Miyakogusa Predicted Gene

Lj0g3v0146479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146479.1 Non Chatacterized Hit- tr|I1JG18|I1JG18_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5582
PE=,81.32,0,Neurochondrin,NULL; NEUROCHONDRIN-RELATED,NULL;
NEUROCHONDRIN,Neurochondrin; seg,NULL,CUFF.8942.1
         (376 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32050.1 | Symbols:  | neurochondrin family protein | chr4:15...   390   e-108

>AT4G32050.1 | Symbols:  | neurochondrin family protein |
           chr4:15496620-15500717 FORWARD LENGTH=618
          Length = 618

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/359 (56%), Positives = 259/359 (72%), Gaps = 8/359 (2%)

Query: 12  PAERLQALILAESVISMYGEDWLIRQVSTNDAQDPTPADMCLLLVLEQSRVEIAVLLNEL 71
           P+E+L ALILAE+++S+ GE WL+  V   +     PAD CLLLVLE S VEI+VLLN+L
Sbjct: 261 PSEKLHALILAENMMSILGEKWLLGGVKLPNVD--IPADRCLLLVLESSHVEISVLLNDL 318

Query: 72  AYLKYEAPQDTSSTAEAYSLKRQNVVVAYSLVEKIIKLVSNVGENDGNLLDEGTFTKLIQ 131
           AY KYEAP+D +STAE   LK++ + + +SLVEKIIK +S+ GEN+G L DE  F K+I+
Sbjct: 319 AYKKYEAPKD-NSTAEDILLKQRYLPIVFSLVEKIIKYISSAGENEGTLSDEAVFQKVIK 377

Query: 132 QLNETVAVILEYLEDAKEHGQKKGDDLLASVRIIGSYLAEAPLACQEKVKDLLGYMLSVE 191
            LNETV  + EYL DAKEHG KKG DLLASVR+IGSYLAE P+AC+E+V+DLL YMLSV+
Sbjct: 378 ILNETVGAVFEYLRDAKEHGIKKGTDLLASVRVIGSYLAETPVACKEQVQDLLDYMLSVK 437

Query: 192 GEDEQRPFYSVCFLLPMLCQITMKVEGCKALASCGELKAVLDCLSNLIGSNGYTVEDSSC 251
           GEDE  PF S CFLLPMLCQITM  EGCK LA      AV++CL  LI   G +V++   
Sbjct: 438 GEDESSPFLSTCFLLPMLCQITMNAEGCKLLAYSRGDVAVVECLIKLIERCGESVDEDRS 497

Query: 252 IFLACDTIMNLLLKKDKVQLTLDGSFFADLVKALAYWSENTDDXXXXXXXXXICALIFDF 311
           IFLACDTIMN+LLK++++    + S FA L+KALAYW++ ++D         IC+LIFDF
Sbjct: 498 IFLACDTIMNILLKREEIS-PPEISTFASLLKALAYWADGSNDHSVVMMAASICSLIFDF 556

Query: 312 TSEEALLNQPDFNHSTLSSLYQLIARCLASSEQDTETDMDLSEIISAGFSRWAHRYPQI 370
           TSE+AL      + S+L SL +L+ R L+SS QD     DL EII AG+SRW +R+P I
Sbjct: 557 TSEDAL----QLSRSSLDSLARLVTRSLSSSGQDMSDTADLLEIIRAGYSRWINRFPTI 611