ 100
YA+N EA+ L +
Sbjct: 209 YAQNARGHEAIELFR 223
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCI--QIGLSSHLNVLTALIDMYAKIGLV 61
S L +T++I+ PA +H Y + Q L L V ALIDMY+K G +
Sbjct: 344 SHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV--ALIDMYSKCGSI 401
Query: 62 HWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F+G+ +K + WN +IG A +GL A +L Q+
Sbjct: 402 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQI 442
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +HG+ + GL S L + LI +Y K G + R++FD + +D V +N +I Y +
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 89 NGLVGEAVYLLQQM 102
GL+ A L M
Sbjct: 200 CGLIVSARELFDLM 213
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 22 DTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNC 81
D +GK +HGY + + + TAL+DMY K G + IFD + DK V WN
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 82 LIGNYARNGLVGEAVYLLQQM 102
+I A NG +A+ + + M
Sbjct: 295 IISALASNGRPKQALEMFEMM 315
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T++ L A+ + +G+ +H Y + G + TALIDMY+K G + RK+FD +
Sbjct: 253 TIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLL 99
K + WN +I + +G EA+ L
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEEALSLF 340
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+ + T++ L + +G LH I S + V ALIDMYAK G +
Sbjct: 203 GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENA 262
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+F+G+ +DV+ WN +I Y +G EA+ ++M
Sbjct: 263 IGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLS--SHLNVLTALIDMYAKIGLV 61
SGL T++ + + G + + LH +Q S + +L +LIDMY K G +
Sbjct: 212 SGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRM 271
Query: 62 HWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
IF+ + ++VV W+ +I YA NG EA+ +QM
Sbjct: 272 DLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 15 ILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDK 74
I+ AA +F +GK LH +++G + I +Y K G RK+FD ++
Sbjct: 122 IVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPER 181
Query: 75 DVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ WN +IG G EAV + M
Sbjct: 182 KLGSWNAIIGGLNHAGRANEAVEMFVDM 209
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
VG S+HG ++IG + V T+ +D Y K + RK+F + +++ V W L+ Y
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187
Query: 88 RNGLVGEAVYLLQQM 102
++G + EA + M
Sbjct: 188 KSGELEEAKSMFDLM 202
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+ A T L + + GK +HG I+ G + ++++Y G +
Sbjct: 97 GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDA 156
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+K+FD + +++VV+WN +I + +G V ++L +QM
Sbjct: 157 QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM 194
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYAKIG 59
M GL +V A GK +H + + + S + V TAL+DMYAK G
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++F L ++V W LIG YA G +A+ L+++
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL 311
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 26 FVVGKSLHGYCIQIGLS-SHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIG 84
F VGK +H + ++ G+ S +V T ++ +Y + L+ RK+FD + DVV W+ L+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMN 191
Query: 85 NYARNGLVGEAVYLLQQM 102
Y R GL E + + ++M
Sbjct: 192 GYVRCGLGSEGLEVFREM 209
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 38 QIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVY 97
++G +L A+I Y +IG + R++FD + ++VV WN LI YA NG A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 98 LLQQM 102
+ M
Sbjct: 384 FFEDM 388
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 4 SGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIG-LSSHLNVLT----ALIDMYAKI 58
+G T+L L A + GK LH Y ++ +SS + V T ALIDMYAK
Sbjct: 269 AGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 59 GLVHWGRKIFDGLVDKDVVLWNCLI 83
G + ++F G+ D+D+ WN LI
Sbjct: 329 GSIDRAIEVFRGVKDRDLSTWNTLI 353
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYARN 89
K +H ++ G S ++LT L++ IG + + R++FD + + LWN L Y RN
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 90 GLVGEAVYLLQQM 102
L E++ L ++M
Sbjct: 88 QLPFESLLLYKKM 100
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGL 60
MC ++ + TV+ + A G + +G+ ++ + + ++ V A +DM+ K G
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 61 VHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R +F+ + ++VV W+ +I YA NG EA+ L M
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%)
Query: 5 GLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWG 64
G+R + T + ++ + + +GK LH Y +++GL+S++ V +A+++ Y K+ +
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 65 RKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
R+ FD D +VV LI Y + EA+ L + M
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAM 185
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 26 FVVGKSLHGYCIQIGLS-SHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIG 84
F VGK +H + ++ G+ S +V T ++ +Y + L+ RK+FD + DVV W+ L+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMN 191
Query: 85 NYARNGLVGEAVYLLQQM 102
Y R GL E + + ++M
Sbjct: 192 GYVRCGLGSEGLEVFKEM 209
Score = 45.4 bits (106), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 1 MCWSGLRASTSTVLILFPAAGDTWNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYAKIG 59
M G+ +V A GK +H + + + S + V TAL+DMYAK G
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 60 LVHWGRKIFDGLVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+ ++F+ L ++V W LIG YA G +A L ++
Sbjct: 269 CIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI 311
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T L A+ + +VG+ H ++ G + + V +L+ MYA G + +IF +
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
+DVV W ++ Y + G+V A + +M
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEM 209
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 16 LFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKD 75
L A G + +G+ H ++ + V +IDMY K + RK+FD + ++D
Sbjct: 155 LLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERD 214
Query: 76 VVLWNCLIGNYARNGLVGEAVYLLQQM 102
V+ W LI YAR G + A L + +
Sbjct: 215 VISWTELIAAYARVGNMECAAELFESL 241
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
+V+ LF + + HG +++G+ + + V AL+DMY K GLV ++IF+ L
Sbjct: 113 SVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEEL 172
Query: 72 VDKDVVLWNCLI 83
+K VV W ++
Sbjct: 173 EEKSVVSWTVVL 184
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 12 TVLILFPAAGDTWNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGL 71
T + A + F GK +H ++ G + V LI +Y G + RK+FD +
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 72 VDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
++ +V WN +I R G A+ L ++M
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREM 243
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYAR 88
G +H I++G V T+L++MY K G V +F KD++ WN +I AR
Sbjct: 354 GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR 413
Query: 89 NGLVGEAVYLLQQM 102
N E++ + Q+
Sbjct: 414 NSRAVESLAIFNQL 427
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 29 GKSLHGYCIQIGLSSH-LNVLTALIDMYAKIGLVHWGRKIFDGLVDKDVVLWNCLIGNYA 87
G+ +HG I G+S + L V +++DMY ++G+ + +F + D+DVV WNCLI + +
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 88 RNG 90
+G
Sbjct: 212 DSG 214
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 22 DTWNFVVGKSLHGYCI-----------QIGLSSHLNVLTALIDMYAKIGLVHWGRKIFDG 70
D ++F+ +H Y + + + H+ ALI + K G+V R++FD
Sbjct: 337 DCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ 396
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEAVYLLQQM 102
DKD+ WN +I YA++ A++L ++M
Sbjct: 397 THDKDIFSWNAMISGYAQSLSPQLALHLFREM 428