Miyakogusa Predicted Gene

Lj0g3v0146189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146189.1 Non Chatacterized Hit- tr|I1LNT9|I1LNT9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40241
PE,30,5e-16,seg,NULL,CUFF.8911.1
         (267 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25170.1 | Symbols:  | Uncharacterised conserved protein (UCP...    71   9e-13
AT4G25170.2 | Symbols:  | Uncharacterised conserved protein (UCP...    65   6e-11
AT5G61490.1 | Symbols:  | Uncharacterised conserved protein (UCP...    52   3e-07

>AT4G25170.1 | Symbols:  | Uncharacterised conserved protein
           (UCP012943) | chr4:12909740-12911389 FORWARD LENGTH=344
          Length = 344

 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 38/184 (20%)

Query: 82  DSVFGVVPSQWEVEDAVSALQEFIQAVAVSS------SSTHEQFSGSYDP---------- 125
           DS+FG VPS  EV+DAVSALQ+   A + S           E   G+  P          
Sbjct: 116 DSLFGSVPSVDEVQDAVSALQQVFDASSYSQLVRDKYECYPENGGGNQSPIATGMVHQVP 175

Query: 126 ------------------RIVHSQGYRRLHDALQLLQADPAIKRLVISLSSDNAVWDAVM 167
                             R +    Y ++++A  LL+ +P+++++V+SLSSD AVW+AVM
Sbjct: 176 SFGSDSDWMEPSMHLCHSRTLKPHAYDQVYNAFDLLRTEPSVQKMVVSLSSDKAVWEAVM 235

Query: 168 SHVLHQKLPELPDSGKYRRPQISE----QNEFGLYILNWIRDIIKGKILELIESFMSLLS 223
           ++ + +++ +L ++G  +  + SE    +N      + W+ D    K  E+      +++
Sbjct: 236 NNDVVREIRDLYNNGISQDEENSEDTPRENNAATDFIKWVFDNTMVKATEVFVKITKVVT 295

Query: 224 DLFQ 227
           +LF 
Sbjct: 296 ELFN 299


>AT4G25170.2 | Symbols:  | Uncharacterised conserved protein
           (UCP012943) | chr4:12909740-12911389 FORWARD LENGTH=359
          Length = 359

 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 53/199 (26%)

Query: 82  DSVFGVVPSQWEVEDAVSALQEFI-----------QAVAVSSSSTH----------EQFS 120
           DS+FG VPS  EV+DAVSALQ+ +           Q V  +SS +           E   
Sbjct: 116 DSLFGSVPSVDEVQDAVSALQQSLKLFQLCLRDPTQLVFDASSYSQLVRDKYECYPENGG 175

Query: 121 GSYDP----------------------------RIVHSQGYRRLHDALQLLQADPAIKRL 152
           G+  P                            R +    Y ++++A  LL+ +P+++++
Sbjct: 176 GNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSRTLKPHAYDQVYNAFDLLRTEPSVQKM 235

Query: 153 VISLSSDNAVWDAVMSHVLHQKLPELPDSGKYRRPQISE----QNEFGLYILNWIRDIIK 208
           V+SLSSD AVW+AVM++ + +++ +L ++G  +  + SE    +N      + W+ D   
Sbjct: 236 VVSLSSDKAVWEAVMNNDVVREIRDLYNNGISQDEENSEDTPRENNAATDFIKWVFDNTM 295

Query: 209 GKILELIESFMSLLSDLFQ 227
            K  E+      ++++LF 
Sbjct: 296 VKATEVFVKITKVVTELFN 314


>AT5G61490.1 | Symbols:  | Uncharacterised conserved protein
           (UCP012943) | chr5:24732642-24733666 FORWARD LENGTH=260
          Length = 260

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 34/41 (82%)

Query: 135 RLHDALQLLQADPAIKRLVISLSSDNAVWDAVMSHVLHQKL 175
           RL+DA  + Q DP+++R+V+SL+SD AVWDAVM++ + ++L
Sbjct: 131 RLYDAFHVFQTDPSVQRMVMSLTSDKAVWDAVMNNEVVREL 171