Miyakogusa Predicted Gene
- Lj0g3v0145749.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0145749.4 tr|B9I9J7|B9I9J7_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_245595
PE=4,24.59,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopepti,CUFF.8879.4
(491 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 8e-44
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 174 1e-43
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 6e-41
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 1e-40
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 161 8e-40
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 9e-39
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 155 5e-38
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 7e-38
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 5e-37
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 5e-37
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 152 5e-37
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 8e-37
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 149 5e-36
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 145 5e-35
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 6e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 6e-34
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 138 8e-33
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 3e-32
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 9e-32
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 9e-32
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 1e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 4e-31
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 3e-30
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 6e-30
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 7e-30
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 8e-30
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 127 2e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 7e-29
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 125 8e-29
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 121 1e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 120 2e-27
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 120 2e-27
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 117 2e-26
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 117 2e-26
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 116 4e-26
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 4e-25
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 109 3e-24
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 109 4e-24
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 108 6e-24
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 102 5e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 95 1e-19
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 87 2e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 87 4e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 86 6e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 84 2e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 83 5e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 82 6e-16
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 80 5e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 79 1e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 77 3e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 4e-14
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 73 5e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 70 3e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 70 4e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 4e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 67 2e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 64 2e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 64 3e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 62 7e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 62 9e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 60 4e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 5e-09
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 58 1e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 58 2e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 57 2e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 57 3e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 57 3e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 56 6e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 55 8e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 54 2e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 54 2e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 54 3e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 53 5e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 52 8e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 2e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 2e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 2e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 236/485 (48%), Gaps = 44/485 (9%)
Query: 8 RHCPRSAAFLPPRLALRHFTSSTDETD----AELVSKILLQHHNPFHAMESSLQLHGIXX 63
R C +S FL RL ++SS D A+ +SK+L+ +P ++S+L G+
Sbjct: 47 RFCCKS--FLSARL----YSSSEQVRDVADVAKNISKVLMS--SPQLVLDSALDQSGLRV 98
Query: 64 XXXXXXXXXXXXKHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLIT 123
++ + F +++ + S ++H++I++ AK+RQ+ L W LI
Sbjct: 99 SQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLIN 158
Query: 124 EMDQRSLTPNPSTFLVLIRRLVSDTKTTSE-----------------HFTVLLDTLCKYG 166
M ++ + N TF +++R+ K F LL LCK
Sbjct: 159 AMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSK 217
Query: 167 YVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTY 226
V+ A EVF N R RF PD K Y++L+ GW K + A+ EM++ G P++VTY
Sbjct: 218 NVRKAQEVFE-NMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTY 275
Query: 227 NVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQL 286
+++++ +C+ + +A + M +P +S+++H Y ++ +
Sbjct: 276 SIMVDILCKA----------GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEE 325
Query: 287 SLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
++D F M+ G+ VA + S+I R+++ + EM GV+P + + N +
Sbjct: 326 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
R + D A +F+KM + +C P A TY ++++MF + + ++W+ M++ GV
Sbjct: 386 HLIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
P + +++LI+GLCE + ++AC EMIE G P VTF L + LI+ + + L
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFL 503
Query: 467 KKKLD 471
+K++
Sbjct: 504 NEKMN 508
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
+V +F IV+ Y+RA K ++ F +M++ + P + + ++ L + A+ +F
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
+ M R +P + TY+ + + + A ++F++M + G C P TY +++ + K
Sbjct: 227 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG-CHPDIVTYSIMVDILCK 284
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
A + I R M S P +Y++L+H + EA F+EM G
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLK 487
F +L +++ ++ R+ K++ + ++ S+ N L+
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 212/453 (46%), Gaps = 44/453 (9%)
Query: 34 DAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFNYAKSLP 93
+ E + +IL HH+ +E +L GI + F +A P
Sbjct: 66 EVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQP 125
Query: 94 NPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPN---PSTFLVLIRRLVSDTKT 150
S+ ++ ++K+RQF W LI EM R P P F+VL+RR S
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMV 183
Query: 151 TSEH-----------------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTV 193
F LLD LCK G VK A++VF + +F P+++ +T
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE--KFPPNLRYFTS 241
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
L+YGWC+ G++ A+ L +M E G+EP++V + LL+G + DA
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA----------DAY 291
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKP-QLSLDKFRMMKEQGICPTVATYTSVIKC 312
+ ++MR+RG EP+V +++++ R K ++ F M+ G + TYT++I
Sbjct: 292 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
G ++ + D+M + GV P VTY + ++ + L+L +KMK G C P
Sbjct: 352 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG-CHP 410
Query: 373 TAHTYGVLLQMFLKADMIGVVKE---IWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
Y V++++ K +G VKE +W +M+ +G+ P +D + ++I+G + EAC
Sbjct: 411 DLLIYNVVIRLACK---LGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEAC 467
Query: 430 QFFVEMIEKGFL--PQKVTFETLYRGLIQSDML 460
F EM+ +G PQ T ++L L++ D L
Sbjct: 468 NHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 36/415 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSS---FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
+L+ FN+A S + H S ++ +ID KVRQFDLAW LI M R++ + TF
Sbjct: 133 SLAFFNWATSRDD--YDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFT 190
Query: 139 VLIRRLV-SDTKTTSEH----------------FTVLLDTLCKYGYVKLAAEVFNGNKRH 181
+LIRR V + + + H F++++ L + A F+ K
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD- 249
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
RF PDV +YT L+ GWC+ G + A+ EM GIEPNV TY+++++ +CR
Sbjct: 250 -RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC----- 303
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
I A VF +M + G P+ +F+ ++ V+ +A + + L + MK+ G P
Sbjct: 304 -----GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 358
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
TY +I+ LE+A + + M++ A T+N F+ ++D + A +++
Sbjct: 359 DTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMY 418
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
KM E C P TY +L++MF+ + +V ++ ++M + V P+++ Y LL+ C
Sbjct: 419 SKMME-AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477
Query: 422 RKKWREACQFFVEMI-EKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
W A + F EM+ EK P +E + L ++ L+ L +K+ ++ +
Sbjct: 478 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 201/456 (44%), Gaps = 31/456 (6%)
Query: 38 VSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFNYAKSLPNPPL 97
+S++L H NP +E +L + K+ A F +A+ +P+
Sbjct: 41 ISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAH 100
Query: 98 SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE---- 153
S S+H+L++ + +QF L W + E + + S ++ R S SE
Sbjct: 101 SLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRA 160
Query: 154 -----HFTV---------LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
F + LL +LC +V A E F G + P K Y++L+ GW
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF-GKAKGFGIVPSAKTYSILVRGWA 219
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
++ A+ +EM+ER +++ YN LL+ +C+ + K+F EM
Sbjct: 220 RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS----------GDVDGGYKMFQEM 269
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
G++PD SF+I +H Y A + MK + P V T+ +IK L ++
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
+DA L DEM++ G +P TYN + + + A KL +M C P HTY +
Sbjct: 330 DDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-CLPDRHTYNM 388
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK-KWREACQFFVEMIEK 438
+L++ ++ EIW M E P + YT++IHGL +K K EAC++F MI++
Sbjct: 389 VLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDE 448
Query: 439 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
G P T E L L+ + L K++ S
Sbjct: 449 GIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 116/272 (42%), Gaps = 30/272 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ L+D + K D +++ EM L P+ +F + I
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH------------------ 286
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C G V A +V + KR+ P+V + +I CK +V+ A L+EM+++G
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRY-DLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+ TYN ++ C H E + A K+ M PD ++++VL + R
Sbjct: 346 PDTWTYNSIMAYHCD----HCE------VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA-SCGRLEDAEGLFDEMVRSGVSPCAV 339
+ + + + M E+ PTVATYT +I L G+LE+A F+ M+ G+ P +
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYST 455
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
T G D L KM+ CS
Sbjct: 456 TVEMLRNRLVGWGQMDVVDVLAGKMERSSSCS 487
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 219/470 (46%), Gaps = 46/470 (9%)
Query: 28 SSTDETDAELVSKILLQHHN--PFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSL 85
++ +TD +S LL++ + P ++ES+L GI + S+
Sbjct: 63 NTVSKTDLSTISN-LLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSV 121
Query: 86 FNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLI---TEMDQRSLTPNPSTFLVLIR 142
F +A+ P LS S F +++++ K R+F++AW L+ D+ S + TF+VLIR
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 143 RL---------------------VSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFN--GNK 179
R V + T VLLD LCK G+V+ A+ G
Sbjct: 182 RYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGT 241
Query: 180 RHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSL 239
+ P V+++ +L+ GW + +++ A+ EM ++P VVTY L+ G CR
Sbjct: 242 MDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM--- 298
Query: 240 HPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
R ++ A +V +EM+ +E + F+ ++ A + +L MM+ +
Sbjct: 299 -------RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALG---MMERFFV 348
Query: 300 C---PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
C PT+ TY S++K G L A + M+ GV P TYN FFK + +
Sbjct: 349 CESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEE 408
Query: 357 ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
+ L+ K+ E G SP TY ++L+M + + + ++ ++MK G+ PDL T+LI
Sbjct: 409 GMNLYFKLIEAG-HSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
H LC + EA + F + +G +PQ +TF+ + GL M +RL
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 217/467 (46%), Gaps = 43/467 (9%)
Query: 27 TSSTDET-DAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSL 85
S+ D + DAE + KIL + + +E+ L + + +ALS+
Sbjct: 57 VSANDASQDAERICKILTKFTDS--KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSV 114
Query: 86 FNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV 145
F +A++ + S+++ LI+++ K++QF L W L+ +M + L + TF ++ RR
Sbjct: 115 FKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLL-SKETFALISRRYA 173
Query: 146 SDTKTT-----------------SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDV 188
K S F +LDTL K V A +VF+ K+ RF PD+
Sbjct: 174 RARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK-RFEPDI 232
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT 248
K YT+L+ GW + + EM + G EP+VV Y +++N C+ +++E
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA------KKYEEA 286
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
IR F+EM +R +P F +++ K +L+ F K G TY +
Sbjct: 287 IR----FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
++ R+EDA DEM GV P A TY+ + + A ++++ M
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS--- 399
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
C PT TY ++++MF + + + +IW +MK GV P + +++ LI LC K EA
Sbjct: 400 -CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQ-------SDMLRTWRRLKK 468
C++F EM++ G P F L + L+ +D++ RL+K
Sbjct: 459 CEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 189/400 (47%), Gaps = 34/400 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMD--QRSLTPNPSTFLV 139
A F +A S S +++ ++D + K R FDL W+L+ EM+ + S T
Sbjct: 149 AYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSK 208
Query: 140 LIRRLVSD------------------TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
++RRL KT + L+D L K ++ A EVF K
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFL--KLF 266
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
PD + + +LI+G+CK + + A++ ++ M P+VVTY + C+
Sbjct: 267 DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK------ 320
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
E R +++ +EMRE G P+V +++IV+H ++ + +L + MKE G P
Sbjct: 321 ----EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVP 376
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
Y+S+I L+ GR +DA +F++M GV + YN + AL+L
Sbjct: 377 DAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
Query: 362 KKMK-EDG-LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
K+M+ E+G CSP TY LL+M + ++ + M ++ V D+ Y LLI GL
Sbjct: 437 KRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGL 496
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
C K EAC FF E + KG +P+ T + L L + +M
Sbjct: 497 CMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNM 536
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 166/342 (48%), Gaps = 30/342 (8%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTK---------T 150
SSF L ID A++ W LI M + P+P TF ++ R S K
Sbjct: 92 SSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLN 151
Query: 151 TSEH--------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
EH F +LD LCK V+ A E+F + RF+ D Y V++ GWC +
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIK 209
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
R A L EMVERGI PN+ TYN +L G R IR A + F EM++R
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA----------GQIRHAWEFFLEMKKR 259
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
E DV +++ V+H + A + + + + F M +G+ P+VATY ++I+ L +E+A
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+F+EMVR G P TYN + + +L ++M+ +G C P TY ++++
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG-CEPNFQTYNMMIR 378
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
+ + + ++ M P+LD Y +LI G+ RK+
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 123/256 (48%), Gaps = 31/256 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++++++ +++ A +++ EM +R + PN +T+ +L
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY------------------NTMLK 238
Query: 161 TLCKYGYVKLAAEVF-NGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+ G ++ A E F KR C DV YT +++G+ G ++ A++ +EM+ G+
Sbjct: 239 GFFRAGQIRHAWEFFLEMKKRDCEI--DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
P+V TYN ++ +C+K + +A +F+EM RG EP+VT++++++
Sbjct: 297 LPSVATYNAMIQVLCKK----------DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
A + + + M+ +G P TY +I+ + C +E A GLF++M P
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 340 TYNCFFKEYRGRKDAD 355
TYN RK ++
Sbjct: 407 TYNILISGMFVRKRSE 422
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A K+F M E G D+ SF+ +L V ++ + + + + FR ++ + TV TY ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILN 203
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
R A + EMV G++P TYN K + A + F +MK+ C
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CE 262
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
TY ++ F A I + ++ +M GV P + Y +I LC++ A
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 432 FVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQL 486
F EM+ +G+ P T+ L RGL + L ++++ E FQ Y +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE--PNFQTYNM 375
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 50/404 (12%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTP---NPSTFL 138
A + F +A S +H +I + K+R+FD AW LI EM R +P N T L
Sbjct: 144 AFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLL 201
Query: 139 VLIRRLVS-----------------DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
++IR+ + + + F LL LC+Y V A + NK
Sbjct: 202 IMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK 261
Query: 182 CRFNPDVKMYTVLIYGWCK-LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH 240
F D K + +++ GWC +G A+ EM G++ +VV+Y+ +++ + SL+
Sbjct: 262 YPF--DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLN 319
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GI 299
K+FD M++ IEPD ++ V+H ++A + + + M+E+ GI
Sbjct: 320 K----------VLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGI 369
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
P V TY S+IK L + E+A+ +FDEM+ G+ P TY+ F + R + +
Sbjct: 370 EPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILR---TGEEVFE 426
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
L KM++ G C PT TY +L++ + V +W +MKE VGPDL Y ++IHGL
Sbjct: 427 LLAKMRKMG-CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTW 463
K EA ++ EM +KG P + DM+++W
Sbjct: 486 FLNGKIEEAYGYYKEMKDKGMRPNENV----------EDMIQSW 519
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 185/386 (47%), Gaps = 37/386 (9%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
+S +AL LF + N S + ++ID++ K FD A L EM+ + + + T+
Sbjct: 225 NSALALDLFRKMEE-RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 138 LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
LI L +D K K+ E+ N PDV ++ LI
Sbjct: 284 SSLIGGLCNDGKWDDG--------------AKMLREMIGRN-----IIPDVVTFSALIDV 324
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ K G++ A+ NEM+ RGI P+ +TYN L++G C++ LH +A+++FD
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH----------EANQMFD 374
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
M +G EPD+ ++SI+++ Y +A + + FR + +G+ P TY +++ G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+L A+ LF EMV GV P VTY + + AL++F+KM++ + + Y
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM-TLGIGIY 493
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
+++ A + ++ + + GV PD+ Y ++I GLC++ EA F +M E
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 438 KGFLPQKVTFETLYR------GLIQS 457
G P T+ L R GLI S
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISS 579
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 180/408 (44%), Gaps = 52/408 (12%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE-HFTVLLDTLC 163
L+D M +++Q + T ++ L S LVLI R+V E + +L+ LC
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 164 KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNV 223
K G LA ++F + V Y+++I CK G + A S NEM +GI+ +V
Sbjct: 222 KSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 224 VTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
VTY+ L+ G+C + D K+ EM R I PDV +FS ++ V+ + K
Sbjct: 281 VTYSSLIGGLCN----------DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIK--CLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ + + M +GI P TY S+I C +C L +A +FD MV G P VTY
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC--LHEANQMFDLMVSKGCEPDIVTY 388
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
+ Y K D ++LF+++ GL P TY L+ F ++ + KE++++M
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 402 ESGVGPD-----------------------------------LDLYTLLIHGLCERKKWR 426
GV P + +Y ++IHG+C K
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
+A F + +KG P VT+ + GL + L L +K+ E+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 175/395 (44%), Gaps = 41/395 (10%)
Query: 82 ALSLFN---YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
A+ LF ++ LP P F+ L +A+ +Q+DL M+ + + T
Sbjct: 54 AIDLFESMIQSRPLPTPI----DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM- 108
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
T++++ C+ + A V G + PD ++ L+ G+
Sbjct: 109 -----------------TIMINCYCRKKKLLFAFSVL-GRAWKLGYEPDTITFSTLVNGF 150
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
C GRV A + ++ MVE P++VT + L+NG+C K + +A + D
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK----------GRVSEALVLIDR 200
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M E G +PD ++ VL+ ++ L+LD FR M+E+ I +V Y+ VI L G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
+DA LF+EM G+ VTY+ D K+ ++M + P T+
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII-PDVVTFS 319
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
L+ +F+K + KE++ +M G+ PD Y LI G C+ EA Q F M+ K
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 439 GFLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 469
G P VT+ L ++ D +R +R + K
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 164/362 (45%), Gaps = 36/362 (9%)
Query: 82 ALSLFNYA--KSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV 139
ALSLFN K + +++SS LI + ++D +++ EM R++ P+ TF
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSS---LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 140 LIRRLVSDTKTTSEH-----------------FTVLLDTLCKYGYVKLAAEVFN-GNKRH 181
LI V + K + L+D CK + A ++F+ +
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
C PD+ Y++LI +CK RV+ E+ +G+ PN +TYN L+ G C+ L+
Sbjct: 381 CE--PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
A ++F EM RG+ P V ++ I+L + +L+ F M++ +
Sbjct: 439 ----------AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
+ Y +I + + +++DA LF + GV P VTYN + A LF
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
+KMKEDG C+P TY +L++ L + E+ +MK G D ++I L +
Sbjct: 549 RKMKEDG-CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Query: 422 RK 423
R+
Sbjct: 608 RR 609
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 36/241 (14%)
Query: 249 IRDADKVFDEMRE-----------------------------------RGIEPDVTSFSI 273
+ DA +F+ M + GIE D+ + +I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
+++ Y R K + + G P T+++++ GR+ +A L D MV
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
P VT + + AL L +M E G P TYG +L K+ +
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALA 229
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+++R M+E + + Y+++I LC+ + +A F EM KG VT+ +L G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 454 L 454
L
Sbjct: 290 L 290
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 203/429 (47%), Gaps = 31/429 (7%)
Query: 28 SSTDETDAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFN 87
SST+ + E V K++ + ME+ L + +H K A F
Sbjct: 124 SSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFC 183
Query: 88 YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD 147
+A +++ ++ +AK RQF+ ++ EM + L TF + ++ +
Sbjct: 184 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAA 242
Query: 148 T-----------------KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKM 190
K E LLD+L + K A +F+ K RF P++
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE--RFTPNMMT 300
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
YTVL+ GWC++ + A N+M+++G++P++V +NV+L G+ R R
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS----------RKKS 350
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
DA K+F M+ +G P+V S++I++ + + + +++ F M + G+ P A YT +I
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
+ +L+ L EM G P TYN K +K + A +++ KM ++ +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI- 469
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
P+ HT+ ++++ + A + + +W +M + G+ PD + YT+LI GL K REAC+
Sbjct: 470 EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACR 529
Query: 431 FFVEMIEKG 439
+ EM++KG
Sbjct: 530 YLEEMLDKG 538
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 15/307 (4%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
F D + Y ++ K + ET S L EM +G+ + T+ + + K +E
Sbjct: 191 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKE 244
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
R + A +F+ M++ + V + + +L RA + + F +KE+ P +
Sbjct: 245 R-----KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNM 298
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY-RGRKDADSALKLFK 362
TYT ++ L +A ++++M+ G+ P V +N + R RK +D A+KLF
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD-AIKLFH 357
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
MK G C P +Y ++++ F K + E + DM +SG+ PD +YT LI G +
Sbjct: 358 VMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQ 482
KK + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTF 476
Query: 483 NYQLKPY 489
N +K Y
Sbjct: 477 NMIMKSY 483
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 30/287 (10%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
K A LF+ K P + ++ +L++ +VR A ++ +M + L P+
Sbjct: 280 GKEAQVLFDKLKERFTPNMM--TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 337
Query: 139 VLIRRLVSDTKTTS-----------------EHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
V++ L+ K + +T+++ CK ++ A E F+ +
Sbjct: 338 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD-DMVD 396
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
PD +YT LI G+ +++T L EM E+G P+ TYN L+ + + P
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK--MP 454
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
E A +++++M + IEP + +F++++ Y A ++ + M ++GICP
Sbjct: 455 EH--------ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY 348
+YT +I+ L G+ +A +EM+ G+ + YN F ++
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 206/443 (46%), Gaps = 43/443 (9%)
Query: 24 RHFTSSTDE--TDAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKI 81
R S DE +D E +IL + H+ +E +L G+ +
Sbjct: 70 RTKNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNL 129
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPN---PSTFL 138
F +A P S + ++ ++K+RQF W LI EM R P P F+
Sbjct: 130 GYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFV 187
Query: 139 VLIRRLVSD--TKTTSEH---------------FTVLLDTLCKYGYVKLAAEVFNGNKRH 181
VL++R S K E F LLD LCK+G VK AA++F +
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-- 245
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
RF +++ +T L+YGWC++G++ A+ L +M E G EP++V Y LL+G +
Sbjct: 246 MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA- 304
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
DA + +MR RG EP+ +++++ + + + ++ F M+
Sbjct: 305 ---------DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V TYT+++ G+++ + D+M++ G+ P +TY + ++ + L+L
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE---IWRDMKESGVGPDLDLYTLLIHG 418
+KM++ P Y V++++ K +G VKE +W +M+E+G+ P +D + ++I+G
Sbjct: 416 EKMRQIEY-HPDIGIYNVVIRLACK---LGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Query: 419 LCERKKWREACQFFVEMIEKGFL 441
L + EA F EM+ +G
Sbjct: 472 LASQGCLLEASDHFKEMVTRGLF 494
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 161/352 (45%), Gaps = 66/352 (18%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCK 164
L+ A + A+ L+ +M +R PN + + TVL+ LCK
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCY------------------TVLIQALCK 334
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
++ A +VF +R+ DV YT L+ G+CK G+++ L++M+++G+ P+ +
Sbjct: 335 VDRMEEAMKVFVEMERY-ECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
TY ++ V+ +E FE + ++ ++MR+ PD+ +++V+ + + +
Sbjct: 394 TYMHIM------VAHEKKESFEECL----ELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
+ ++ + M+E G+ P V T+ +I LAS G L +A F EMV G+ +
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVS------ 497
Query: 345 FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
T +LL LK + + K++W + G
Sbjct: 498 ----------------------------QYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
Query: 405 VGPDLDL--YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+L++ +T+ IH L + +EAC + +EMIE F+PQ TF L +GL
Sbjct: 530 -ACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGL 580
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
K+ C ++ Y S++K L+ + GL +EM + +P + F + A
Sbjct: 139 KQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKE--NPQLIEPELFVVLVQRFASA 196
Query: 355 D---SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDL 411
D A+++ +M + G P + +G LL K + +++ DM+ +L
Sbjct: 197 DMVKKAIEVLDEMPKFGF-EPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRY 254
Query: 412 YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS-------DMLRTWR 464
+T L++G C K EA V+M E GF P V + L G + D+LR R
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 465 R 465
R
Sbjct: 315 R 315
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 202/429 (47%), Gaps = 31/429 (7%)
Query: 28 SSTDETDAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFN 87
SST+ + E V K++ + ME+ L + +H K A F
Sbjct: 124 SSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFC 183
Query: 88 YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD 147
+A + +++ ++ +AK RQF+ ++ EM + L TF + ++ +
Sbjct: 184 WAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAA 242
Query: 148 T-----------------KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKM 190
K E LLD+L + K A +F+ K RF P++
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE--RFTPNMMT 300
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
YTVL+ GWC++ + A N+M++ G++P++V +NV+L G+ R +
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS---------- 350
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
DA K+F M+ +G P+V S++I++ + + + +++ F M + G+ P A YT +I
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
+ +L+ L EM G P TYN K +K + +++ KM ++ +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI- 469
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
P+ HT+ ++++ + A + + +W +M + G+ PD + YT+LI GL K REAC+
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 529
Query: 431 FFVEMIEKG 439
+ EM++KG
Sbjct: 530 YLEEMLDKG 538
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 30/287 (10%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
K A LF+ K P + ++ +L++ +VR A ++ +M L P+
Sbjct: 280 GKEAQVLFDKLKERFTPNMM--TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 337
Query: 139 VLIRRLVSDTKTTS-----------------EHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
V++ L+ K + +T+++ CK ++ A E F+ +
Sbjct: 338 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD-DMVD 396
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
PD +YT LI G+ +++T L EM E+G P+ TYN L+ + + P
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK--MP 454
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
E +++++M + IEP + +F++++ Y A ++ + M ++GICP
Sbjct: 455 EH--------GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY 348
+YT +I+ L S G+ +A +EM+ G+ + YN F ++
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 15/302 (4%)
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT 248
+ Y ++ K + ET S L EM +G+ + T+ + + K +ER
Sbjct: 196 RTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKER---- 245
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+ A +F+ M++ + V + + +L RA + + F +KE+ P + TYT
Sbjct: 246 -KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY-RGRKDADSALKLFKKMKED 367
++ L +A ++++M+ G+ P V +N + R K +D A+KLF MK
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD-AIKLFHVMKSK 362
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
G C P +Y ++++ F K + E + DM +SG+ PD +YT LI G +KK
Sbjct: 363 GPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLK 487
+ EM EKG P T+ L + + M R+ K+ + I N +K
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 488 PY 489
Y
Sbjct: 482 SY 483
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 31/429 (7%)
Query: 28 SSTDETDAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFN 87
SST+ + E V K++ + ME+ L + +H K A F
Sbjct: 123 SSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFC 182
Query: 88 YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD 147
+A +++ ++ +AK RQF+ ++ EM + L TF + ++ +
Sbjct: 183 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAA 241
Query: 148 T-----------------KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKM 190
K E LLD+L + K A +F+ K RF P++
Sbjct: 242 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE--RFTPNMMT 299
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
YTVL+ GWC++ + A N+M++ G++P++V +NV+L G+ R +
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS---------- 349
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
DA K+F M+ +G P+V S++I++ + + + +++ F M + G+ P A YT +I
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
+ +L+ L EM G P TYN K +K + +++ KM ++ +
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI- 468
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
P+ HT+ ++++ + A + + +W +M + G+ PD + YT+LI GL K REAC+
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 528
Query: 431 FFVEMIEKG 439
+ EM++KG
Sbjct: 529 YLEEMLDKG 537
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 137/307 (44%), Gaps = 15/307 (4%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
F D + Y ++ K + ET S L EM +G+ + T+ + + K +E
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKE 243
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
R + A +F+ M++ + V + + +L RA + + F +KE+ P +
Sbjct: 244 R-----KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNM 297
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY-RGRKDADSALKLFK 362
TYT ++ L +A ++++M+ G+ P V +N + R K +D A+KLF
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD-AIKLFH 356
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
MK G C P +Y ++++ F K + E + DM +SG+ PD +YT LI G +
Sbjct: 357 VMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQ 482
KK + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 475
Query: 483 NYQLKPY 489
N +K Y
Sbjct: 476 NMIMKSY 482
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 30/287 (10%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
K A LF+ K P + ++ +L++ +VR A ++ +M L P+
Sbjct: 279 GKEAQVLFDKLKERFTPNMM--TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 336
Query: 139 VLIRRLVSDTKTTS-----------------EHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
V++ L+ K + +T+++ CK ++ A E F+ +
Sbjct: 337 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD-DMVD 395
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
PD +YT LI G+ +++T L EM E+G P+ TYN L+ + + P
Sbjct: 396 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK--MP 453
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
E +++++M + IEP + +F++++ Y A ++ + M ++GICP
Sbjct: 454 EH--------GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY 348
+YT +I+ L S G+ +A +EM+ G+ + YN F ++
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 552
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 192/393 (48%), Gaps = 32/393 (8%)
Query: 84 SLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRR 143
S FN KS L SF +LI + + + ++ L+ E+ + +PN V+I
Sbjct: 150 SFFNENKS--KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPN-----VVI-- 200
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+T L+D CK G ++ A ++F + + + YTVLI G K G
Sbjct: 201 -----------YTTLIDGCCKKGEIEKAKDLFFEMGK-LGLVANERTYTVLINGLFKNGV 248
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ +M E G+ PN+ TYN ++N +C+ + +DA +VFDEMRERG
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK----------DGRTKDAFQVFDEMRERG 298
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+ ++ +++ ++ R K + MK GI P + TY ++I G+L A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
L ++ G+SP VTYN + + D A K+ K+M+E G+ P+ TY +L+
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI-KPSKVTYTILIDT 417
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
F ++D + ++ M+E G+ PD+ Y++LIHG C + + EA + F M+EK P
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 444 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
+V + T+ G + +L K+++E+ ++
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 156/332 (46%), Gaps = 29/332 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
++ +LI+ + K +++ +M + + PN T+ ++ +L D +T
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ L+ LC+ + A +V + K NP++ Y LI G+C +G+
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCGVGK 353
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A S ++ RG+ P++VTYN+L++G CRK A K+ EM ERG
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK----------GDTSGAAKMVKEMEERG 403
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
I+P +++I++ ++R+ + ++ M+E G+ P V TY+ +I G++ +A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
LF MV P V YN Y + ALKL K+M+E L +P +Y ++++
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL-APNVASYRYMIEV 522
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
K + + M +SG+ P + +L+
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 195/426 (45%), Gaps = 54/426 (12%)
Query: 83 LSLFNYAKSLPNPPLSHS------SFHLLID-TMAKVRQFDLAWQLITEMDQRSLTPNPS 135
LSL + A S+ + +H S++ ++D T+ R A + EM + ++PN
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG-NKRHCRFNPDVKMYTVL 194
T+ +LIR C G + +A +F+ + C P+V Y L
Sbjct: 207 TYNILIR------------------GFCFAGNIDVALTLFDKMETKGCL--PNVVTYNTL 246
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRK-----VSLHPEERFERTI 249
I G+CKL +++ L M +G+EPN+++YNV++NG+CR+ VS E R
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 306
Query: 250 RDADKVFD--------------------EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
+ ++ EM G+ P V +++ ++H +A +++
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
M+ +G+CP TYT+++ + G + +A + EM +G SP VTYN +
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
+ A+ + + MKE GL SP +Y +L F ++ + + R+M E G+ PD
Sbjct: 427 VTGKMEDAIAVLEDMKEKGL-SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 410 DLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKK 469
Y+ LI G CE+++ +EAC + EM+ G P + T+ L L +L +
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 470 LDEESI 475
+ E+ +
Sbjct: 546 MVEKGV 551
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 194/450 (43%), Gaps = 66/450 (14%)
Query: 81 IALSLFNYAKS---LPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
+AL+LF+ ++ LPN +++ LID K+R+ D ++L+ M + L PN ++
Sbjct: 223 VALTLFDKMETKGCLPNVV----TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 138 LVLIRRLVSDTKTTSEHFTV-----------------LLDTLCKYGYVKLAAEVFNGNKR 180
V+I L + + F + L+ CK G A + R
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 181 HCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH 240
H P V YT LI+ CK G + A FL++M RG+ PN TY L++G +K ++
Sbjct: 339 H-GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 241 PEERFERTIRD-------------------------ADKVFDEMRERGIEPDVTSFSIVL 275
R R + D A V ++M+E+G+ PDV S+S VL
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
+ R++ +L R M E+GI P TY+S+I+ R ++A L++EM+R G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
P TY Y D + AL+L +M E G+ P TY VL+ K K
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL-PDVVTYSVLINGLNKQSRTREAKR 576
Query: 396 IWRDM-KESGVGPDLDLYTL--------------LIHGLCERKKWREACQFFVEMIEKGF 440
+ + E V D+ +TL LI G C + EA Q F M+ K
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
P + + G ++ +R L K++
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 135/328 (41%), Gaps = 48/328 (14%)
Query: 150 TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR-VETAQ 208
+TS F +++ + + + A + + + H F P V Y ++ + R + A+
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAH-GFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
+ EM+E + PNV TYN+L+ G C F I A +FD+M +G P+V
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFC----------FAGNIDVALTLFDKMETKGCLPNV 240
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE 328
+++ ++ Y + K R M +G+ P + +Y VI L GR+++ + E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
M R G S VTYN K Y + AL + +M GL
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT------------------ 342
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
P + YT LIH +C+ A +F +M +G P + T+
Sbjct: 343 ------------------PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
Query: 449 TLYRGLIQSDMLRTWRRLKKKLDEESIS 476
TL G Q + R+ +++++ S
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 137/326 (42%), Gaps = 58/326 (17%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----------------RRL 144
+++ LI+ + + A ++ +M ++ L+P+ ++ ++ R +
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 145 VS-DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
V K + ++ L+ C+ K A +++ R PD YT LI +C G
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTALINAYCMEGD 535
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER------FERTI-------- 249
+E A NEMVE+G+ P+VVTY+VL+NG+ ++ +R +E ++
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 250 --------------------------RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
+AD+VF+ M + +PD T+++I++H + RA
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
+ + ++ M + G T +++K L G++ + + ++RS A
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 344 FFKEYRGRKDADSALKLFKKMKEDGL 369
+ + D L + +M +DG
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE-YRGRKDADSALKL 360
T + + V+K + ++ A + G P ++YN R +++ A +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLC 420
FK+M E + SP TY +L++ F A I V ++ M+ G P++ Y LI G C
Sbjct: 193 FKEMLESQV-SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 421 ERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSE 480
+ +K + + M KG P +++ + GL + ++ + +++ S
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 481 FQNYQLKPY 489
N +K Y
Sbjct: 312 TYNTLIKGY 320
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 173/364 (47%), Gaps = 35/364 (9%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE-------- 153
++ ++D + K+R+F+ Q+ EM +R N T+ VL+ R + K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 154 ---------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
F LL LC+Y +V+ A +F +R F D+K +++ GWC LG V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE--FGCDIKAMNMILNGWCVLGNV 263
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
A+ F +++ P+VV+Y ++N + +K L R + D +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR---------- 313
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
PDV + V+ + +L+ FR + E+G P V TY S++K L R E
Sbjct: 314 NPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWE 373
Query: 325 LFDEMVRSG--VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L +EM G SP VT++ K + KD D L+ K K C T+ Y ++ +
Sbjct: 374 LVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNK----CEMTSDLYNLMFR 429
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
++++ D V+EIW +M+ SG+GPD YT+ IHGL + K EA +F EM+ KG +P
Sbjct: 430 LYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Query: 443 QKVT 446
+ T
Sbjct: 490 EPRT 493
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
R + +VFDEM +R + ++ ++L+ Y+ AHK ++ F KE GI + +
Sbjct: 157 RRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAF 216
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV-TYNCFFKEYRGRKDADSALKLFKKMK 365
++ L +E AE LF R C + N + + A + +K +
Sbjct: 217 HGLLMWLCRYKHVEFAETLF--CSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDII 274
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
C P +YG ++ K +G E++R M ++ PD+ + +I LC +K+
Sbjct: 275 ASK-CRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRI 333
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGL 454
EA + F E+ EKG P VT+ +L + L
Sbjct: 334 PEALEVFREISEKGPDPNVVTYNSLLKHL 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQR--SLTPNPSTF- 137
AL +F ++ P+P + +++ L+ + K+R+ + W+L+ EM+ + S +PN TF
Sbjct: 336 ALEVFREISEKGPDPNVV--TYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFS 393
Query: 138 -------------LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
+VL R + + TS+ + ++ ++ + E+++ +R
Sbjct: 394 YLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSG-L 452
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLN 231
PD + YT+ I+G G++ A S+ EM+ +G+ P T +LLN
Sbjct: 453 GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT-EMLLN 498
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 33/405 (8%)
Query: 89 AKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDT 148
KS P P + F+ L+ +AK+++FDL L +M + ++ N T+ +LI +
Sbjct: 2 VKSRPLPSIFE--FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 149 KTTSEHFTVLLDTLCKYGY---VKLAAEVFNG---NKR------------HCRFNPDVKM 190
+ + LL + K GY + + + NG KR + PD
Sbjct: 60 QISLA--LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
+T LI+G + A + ++ MV+RG +PN+VTY V++NG+C++ I
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR----------GDID 167
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
A + ++M IE DV F+ ++ + +L+ F+ M+ +GI P V TY+S+I
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
CL S GR DA L +M+ ++P VT+N + A KL M + +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI- 286
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
P TY L+ F D + K+++ M PDLD Y LI G C+ K+ + +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 431 FFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
F EM +G + VT+ TL +GL +++ K++ + +
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 173/374 (46%), Gaps = 29/374 (7%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLIRRL-----------------VSDTKTTSEHFTVLLD 160
A L+ M QR PN T+ V++ L + + F ++D
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+LCKY +V A +F + P+V Y+ LI C GR A L++M+E+ I
Sbjct: 194 SLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+VT+N L++ + E +A+K+ D+M +R I+PD+ +++ +++ +
Sbjct: 253 PNLVTFNALIDAFVK----------EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + F M + P + TY ++IK R+ED LF EM G+ VT
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y + D D+A K+FK+M DG+ P TY +LL + E++ M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
++S + D+ +YT +I G+C+ K + F + KG P VT+ T+ GL +L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 461 RTWRRLKKKLDEES 474
+ L KK+ E+
Sbjct: 482 QEAYALLKKMKEDG 495
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 174/352 (49%), Gaps = 30/352 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F+ +ID++ K R D A L EM+ + + PN T+ + L+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY------------------SSLISC 229
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
LC YG A+++ + + + NP++ + LI + K G+ A+ ++M++R I+P
Sbjct: 230 LCSYGRWSDASQLLS-DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
++ TYN L+NG C +H +R ++ A ++F+ M + PD+ +++ ++ + ++
Sbjct: 289 DIFTYNSLINGFC----MH--DRLDK----AKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ + + FR M +G+ TYT++I+ L G ++A+ +F +MV GV P +TY
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
+ + AL++F M++ + + Y +++ KA + +++ +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEI-KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
GV P++ Y +I GLC ++ +EA +M E G LP T+ TL R
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 153/341 (44%), Gaps = 30/341 (8%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
H AL+LF ++ P + ++ LI + ++ A QL+++M ++ + PN TF
Sbjct: 200 HVDDALNLFKEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 138 LVLIRRLVSDTKTTSEH-----------------FTVLLDTLCKYGYVKLAAEVFNGNKR 180
LI V + K + L++ C + + A ++F
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 181 HCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH 240
F PD+ Y LI G+CK RVE EM RG+ + VTY L+ G+ H
Sbjct: 319 KDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL-----FH 372
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
+ +A KVF +M G+ PD+ ++SI+L K + +L+ F M++ I
Sbjct: 373 DGD-----CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
+ YT++I+ + G+++D LF + GV P VTYN ++ A L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
KKMKEDG P + TY L++ L+ E+ R+M+
Sbjct: 488 LKKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR 527
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 174/374 (46%), Gaps = 29/374 (7%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLIRRL-----------------VSDTKTTSEHFTVLLD 160
A L+ M QR PN T+ V++ L + + F ++D
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+LCKY +V A +F + P+V Y+ LI C GR A L++M+E+ I
Sbjct: 269 SLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+VT+N L++ + E +A+K++D+M +R I+PD+ +++ +++ +
Sbjct: 328 PNLVTFNALIDAFVK----------EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + F M + P V TY ++IK R+ED LF EM G+ VT
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y + D D+A K+FK+M DG+ P TY +LL + E++ M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
++S + D+ +YT +I G+C+ K + F + KG P VT+ T+ GL +L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 461 RTWRRLKKKLDEES 474
+ L KK+ E+
Sbjct: 557 QEAYALLKKMKEDG 570
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 190/416 (45%), Gaps = 40/416 (9%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF KS P P + F+ L+ +AK+++FD+ L +M + + T+ +L
Sbjct: 69 AIGLFGGMVKSRPLPSIVE--FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGY---VKLAAEVFNG---NKR------------HC 182
I ++ + LL + K GY + + + NG KR
Sbjct: 127 INCFCRRSQISLA--LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ PD +T LI+G + A + ++ MV+RG +PN+VTY V++NG+C++
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR------ 238
Query: 243 ERFERTIRDAD---KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
D D + ++M IE DV F+ ++ + +L+ F+ M+ +GI
Sbjct: 239 -------GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
P V TY+S+I CL S GR DA L +M+ ++P VT+N + A K
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
L+ M + + P TY L+ F D + K+++ M PD+ Y LI G
Sbjct: 352 LYDDMIKRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
C+ K+ + + F EM +G + VT+ TL +GL +++ K++ + +
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 44/342 (12%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------- 154
F+ +ID++ K R D A L EM+ + + PN T+ LI L S + +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 155 ----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
F L+D K G A ++++ + +PD+ Y L+ G+C R+
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRL 381
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR-------------- 250
+ A+ MV + P+VVTYN L+ G C+ + R +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 251 -----------DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
+A KVF +M G+ PD+ ++SI+L K + +L+ F M++ I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
+ YT++I+ + G+++D LF + GV P VTYN ++ A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
L KKMKEDG P + TY L++ L+ E+ R+M+
Sbjct: 562 LLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+L+DA GLF MV+S P V +N K D + L +KM+ + +TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL-YTY 123
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
+L+ F + I + + M + G P + + L++G C K+ +A +M+E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 438 KGFLPQKVTFETLYRGL 454
G+ P +TF TL GL
Sbjct: 184 MGYRPDTITFTTLIHGL 200
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 36/237 (15%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+ DA +F M + P + F+ +L ++ K + + M+ I + TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 309 VIKC----------LASCG-------------------------RLEDAEGLFDEMVRSG 333
+I C LA G R+ DA L D+MV G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
P +T+ A A+ L +M + G C P TYGV++ K +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ M+ + + D+ ++ +I LC+ + +A F EM KG P VT+ +L
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 183/412 (44%), Gaps = 62/412 (15%)
Query: 98 SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH--- 154
S ++ L+ + K R D L+ EM+ L PN TF + IR L K +
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 155 --------------FTVLLDTLCKYGYVKLAAEVFNGNK--RHC-----------RFN-- 185
+TVL+D LC + A EVF K RH RF+
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 186 -------------------PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTY 226
PDV +T+L+ CK G A L+ M ++GI PN+ TY
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 227 NVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQL 286
N L+ G+ R +H + DA ++F M G++P ++ + + Y ++
Sbjct: 402 NTLICGLLR---VH-------RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 287 SLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
+L+ F MK +GI P + + + LA GR +A+ +F + G+ P +VTYN K
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
Y + D A+KL +M E+G C P L+ KAD + +++ MKE +
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENG-CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
P + Y L+ GL + K +EA + F M++KG P +TF TL+ L ++D
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 32/352 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++LLI + + ++A + ++ P+ +T+ LLD
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY------------------NFLLD 828
Query: 161 TLCKYGYVKLAAEVFNGNKRH-CRFNPDVKMYTVLIYGWCKLGRVETAQS-FLNEMVERG 218
K G + E++ H C N + ++I G K G V+ A + + M +R
Sbjct: 829 AYGKSGKIDELFELYKEMSTHECEAN--TITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
P TY L++G+ + L+ +A ++F+ M + G P+ ++I+++ +
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLY----------EAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+A + + F+ M ++G+ P + TY+ ++ CL GR+++ F E+ SG++P
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
V YN + AL LF +MK +P +TY L+ A M+ +I+
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+++ +G+ P++ + LI G K A + M+ GF P T+E L
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 193/465 (41%), Gaps = 89/465 (19%)
Query: 84 SLFNYAKSLP-NPPLSHSS--FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
S F+Y KS+ N L H++ + +++ + + + + M +R + + +T+L +
Sbjct: 100 SSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTI 159
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG------NKRHCR----------- 183
+ L K + L + ++G+V L A +NG R C
Sbjct: 160 FKSL--SVKGGLKQAPYALRKMREFGFV-LNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL 216
Query: 184 --FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNV------------------ 223
F P ++ Y+ L+ G K +++ L EM G++PNV
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 224 -----------------VTYNVLLNGVC--RKVSLHPE---------------------E 243
VTY VL++ +C RK+ E +
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 244 RFERTIRDADKV---FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
RF RD D V + EM + G PDV +F+I++ +A + D +M++QGI
Sbjct: 337 RFSDN-RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
P + TY ++I L RL+DA LF M GV P A TY F Y D+ SAL+
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLC 420
F+KMK G+ +P L KA K+I+ +K+ G+ PD Y +++
Sbjct: 456 FEKMKTKGI-APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 421 ERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML-RTWR 464
+ + EA + EM+E G P + +L L ++D + W+
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 157/383 (40%), Gaps = 65/383 (16%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS-------------- 146
+F +L+D + K F A+ + M + + PN T+ LI L+
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 147 ---DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
K T+ + V +D K G A E F K P++ +Y K GR
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASLYSLAKAGR 483
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
A+ + + G+ P+ VTYN+++ KV I +A K+ EM E G
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMK-CYSKVG---------EIDEAIKLLSEMMENG 533
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
EPDV + +++ +A + + F MKE + PTV TY +++ L G++++A
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
LF+ MV+ G P +T+N F + ALK+ KM + G C P TY
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTYNT---- 648
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+I GL + + +EA FF +M +K P
Sbjct: 649 -------------------------------IIFGLVKNGQVKEAMCFFHQM-KKLVYPD 676
Query: 444 KVTFETLYRGLIQSDMLRTWRRL 466
VT TL G++++ ++ ++
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKI 699
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 171/425 (40%), Gaps = 80/425 (18%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT-------------- 150
LI+T+ K + D AW++ M + L P T+ L+ L + K
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 151 ---TSEHFTVLLDTLCKYGYVKLA-------------AEVF-----------NGNKRH-- 181
+ F L D LCK V LA +VF NG +
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 182 CRFN-------PDVKMYTVLIYGWCKLGRVETAQSFLNE--------------------- 213
C F+ PD L+ G K +E A +
Sbjct: 664 CFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSI 723
Query: 214 MVERGIEPNVVTYN--VLLNGVCRKVS--LHPEERFE---RTIRDADKVFDEM-RERGIE 265
+ E GI+ N V+++ ++ NG+CR L P R+ + A +F++ ++ G++
Sbjct: 724 LAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ 782
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
P + ++++++ A +++ D F +K G P VATY ++ G++++ L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
+ EM +T+N + D AL L+ + D SPTA TYG L+
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
K+ + K+++ M + G P+ +Y +LI+G + + AC F M+++G P
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 446 TFETL 450
T+ L
Sbjct: 963 TYSVL 967
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
Query: 199 CKLGRVETAQSFLNEMV-ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
CK V A++ + + G++P + TYN+L+ G+ I A VF
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA----------DMIEIAQDVFL 809
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
+++ G PDV +++ +L Y ++ K + ++ M T+ VI L G
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Query: 318 RLEDAEGLF-DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
++DA L+ D M SP A TY A +LF+ M + G C P
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG-CRPNCAI 928
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
Y +L+ F KA +++ M + GV PDL Y++L+ LC + E +F E+
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 437 EKGFLPQKVTFETLYRGLIQS 457
E G P V + + GL +S
Sbjct: 989 ESGLNPDVVCYNLIINGLGKS 1009
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 36/355 (10%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
+ +ID++ K R D A L TEMD + + P+ T+ + L+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY------------------SSLISC 284
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
LC YG A+ + + + + NP+V + LI + K G++ A+ +EM++R I+P
Sbjct: 285 LCNYGRWSDASRLLS-DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
N+VTYN L+NG C +H + +A ++F M + PDV +++ +++ + +A
Sbjct: 344 NIVTYNSLINGFC----MHDR------LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
K ++ FR M +G+ TYT++I ++A+ +F +MV GV P +TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR--- 398
N + A+ +F+ +++ + P +TY ++ + KA G V++ W
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKM-EPDIYTYNIMSEGMCKA---GKVEDGWDLFC 509
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ GV PD+ Y +I G C++ EA F++M E G LP T+ TL R
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 181/395 (45%), Gaps = 34/395 (8%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF KS P P + F L+ +AK+++FDL +M+ ++ N T+ ++
Sbjct: 49 AVDLFGEMVKSRPFPSIVE--FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGY---VKLAAEVFNGNKRHCR-------------- 183
I L ++ + +L + K GY + + NG R
Sbjct: 107 INCLCRRSQLS--FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 184 -FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ PD +T L++G + + A + + MV +G +P++VTY ++NG+C+
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK------- 217
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
R E + A + ++M + IE DV +S V+ + +L+ F M +GI P
Sbjct: 218 -RGEPDL--ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
V TY+S+I CL + GR DA L +M+ ++P VT+N + A KLF
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+M + + P TY L+ F D + ++I+ M PD+ Y LI+G C+
Sbjct: 335 EMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
KK + + F +M +G + VT+ TL G Q+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 176/376 (46%), Gaps = 34/376 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +I+ + K + DLA L+ +M++ + + V+I ++ ++D
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD-----VVI-------------YSTVID 248
Query: 161 TLCKYGYVKLAAEVFN--GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG 218
+LCKY +V A +F NK PDV Y+ LI C GR A L++M+ER
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKG---IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
I PNVVT+N L++ + E + +A+K+FDEM +R I+P++ +++ +++ +
Sbjct: 306 INPNVVTFNSLIDAFAK----------EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+ + F +M + P V TY ++I ++ D LF +M R G+
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
VTY + D D+A +FK+M DG+ P TY LL K + ++
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
+++S + PD+ Y ++ G+C+ K + F + KG P + + T+ G +
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Query: 459 MLRTWRRLKKKLDEES 474
+ L K+ E+
Sbjct: 535 LKEEAYTLFIKMKEDG 550
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 11/290 (3%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P + ++ L+ K+ + + SF +M G+ N+ TYN+++N +CR+ L
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSF---- 118
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
A + +M + G P + + + +L+ + ++ ++ M E G P T
Sbjct: 119 ------ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 172
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
+T+++ L + +A L + MV G P VTY R + D AL L KM
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM- 231
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
E G Y ++ K + ++ +M G+ PD+ Y+ LI LC +W
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
+A + +M+E+ P VTF +L + L +L ++ + SI
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 16/282 (5%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ A EMV+ P++V ++ LL+ + + ++F+ I +K M
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM------KKFDLVISFGEK----MEIL 94
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G+ ++ +++I+++ R + +L M + G P++ T S++ R+ +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D+MV G P VT+ A A+ L ++M G C P TYG ++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 213
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K + + M++ + D+ +Y+ +I LC+ + +A F EM KG P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 443 QKVTFETLYRGLIQ----SDMLRTWR-RLKKKLDEESISFGS 479
T+ +L L SD R L++K++ ++F S
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----------------RRL 144
+++ LI+ K ++ +L +M +R L N T+ LI +++
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 145 VSD-TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
VSD + LLD LCK G ++ A VF ++ + PD+ Y ++ G CK G+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGK 500
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
VE + +G++P+V+ YN +++G C+K L E A +F +M+E G
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK-GLKEE---------AYTLFIKMKEDG 550
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
PD +++ ++ + R S + + M+ +TY V L GRL+
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRLD 606
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 188/382 (49%), Gaps = 33/382 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEM-DQRSLTPNPSTFLVL 140
AL FN+ + + +F+ +ID + K +F+++W LI M PN TF ++
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 141 IRRLVS--------DTKTTSEHFTV--------LLDTLCKYGYVKLAAEV-FNGNKRHCR 183
+R V+ D + F + L+D LC++ +V A E+ F N
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNG 183
Query: 184 FN-PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
F+ + K++ +++ GW KLG + + +M G+ ++ +Y++ ++ +C+ S P
Sbjct: 184 FSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCK--SGKPW 241
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
+ A K++ EM+ R ++ DV +++ V+ + + + FR M+E+G P
Sbjct: 242 K--------AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
VAT+ ++IK L GR+ DA + DEM + G P ++TY C F + L LF
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFG 350
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+M G+ P TY +L++ F + + V +W+ MKESG PD Y +I L ++
Sbjct: 351 RMIRSGV-RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQK 409
Query: 423 KKWREACQFFVEMIEKGFLPQK 444
A ++ EMIE+G P++
Sbjct: 410 GMLDMAREYEEEMIERGLSPRR 431
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 128/312 (41%), Gaps = 22/312 (7%)
Query: 147 DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVET 206
D KT E T C + A E FN +R F + + +I K E
Sbjct: 46 DQKTVCEALT------CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEI 99
Query: 207 AQSFLNEMVERGIE-PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
+ + +N M+ PN VT+ ++ R V+ H +++A +D++ + +
Sbjct: 100 SWALINRMIGNTESVPNHVTFRIVFK---RYVTAH-------LVQEAIDAYDKLDDFNLR 149
Query: 266 PDVTSFSIVLHVYSRAH---KPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
+ + +++V + H +L K + + T + +++ + G
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNT-KIHNLILRGWSKLGWWGKC 208
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+ + +M GV+ +Y+ + A+KL+K+MK + Y +++
Sbjct: 209 KEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVV-AYNTVIR 267
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
+ + ++R+M+E G P++ + +I LCE + R+A + EM ++G P
Sbjct: 268 AIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQP 327
Query: 443 QKVTFETLYRGL 454
+T+ L+ L
Sbjct: 328 DSITYMCLFSRL 339
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 196/392 (50%), Gaps = 43/392 (10%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHL--LIDTMAKVRQFDLAWQLITEMDQ--RSLTPNPSTF 137
L + YA ++ HSSF L ++ + + R+FD W+L+ E + RSL +P T
Sbjct: 91 TLEFYRYASAIRG--FYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLI-SPRTM 147
Query: 138 LVLI-------------------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGN 178
V++ +RLV D T+ F LL TLC+ + A V++
Sbjct: 148 QVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTA-CFNALLRTLCQEKSMTDARNVYHSL 206
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
K +F PD++ + +L+ GW E A++F EM +G++P+VVTYN L++ C+
Sbjct: 207 KH--QFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK--- 258
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
+R I A K+ D+MRE PDV +++ V+ +P + + + MKE G
Sbjct: 259 -------DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG 311
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
P VA Y + I+ RL DA+ L DEMV+ G+SP A TYN FF+ D +
Sbjct: 312 CYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSW 371
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
+L+ +M + C P + L++MF + + + + +W DM G G + +L+
Sbjct: 372 ELYVRMLGNE-CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDL 430
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
LC+ K EA + +EM+EKG P V+F+ +
Sbjct: 431 LCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
M G+ P VTYN Y ++ + A KL KM+E+ +P TY ++
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEE-TPDVITYTTVIGGLGLIG 295
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
+E+ ++MKE G PD+ Y I C ++ +A + EM++KG P T+
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
Query: 449 TLYRGL-IQSDMLRTWRRLKKKLDEESI 475
+R L + +D+ R+W + L E +
Sbjct: 356 LFFRVLSLANDLGRSWELYVRMLGNECL 383
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 179/373 (47%), Gaps = 39/373 (10%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL--VSDT-------------- 148
LID K A + EM R +TP+ T+ +I + D
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 149 -KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
+ S FT L++ CK G++K A V N + +P+V YT LI G CK G +++A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHN-HMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
L+EM + G++PN+ TYN ++NG+C+ I +A K+ E G+ D
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCK----------SGNIEEAVKLVGEFEAAGLNAD 525
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
+++ ++ Y ++ + + + + M +G+ PT+ T+ ++ G LED E L +
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
M+ G++P A T+N K+Y R + +A ++K M G+ P TY L++ KA
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV-GPDGKTYENLVKGHCKA 644
Query: 388 DMIGVVKEIW---RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
+ KE W ++MK G + Y++LI G +RKK+ EA + F +M +G K
Sbjct: 645 RNM---KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 445 VTF----ETLYRG 453
F +T Y+G
Sbjct: 702 EIFDFFSDTKYKG 714
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 175/390 (44%), Gaps = 30/390 (7%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
+S++++I + ++ + A L+ M+ + TP+ ++ + ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY------------------STVV 288
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+ C++G + ++ KR P+ +Y +I C++ ++ A+ +EM+ +GI
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
P+ V Y L++G C++ IR A K F EM R I PDV +++ ++ +
Sbjct: 348 LPDTVVYTTLIDGFCKR----------GDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ + F M +G+ P T+T +I G ++DA + + M+++G SP V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
TY D DSA +L +M + GL P TY ++ K+ I ++ +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
+ +G+ D YT L+ C+ + +A + EM+ KG P VTF L G M
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 460 LRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
L +L + + I+ + N +K Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 30/294 (10%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
H K A + N+ P + ++ LID + K D A +L+ EM + L PN T
Sbjct: 436 HMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT- 493
Query: 138 LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
+ +++ LCK G ++ A ++ G N D YT L+
Sbjct: 494 -----------------YNSIVNGLCKSGNIEEAVKLV-GEFEAAGLNADTVTYTTLMDA 535
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+CK G ++ AQ L EM+ +G++P +VT+NVL+NG C LH + D +K+ +
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC----LHG------MLEDGEKLLN 585
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
M +GI P+ T+F+ ++ Y + + + ++ M +G+ P TY +++K
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
+++A LF EM G S TY+ K + RK A ++F +M+ +GL +
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 182/454 (40%), Gaps = 66/454 (14%)
Query: 80 KIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQR---SLTPNPST 136
++ L F++A+S + L S ++I + +A LI+ +R ++T +
Sbjct: 102 RLVLDFFDWARSRRDSNLE--SLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQ 159
Query: 137 FLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVF-------------NGNKRHCR 183
F L+ D + F V L +G ++ A VF + N R
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 184 FNPD----------------------VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
+ D V Y ++I+ C+LGR++ A L M +G P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 222 NVVTYNVLLNGVCR---------------KVSLHPEERFERTI----------RDADKVF 256
+V++Y+ ++NG CR + L P +I +A++ F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
EM +GI PD ++ ++ + + + + F M + I P V TYT++I
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
G + +A LF EM G+ P +VT+ Y A ++ M + G CSP T
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVT 458
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
Y L+ K + E+ +M + G+ P++ Y +++GLC+ EA + E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 437 EKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
G VT+ TL +S + + + K++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSR-AHKPQLSLDKFRMMKEQGICPTVATYT 307
+R+A +VF++M G+ V S ++ L S+ +K ++ FR E G+C VA+Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKED 367
VI + GR+++A L M G +P ++Y+ Y + D KL + MK
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
GL P ++ YG ++ + + + +E + +M G+ PD +YT LI G C+R R
Sbjct: 311 GL-KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQ-SDMLRTWRRLK----KKLDEESISFGSEFQ 482
A +FF EM + P +T+ + G Q DM+ + K L+ +S++F
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 483 NY 484
Y
Sbjct: 430 GY 431
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 32/208 (15%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR-----------------R 143
++ L+D K + D A +++ EM + L P TF VL+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR--FNPDVKMYTVLIYGWCKL 201
L + F L+ C +K A ++ K C PD K Y L+ G CK
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIY---KDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
++ A EM +G +V TY+VL+ G ++ + +A +VFD+MR
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR----------KKFLEAREVFDQMRR 694
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
G+ D F + +P +D
Sbjct: 695 EGLAADKEIFDFFSDTKYKGKRPDTIVD 722
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 179/373 (47%), Gaps = 39/373 (10%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL--VSDT-------------- 148
LID K A + EM R +TP+ T+ +I + D
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 149 -KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
+ S FT L++ CK G++K A V N + +P+V YT LI G CK G +++A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHN-HMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
L+EM + G++PN+ TYN ++NG+C+ I +A K+ E G+ D
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCK----------SGNIEEAVKLVGEFEAAGLNAD 525
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
+++ ++ Y ++ + + + + M +G+ PT+ T+ ++ G LED E L +
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
M+ G++P A T+N K+Y R + +A ++K M G+ P TY L++ KA
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV-GPDGKTYENLVKGHCKA 644
Query: 388 DMIGVVKEIW---RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
+ KE W ++MK G + Y++LI G +RKK+ EA + F +M +G K
Sbjct: 645 RNM---KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 445 VTF----ETLYRG 453
F +T Y+G
Sbjct: 702 EIFDFFSDTKYKG 714
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 175/390 (44%), Gaps = 30/390 (7%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
+S++++I + ++ + A L+ M+ + TP+ ++ + ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY------------------STVV 288
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+ C++G + ++ KR P+ +Y +I C++ ++ A+ +EM+ +GI
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
P+ V Y L++G C++ IR A K F EM R I PDV +++ ++ +
Sbjct: 348 LPDTVVYTTLIDGFCKR----------GDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ + F M +G+ P T+T +I G ++DA + + M+++G SP V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
TY D DSA +L +M + GL P TY ++ K+ I ++ +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
+ +G+ D YT L+ C+ + +A + EM+ KG P VTF L G M
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 460 LRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
L +L + + I+ + N +K Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 30/294 (10%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
H K A + N+ P + ++ LID + K D A +L+ EM + L PN T
Sbjct: 436 HMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT- 493
Query: 138 LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
+ +++ LCK G ++ A ++ G N D YT L+
Sbjct: 494 -----------------YNSIVNGLCKSGNIEEAVKLV-GEFEAAGLNADTVTYTTLMDA 535
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+CK G ++ AQ L EM+ +G++P +VT+NVL+NG C LH + D +K+ +
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC----LHG------MLEDGEKLLN 585
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
M +GI P+ T+F+ ++ Y + + + ++ M +G+ P TY +++K
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
+++A LF EM G S TY+ K + RK A ++F +M+ +GL +
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 182/454 (40%), Gaps = 66/454 (14%)
Query: 80 KIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQR---SLTPNPST 136
++ L F++A+S + L S ++I + +A LI+ +R ++T +
Sbjct: 102 RLVLDFFDWARSRRDSNLE--SLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQ 159
Query: 137 FLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVF-------------NGNKRHCR 183
F L+ D + F V L +G ++ A VF + N R
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 184 FNPD----------------------VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
+ D V Y ++I+ C+LGR++ A L M +G P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 222 NVVTYNVLLNGVCR---------------KVSLHPEERFERTI----------RDADKVF 256
+V++Y+ ++NG CR + L P +I +A++ F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
EM +GI PD ++ ++ + + + + F M + I P V TYT++I
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
G + +A LF EM G+ P +VT+ Y A ++ M + G CSP T
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVT 458
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
Y L+ K + E+ +M + G+ P++ Y +++GLC+ EA + E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 437 EKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
G VT+ TL +S + + + K++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSR-AHKPQLSLDKFRMMKEQGICPTVATYT 307
+R+A +VF++M G+ V S ++ L S+ +K ++ FR E G+C VA+Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKED 367
VI + GR+++A L M G +P ++Y+ Y + D KL + MK
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
GL P ++ YG ++ + + + +E + +M G+ PD +YT LI G C+R R
Sbjct: 311 GL-KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQ-SDMLRTWRRLK----KKLDEESISFGSEFQ 482
A +FF EM + P +T+ + G Q DM+ + K L+ +S++F
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 483 NY 484
Y
Sbjct: 430 GY 431
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 32/208 (15%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR-----------------R 143
++ L+D K + D A +++ EM + L P TF VL+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR--FNPDVKMYTVLIYGWCKL 201
L + F L+ C +K A ++ K C PD K Y L+ G CK
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIY---KDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
++ A EM +G +V TY+VL+ G ++ + +A +VFD+MR
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR----------KKFLEAREVFDQMRR 694
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
G+ D F + +P +D
Sbjct: 695 EGLAADKEIFDFFSDTKYKGKRPDTIVD 722
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 171/352 (48%), Gaps = 30/352 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ +ID + K + D A L EM+ + + PN T+ + L+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY------------------SSLISC 300
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
LC YG A+ + + + NPDV ++ LI + K G++ A+ +EMV+R I+P
Sbjct: 301 LCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
++VTY+ L+NG C +H + +A ++F+ M + PDV +++ ++ + +
Sbjct: 360 SIVTYSSLINGFC----MHDR------LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ + ++ FR M ++G+ TY +I+ L G + A+ +F EMV GV P +TY
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
N + A+ +F+ ++ + PT +TY ++++ KA + +++ ++
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKM-EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
GV PD+ Y +I G C + EA F EM E G LP + TL R
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 172/370 (46%), Gaps = 29/370 (7%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH---------- 154
L++ ++ A L+ +M PN TF LI L K +
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 155 -------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
+ V+++ LCK G LA + N + P V +Y +I G CK ++ A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLN-KMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
+ EM +GI PNVVTY+ L++ +C + R DA ++ +M ER I PD
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCN---------YGRW-SDASRLLSDMIERKINPD 325
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
V +FS ++ + + K + + M ++ I P++ TY+S+I RL++A+ +F+
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
MV P VTYN K + K + +++F++M + GL T TY +L+Q +A
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQA 444
Query: 388 DMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
+ +EI+++M GV P++ Y L+ GLC+ K +A F + P T+
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 448 ETLYRGLIQS 457
+ G+ ++
Sbjct: 505 NIMIEGMCKA 514
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 179/385 (46%), Gaps = 35/385 (9%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF 155
P +H ++ +LI+ + Q LA ++ +M + PN T L+ +K SE
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH-SKRISEA- 170
Query: 156 TVLLDTLCKYGYV-------KLAAEVFNGNK-------------RHCRFNPDVKMYTVLI 195
L+D + GY L +F NK + C+ PD+ Y V++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ--PDLVTYGVVV 228
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
G CK G + A + LN+M + +EP V+ YN +++G+C+ + + DA +
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY----------KHMDDALNL 278
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
F EM +GI P+V ++S ++ + + M E+ I P V T++++I
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH 375
G+L +AE L+DEMV+ + P VTY+ + D A ++F+ M C P
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH-CFPDVV 397
Query: 376 TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM 435
TY L++ F K + E++R+M + G+ + Y +LI GL + A + F EM
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 436 IEKGFLPQKVTFETLYRGLIQSDML 460
+ G P +T+ TL GL ++ L
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKL 482
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 40/398 (10%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A++LF KS P P + F L+ +AK+ +FD+ L +M + N T+ +L
Sbjct: 65 AVALFGEMVKSRPFPSIIE--FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGY---VKLAAEVFNG---NKRHCR----------- 183
I ++ +L + K GY + + + NG +KR
Sbjct: 123 INCFCRRSQLPLA--LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 184 -FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ P+ + LI+G + A + ++ MV +G +P++VTY V++NG+C++
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR------ 234
Query: 243 ERFERTIRDADKVF---DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
D D F ++M + +EP V ++ ++ + +L+ F+ M+ +GI
Sbjct: 235 -------GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
P V TY+S+I CL + GR DA L +M+ ++P T++ + A K
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
L+ +M + + P+ TY L+ F D + K+++ M PD+ Y LI G
Sbjct: 348 LYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
C+ K+ E + F EM ++G + VT+ L +GL Q+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 166/362 (45%), Gaps = 37/362 (10%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
H AL+LF ++ P + ++ LI + ++ A +L+++M +R + P+ TF
Sbjct: 271 HMDDALNLFKEMETKGIRP-NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 138 LVLIRRLVSDTKTTSEH-----------------FTVLLDTLCKYGYVKLAAEVFN-GNK 179
LI V + K ++ L++ C + + A ++F
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 180 RHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSL 239
+HC PDV Y LI G+CK RVE EM +RG+ N VTYN+L+ G+
Sbjct: 390 KHCF--PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL------ 441
Query: 240 HPEERFERTIRD-ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
F+ D A ++F EM G+ P++ +++ +L + K + ++ F ++
Sbjct: 442 -----FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+ PT+ TY +I+ + G++ED LF + GV P V YN + + + A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD---LDLYTLL 415
LFK+MKEDG P + Y L++ L+ E+ ++M+ G D + L T +
Sbjct: 557 ALFKEMKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Query: 416 IH 417
+H
Sbjct: 616 LH 617
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 16/304 (5%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P + ++ L+ K+ + + S +M GI N TY++L+N CR+ L
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPL---- 134
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
A V +M + G EP++ + S +L+ Y + + ++ M G P T
Sbjct: 135 ------ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
+ ++I L + +A L D MV G P VTY R D D A L KM
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM- 247
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
E G P Y ++ K + ++++M+ G+ P++ Y+ LI LC +W
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESISFGSE 480
+A + +MIE+ P TF L ++ L +L K+ +D +++ S
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 481 FQNY 484
+
Sbjct: 368 INGF 371
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 11/274 (4%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ A + EMV+ P+++ ++ LL+ + + +F+ I + ++M+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM------NKFDVVI----SLGEQMQNL 110
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI + ++SI+++ + R + L+L M + G P + T +S++ R+ +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D+M +G P VT+N A A+ L +M G C P TYGV++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVN 229
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K + + M++ + P + +Y +I GLC+ K +A F EM KG P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
VT+ +L L RL + E I+
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 197/417 (47%), Gaps = 42/417 (10%)
Query: 92 LPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTT 151
LP+ P S++S L+ MA+ R FD Q++ EM P+ +T + ++ V K
Sbjct: 94 LPHCPESYNSLLLV---MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLR 150
Query: 152 SEH-----------------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL 194
+ +T L+ + + +F + + P V ++T L
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ-QMQELGYEPTVHLFTTL 209
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLN--GVCRKVSLHPEERFERTIRDA 252
I G+ K GRV++A S L+EM ++ ++V YNV ++ G KV + A
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM------------A 257
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
K F E+ G++PD +++ ++ V +A++ +++ F +++ P Y ++I
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
S G+ ++A L + G P + YNC R D ALK+F++MK+D +P
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--AP 375
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
TY +L+ M +A + E+ M+++G+ P++ +++ LC+ +K EAC F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEE----SISFGSEFQNY 484
EM K P ++TF +L GL + + ++ +K LD + SI + S +N+
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 184/429 (42%), Gaps = 68/429 (15%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL +F K P LS ++++LID + + + D A++L M + L PN T +++
Sbjct: 362 ALKVFEEMKKDAAPNLS--TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 142 RRLVSDTK----------------TTSE-HFTVLLDTLCKYGYVKLAAEVFNGN-KRHCR 183
RL K T E F L+D L K G V A +V+ CR
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
N V YT LI + GR E +M+ + P++ N ++ C + PE+
Sbjct: 480 TNSIV--YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD--CMFKAGEPEK 535
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
+F+E++ R PD S+SI++H +A + + F MKEQG
Sbjct: 536 --------GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC----------------FFKE 347
Y VI CG++ A L +EM G P VTY F+E
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 348 YRGRK-------------------DADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
+ ++ D A + +++ + GL +P +T+ LL +KA+
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL-TPNLYTWNSLLDALVKAE 706
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
I ++ MKE P+ Y +LI+GLC+ +K+ +A F+ EM ++G P +++
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 449 TLYRGLIQS 457
T+ GL ++
Sbjct: 767 TMISGLAKA 775
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 169/409 (41%), Gaps = 62/409 (15%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-----------------RR 143
+ ++++D + K ++ D A + EMD + TP+ TF LI +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYV----KLAAEVFNGN--------------------- 178
L SD +T S +T L+ +G K+ ++ N N
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 179 ---------KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVL 229
+ RF PD + Y++LI+G K G M E+G + YN++
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 230 LNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
++G C+ + A ++ +EM+ +G EP V ++ V+ ++ + +
Sbjct: 594 IDGFCKC----------GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
F K + I V Y+S+I GR+++A + +E+++ G++P T+N
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
++ + AL F+ MKE C+P TYG+L+ K W++M++ G+ P
Sbjct: 704 KAEEINEALVCFQSMKELK-CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 410 DLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
YT +I GL + EA F G +P + + GL +
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 32/309 (10%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
L +++++ID K + + A+QL+ EM + P T+ +I
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI--------------- 629
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
D L K + A +F K R +V +Y+ LI G+ K+GR++ A L E+++
Sbjct: 630 ---DGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
+G+ PN+ T+N LL+ + + EE I +A F M+E P+ ++ I+++
Sbjct: 686 KGLTPNLYTWNSLLDALVK-----AEE-----INEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
+ K + ++ M++QG+ P+ +YT++I LA G + +A LFD +G P
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH-TYGVLLQMFLKADMIGVVKE 395
+ YN + A A LF++ + GL P + T VLL K D +
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL--PIHNKTCVVLLDTLHKNDCLEQAAI 853
Query: 396 IWRDMKESG 404
+ ++E+G
Sbjct: 854 VGAVLRETG 862
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 237 VSLHPEERFE----RTIRDADKVFDEMR--ERGIE----PDVTSFSIVLHVYSRAHKPQL 286
+S P+ F R ++D ++ + R ER E P+ S++ +L V +R
Sbjct: 59 LSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDA 116
Query: 287 SLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
M G P+V T ++ +L + + M + P Y
Sbjct: 117 LDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIG 176
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
+ +D L LF++M+E G PT H + L++ F K + + +MK S +
Sbjct: 177 AFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
D+ LY + I + K A +FF E+ G P +VT+ ++ L +++ L
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 189/396 (47%), Gaps = 36/396 (9%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF + KS P P + F+ L+ + K++++D+ L +M+ + + TF ++
Sbjct: 69 AIDLFSDMVKSRPFPSIVD--FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGY----VKLAAEVFNGNKRHCR------------- 183
I + + +L + K GY V + + V NG R R
Sbjct: 127 INCFCCCFQVSLA--LSILGKMLKLGYEPDRVTIGSLV-NGFCRRNRVSDAVSLVDKMVE 183
Query: 184 --FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
+ PD+ Y +I CK RV A F E+ +GI PNVVTY L+NG+C
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN------ 237
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
R+ DA ++ +M ++ I P+V ++S +L + + K + + F M I P
Sbjct: 238 SSRWS----DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
+ TY+S+I L R+++A +FD MV G V+YN + K + +KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
++M + GL S T TY L+Q F +A + +E + M G+ PD+ Y +L+ GLC+
Sbjct: 354 REMSQRGLVSNTV-TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+ +A F +M ++ VT+ T+ RG+ ++
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 170/350 (48%), Gaps = 36/350 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ +ID++ K ++ + A+ E++++ + PN T+ L+ L + ++ S+ +L D
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW-SDAARLLSD 250
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+ K + P+V Y+ L+ + K G+V A+ EMV I+
Sbjct: 251 MIKK------------------KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P++VTY+ L+NG+C LH I +A+++FD M +G DV S++ +++ + +
Sbjct: 293 PDIVTYSSLINGLC----LHDR------IDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
A + + + FR M ++G+ TY ++I+ G ++ A+ F +M G+SP T
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR-- 398
YN + + AL +F+ M++ + TY +++ K G V+E W
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREM-DLDIVTYTTVIRGMCKT---GKVEEAWSLF 458
Query: 399 -DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
+ G+ PD+ YT ++ GLC + E + +M ++G + T
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 141/303 (46%), Gaps = 51/303 (16%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
D+ + ++I +C +V A S L +M++ G EP+ VT L+NG CR+
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR---------- 168
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
+ DA + D+M E G +PD+ +++ ++ + + + D F+ ++ +GI P V TY
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
T+++ L + R DA L +M++ ++P +T
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT-------------------------- 262
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
Y LL F+K + KE++ +M + PD+ Y+ LI+GLC +
Sbjct: 263 ----------YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESISFGSEF 481
EA Q F M+ KG L V++ TL G ++ D ++ +R + ++ L ++++ +
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 482 QNY 484
Q +
Sbjct: 373 QGF 375
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 42/226 (18%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL--VSDTKTTSEHFT-- 156
S++ LI+ K ++ + +L EM QR L N T+ LI+ D E F+
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 157 -------------VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+LL LC G ++ A +F ++ + D+ YT +I G CK G+
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMCKTGK 450
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
VE A S + +G++P++VTY +++G+C K LH E ++ +M++ G
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE----------ALYTKMKQEG 500
Query: 264 I--------EPDVT-SFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
+ + D+T S ++ + S + P L D + G+C
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKD-----IKSGVC 541
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 92/248 (37%), Gaps = 47/248 (18%)
Query: 243 ERFERT------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKE 296
ER +T + DA +F +M + P + F+ +L + K + + + M+
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 297 QGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
GI + T+ VI C C ++ A + +M++ G P VT + R
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 357 ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
A+ L KM E G PD+ Y +I
Sbjct: 174 AVSLVDKMV------------------------------------EIGYKPDIVAYNAII 197
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLD 471
LC+ K+ +A FF E+ KG P VT+ L GL S RL KKK+
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 472 EESISFGS 479
I++ +
Sbjct: 258 PNVITYSA 265
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 181/369 (49%), Gaps = 49/369 (13%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ LID + FD A++L++ M+ R L P+ T+ T ++D
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY------------------TSMID 505
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+LCK V+ A ++F+ ++ NP+V MYT LI G+CK G+V+ A L +M+ +
Sbjct: 506 SLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN +T+N L++G+C + +++A + ++M + G++P V++ +I++H +
Sbjct: 565 PNSLTFNALIHGLCA----------DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ +F+ M G P TYT+ I+ GRL DAE + +M +GVSP T
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK-------------- 386
Y+ K Y + A + K+M++ G C P+ HT+ L++ L+
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTG-CEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 387 --ADMI--GVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI-EKGFL 441
++M+ V E+ M E V P+ Y LI G+CE R A + F M +G
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 442 PQKVTFETL 450
P ++ F L
Sbjct: 794 PSELVFNAL 802
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 177/398 (44%), Gaps = 45/398 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
++ +LI ++ + A L+ EM++ + PN T+ VLI L S K
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ L++ CK G ++ A +V + + +P+ + Y LI G+CK
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-KLSPNTRTYNELIKGYCK-SN 442
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF------------------ 245
V A LN+M+ER + P+VVTYN L++G CR + R
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 246 -------ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
+ + +A +FD + ++G+ P+V ++ ++ Y +A K + M +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
P T+ ++I L + G+L++A L ++MV+ G+ P T D D A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
F++M G P AHTY +Q + + + +++ M+E+GV PDL Y+ LI G
Sbjct: 623 SRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+ + A M + G P + TF +L + L++
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 154/321 (47%), Gaps = 13/321 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ LL++L ++G V +V+ + P++ Y ++ G+CKLG VE A +++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
VE G++P+ TY L+ G C++ + + A KVF+EM +G + +++ +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQR----------KDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+H A + ++D F MK+ PTV TYT +IK L R +A L EM +G+
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P TY + + A +L +M E GL P TY L+ + K MI
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL-MPNVITYNALINGYCKRGMIEDAV 413
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
++ M+ + P+ Y LI G C + +A +M+E+ LP VT+ +L G
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 455 IQSDMLRTWRRLKKKLDEESI 475
+S + RL +++ +
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGL 493
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 161/389 (41%), Gaps = 30/389 (7%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV-----------------SD 147
LI + R+ D A L +M P T+ VLI+ L +
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 148 TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
K +TVL+D+LC + A E+ G P+V Y LI G+CK G +E A
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELL-GQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
+ M R + PN TYN L+ G C+ + A V ++M ER + PD
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKS-----------NVHKAMGVLNKMLERKVLPD 461
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
V +++ ++ R+ + +M ++G+ P TYTS+I L R+E+A LFD
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
+ + GV+P V Y Y D A + +KM C P + T+ L+
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN-CLPNSLTFNALIHGLCAD 580
Query: 388 DMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
+ + M + G+ P + T+LIH L + + A F +M+ G P T+
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 448 ETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
T + + L + K+ E +S
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 15/266 (5%)
Query: 226 YNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQ 285
YN LLN + R + + +V+ EM E + P++ +++ +++ Y + +
Sbjct: 186 YNTLLNSLARF----------GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVE 235
Query: 286 LSLDKFRMMKEQGICPTVATYTSVIKCLASCGR--LEDAEGLFDEMVRSGVSPCAVTYNC 343
+ + E G+ P TYTS+I + C R L+ A +F+EM G V Y
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLI--MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 344 FFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
+ D A+ LF KMK+D C PT TY VL++ ++ + ++M+E+
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDE-CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTW 463
G+ P++ YT+LI LC + K+ +A + +M+EKG +P +T+ L G + M+
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 464 RRLKKKLDEESISFGSEFQNYQLKPY 489
+ + ++ +S + N +K Y
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGY 438
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 108 TMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGY 167
M+ + +FD +L+ +M + S+TPN ++ LI +C+ G
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL------------------GICEVGN 775
Query: 168 VKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYN 227
+++A +VF+ +R+ +P ++ L+ CKL + A +++M+ G P + +
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 228 VLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLS 287
VL+ G+ +K +ER VF + + G D ++ I++ + +
Sbjct: 836 VLICGLYKK---GEKER-------GTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAF 885
Query: 288 LDKFRMMKEQGICPTVATYTSVIK 311
+ F +M++ G + TY+ +I+
Sbjct: 886 YELFNVMEKNGCKFSSQTYSLLIE 909
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 189/435 (43%), Gaps = 39/435 (8%)
Query: 37 LVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFNYAKSLPNPP 96
++ + ++ + N + ME +L + ++ K A F +A +
Sbjct: 97 ILHEAIMANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYS 156
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI--------------- 141
+++ +ID ++ + + ++++ +M N + LV +
Sbjct: 157 HEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTH 216
Query: 142 -------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL 194
+R+ T+ F +LLD LCK G VK E RH R PD + VL
Sbjct: 217 VQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVK-EGEALLRRMRH-RVKPDANTFNVL 274
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
+GWC++ + A L EM+E G +P TY ++ C+ + +A
Sbjct: 275 FFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQA----------GMVDEAAD 324
Query: 255 VFDEMRERGIE---PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
+FD M +G P +F++++ ++ K + + M G P V+TY VI+
Sbjct: 325 LFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 384
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
+ ++++A DEM G P VTYNCF + + D ALKL+ +M E C+
Sbjct: 385 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE-SRCA 443
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P+ TY +L+ MF + D W +M + D++ Y +I+GL + + +EAC
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFL 503
Query: 432 FVEMIEKGF-LPQKV 445
E++ KG LP +V
Sbjct: 504 LEEVVNKGLKLPYRV 518
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 38/336 (11%)
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI---YGWCK 200
++S TK ++ F +++D L Y+K R N V + VL+ +C+
Sbjct: 168 ILSSTKYKNKQFRIVIDML---DYMK-------------RNNKTVVLVDVLLEILRKYCE 211
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
+ + + +P + +N+LL+ +C K L +++ + + MR
Sbjct: 212 RYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALC-KCGL---------VKEGEALLRRMR 261
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
R ++PD +F+++ + R P+ ++ M E G P TY + I G ++
Sbjct: 262 HR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 321 DAEGLFDEMVRSGVS---PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+A LFD M+ G + P A T+ A+ +L +M G C P TY
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG-CLPDVSTY 379
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
+++ A+ + + +M G PD+ Y + LCE +K EA + + M+E
Sbjct: 380 KDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE 439
Query: 438 KGFLPQKVTFETLYRGLIQSD----MLRTWRRLKKK 469
P T+ L + D TW + K+
Sbjct: 440 SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR 475
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 181/418 (43%), Gaps = 65/418 (15%)
Query: 93 PNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----------- 141
P P + +++ LI + K +F A + +M L P+ T+ LI
Sbjct: 282 PKPDVI--TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 142 -RRLVSDTKTTS---EHFTV--LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
R+V D + FT L+D LC G A +FN P+V +Y LI
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN-EALGKGIKPNVILYNTLI 398
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
G G + A NEM E+G+ P V T+N+L+NG+C+ + DAD +
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM----------GCVSDADGL 448
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
M +G PD+ +F+I++H YS K + +L+ +M + G+ P V TY S++ L
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 316 CGRLED-----------------------------------AEGLFDEMVRSGVSPCAVT 340
+ ED A GL +EM V+P AVT
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
+ + D D A LF+KM+E S + TY +++ F + + + ++++++M
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
+ +GPD Y L++ G C+ +F +EM+E GF+P T + L D
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 173/401 (43%), Gaps = 45/401 (11%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
L S+F+ L+ + K +L+ ++ +R + PN T+ + I+ L +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE------- 266
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
LD G V++ + + PDV Y LIYG CK + + A+ +L +MV
Sbjct: 267 --LD-----GAVRMVGCLIEQGPK-----PDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERF-------------------------ERTIRD 251
G+EP+ TYN L+ G C+ + ER E
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A +F+E +GI+P+V ++ ++ S + M E+G+ P V T+ ++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
L G + DA+GL M+ G P T+N Y + ++AL++ M ++G+
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV-D 493
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P +TY LL K V E ++ M E G P+L + +L+ LC +K EA
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 432 FVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
EM K P VTF TL G ++ L L +K++E
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 173/417 (41%), Gaps = 52/417 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTV-LL 159
S++ ++ + FD A ++ M R +TP+ +F + R+ S KT+ H + LL
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI---RMKSFCKTSRPHAALRLL 169
Query: 160 DTLCKYG-------YVKLAAEVFNGNKRHCRFNPDVKM-----------YTVLIYGWCKL 201
+ + G Y + + N + + KM + L+ CK
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF---------------- 245
G V+ + L+++++RG+ PN+ TYN+ + G+C++ L R
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 246 ---------ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKE 296
++A+ +M G+EPD +++ ++ Y + QL+
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 297 QGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
G P TY S+I L G A LF+E + G+ P + YN K +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 357 ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
A +L +M E GL P T+ +L+ K + + + M G PD+ + +LI
Sbjct: 410 AAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 469
HG + K A + M++ G P T+ +L GL ++ D++ T++ + +K
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 140/329 (42%), Gaps = 12/329 (3%)
Query: 147 DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVET 206
D + T + ++ L GY A +V+ R PDV +T+ + +CK R
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYM-RMRDRGITPDVYSFTIRMKSFCKTSRPHA 164
Query: 207 AQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
A LN M +G E NVV Y C V EE F+ + ++F +M G+
Sbjct: 165 ALRLLNNMSSQGCEMNVVAY-------CTVVGGFYEENFKA---EGYELFGKMLASGVSL 214
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
+++F+ +L V + + + ++G+ P + TY I+ L G L+ A +
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
++ G P +TYN A KM +GL P ++TY L+ + K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL-EPDSYTYNTLIAGYCK 333
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
M+ + + I D +G PD Y LI GLC + A F E + KG P +
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESI 475
+ TL +GL M+ +L ++ E+ +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 144/354 (40%), Gaps = 57/354 (16%)
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
+R+ V T S + +V+ + L YG + EV + + + +Y + + +
Sbjct: 30 MRKEVGFKHTLSTYRSVI-EKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGR 88
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
G+V+ A + M EP V +YN +++ L F++ A KV+ MR
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMS------VLVDSGYFDQ----AHKVYMRMR 138
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+RGI PDV SF+I + + + +P +L M QG V Y +V+ G E
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG-----GFYE 193
Query: 321 D---AEG--LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH 375
+ AEG LF +M+ SGVS C T+N + + D KL K
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK------------ 241
Query: 376 TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM 435
V+K GV P+L Y L I GLC+R + A + +
Sbjct: 242 ----------------VIKR--------GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 436 IEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
IE+G P +T+ L GL ++ + K+ E + S N + Y
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 30/244 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ L++ + K +F+ + M ++ PN TF +LL+
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF------------------NILLE 539
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER-GI 219
+LC+Y + A + K NPD + LI G+CK G ++ A + +M E +
Sbjct: 540 SLCRYRKLDEALGLLEEMKNK-SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
+ TYN++++ K++ + A+K+F EM +R + PD ++ +++ +
Sbjct: 599 SSSTPTYNIIIHAFTEKLN----------VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ L M E G P++ T VI CL R+ +A G+ MV+ G+ P AV
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Query: 340 TYNC 343
C
Sbjct: 709 NTIC 712
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 199/456 (43%), Gaps = 35/456 (7%)
Query: 20 RLALRHFTSSTDETDAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHS 79
++A+ F S+ D+ + + LQ A++ SL GI
Sbjct: 77 QVAIDSFLSAEDK-----LRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSG 131
Query: 80 KIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV 139
+ ++ F++A P S+ +++ + + + F ++ M + P+ +
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTI 191
Query: 140 L---------IRRLVS--------DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHC 182
+RR + K ++E F LL LC+ +V A VFN K +
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNI 251
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
F D Y ++I GW KLG VE + L EMVE G P+ ++Y+ L+ G+ R
Sbjct: 252 PF--DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT------ 303
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
I D+ ++FD ++ +G PD ++ ++ + A S+ +R M ++ P
Sbjct: 304 ----GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPN 359
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
+ TY+ ++ L ++ DA +F+EM+ GV P F K +A+ +++
Sbjct: 360 LETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQ 419
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
K ++ G C + Y +LL+ + G++ +W +M+ESG D+++Y ++ GLC
Sbjct: 420 KSRKAG-CRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCII 478
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
A E + KGF P + + L L+ S+
Sbjct: 479 GHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASN 514
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 66/326 (20%)
Query: 76 KHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPS 135
+ H A S+FN K N P S++++I +K+ + + +++ EM + P+
Sbjct: 234 RSHVSAAKSVFNAKKG--NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCL 291
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
++ + L++ L + G + + E+F+ N +H PD +Y +I
Sbjct: 292 SY------------------SHLIEGLGRTGRINDSVEIFD-NIKHKGNVPDANVYNAMI 332
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
+ + + + M++ EPN+ TY+ L++G+ + R + DA ++
Sbjct: 333 CNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG----------RKVSDALEI 382
Query: 256 FDEMRERGIEPD---VTSF------------SIVLHVYSRAHKPQLSLDKFRM------- 293
F+EM RG+ P VTSF ++V++ SR ++S +++
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 294 -------------MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
M+E G V Y ++ L G LE+A + +E +R G P
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFV 502
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKE 366
Y+ + + A KLF K+K+
Sbjct: 503 YSRLSSKLMASNKTELAYKLFLKIKK 528
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 209/453 (46%), Gaps = 70/453 (15%)
Query: 86 FNYAKSLPNPPLSHS--SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRR 143
F ++P S +++ +I+ + K +++ A ++ EM + L+P+ +T+ L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 144 LV--SDTKTTSEHFT------VLLDTLCKYGYVKLAAEVFNGNKRHCRFN--------PD 187
D T + F+ V+ D +C + L N +K FN PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFER 247
+YT+LI G+C+ G + A + NEM+++G +VVTYN +L+G+C++ +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR----------K 459
Query: 248 TIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ---------- 297
+ +ADK+F+EM ER + PD + +I++ + + Q +++ F+ MKE+
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 298 -------------------------GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
I PT +Y+ ++ L S G L +A ++DEM+
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMI-- 390
+ P + N K Y +A +KM +G P +Y L+ F++ + +
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV-PDCISYNTLIYGFVREENMSK 638
Query: 391 --GVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
G+VK++ + ++ G+ PD+ Y ++HG C + + +EA +MIE+G P + T+
Sbjct: 639 AFGLVKKM--EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 449 TLYRGLIQSDMLRTWRRLKKKLDEESISFGSEF 481
+ G + D L R+ ++ + S +F
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 183/463 (39%), Gaps = 97/463 (20%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH-- 154
+S + + LI ++ ++ +LAW + E+ + + N T +++ L D K
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257
Query: 155 ---------------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
+ L+ G ++ A E+ N F+P V Y +I G C
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVINGLC 316
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
K G+ E A+ EM+ G+ P+ TY LL C+K + + +KVF +M
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK----------GDVVETEKVFSDM 366
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
R R + PD+ FS ++ +++R+ +L F +KE G+ P YT +I+ G +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE------------- 366
A L +EM++ G + VTYN RK A KLF +M E
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 367 -DGLCSPT--------------------AHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
DG C TY LL F K I KEIW DM +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 406 GPDLDLYTLLIHGLCERKKWREACQFFVEMIEK--------------------------- 438
P Y++L++ LC + EA + + EMI K
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 439 --------GFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 473
GF+P +++ TL G ++ + + L KK++EE
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 176/425 (41%), Gaps = 64/425 (15%)
Query: 95 PPLSHSSFHL--LIDTMAKVRQFDLAWQLITEMDQRS-------LTPNPSTFLVLIRRLV 145
P H+S L +I + + + A + M +RS + STF
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTF-------- 158
Query: 146 SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
S+ + F +L+ T + ++ A E F R F + LI ++G VE
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFT-LLRSKGFTVSIDACNALIGSLVRIGWVE 217
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
A E+ G+ NV T N+++N +C+ + F +++E+G+
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF----------LSQVQEKGVY 267
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
PD+ +++ ++ YS + + + M +G P V TY +VI L G+ E A+ +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 326 FDEMVRSGVSPCAVTYNCF----------------FKEYRGRK----------------- 352
F EM+RSG+SP + TY F + R R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 353 --DADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLD 410
+ D AL F +KE GL P Y +L+Q + + MI V + +M + G D+
Sbjct: 388 SGNLDKALMYFNSVKEAGLI-PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 411 LYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
Y ++HGLC+RK EA + F EM E+ P T L G + L+ L +K+
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 471 DEESI 475
E+ I
Sbjct: 507 KEKRI 511
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 176/376 (46%), Gaps = 34/376 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ ++++ + K DLA L+ +M+Q + P V+I + ++D
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG-----VVI-------------YNTIID 264
Query: 161 TLCKYGYVKLAAEVFN--GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG 218
LC Y V A +F NK P+V Y LI C GR A L++M+ER
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKG---IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
I PNVVT++ L++ + E + +A+K++DEM +R I+PD+ ++S +++ +
Sbjct: 322 INPNVVTFSALIDAFVK----------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+ + F +M + P V TY ++IK R+++ LF EM + G+
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
VTY + ++ D+A +FK+M DG+ P TY +LL + ++
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
++ S + PD+ Y ++I G+C+ K + F + KG P VT+ T+ G +
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 459 MLRTWRRLKKKLDEES 474
+ L +++ EE
Sbjct: 551 LKEEADALFREMKEEG 566
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 171/352 (48%), Gaps = 30/352 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ +ID + + + A L TEMD + + PN T+ LIR
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR------------------C 300
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
LC YG A+ + + + NP+V ++ LI + K G++ A+ +EM++R I+P
Sbjct: 301 LCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
++ TY+ L+NG C +H + +A +F+ M + P+V +++ ++ + +A
Sbjct: 360 DIFTYSSLINGFC----MHDR------LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ ++ FR M ++G+ TYT++I ++A+ +F +MV GV P +TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
+ ++AL +F+ ++ + P +TY ++++ KA + +++ +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKM-EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
GV P++ YT ++ G C + EA F EM E+G LP T+ TL R
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 179/395 (45%), Gaps = 33/395 (8%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A++LF + KS P P + F L+ +AK+ +FDL L +M ++ N T+
Sbjct: 65 AVNLFGDMVKSRPFPSIVE--FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY--- 119
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
++L++ C+ + LA V + PD+ L+ G+C
Sbjct: 120 ---------------SILINCFCRRSQLSLALAVL-AKMMKLGYEPDIVTLNSLLNGFCH 163
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
R+ A S + +MVE G +P+ T+N L++G+ R +A + D M
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR----------HNRASEAVALVDRMV 213
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+G +PD+ ++ IV++ + L+L + M++ I P V Y ++I L + +
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
DA LF EM G+ P VTYN + A +L M E + +P T+ L
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSAL 332
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ F+K + ++++ +M + + PD+ Y+ LI+G C + EA F MI K
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
P VT+ TL +G ++ + L +++ + +
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 160/357 (44%), Gaps = 29/357 (8%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLI-----------------RRLVSDTKTTSEHFTVLLD 160
A L+ +M + P+ TF LI R +V + + ++++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LCK G + LA + + P V +Y +I C V A + EM +GI
Sbjct: 230 GLCKRGDIDLALSLLK-KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNVVTYN L+ +C + R DA ++ +M ER I P+V +FS ++ + +
Sbjct: 289 PNVVTYNSLIRCLCN---------YGRW-SDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
K + + M ++ I P + TY+S+I RL++A+ +F+ M+ P VT
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN K + K D ++LF++M + GL T TY L+ F +A + +++ M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDNAQIVFKQM 457
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
GV PD+ Y++L+ GLC K A F + P T+ + G+ ++
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 11/274 (4%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ A + +MV+ P++V ++ LL+ + + +F+ I + ++M+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM------NKFDLVI----SLGEQMQNL 110
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI ++ ++SI+++ + R + L+L M + G P + T S++ R+ DA
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L +MV G P + T+N A A+ L +M G C P TYG+++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVN 229
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K I + + + M++ + P + +Y +I LC K +A F EM KG P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
VT+ +L R L RL + E I+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 38/249 (15%)
Query: 235 RKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
RK+S++ + + DA +F +M + P + FS +L ++ +K L + M
Sbjct: 50 RKISINRLNDLK--LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 107
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
+ GI + TY+ +I C +L A + +M++ G P VT N
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS----------- 156
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
LL F + I + M E G PD +
Sbjct: 157 -------------------------LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
LIHGL + EA M+ KG P VT+ + GL + + L KK+++
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 475 ISFGSEFQN 483
I G N
Sbjct: 252 IEPGVVIYN 260
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 192/392 (48%), Gaps = 31/392 (7%)
Query: 85 LFNYAKSLPNPPLSHS--SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR 142
+ ++ K L ++H+ + +++I+ + + A+ ++ ++ + P+ +TF LI+
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 143 RLVSDTKTTSE-----------------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN 185
L + K + + +++ +C+ G LA ++ +
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVK 225
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
DV Y+ +I C+ G ++ A S EM +GI+ +VVTYN L+ G+C+ +
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN----- 280
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
D + +M R I P+V +F+++L V+ + K Q + + ++ M +GI P + T
Sbjct: 281 -----DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y +++ RL +A + D MVR+ SP VT+ K Y K D +K+F+ +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
+ GL + A TY +L+Q F ++ I + +E++++M GV PD+ Y +L+ GLC+ K
Sbjct: 396 KRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+A + F ++ + V + T+ G+ +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 162/357 (45%), Gaps = 34/357 (9%)
Query: 82 ALSLFNYAKSLPNPPLSHS--SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV 139
A+SLF K + + S +++ L+ + K +++ L+ +M R + PN TF V
Sbjct: 247 AISLF---KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 140 LIRRLVSDTKTTSEH-----------------FTVLLDTLCKYGYVKLAAEVFNGNKRHC 182
L+ V + K + + L+D C + A + + R+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN- 362
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ +PD+ +T LI G+C + RV+ + +RG+ N VTY++L+ G C+
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ------- 415
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
I+ A+++F EM G+ PDV ++ I+L K + +L+ F +++ +
Sbjct: 416 ---SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
+ YT++I+ + G++EDA LF + GV P +TY + A L +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
KM+EDG +P TY L++ L+ + ++ +MK G D ++I L
Sbjct: 533 KMEEDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 1/219 (0%)
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
++ GI ++ + +I+++ + R K + + + G P T+ ++IK L G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
++ +A L D MV +G P VTYN D AL L +KM+E + TY
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV-KADVFTY 231
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
++ + I ++++M+ G+ + Y L+ GLC+ KW + +M+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 438 KGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
+ +P +TF L ++ L+ L K++ IS
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 186/390 (47%), Gaps = 31/390 (7%)
Query: 85 LFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL 144
F+ + P P ++ F L+ ++K++++D+ L +M + N T +L+
Sbjct: 69 FFHMVQCRPLPSIA--DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 145 VSDTKTTSE-----------------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPD 187
++ + F LL+ C+ V A +F+ + P+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD-QMVGMGYKPN 185
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFER 247
V +Y +I G CK +V+ A LN M + GI P+VVTYN L++G+C R+
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC------SSGRWS- 238
Query: 248 TIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
DA ++ M +R I PDV +F+ ++ + + + + + M + + P + TY+
Sbjct: 239 ---DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKED 367
+I L RL++AE +F MV G P VTY+ Y K + +KLF +M +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
G+ T TY +L+Q + +A + V +EI+R M GV P++ Y +L+HGLC+ K +
Sbjct: 356 GVVRNTV-TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
A +M + G VT+ + RG+ ++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 176/363 (48%), Gaps = 31/363 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL +F+ + P + ++ +ID + K +Q D A L+ M++ + P+ T+ LI
Sbjct: 170 ALYMFDQMVGMGYKP-NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
L S + + T ++ + K E++ PDV + LI K
Sbjct: 229 SGLCSSGRWSDA--TRMVSCMTK-------REIY----------PDVFTFNALIDACVKE 269
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
GRV A+ F EM+ R ++P++VTY++L+ G+C L +A+++F M
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD----------EAEEMFGFMVS 319
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+G PDV ++SI+++ Y ++ K + + F M ++G+ TYT +I+ G+L
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
AE +F MV GV P +TYN + AL + M+++G+ TY +++
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM-DADIVTYNIII 438
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
+ KA + +I+ + G+ PD+ YT ++ GL ++ REA F +M E G L
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 442 PQK 444
P +
Sbjct: 499 PNE 501
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 11/279 (3%)
Query: 192 TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD 251
+L+ +C+ ++ A SFL +M++ G EP++VT+ LLNG CR ++ D
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY----------D 169
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A +FD+M G +P+V ++ ++ ++ + +LD M++ GI P V TY S+I
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
L S GR DA + M + + P T+N A + +++M L
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-D 288
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P TY +L+ + +E++ M G PD+ Y++LI+G C+ KK +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 432 FVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
F EM ++G + VT+ L +G ++ L + +++
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 9/182 (4%)
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV----S 335
R K SLD F M + P++A ++ ++ ++ + + L+++M G+
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
C + NCF + AL KM + G P+ T+G LL F + D +
Sbjct: 118 TCNILLNCFCR----CSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
++ M G P++ +Y +I GLC+ K+ A M + G P VT+ +L GL
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 456 QS 457
S
Sbjct: 233 SS 234
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 169/360 (46%), Gaps = 30/360 (8%)
Query: 94 NPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE 153
N L + ++ID + K D A+ L EM+ + +T N T+
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY---------------- 301
Query: 154 HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNE 213
+L+ C G A++ + + NP+V ++VLI + K G++ A+ E
Sbjct: 302 --NILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
M+ RGI P+ +TY L++G C+ E + A+++ D M +G +P++ +F+I
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCK----------ENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
+++ Y +A++ L+ FR M +G+ TY ++I+ G+L A+ LF EMV
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
V P VTY +++ AL++F+K+++ + Y +++ A +
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM-ELDIGIYNIIIHGMCNASKVDDA 527
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+++ + GV P + Y ++I GLC++ EA F +M E G P T+ L R
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 191/409 (46%), Gaps = 38/409 (9%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF + S P P + F L +AK +Q+DL L +M+ + + N T
Sbjct: 72 AIDLFRDMIHSRPLPTVI--DFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL--- 126
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
+++++ C+ + LA G + P+ ++ LI G C
Sbjct: 127 ---------------SIMINCFCRCRKLCLAFSAM-GKIIKLGYEPNTITFSTLINGLCL 170
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
GRV A ++ MVE G +P+++T N L+NG+C L +E +A + D+M
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLC----LSGKEA------EAMLLIDKMV 220
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
E G +P+ ++ VL+V ++ + L+++ R M+E+ I Y+ +I L G L+
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
+A LF+EM G++ +TYN + D KL + M + + +P T+ VL
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI-NPNVVTFSVL 339
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ F+K + +E+ ++M G+ PD YT LI G C+ +A Q M+ KG
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 441 LPQKVTFETLYRGLIQS----DMLRTWRRLK-KKLDEESISFGSEFQNY 484
P TF L G ++ D L +R++ + + +++++ + Q +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 183/407 (44%), Gaps = 50/407 (12%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS-DTKTTSEHFTVLLDTLC 163
L+D M ++ + T ++ L+ + ++LI ++V + + + +L+ +C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 164 KYGYVKLAAEVFNG-NKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPN 222
K G LA E+ +R+ + D Y+++I G CK G ++ A + NEM +GI N
Sbjct: 240 KSGQTALAMELLRKMEERNIKL--DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 223 VVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAH 282
++TYN+L+ G C R++ D K+ +M +R I P+V +FS+++ + +
Sbjct: 298 IITYNILIGGFCNA------GRWD----DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 347
Query: 283 KPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYN 342
K + + + + M +GI P TYTS+I L+ A + D MV G P T+N
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 343 CFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
Y D L+LF+KM G+ + T TY L+Q F + + V KE++++M
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 403 SGVGP-----------------------------------DLDLYTLLIHGLCERKKWRE 427
V P D+ +Y ++IHG+C K +
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
A F + KG P T+ + GL + L L +K++E+
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 31/302 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
+F +LID+ K + A +L EM R + P+ T+ LI + +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCR-FNPDVKMYTVLIYGWCKLG 202
F +L++ CK + E+F K R D Y LI G+C+LG
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFR--KMSLRGVVADTVTYNTLIQGFCELG 452
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
++ A+ EMV R + PN+VTY +LL+G+C + E+ E +F+++ +
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD--NGESEKALE--------IFEKIEKS 502
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
+E D+ ++I++H A K + D F + +G+ P V TY +I L G L +A
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
E LF +M G +P TYN + + G DA ++KL +++K G S A T +++
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF-SVDASTIKMVID 621
Query: 383 MF 384
M
Sbjct: 622 ML 623
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 103/267 (38%), Gaps = 41/267 (15%)
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
DA +F +M P V FS + ++ + L L + M+ +GI + T + +I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 311 KCLASC-----------------------------------GRLEDAEGLFDEMVRSGVS 335
C C GR+ +A L D MV G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
P +T N A+ L KM E G C P A TYG +L + K+ + E
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
+ R M+E + D Y+++I GLC+ A F EM KG +T+ L G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 456 QS----DMLRTWR-RLKKKLDEESISF 477
+ D + R +K+K++ ++F
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTF 336
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 173/367 (47%), Gaps = 33/367 (8%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI--------------- 141
S F +LI K+ F+ A ++++ + + TPN ++ L+
Sbjct: 137 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 196
Query: 142 -RRLVSDTKTTSE-HFTVLLDTLCKYGYVKLAAEVFNG--NKRHCRFNPDVKMYTVLIYG 197
RR+ S S + ++L T + K A EVF +++ PD KMY ++IY
Sbjct: 197 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ K G E A+ + MV +G+ + VTYN L++ FE + ++ K++D
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-------------FETSYKEVSKIYD 303
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
+M+ I+PDV S+++++ Y RA + + +L F M + G+ PT Y ++ A G
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+E A+ +F M R + P +Y Y D + A K FK++K DG P TY
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF-EPNIVTY 422
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
G L++ + KA+ + + E++ M+ SG+ + + T ++ K + A ++ EM
Sbjct: 423 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 482
Query: 438 KGFLPQK 444
G P +
Sbjct: 483 CGVPPDQ 489
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 23/293 (7%)
Query: 175 FNGNKRHCRF------NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNV 228
FNG +R P+V YT L+ + + G+ A++ M G EP+ +TY +
Sbjct: 155 FNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 214
Query: 229 LLNGVCRKVSLHPEERFERTIRDADKVFDEM---RERGIEPDVTSFSIVLHVYSRAHKPQ 285
+L + ++F ++A++VF+ + ++ ++PD + +++++Y +A +
Sbjct: 215 ILK------TFVEGDKF----KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 286 LSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFF 345
+ F M +G+ + TY S++ S ++ ++D+M RS + P V+Y
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 346 KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
K Y + + AL +F++M + G+ PT Y +LL F + M+ K +++ M+ +
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGV-RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 406 GPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
PDL YT ++ A +FF + GF P VT+ TL +G +++
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A++V + + G P+V S++ ++ Y R K + FR M+ G P+ TY ++K
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 312 CLASCGRLEDAEGLFDEMV---RSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
+ ++AE +F+ ++ +S + P Y+ Y+ + + A K+F M G
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
+ T TY L+ V +I+ M+ S + PD+ Y LLI ++ EA
Sbjct: 278 VPQSTV-TYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEA 333
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
F EM++ G P + L S M+ + + K + + I
Sbjct: 334 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+ LLI + R+ + A + EM + P T + + +LLD
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRP------------------THKAYNILLD 357
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
G V+ A VF +R R PD+ YT ++ + +E A+ F + G E
Sbjct: 358 AFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+VTY L+ G + + +V+++MR GI+ + T + ++ R
Sbjct: 417 PNIVTYGTLIKGYAKA----------NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 466
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
+L ++ M+ G+ P ++ ++ LE+A+ L
Sbjct: 467 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 177/376 (47%), Gaps = 34/376 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +++ + K DLA L+ +M++ + + V+I +T ++D
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD-----VVI-------------YTTIID 263
Query: 161 TLCKYGYVKLAAEVFN--GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG 218
LC Y V A +F NK P+V Y LI C GR A L++M+ER
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKG---IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
I PNVVT++ L++ + E + +A+K++DEM +R I+PD+ ++S +++ +
Sbjct: 321 INPNVVTFSALIDAFVK----------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+ + F +M + P V TY ++IK R+E+ LF EM + G+
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
VTYN + D D A K+FKKM DG+ P TY +LL K + ++
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV-PPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
+++S + PD+ Y ++I G+C+ K + F + KG P + + T+ G +
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 459 MLRTWRRLKKKLDEES 474
+ L +++ E+
Sbjct: 550 LKEEADALFREMKEDG 565
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 184/413 (44%), Gaps = 34/413 (8%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF +S P P + F+ L+ +AK+ +FDL L M ++ + ++ +L
Sbjct: 64 AVDLFGEMVQSRPLPSIVE--FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGY---VKLAAEVFNG---NKRHCR----------- 183
I ++ +L + K GY + + + NG KR
Sbjct: 122 INCFCRRSQLPLA--LAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 184 -FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ P+ + LI+G + A + ++ MV RG +P++ TY ++NG+C++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR------ 233
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
I A + +M + IE DV ++ ++ +L+ F M +GI P
Sbjct: 234 ----GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
V TY S+I+CL + GR DA L +M+ ++P VT++ + A KL+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+M + + P TY L+ F D + K ++ M P++ Y LI G C+
Sbjct: 350 EMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
K+ E + F EM ++G + VT+ TL +GL Q+ +++ KK+ + +
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 159/360 (44%), Gaps = 44/360 (12%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR------------RLVSD-- 147
+ +ID + + + A L TEMD + + PN T+ LIR RL+SD
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 148 ---TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
F+ L+D K G + A ++++ + +PD+ Y+ LI G+C R+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 376
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD------------- 251
+ A+ M+ + PNVVTYN L+ G C+ + R +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 252 ------------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
A K+F +M G+ PD+ ++SI+L + K + +L F +++ +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
P + TY +I+ + G++ED LF + GV P + Y + + + A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
LF++MKEDG P + TY L++ L+ E+ ++M+ G D +++I+ L
Sbjct: 557 LFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 11/274 (4%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ A EMV+ P++V +N LL+ + + +F+ I ++ M+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM------NKFDLVISLGER----MQNL 109
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
I D+ S++I+++ + R + L+L M + G P + T +S++ R+ +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D+M P VT+N A A+ L +M G C P TYG ++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVN 228
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K I + + + M++ + D+ +YT +I LC K +A F EM KG P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
VT+ +L R L RL + E I+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 178/376 (47%), Gaps = 34/376 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +++ + K DLA L+ +M++ + + V+I + ++D
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD-----VVI-------------YNTIID 266
Query: 161 TLCKYGYVKLAAEVFN--GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG 218
LCKY ++ A +F NK PDV Y+ LI C GR A L++M+ER
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKG---IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
I PNVVT++ L++ + E + +A+K++DEM +R I+PD+ ++S +++ +
Sbjct: 324 INPNVVTFSALIDAFVK----------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+ + F +M + P V TY+++IK R+E+ LF EM + G+
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
VTY + +D D+A +FK+M G+ P TY +LL K + ++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGV-HPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
++ S + PD+ Y ++I G+C+ K + + F + KG P + + T+ G +
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 459 MLRTWRRLKKKLDEES 474
L KK+ E+
Sbjct: 553 SKEEADSLLKKMKEDG 568
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 179/395 (45%), Gaps = 33/395 (8%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF + KS P P + F+ L+ +AK+ +F+L L +M ++ + T+
Sbjct: 67 AVDLFGDMVKSRPFPSIVE--FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY--- 121
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
++ ++ C+ + LA V + PD+ + L+ G+C
Sbjct: 122 ---------------SIFINCFCRRSQLSLALAVL-AKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
R+ A + +++MVE G +P+ T+ L++G+ LH + +A + D+M
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL----FLHNKAS------EAVALVDQMV 215
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+RG +PD+ ++ V++ + L+L + M++ I V Y ++I L ++
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
DA LF EM G+ P TY+ A +L M E + +P T+ L
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSAL 334
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ F+K + ++++ +M + + PD+ Y+ LI+G C + EA F MI K
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
P VT+ TL +G ++ + L +++ + +
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 160/361 (44%), Gaps = 47/361 (13%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR------------RLVSD-- 147
++ +ID + K + D A L TEMD + + P+ T+ LI RL+SD
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 148 ---TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
F+ L+D K G + A ++++ + +PD+ Y+ LI G+C R+
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 379
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI--------------- 249
+ A+ M+ + PNVVTY+ L+ G C+ + R +
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 250 -------RDADK---VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
RD D VF +M G+ P++ +++I+L + K ++ F ++ +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
P + TY +I+ + G++ED LF + GVSP + YN + + + A
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD---LDLYTLLI 416
L KKMKEDG P + TY L++ L+ E+ ++M+ G D + L T ++
Sbjct: 560 LLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Query: 417 H 417
H
Sbjct: 619 H 619
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 11/274 (4%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+V+ A +MV+ P++V +N LL+ V + +FE I + ++M+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM------NKFELVI----SLGEQMQTL 112
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI D+ ++SI ++ + R + L+L M + G P + T +S++ R+ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D+MV G P T+ A A+ L +M + G C P TYG ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVN 231
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K I + + + M++ + D+ +Y +I GLC+ K +A F EM KG P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
T+ +L L RL + E I+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 175/389 (44%), Gaps = 70/389 (17%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +++ + K DLA L+ +M+ + N V+I F ++D
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN-----VVI-------------FNTIID 266
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+LCKY +V++A ++F + P+V Y LI C GR A L+ M+E+ I
Sbjct: 267 SLCKYRHVEVAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNVVT+N L++ + E + +A+K+ +EM +R I+PD +++++++ +
Sbjct: 326 PNVVTFNALIDAFFK----------EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
++ + F+ M + P + TY ++I C R+ED LF EM + G+ VT
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKED--------------GLCSPTAHTYGVL------ 380
Y + + D DSA +FK+M + GLCS YG L
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS-----YGKLDTALVI 490
Query: 381 ----------LQMFLKADMI------GVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
L +F+ MI G V E W + PD+ Y +I GLC ++
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRL 550
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRG 453
+EA F +M E G LP T+ TL R
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 182/409 (44%), Gaps = 38/409 (9%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF + KS P P + F+ L+ +AK+ +F+L L +M ++ + T+
Sbjct: 67 AVDLFGDMVKSRPFPSIVE--FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY--- 121
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
++ ++ C+ + LA V + PD+ + L+ G+C
Sbjct: 122 ---------------SIFINCFCRRSQLSLALAVL-AKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
R+ A + +++MVE G +P+ T+ L++G+ LH + +A + D+M
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL----FLHNKAS------EAVALVDQMV 215
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+RG +PD+ ++ V++ + L+L+ M+ I V + ++I L +E
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
A LF EM G+ P VTYN A +L M E + +P T+ L
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI-NPNVVTFNAL 334
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ F K + +++ +M + + PD Y LLI+G C + EA Q F M+ K
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 441 LPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESISFGSEFQNY 484
LP T+ TL G + D + +R + ++ L ++++ + Q +
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 163/377 (43%), Gaps = 60/377 (15%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F+ +ID++ K R ++A L TEM+ + + PN T+ L++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY------------------NSLINC 302
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
LC YG A+ + + N + NP+V + LI + K G++ A+ EM++R I+P
Sbjct: 303 LCNYGRWSDASRLLS-NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
+ +TYN+L+NG C + +A ++F M + P++ +++ +++ + +
Sbjct: 362 DTITYNLLINGFC----------MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ + ++ FR M ++G+ TYT++I+ G + A+ +F +MV + V +TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 342 NCFFKEYRGRKDADSALKLFKKMKE--------------DGLCS---------------- 371
+ D+AL +FK +++ +G+C
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI 531
Query: 372 -PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
P TY ++ ++ +++R MKE G P+ Y LI + +
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 431 FFVEMIEKGFLPQKVTF 447
EM GF+ T
Sbjct: 592 LIKEMRSSGFVGDASTI 608
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 16/282 (5%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+V+ A +MV+ P++V +N LL+ V + +FE I + ++M+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM------NKFELVI----SLGEQMQTL 112
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI D+ ++SI ++ + R + L+L M + G P + T +S++ R+ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D+MV G P T+ A A+ L +M + G C P TYG ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVN 231
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K I + + M+ + + ++ ++ +I LC+ + A F EM KG P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 443 QKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESISFGS 479
VT+ +L L SD R L+KK++ ++F +
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 92 LPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI---------- 141
LPN +++ LI+ K ++ + +L EM QR L N T+ +I
Sbjct: 395 LPNI----QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 142 ------RRLVSD-TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL 194
+++VS+ T +++LL LC YG + A +F ++ ++ +Y +
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFIYNTM 509
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I G CK G+V A + I+P+VVTYN +++G+C K R +++AD
Sbjct: 510 IEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSK----------RLLQEADD 556
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
+F +M+E G P+ +++ ++ R S + + M+ G +T + V L
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616
Query: 315 SCGRLE 320
GRL+
Sbjct: 617 D-GRLD 621
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 173/367 (47%), Gaps = 33/367 (8%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI--------------- 141
S F +LI K+ F+ A ++++ + + TPN ++ L+
Sbjct: 144 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 203
Query: 142 -RRLVSDTKTTSE-HFTVLLDTLCKYGYVKLAAEVFNG--NKRHCRFNPDVKMYTVLIYG 197
RR+ S S + ++L T + K A EVF +++ PD KMY ++IY
Sbjct: 204 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 263
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ K G E A+ + MV +G+ + VTYN L++ FE + ++ K++D
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-------------FETSYKEVSKIYD 310
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
+M+ I+PDV S+++++ Y RA + + +L F M + G+ PT Y ++ A G
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+E A+ +F M R + P +Y Y D + A K FK++K DG P TY
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF-EPNIVTY 429
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
G L++ + KA+ + + E++ M+ SG+ + + T ++ K + A ++ EM
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 489
Query: 438 KGFLPQK 444
G P +
Sbjct: 490 CGVPPDQ 496
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 23/293 (7%)
Query: 175 FNGNKRHCRF------NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNV 228
FNG +R P+V YT L+ + + G+ A++ M G EP+ +TY +
Sbjct: 162 FNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 221
Query: 229 LLNGVCRKVSLHPEERFERTIRDADKVFDEM---RERGIEPDVTSFSIVLHVYSRAHKPQ 285
+L + ++F ++A++VF+ + ++ ++PD + +++++Y +A +
Sbjct: 222 ILK------TFVEGDKF----KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 286 LSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFF 345
+ F M +G+ + TY S++ S ++ ++D+M RS + P V+Y
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 346 KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
K Y + + AL +F++M + G+ PT Y +LL F + M+ K +++ M+ +
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGV-RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 406 GPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
PDL YT ++ A +FF + GF P VT+ TL +G +++
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A++V + + G P+V S++ ++ Y R K + FR M+ G P+ TY ++K
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 312 CLASCGRLEDAEGLFDEMV---RSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
+ ++AE +F+ ++ +S + P Y+ Y+ + + A K+F M G
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
+ T TY L+ V +I+ M+ S + PD+ Y LLI ++ EA
Sbjct: 285 VPQSTV-TYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEA 340
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
F EM++ G P + L S M+ + + K + + I
Sbjct: 341 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+ LLI + R+ + A + EM + P T + + +LLD
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRP------------------THKAYNILLD 364
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
G V+ A VF +R R PD+ YT ++ + +E A+ F + G E
Sbjct: 365 AFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+VTY L+ G + + +V+++MR GI+ + T + ++ R
Sbjct: 424 PNIVTYGTLIKGYAKA----------NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 473
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
+L ++ M+ G+ P ++ ++ LE+A+ L
Sbjct: 474 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 175/410 (42%), Gaps = 70/410 (17%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------- 154
F ID K A + M + ++PN T+ +LI+ L D +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 155 ----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
++ L+D CK G ++ ++ + + PDV +Y VL+ G K G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE-DMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
A F +M+ + I NVV +N L++G CR RF+ +A KVF M GI
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL------NRFD----EALKVFRLMGIYGI 527
Query: 265 EPDVTSFSIVLHV------YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
+PDV +F+ V+ V + + KP + L F +M+ I +A VI L C R
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRG---------------------------- 350
+EDA F+ ++ + P VTYN Y
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 351 -------RKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
D D A+++F M E G P A TYG L+ F K+ I +++ +M+E
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
G+ P + Y+++I GLC+R + EA F + I+ LP V + L RG
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 148/307 (48%), Gaps = 24/307 (7%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F+ LID ++ +FD A ++ M + P+ +TF TT +++ D
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF------------TTVMRVSIMEDA 546
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
CK+ + ++F+ +R+ + + D+ + V+I+ K R+E A F N ++E +EP
Sbjct: 547 FCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 605
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
++VTYN ++ G C SL R + +A+++F+ ++ P+ + +I++HV +
Sbjct: 606 DIVTYNTMICGYC---SL-------RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ ++ F +M E+G P TY ++ + +E + LF+EM G+SP V+Y
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
+ R D A +F + + L P Y +L++ + K + ++ M
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAIDAKLL-PDVVAYAILIRGYCKVGRLVEAALLYEHML 774
Query: 402 ESGVGPD 408
+GV PD
Sbjct: 775 RNGVKPD 781
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 11/277 (3%)
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
C P+V + LI G+CK G ++ A M +RGIEP+++ Y+ L++G + L
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
K+F + +G++ DV FS + VY ++ + ++ M QGI P
Sbjct: 340 ----------GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V TYT +IK L GR+ +A G++ ++++ G+ P VTY+ + + S L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
+ M + G P YGVL+ K ++ M + ++ ++ LI G C
Sbjct: 450 EDMIKMGY-PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
++ EA + F M G P TF T+ R I D
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 33/322 (10%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ VL+D L K G + L A F+ +V ++ LI GWC+L R + A M
Sbjct: 464 YGVLVDGLSKQGLM-LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 215 VERGIEPNVVTYNVLL------NGVCR----KVSLHPEERFERT---------------- 248
GI+P+V T+ ++ + C+ + L + +R
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 249 -----IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
I DA K F+ + E +EPD+ +++ ++ Y + + F ++K P
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
T T +I L ++ A +F M G P AVTY C + D + + KLF++
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
M+E G+ SP+ +Y +++ K + I+ ++ + PD+ Y +LI G C+
Sbjct: 703 MQEKGI-SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 424 KWREACQFFVEMIEKGFLPQKV 445
+ EA + M+ G P +
Sbjct: 762 RLVEAALLYEHMLRNGVKPDDL 783
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 202/477 (42%), Gaps = 41/477 (8%)
Query: 24 RHFTSSTDETDAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIAL 83
R F+S + + A +SK + + + F+ ++SS+ +G + AL
Sbjct: 32 RGFSSDSAKALAAGISKAIKEGN--FNLLDSSV--YGSNLQRNETNLVLLSLESEPNSAL 87
Query: 84 SLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRR 143
F +A+ P ++ H+LI + FD+A ++ EM +T F VL
Sbjct: 88 KYFRWAEISGKDPSFYTIAHVLI----RNGMFDVADKVFDEM----ITNRGKDFNVLGS- 138
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ D ++ L++ C+YG V A E+F + + P +Y +L R
Sbjct: 139 -IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDR 196
Query: 204 VETAQSFLNEMVERGIEPNVVT-YNVLLNG------VCRKVSLH---PEERFERTIRDAD 253
V+ +++ GIEP+ V+ + +L+ V + + H E F I +
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 254 KVFDEMRERGIE---------------PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
KV + IE P+V +F +++ + + + + D F++M+++G
Sbjct: 257 KVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
I P + Y+++I G L LF + + GV V ++ Y D +A
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
++K+M G+ SP TY +L++ + I ++ + + G+ P + Y+ LI G
Sbjct: 377 VVYKRMLCQGI-SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
C+ R + +MI+ G+ P V + L GL + ++ R K+ +SI
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+ +F+ + P + ++ L+D +K + +++L EM ++ ++P+
Sbjct: 661 AIRMFSIMAEKGSKP-NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS-------- 711
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+VS +++++D LCK G V A +F+ + PDV Y +LI G+CK+
Sbjct: 712 --IVS--------YSIIIDGLCKRGRVDEATNIFH-QAIDAKLLPDVVAYAILIRGYCKV 760
Query: 202 GRVETAQSFLNEMVERGIEPN 222
GR+ A M+ G++P+
Sbjct: 761 GRLVEAALLYEHMLRNGVKPD 781
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 37/393 (9%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+ +F K P S ++ ++DT+ + + + + +M + PN T+ VL+
Sbjct: 130 AVEMFYRIKEFGCDP-SVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ L + K G KL E+ NK C PD YT +I C++
Sbjct: 189 KALCKNNKVD--------------GAKKLLVEM--SNKGCC---PDAVSYTTVISSMCEV 229
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G V+ + E+ ER EP V YN L+NG+C+ E + A ++ EM E
Sbjct: 230 GLVKEGR----ELAER-FEPVVSVYNALINGLCK----------EHDYKGAFELMREMVE 274
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+GI P+V S+S +++V + + +L+ M ++G P + T +S++K G D
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 322 AEGLFDEMVRS-GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
A L+++M+R G+ P V YN + + + A+ +F M+E G CSP TYG L
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG-CSPNIRTYGSL 393
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ F K + IW M SG P++ +YT ++ LC K++EA M ++
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 473
P TF +GL + L ++ ++++++
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 39/388 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRR-----LVSDTKTTSEHF 155
++++L+ + K + D A +L+ EM + P+ ++ +I LV + + +E F
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242
Query: 156 -------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ 208
L++ LCK K A E+ +P+V Y+ LI C G++E A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEK-GISPNVISYSTLINVLCNSGQIELAF 301
Query: 209 SFLNEMVERGIEPNVVTYNVLLNG----------------VCRKVSLHPEERFERT---- 248
SFL +M++RG PN+ T + L+ G + R L P T
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 249 ------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
I A VF M E G P++ ++ +++ +++ ++ + M G CP
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
V YT++++ L + ++AE L + M + +P T+N F K D A K+F+
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+M++ C P TY LL KA+ I + R++ GV Y L+HG C
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETL 450
A Q +M+ G P ++T +
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 163/392 (41%), Gaps = 51/392 (13%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE------- 153
S+ LI+ + Q +LA+ +T+M +R PN T L++ T
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 154 -----------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
+ L+ C +G + A VF+ + +P+++ Y LI G+ K G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS-HMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
++ A N+M+ G PNVV Y ++ +CR ++A+ + + M +
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR----------HSKFKEAESLIEIMSKE 451
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP-TVATYTSVIKCLASCGRLED 321
P V +F+ + A + + FR M++Q CP + TY ++ LA R+E+
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
A GL E+ GV + TYN AL+L KM DG SP T +++
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK-SPDEITMNMII 570
Query: 382 QMFLKA----------DMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
+ K D++ + WR PD+ YT +I GLC R RE
Sbjct: 571 LAYCKQGKAERAAQMLDLVSCGRRKWR--------PDVISYTNVIWGLC-RSNCREDGVI 621
Query: 432 FVE-MIEKGFLPQKVTFETLYRGLIQSDMLRT 462
+E MI G +P T+ L I D++R
Sbjct: 622 LLERMISAGIVPSIATWSVLINCFILDDIVRA 653
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 159/361 (44%), Gaps = 63/361 (17%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
F L++ LCK G+VK A E+ + + ++PDV Y +I G CKLG V+ A L++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI------------------------- 249
+ R PN VTYN L++ +C++ + R +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 250 RDADKVFDEMRERGIEPD-----------------------------------VTSFSIV 274
R A ++F+EMR +G EPD V +++ +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+ + +A+K + + + F M+ G+ TY ++I L R+EDA L D+M+ G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P TYN + D A + + M +G C P TYG L+ KA + V
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG-CEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL-PQKVTFETLYRG 453
++ R ++ G+ Y +I GL ++K EA F EM+E+ P V++ ++RG
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Query: 454 L 454
L
Sbjct: 656 L 656
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 162/361 (44%), Gaps = 35/361 (9%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV--SDTKTTSEHFTV 157
S+F++LI + + Q A ++ +M L P+ TF +++ + D
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
+++ C + V + V+++G+CK GRVE A +F+ EM +
Sbjct: 250 MVEFGCSWSNVSV---------------------NVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 218 -GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
G P+ T+N L+NG+C+ ++ A ++ D M + G +PDV +++ V+
Sbjct: 289 DGFFPDQYTFNTLVNGLCKA----------GHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
+ + + +++ M + P TY ++I L ++E+A L + G+ P
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
T+N + ++ A++LF++M+ G C P TY +L+ + +
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+ M+ SG + Y LI G C+ K REA + F EM G VT+ TL GL +
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 457 S 457
S
Sbjct: 518 S 518
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 169/405 (41%), Gaps = 78/405 (19%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL--VSDTKTTSEHF--- 155
+++ LI T+ K Q + A +L + + + P+ TF LI+ L + + E F
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 156 ------------TVLLDTLCKYGYVKLAAEVF-----NGNKRHCRFNPDVKMYTVLIYGW 198
+L+D+LC G + A + +G R V Y LI G+
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS------VITYNTLIDGF 480
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
CK + A+ +EM G+ N VTYN L++G+C+ R + DA ++ D+
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS----------RRVEDAAQLMDQ 530
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M G +PD +++ +L + R + + D + M G P + TY ++I L GR
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
+E A L + G++ YN + ++ A+ LF++M E P A +Y
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
+ ++R + G GP REA F VE++EK
Sbjct: 651 I----------------VFRGLCNGG-GP-----------------IREAVDFLVELLEK 676
Query: 439 GFLPQKVTFETLYRGLIQSDMLRTWRRL------KKKLDEESISF 477
GF+P+ + L GL+ M T +L K + EE +S
Sbjct: 677 GFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSM 721
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 177/405 (43%), Gaps = 37/405 (9%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLIT----EMDQRSLTPNPSTFLVLIRRLVSDT---- 148
+ S+F +LI++ A QF+L ++++ +D+ L P+ + ++ LV
Sbjct: 116 MGTSTFLILIESYA---QFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 149 -------------KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
K F VL+ LC+ ++ A + + PD K +T ++
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY-GLVPDEKTFTTVM 231
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
G+ + G ++ A +MVE G + V+ NV+++G C+ E + DA
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK----------EGRVEDALNF 281
Query: 256 FDEM-RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
EM + G PD +F+ +++ +A + +++ +M ++G P V TY SVI L
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G +++A + D+M+ SP VTYN + A +L + + G+ P
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL-PDV 400
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
T+ L+Q V E++ +M+ G PD Y +LI LC + K EA +
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 435 MIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGS 479
M G +T+ TL G +++ R + +++ +S S
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 172/411 (41%), Gaps = 35/411 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL LFN A PN + + ++ + + FD +++ +M STFL+LI
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 142 R---------RLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNK------RHCRFN- 185
++S + F + DT + Y ++ + +GN H + +
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDT---HFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 186 ----PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
PDV + VLI C+ ++ A L +M G+ P+ T+ ++ G
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE------ 236
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GIC 300
E + A ++ ++M E G S ++++H + + + + +L+ + M Q G
Sbjct: 237 ----EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
P T+ +++ L G ++ A + D M++ G P TYN + A+++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLC 420
+M CSP TY L+ K + + E+ R + G+ PD+ + LI GLC
Sbjct: 353 LDQMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 421 ERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 471
+ R A + F EM KG P + T+ L L L + K+++
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 4/193 (2%)
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
K+ P A Y ++ L G +D + + ++M S T+ + Y +
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
D L + M ++ P H Y +L + + + + +V+ M G+ PD+ + +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
LI LC + R A +M G +P + TF T+ +G I+ L R++ E+
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR----EQM 250
Query: 475 ISFGSEFQNYQLK 487
+ FG + N +
Sbjct: 251 VEFGCSWSNVSVN 263
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 183/402 (45%), Gaps = 51/402 (12%)
Query: 82 ALSLFNY-AKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
AL LF + +S P P + F L++ +AK+++FD+ L +
Sbjct: 56 ALDLFTHMVESRPLPSII--DFTKLLNVIAKMKKFDVVINLCDHLQ-------------- 99
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
I + D T + +L++ C+ LA+ F G F PD+ +T LI G+C
Sbjct: 100 IMGVSHDLYTCN----LLMNCFCQSSQPYLASS-FLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRK---------------VSLHPEERF 245
R+E A S +N+MVE GI+P+VV Y +++ +C+ + P+
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 246 ERTI----------RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
++ RDAD + M +R I+PDV +F+ ++ + + K + + + M
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
I P + TYTS+I G +++A +F M G P V Y + K D
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
A+K+F +M + GL T TY L+Q F + V +E++ M GV P++ Y +L
Sbjct: 335 DAMKIFYEMSQKGLTGNTI-TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 416 IHGLCERKKWREACQFFVEMIEK---GFLPQKVTFETLYRGL 454
+H LC K ++A F +M ++ G P T+ L GL
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 189/449 (42%), Gaps = 69/449 (15%)
Query: 85 LFNYAKSLPNPPLSHSSF--HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR 142
+ N L +SH + +LL++ + Q LA + +M + P+ TF LI
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150
Query: 143 RLVSDTKTTSEH-----------------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN 185
+ +T ++D+LCK G+V A +F+ + +
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY-GIR 209
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PDV MYT L+ G C GR A S L M +R I+P+V+T+N L++ +
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK---------- 259
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
E DA+++++EM I P++ +++ +++ + + F +M+ +G P V
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
YTS+I C +++DA +F EM + G++ +TY + + + A ++F M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE---SGVGPDLDLYTLLI------ 416
G+ P TY VLL + I+ DM++ GV P++ Y +L+
Sbjct: 380 SRGV-PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 417 -----------------------------HGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
G+C+ K + A F + KG P VT+
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 448 ETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
T+ GL + + L +K+ E+ +S
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 110/270 (40%), Gaps = 46/270 (17%)
Query: 207 AQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
A MVE P+++ + LLN + + ++F+ I + D ++ G+
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKM------KKFDVVI----NLCDHLQIMGVSH 105
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
D+ + +++++ + ++ +P L+ M + G P + T+TS+I R+E+A +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
++MV G+ P V Y D LC Y +
Sbjct: 166 NQMVEMGIKPDVVMYTTII---------------------DSLCKNGHVNYAL------- 197
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
++ M+ G+ PD+ +YT L++GLC +WR+A M ++ P +T
Sbjct: 198 --------SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
F L ++ L ++ SI+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 181/423 (42%), Gaps = 61/423 (14%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-----------------RRL 144
+ LI +++K + + A QL+ EM P+ TF +I R L
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 145 VSDTKTTSEHFTVLLDTLCKYGYVKLAAEVF---------------NGNKRHCRFN---- 185
+ + L++ LCK G V A ++F +G H R +
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 186 ------------PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV 233
PDV Y LIYG+ K G V A L++M +G +PNV +Y +L++G
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 234 CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM 293
C+ I +A V +EM G++P+ F+ ++ + + H+ +++ FR
Sbjct: 435 CKL----------GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
M +G P V T+ S+I L ++ A L +M+ GV VTYN + R +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 354 ADSALKLFKKMKEDGLCSPTAH-TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLY 412
A KL +M G SP TY L++ +A + + ++ M G P
Sbjct: 545 IKEARKLVNEMVFQG--SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
+LI+GLC EA +F EM+ +G P VTF +L GL ++ + + +KL
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 473 ESI 475
E I
Sbjct: 663 EGI 665
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 146/287 (50%), Gaps = 12/287 (4%)
Query: 164 KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNV 223
K G V LA EV + + R+ P+V YT+L+ G+CKLG+++ A + LNEM G++PN
Sbjct: 401 KEGLVGLALEVLH-DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 224 VTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
V +N L++ C+ E I +A ++F EM +G +PDV +F+ ++ +
Sbjct: 460 VGFNCLISAFCK----------EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
+ +L R M +G+ TY ++I G +++A L +EMV G +TYN
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 344 FFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
K + D A LF+KM DG +P+ + +L+ ++ M+ E ++M
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGH-APSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
G PD+ + LI+GLC + + F ++ +G P VTF TL
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 187/410 (45%), Gaps = 37/410 (9%)
Query: 80 KIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV 139
K+A ++F S PP + +F +++ V + D A L+ +M + PN +
Sbjct: 199 KVAANVFYDMLSRKIPP-TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQT 257
Query: 140 LIRRLVSDTKTT-----------------SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHC 182
LI L + +E F ++ LCK+ + AA++ N +
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN--RMLI 315
Query: 183 R-FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
R F PD Y L+ G CK+GRV+ A+ ++ R +P +V +N L++G L
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVIFNTLIHGFVTHGRLD- 370
Query: 242 EERFERTIRDADKVFDEM-RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
DA V +M GI PDV +++ +++ Y + L+L+ M+ +G
Sbjct: 371 ---------DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
P V +YT ++ G++++A + +EM G+ P V +NC + A+++
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLC 420
F++M G C P +T+ L+ + D I + RDM GV + Y LI+
Sbjct: 482 FREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 421 ERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
R + +EA + EM+ +G ++T+ +L +GL ++ + R L +K+
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 170/392 (43%), Gaps = 35/392 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S++++++ + +A + +M R + P TF V+++ + + S LL
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA--LSLLR 241
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+ K+G V P+ +Y LI+ K RV A L EM G
Sbjct: 242 DMTKHGCV-----------------PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+ T+N ++ G+C+ F+R I +A K+ + M RG PD ++ +++ +
Sbjct: 285 PDAETFNDVILGLCK---------FDR-INEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS-GVSPCAV 339
+ + D F + + P + + ++I + GRL+DA+ + +MV S G+ P
Sbjct: 335 IGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
TYN Y AL++ M+ G C P ++Y +L+ F K I + +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKG-CKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
M G+ P+ + LI C+ + EA + F EM KG P TF +L GL + D
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 460 LRTWRRLKKKLDEESISFGSEFQNYQLKPYRR 491
++ L + + E + + N + + R
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 30/264 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF----------------LVLIRRL 144
F+ LI K + A ++ EM ++ P+ TF L L+R +
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 145 VSD-TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNP-DVKMYTVLIYGWCKLG 202
+S+ + + L++ + G +K A ++ N + + +P D Y LI G C+ G
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVN--EMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
V+ A+S +M+ G P+ ++ N+L+NG+CR + F++ EM R
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK----------EMVLR 628
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G PD+ +F+ +++ RA + + L FR ++ +GI P T+ +++ L G + DA
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFK 346
L DE + G P T++ +
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 34/298 (11%)
Query: 168 VKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYN 227
V + E+F+ + +Y VLI G +T L +M + GI
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI-------- 142
Query: 228 VLLNGVCRKVSLHPEERFERTIRDADK---------VFDEMRE-RGIEPDVTSFSIVLHV 277
+ E F +RD DK + EMR EP S+++VL +
Sbjct: 143 -----------VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
+ +++ + F M + I PT+ T+ V+K + ++ A L +M + G P
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
+V Y + AL+L ++M G C P A T+ ++ K D I ++
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
M G PD Y L++GLC+ + A F + + P+ V F TL G +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFV 364
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 181/383 (47%), Gaps = 29/383 (7%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDT---------------- 148
+++ M K Q LA +L+ +M++R++ + + ++I L D
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 149 -KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
K + L+ C G A++ + + +P+V ++VLI + K G++ A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREA 352
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
L EM++RGI PN +TYN L++G C+ E R E I ++ D M +G +PD
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCK------ENRLEEAI----QMVDLMISKGCDPD 402
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
+ +F+I+++ Y +A++ L+ FR M +G+ TY ++++ G+LE A+ LF
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
EMV V P V+Y + + AL++F K+++ + Y +++ A
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM-ELDIGIYMIIIHGMCNA 521
Query: 388 DMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
+ +++ + GV D Y ++I LC + +A F +M E+G P ++T+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 448 ETLYRGLIQSDMLRTWRRLKKKL 470
L R + D T L +++
Sbjct: 582 NILIRAHLGDDDATTAAELIEEM 604
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 171/378 (45%), Gaps = 33/378 (8%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF + +S P P + F+ L +AK +Q++L L +M+ + + + T ++
Sbjct: 72 AVDLFRDMIQSRPLPTVID--FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
I K + T + + K GY PD ++ L+ G C
Sbjct: 130 INCFCRCRKLSYAFST--MGKIMKLGY-----------------EPDTVIFNTLLNGLCL 170
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
RV A ++ MVE G +P ++T N L+NG+C + DA + D M
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC----------LNGKVSDAVVLIDRMV 220
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
E G +P+ ++ VL+V ++ + L+++ R M+E+ I Y+ +I L G L+
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
+A LF+EM G +TYN + D KL + M + + SP T+ VL
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI-SPNVVTFSVL 339
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ F+K + ++ ++M + G+ P+ Y LI G C+ + EA Q MI KG
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 441 LPQKVTFETLYRGLIQSD 458
P +TF L G +++
Sbjct: 400 DPDIMTFNILINGYCKAN 417
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 32/320 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+F +LID+ K + A QL+ EM QR + PN T+ L+D
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY------------------NSLID 376
Query: 161 TLCKYGYVKLAAEVFN-GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
CK ++ A ++ + + C +PD+ + +LI G+CK R++ EM RG+
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGC--DPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
N VTYN L+ G C+ L A K+F EM R + PD+ S+ I+L
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEV----------AKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ + +L+ F +++ + + Y +I + + +++DA LF + GV A
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
YN E + A LF+KM E+G +P TY +L++ L D E+ +
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGH-APDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 400 MKESGVGPDLDLYTLLIHGL 419
MK SG D+ ++I+ L
Sbjct: 604 MKSSGFPADVSTVKMVINML 623
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 11/291 (3%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P V + L K + E + +M +GI ++ T ++++N CR
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC--------- 136
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
R + A ++ + G EPD F+ +L+ + +L+ M E G PT+ T
Sbjct: 137 -RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLIT 195
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
+++ L G++ DA L D MV +G P VTY A++L +KM+
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
E + A Y +++ K + ++ +M+ G D+ Y LI G C +W
Sbjct: 256 ERNI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
+ + +MI++ P VTF L ++ LR +L K++ + I+
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 16/280 (5%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+ + A +M++ P V+ +N L + + + +++E + + +M +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKT------KQYELVL----ALCKQMESK 117
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI + + SI+++ + R K + + + G P + +++ L R+ +A
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D MV G P +T N A+ L +M E G P TYG +L
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF-QPNEVTYGPVLN 236
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
+ K+ + E+ R M+E + D Y+++I GLC+ A F EM KGF
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 443 QKVTFETLYRGLIQS----DMLRTWR-RLKKKLDEESISF 477
+T+ TL G + D + R +K+K+ ++F
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE------- 153
+F++LI+ K + D +L EM R + N T+ L++ K
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 154 ----------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ +LLD LC G ++ A E+F G + D+ +Y ++I+G C +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIF-GKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
V+ A + +G++ + YN++++ +CRK SL AD +F +M E G
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK----------ADILFRKMTEEG 573
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
PD +++I++ + + + MK G V+T VI L+S
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 189/425 (44%), Gaps = 35/425 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
L LFN K P S +++LID + K ++ + A QL EM R L P+ T+ LI
Sbjct: 198 GLELFNRMKHDRIYP-SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 142 ----------------RRLVSD-TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
R+ +D + + F LL L K G V+ A V + F
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK-EMKDLGF 315
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER 244
PD +++L G+ + E A V+ G++ N T ++LLN +C+
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK--------- 366
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
E I A+++ +G+ P+ ++ ++ Y R + K M++QG+ P
Sbjct: 367 -EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
Y +I+ G +E+AE ++M GVSP TYN Y + + D + K+M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
+++G P +YG L+ K + + + RDM++ GV P + +Y +LI G C + K
Sbjct: 486 EDNG-TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESISFGS 479
+A +F EM++KG VT+ TL GL + L L +K L + ++ S
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 480 EFQNY 484
Y
Sbjct: 605 LISGY 609
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 168/367 (45%), Gaps = 39/367 (10%)
Query: 98 SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTV 157
S ++++LI + +FD + ++ EM+ PN ++ LI
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI---------------- 501
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
+ LCK G L A++ + +P V++Y +LI G C G++E A F EM+++
Sbjct: 502 --NCLCK-GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHV 277
GIE N+VTYN L++G+ L +A+ + E+ +G++PDV +++ ++
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLS----------EAEDLLLEISRKGLKPDVFTYNSLISG 608
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
Y A Q + + MK GI PT+ TY +I G +E E LF EM + P
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPD 664
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
+ YN Y D + A L K+M E + TY L+ LK + V+ +
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI-GLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+M + P+ D Y +++ G CE K + A ++ EM EKGFL L GL +
Sbjct: 724 DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEE 783
Query: 458 DMLRTWR 464
WR
Sbjct: 784 -----WR 785
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 174/405 (42%), Gaps = 33/405 (8%)
Query: 89 AKSLPNPPLSHSSFHLLIDTM-AKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD 147
A SL +P L H +LL+ + + + A L + + P
Sbjct: 98 AFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYP--------------- 142
Query: 148 TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
+S+ T+LLD L K ++ VF N F P MY I KL V
Sbjct: 143 ---SSDSLTLLLDHLVKTKQFRVTINVFL-NILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
N M I P+V YNVL++G+C+ + + DA+++FDEM R + P
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKG----------KRMNDAEQLFDEMLARRLLPS 248
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
+ +++ ++ Y +A P+ S MK I P++ T+ +++K L G +EDAE +
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
EM G P A T++ F Y + A++AL +++ + G+ A+T +LL K
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV-KMNAYTCSILLNALCKE 367
Query: 388 DMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK-GFLPQKVT 446
I +EI G+ P+ +Y +I G C RK + +E +EK G P +
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC-RKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYRR 491
+ L R + + + K+ + +S E N + Y R
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 185/460 (40%), Gaps = 107/460 (23%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE------- 153
+F+ L+ + K + A ++ EM P+ TF +L S+ K +
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 154 ----------HFTVLLDTLCKYGYVKLAAEVFNGN----------------KRHCR---- 183
++LL+ LCK G ++ A E+ +CR
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 184 --------------FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVL 229
PD Y LI +C+LG +E A+ +N+M +G+ P+V TYN+L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 230 LNGVCRKVSLHPEERFERTIRDADKVFD---EMRERGIEPDVTSFSIVLHVYSRAHK--- 283
+ G RK DK FD EM + G P+V S+ +++ + K
Sbjct: 466 IGGYGRKYEF-------------DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 284 --------------PQLSL---------------DKFRMMKE---QGICPTVATYTSVIK 311
P++ + D FR KE +GI + TY ++I
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
L+ G+L +AE L E+ R G+ P TYN Y + + L+++MK G+
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI-K 631
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
PT TY +L+ + K + I + + ++ +M + PDL +Y ++H +A
Sbjct: 632 PTLKTYHLLISLCTK-EGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 432 FVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 471
+MIEK K T+ +L G ++ L R L +++
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMN 727
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 9/290 (3%)
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ P+V + V+I CK G++ A+ + +M G PNVV+YN L++G C+ L
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK---LGGN 274
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
+ + AD V EM E + P++T+F+I++ + + S+ F+ M +Q + P
Sbjct: 275 GKMYK----ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
V +Y S+I L + G++ +A + D+MV +GV P +TYN + AL +F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+K G PT Y +L+ + K I + +M+ G+ PD+ Y LI GLC
Sbjct: 391 SVKGQG-AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
A + F ++ KG LP VTF L G + R L K++ +
Sbjct: 450 GNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 170/354 (48%), Gaps = 35/354 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQ---LITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTV 157
S++ LID K+ ++ ++ EM + ++PN +TF +LI D
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP------ 313
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
G +K+ E+ + + + P+V Y LI G C G++ A S ++MV
Sbjct: 314 --------GSMKVFKEMLDQDVK-----PNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHV 277
G++PN++TYN L+NG C+ +++A +F ++ +G P +++++
Sbjct: 361 GVQPNLITYNALINGFCK----------NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
Y + K M+ +GI P V TY +I L G +E A+ LFD++ G+ P
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PD 469
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
VT++ + Y + ++ A L K+M + GL P TY ++++ + K + +
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGL-KPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 398 RDM-KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
M KE + ++ Y +L+ G ++ K +A EM+EKG +P ++T+E +
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 173/373 (46%), Gaps = 35/373 (9%)
Query: 104 LLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLC 163
L+I + + R D+ + + EM +R + PN TF V+++ LC
Sbjct: 194 LMIALLKENRSADVEY-VYKEMIRRKIQPNVFTF------------------NVVINALC 234
Query: 164 KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG---RVETAQSFLNEMVERGIE 220
K G + A +V K + +P+V Y LI G+CKLG ++ A + L EMVE +
Sbjct: 235 KTGKMNKARDVMEDMKVY-GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS 293
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+ T+N+L++G + + + + KVF EM ++ ++P+V S++ +++
Sbjct: 294 PNLTTFNILIDGFWK----------DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
K ++ M G+ P + TY ++I L++A +F + G P
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN Y D L ++M+ +G+ P TY L+ + I K+++ +
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIV-PDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
G+ PDL + +L+ G C + + R+A EM + G P+ +T+ + +G + L
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 461 RTWRRLKKKLDEE 473
+ ++ ++++E
Sbjct: 522 KAATNMRTQMEKE 534
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 39/303 (12%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE------ 153
++F++LID K + ++ EM + + PN ++ LI L + K +
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 154 -----------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
+ L++ CK +K A ++F K P +MY +LI +CKLG
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRMYNMLIDAYCKLG 415
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ + EM GI P+V TYN L+ G+CR I A K+FD++ +
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR----------NGNIEAAKKLFDQLTSK 465
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G+ PD+ +F I++ Y R + + + + M + G+ P TY V+K G L+ A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 323 EGLFDEM-----VRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+ +M +R V+ +YN + Y + + A L +M E GL P TY
Sbjct: 525 TNMRTQMEKERRLRMNVA----SYNVLLQGYSQKGKLEDANMLLNEMLEKGLV-PNRITY 579
Query: 378 GVL 380
++
Sbjct: 580 EIV 582
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 33/255 (12%)
Query: 80 KIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV 139
K AL +F K P + +++LID K+ + D + L EM++ + P+ T+
Sbjct: 383 KEALDMFGSVKGQGAVPTTRM-YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY-- 439
Query: 140 LIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
L+ LC+ G ++ A ++F+ + + PD+ + +L+ G+C
Sbjct: 440 ----------------NCLIAGLCRNGNIEAAKKLFD--QLTSKGLPDLVTFHILMEGYC 481
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
+ G A L EM + G++P +TYN+++ G C+ E ++ A + +M
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK----------EGNLKAATNMRTQM 531
Query: 260 -RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
+ER + +V S++++L YS+ K + + M E+G+ P TY V + + G
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Query: 319 LEDAEG-LFDEMVRS 332
+ D EG LF+ +S
Sbjct: 592 VPDIEGHLFNVSTKS 606
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 39/227 (17%)
Query: 273 IVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
+++ Y+ + +L + F+ G + + ++ L R D E ++ EM+R
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR 217
Query: 333 -----------------------------------GVSPCAVTYNCFFKEY---RGRKDA 354
G SP V+YN Y G
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
A + K+M E+ + SP T+ +L+ F K D + +++++M + V P++ Y
Sbjct: 278 YKADAVLKEMVENDV-SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLR 461
LI+GLC K EA +M+ G P +T+ L G ++DML+
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 157/332 (47%), Gaps = 24/332 (7%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ V++ CK G + A V + +PDV Y ++ C G+++ A L+ M
Sbjct: 175 YNVMISGYCKAGEINNALSVLD----RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
++R P+V+TY +L+ CR + + A K+ DEMR+RG PDV +++++
Sbjct: 231 LQRDCYPDVITYTILIEATCR----------DSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
++ + + ++ M G P V T+ +++ + S GR DAE L +M+R G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
SP VT+N + A+ + +KM + G C P + +Y LL F K +
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG-CQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
E M G PD+ Y ++ LC+ K +A + ++ KG P +T+ T+ GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 455 IQSDMLRTWRRLK-------KKLDEESISFGS 479
++ +T + +K K L ++I++ S
Sbjct: 460 AKAG--KTGKAIKLLDEMRAKDLKPDTITYSS 489
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 171/377 (45%), Gaps = 38/377 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
+++++I K + + A + +D+ S++P+ T+ ++R L K
Sbjct: 174 TYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNK-RHCRFNPDVKMYTVLIYGWCKLG 202
+T+L++ C+ V A ++ + + R C PDV Y VL+ G CK G
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC--TPDVVTYNVLVNGICKEG 288
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR--DADKVFDEMR 260
R++ A FLN+M G +PNV+T+N++L +C T R DA+K+ +M
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS------------TGRWMDAEKLLADML 336
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+G P V +F+I+++ R ++D M + G P +Y ++ +++
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
A + MV G P VTYN + A+++ ++ G CSP TY +
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTV 455
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ KA G ++ +M+ + PD Y+ L+ GL K EA +FF E G
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 441 LPQKVTFETLYRGLIQS 457
P VTF ++ GL +S
Sbjct: 516 RPNAVTFNSIMLGLCKS 532
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 150/333 (45%), Gaps = 29/333 (8%)
Query: 166 GYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVT 225
G+ L V++GN PD+ T LI G+C+LG+ A L + G P+V+T
Sbjct: 121 GFKFLENMVYHGNV------PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 226 YNVLLNGVCR------------KVSLHPEERFERTI----------RDADKVFDEMRERG 263
YNV+++G C+ ++S+ P+ TI + A +V D M +R
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
PDV +++I++ R ++ M+++G P V TY ++ + GRL++A
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
++M SG P +T+N + A KL M G SP+ T+ +L+
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF-SPSVVTFNILINF 353
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+ ++G +I M + G P+ Y L+HG C+ KK A ++ M+ +G P
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 444 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
VT+ T+ L + + + +L + S
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 158/372 (42%), Gaps = 53/372 (14%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +LI+ + A +L+ EM R TP+ T+ VL++
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY------------------NVLVN 282
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+CK G + A + N + P+V + +++ C GR A+ L +M+ +G
Sbjct: 283 GICKEGRLDEAIKFLN-DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 221 PNVVTYNVLLNGVCRK----------------------VSLHP-------EERFERTIRD 251
P+VVT+N+L+N +CRK +S +P E++ +R I
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI-- 399
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
+ + M RG PD+ +++ +L + K + +++ + +G P + TY +VI
Sbjct: 400 --EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
LA G+ A L DEM + P +TY+ D A+K F + + G+
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI-R 516
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P A T+ ++ K+ + M G P+ YT+LI GL +EA +
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 432 FVEMIEKGFLPQ 443
E+ KG + +
Sbjct: 577 LNELCNKGLMKK 588
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 18/289 (6%)
Query: 176 NGNKRHCRFNPDVKMYTVL----IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLN 231
NGN + N + V + + G +E FL MV G P+++ L+
Sbjct: 86 NGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIR 145
Query: 232 GVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF 291
G C R +T R A K+ + + G PDV ++++++ Y +A + +L
Sbjct: 146 GFC---------RLGKT-RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 292 RMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGR 351
M + P V TY ++++ L G+L+ A + D M++ P +TY +
Sbjct: 196 DRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 352 KDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDL 411
A+KL +M++ G C+P TY VL+ K + + DM SG P++
Sbjct: 253 SGVGHAMKLLDEMRDRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 412 YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
+ +++ +C +W +A + +M+ KGF P VTF L L + +L
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 175/374 (46%), Gaps = 30/374 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ ++++ + K DLA+ L+ +M+ + N V+I ++ ++D
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN-----VVI-------------YSTVID 268
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+LCKY + A +F + P+V Y+ LI C R A L++M+ER I
Sbjct: 269 SLCKYRHEDDALNLFT-EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNVVT+N L++ + E + +A+K++DEM +R I+PD+ ++S +++ +
Sbjct: 328 PNVVTFNALIDAFVK----------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + F +M + P V TY ++I R+++ LF EM + G+ VT
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y + +D D+A +FK+M DG+ P TY LL K + ++ +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
+ S + P + Y ++I G+C+ K + F + KG P + + T+ G + +
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 461 RTWRRLKKKLDEES 474
L +K+ E+
Sbjct: 557 EEADALFRKMREDG 570
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 179/395 (45%), Gaps = 33/395 (8%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF KS P P + F+ L+ +AK+++FDL L +M + ++ N T+
Sbjct: 69 AIGLFGGMVKSRPLPSIFE--FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY--- 123
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
+L++ C+ + LA + G + P + + L+ G+C
Sbjct: 124 ---------------NILINCFCRRSQISLALALL-GKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
R+ A + +++MVE G P+ +T+ L++G+ LH + +A + D M
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGL----FLHNKAS------EAVALVDRMV 217
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+RG +P++ ++ +V++ + L+ + M+ I V Y++VI L +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
DA LF EM GV P +TY+ + A +L M E + +P T+ L
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI-NPNVVTFNAL 336
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ F+K + ++++ +M + + PD+ Y+ LI+G C + EA F MI K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
P VT+ TL G ++ + L +++ + +
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 29/324 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR------------RLVSD-- 147
+ +ID++ K R D A L TEM+ + + PN T+ LI RL+SD
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 148 ---TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
F L+D K G + A ++++ + +PD+ Y+ LI G+C R+
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 381
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
+ A+ M+ + PNVVTYN L+NG C+ + I + ++F EM +RG+
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKA----------KRIDEGVELFREMSQRGL 431
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
+ +++ ++H + +A + F+ M G+ P + TY +++ L G+LE A
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
+F+ + RS + P TYN + + LF + G+ P Y ++ F
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV-KPDVIIYNTMISGF 550
Query: 385 LKADMIGVVKEIWRDMKESGVGPD 408
+ + ++R M+E G PD
Sbjct: 551 CRKGLKEEADALFRKMREDGPLPD 574
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 11/274 (4%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ A MV+ P++ +N LL+ + + ++F+ I +K M+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM------KKFDLVISLGEK----MQRL 114
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI ++ +++I+++ + R + L+L M + G P++ T +S++ R+ DA
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D+MV G P +T+ A A+ L +M + G C P TYGV++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVN 233
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K I + + M+ + + ++ +Y+ +I LC+ + +A F EM KG P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
+T+ +L L + RL + E I+
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 28/253 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL-VSDTKTTSEH----- 154
+F+ LID K + A +L EM +RS+ P+ T+ LI + D ++H
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ L++ CK + E+F + V YT LI+G+ +
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT-YTTLIHGFFQARD 450
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ AQ +MV G+ PN++TYN LL+G+C+ L A VF+ ++
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK----------AMVVFEYLQRSK 500
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+EP + +++I++ +A K + D F + +G+ P V Y ++I G E+A+
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 324 GLFDEMVRSGVSP 336
LF +M G P
Sbjct: 561 ALFRKMREDGPLP 573
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 28/184 (15%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----------------RRL 144
+++ LI+ K ++ D +L EM QR L N T+ LI +++
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 145 VSD-TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
VSD + LLD LCK G ++ A VF +R + P + Y ++I G CK G+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGK 520
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
VE + +G++P+V+ YN +++G CRK L E AD +F +MRE G
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK-GLKEE---------ADALFRKMREDG 570
Query: 264 IEPD 267
PD
Sbjct: 571 PLPD 574
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 29/370 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
++ LI+ + + ++L+ EM +R++ +P T+ +++ + S +
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+T L+ T + A V K PD+ Y LI G K R
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKR 502
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
++ A+SFL EMVE G++PN TY ++G ADK EMRE G
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS----------ADKYVKEMRECG 552
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+ P+ + +++ Y + K + +R M +QGI TYT ++ L +++DAE
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
+F EM G++P +Y + + A +F +M E+GL +P Y +LL
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL-TPNVIIYNMLLGG 671
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
F ++ I KE+ +M G+ P+ Y +I G C+ EA + F EM KG +P
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 444 KVTFETLYRG 453
+ TL G
Sbjct: 732 SFVYTTLVDG 741
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 187/431 (43%), Gaps = 66/431 (15%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV----SDTKTT 151
PL ++ + +LID + K+++ + A L+ EMD ++ + T+ +LI L+ +D
Sbjct: 275 PLKYT-YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 152 SEH-------------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
H + + + K G ++ A +F+G P + Y LI G+
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI-PQAQAYASLIEGY 392
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
C+ V L EM +R I + TY ++ G+C L A + E
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG----------AYNIVKE 442
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M G P+V ++ ++ + + + ++ + MKEQGI P + Y S+I L+ R
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL--------- 369
+++A EMV +G+ P A TY F Y + SA K K+M+E G+
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 370 --------------CSP-----------TAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
CS A TY VL+ K D + +EI+R+M+ G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
+ PD+ Y +LI+G + ++A F EM+E+G P + + L G +S + +
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 465 RLKKKLDEESI 475
L LDE S+
Sbjct: 683 EL---LDEMSV 690
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 141/322 (43%), Gaps = 25/322 (7%)
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
++ D KT +TVL++ L K V A E+F R PDV Y VLI G+ KLG
Sbjct: 588 ILGDAKT----YTVLMNGLFKNDKVDDAEEIFR-EMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
++ A S +EMVE G+ PNV+ YN+LL G CR I A ++ DEM +G
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS----------GEIEKAKELLDEMSVKG 692
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+ P+ ++ ++ Y ++ + F MK +G+ P YT+++ C RL D E
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD---GCCRLNDVE 749
Query: 324 ------GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
G + S +P N FK + + L D P TY
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFK-FGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
+++ K + KE++ M+ + + P + YT L++G + + E F E I
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 438 KGFLPQKVTFETLYRGLIQSDM 459
G P + + + ++ M
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGM 890
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 163/398 (40%), Gaps = 51/398 (12%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
P LS +L+D + + + DL W + M +R++ V D KT
Sbjct: 184 PRLSRC--KVLLDALLRWNRLDLFWDVYKGMVERNV--------------VFDVKT---- 223
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCR---FNPDVKM-----------------YTVL 194
+ +L+ C+ G V+L +V ++ R N D + Y VL
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I G CK+ R+E A+S L EM G+ + TY++L++G+ + R A
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG----------RNADAAKG 333
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
+ EM GI + + V S+ + + F M G+ P Y S+I+
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
+ L EM + + TY K D D A + K+M G C P
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNV 452
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
Y L++ FL+ G + ++MKE G+ PD+ Y LI GL + K+ EA F VE
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 435 MIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
M+E G P T+ G I++ + + K++ E
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 146/361 (40%), Gaps = 57/361 (15%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+ +LI+ +K+ A + EM + LTPN V+I + +LL
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN-----VII-------------YNMLLG 670
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C+ G ++ A E+ + +P+ Y +I G+CK G + A +EM +G+
Sbjct: 671 GFCRSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 221 PNVVTYNVLLNGVCRKVSLHPEER----------------------------FERT---I 249
P+ Y L++G CR L+ ER F +T
Sbjct: 730 PDSFVYTTLVDGCCR---LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 250 RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSV 309
+++ D +R +P+ +++I++ + + + + F M+ + PTV TYTS+
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 310 IKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY----NCFFKEYRGRKDADSALKLFKKMK 365
+ GR + +FDE + +G+ P + Y N F KE K ++F K
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
D C + T LL F K + V +++ +M PD LI+ C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966
Query: 426 R 426
R
Sbjct: 967 R 967
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 33/370 (8%)
Query: 97 LSHS--SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
+SH SF +LI + + A ++ +M + P+ TF L+ +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
V+L + K GY P+V +Y LI G CK G + A LNEM
Sbjct: 162 SLVIL--MVKSGY-----------------EPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
++G+ +VVTYN LL G+C + DA ++ +M +R I PDV +F+ +
Sbjct: 203 EKKGLGADVVTYNTLLTGLC----------YSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+ V+ + + + ++ M + + P TY S+I L GRL DA+ FD M G
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P VTYN + + D +KLF++M +G + TY L+ + + + V
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF-NADIFTYNTLIHGYCQVGKLRVAL 371
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+I+ M V PD+ + +L+HGLC + A F +M E V + + GL
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 455 IQSDML-RTW 463
++D + + W
Sbjct: 432 CKADKVEKAW 441
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 38/346 (10%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ LID + K + ++A +L+ EM+++ L + T+ LL
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY------------------NTLLTG 220
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
LC G AA + + NPDV +T LI + K G ++ AQ EM++ ++P
Sbjct: 221 LCYSGRWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
N VTYN ++NG+C L+ DA K FD M +G P+V +++ ++ + +
Sbjct: 280 NNVTYNSIINGLCMHGRLY----------DAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ F+ M +G + TY ++I G+L A +F MV V+P +T+
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 342 NCFFKEYRGRKDADSALKLFKKMKED----GLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
+ +SAL F M+E G+ + Y +++ KAD + E++
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVA-----YNIMIHGLCKADKVEKAWELF 444
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+ GV PD YT++I GLC+ REA + M E+G + Q
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQ 490
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 15/293 (5%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P + +T L+ L R ET F +M GI ++ ++ +L++ CR L
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSF---- 124
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
A V +M + G EP + +F +LH + ++ + +M + G P V
Sbjct: 125 ------ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE--YRGRKDADSALKLFKK 363
Y ++I L G L A L +EM + G+ VTYN Y GR +D+A L
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW-SDAARMLRDM 237
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
MK +P T+ L+ +F+K + +E++++M +S V P+ Y +I+GLC
Sbjct: 238 MKRS--INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
+ +A + F M KG P VT+ TL G + M+ +L +++ E +
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 82/264 (31%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
S A L + K NP + +F LID K D A +L EM Q S+ PN T+
Sbjct: 228 SDAARMLRDMMKRSINPDVV--TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 139 VLIRRL-----VSDTKTTSE------------HFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
+I L + D K T + + L+ CK+ V ++F +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ--RMS 343
Query: 182 CR-FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVT--------------- 225
C FN D+ Y LI+G+C++G++ A MV R + P+++T
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 226 --------------------YNVLLNGVCR--KV-------------SLHPEERFERTI- 249
YN++++G+C+ KV + P+ R +
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 250 ---------RDADKVFDEMRERGI 264
R+AD++ M+E GI
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGI 487
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 185/425 (43%), Gaps = 65/425 (15%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF +S P P L F L +A+ +Q+DL L +M+ + + N T ++
Sbjct: 56 AVDLFQEMTRSRPRPRLI--DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 141 I------RRLV---------------SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFN--- 176
I R+L DT T F+ L++ LC G V A E+ +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVT----FSTLINGLCLEGRVSEALELVDRMV 169
Query: 177 --GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC 234
G+K P + L+ G C G+V A ++ MVE G +PN VTY +L +C
Sbjct: 170 EMGHK------PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 235 -----------------RKVSLHPEERF--------ERTIRDADKVFDEMRERGIEPDVT 269
RK+ L + + ++ +A +F+EM +G + D+
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 270 SFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
++ ++ + A + R M ++ I P V ++++I C G+L +AE L EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 330 VRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADM 389
++ G+SP VTY + D A + M G C P T+ +L+ + KA++
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG-CGPNIRTFNILINGYCKANL 402
Query: 390 IGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
I E++R M GV D Y LI G CE K A + F EM+ + P V+++
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 450 LYRGL 454
L GL
Sbjct: 463 LLDGL 467
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 171/370 (46%), Gaps = 29/370 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
++ ++ M K Q LA +L+ +M++R + + + ++I L D +
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+T L+ C G A++ + + PDV ++ LI + K G+
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGK 332
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A+ EM++RGI P+ VTY L++G C+ E + A+ + D M +G
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCK----------ENQLDKANHMLDLMVSKG 382
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
P++ +F+I+++ Y +A+ L+ FR M +G+ TY ++I+ G+LE A+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
LF EMV V P V+Y + + AL++F+K+++ + Y +++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM-ELDIGIYNIIIHG 501
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
A + +++ + GV PD+ Y ++I GLC++ EA F +M E G P
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 444 KVTFETLYRG 453
T+ L R
Sbjct: 562 GCTYNILIRA 571
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 31/302 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
+F LID K + A +L EM QR ++P+ T+ LI + + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCR-FNPDVKMYTVLIYGWCKLG 202
F +L++ CK + E+F K R D Y LI G+C+LG
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFR--KMSLRGVVADTVTYNTLIQGFCELG 436
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
++E A+ EMV R + P++V+Y +LL+G+C + PE+ E +F+++ +
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD--NGEPEKALE--------IFEKIEKS 486
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
+E D+ ++I++H A K + D F + +G+ P V TY +I L G L +A
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+ LF +M G SP TYN + + G DA + KL +++K G S A T +++
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF-SVDASTVKMVVD 605
Query: 383 MF 384
M
Sbjct: 606 ML 607
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 15/266 (5%)
Query: 213 EMVERGIEPNVVTYNVLLNGVCR--KVSLHPEERFERTIRDADKVFDEMRERGIEPDVTS 270
+M +GI N+ T ++++N CR K+SL A ++ + G EPD +
Sbjct: 97 QMELKGIAHNLYTLSIMINCCCRCRKLSL------------AFSAMGKIIKLGYEPDTVT 144
Query: 271 FSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMV 330
FS +++ + +L+ M E G PT+ T +++ L G++ DA L D MV
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 331 RSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMI 390
+G P VTY K A++L +KM+E + A Y +++ K +
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI-KLDAVKYSIIIDGLCKDGSL 263
Query: 391 GVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
++ +M+ G D+ +YT LI G C +W + + +MI++ P V F L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 451 YRGLIQSDMLRTWRRLKKKLDEESIS 476
++ LR L K++ + IS
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 41/269 (15%)
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
DA +F EM P + FS + V +R + L LD + M+ +GI + T + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 311 KCLASC-----------------------------------GRLEDAEGLFDEMVRSGVS 335
C C GR+ +A L D MV G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
P +T N A+ L +M E G P TYG +L++ K+ + E
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAME 233
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
+ R M+E + D Y+++I GLC+ A F EM KGF + + TL RG
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 456 QS----DMLRTWRRL-KKKLDEESISFGS 479
+ D + R + K+K+ + ++F +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
+DA LF EM RS P + ++ F K D L L K+M+ G+ + +T +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI-AHNLYTLSI 112
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
++ + + + + + G PD ++ LI+GLC + EA + M+E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 440 FLPQKVTFETLYRGL 454
P +T L GL
Sbjct: 173 HKPTLITLNALVNGL 187
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 180/414 (43%), Gaps = 50/414 (12%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
++ S F + SLP+ S S +I + K + F A QL+ ++ QR L +P L
Sbjct: 62 LSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSL 121
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
+ + D + S F+ L+ K G + + VF R C P ++ TVL+ K
Sbjct: 122 VGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFE-QIRSCGLKPHLQACTVLLNSLVK 180
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
+T +MV+ G+ N+ YNVL++ C K S PE+ A+K+ EM
Sbjct: 181 QRLTDTVWKIFKKMVKLGVVANIHVYNVLVHA-CSK-SGDPEK--------AEKLLSEME 230
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
E+G+ PD+ +++ ++ VY + +L M+ G+ P + TY S I + GR+
Sbjct: 231 EKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMR 290
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
+A LF E ++ V+ VTY Y D D AL+L + M+ G SP TY +
Sbjct: 291 EATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGF-SPGVVTYNSI 348
Query: 381 LQMFLK------------------------------------ADMIGVVKEIWRDMKESG 404
L+ + DM+ VK + + M ESG
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK-VKKKMIESG 407
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
+ D+ Y LIHG C+ + A + MIEKGF P T+ L G +
Sbjct: 408 LKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 167/382 (43%), Gaps = 39/382 (10%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVL--L 159
+++L+ +K + A +L++EM+++ + P+ T+ L+S S HF L
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY----NTLISVYCKKSMHFEALSVQ 261
Query: 160 DTLCKYGY---VKLAAEVFNGNKRHCRFNPDVKM--------------YTVLIYGWCKLG 202
D + + G + +G R R ++ YT LI G+C++
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMN 321
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
++ A M RG P VVTYN +L +C + IR+A+++ EM +
Sbjct: 322 DIDEALRLREVMESRGFSPGVVTYNSILRKLCE----------DGRIREANRLLTEMSGK 371
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
IEPD + + +++ Y + ++ + M E G+ + +Y ++I LE+A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+ M+ G SP TY+ + + D KL ++ ++ GLC+ A Y L++
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA-LYRGLIR 490
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K + + K ++ M++ G+ D ++T + + K EA F M + +
Sbjct: 491 RICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMV 550
Query: 443 QKVTFETL---YRGLIQSDMLR 461
++++ Y G +D+LR
Sbjct: 551 NLKLYKSISASYAG--DNDVLR 570
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 48/403 (11%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
AL+LF + A+S P P + F L+ +AK+ +++ L ++ ++ + +F
Sbjct: 63 ALTLFCDMAESHPLPSIV--DFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSF--- 117
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
T L+D C+ + LA G F P + + L+ G+C
Sbjct: 118 ---------------TTLIDCFCRCARLSLALSCL-GKMMKLGFEPSIVTFGSLVNGFCH 161
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC---------------RKVSLHPEERF 245
+ R A S ++++V G EPNVV YN +++ +C +K+ + P+
Sbjct: 162 VNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVT 221
Query: 246 ERTIRD----------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
++ + ++ +M GI PDV +FS ++ VY + + + ++ M
Sbjct: 222 YNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMI 281
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
++ + P + TY S+I L G L++A+ + + +V G P AVTYN Y K D
Sbjct: 282 QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
+K+ M DG+ T TY L Q + +A +++ M GV PD+ + +L
Sbjct: 342 DGMKILCVMSRDGVDGDT-FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 416 IHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
+ GLC+ K +A ++ + + +T+ + +GL ++D
Sbjct: 401 LDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKAD 443
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 162/364 (44%), Gaps = 32/364 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+SL + L P + ++ +ID++ + Q + A ++ M + + P+ T+ LI
Sbjct: 168 AMSLVDQIVGLGYEP-NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
RL G ++A + + R +PDV ++ LI + K
Sbjct: 227 TRLFHS------------------GTWGVSARILSDMMRM-GISPDVITFSALIDVYGKE 267
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G++ A+ NEM++R + PN+VTYN L+NG+C + +A KV + +
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC----------IHGLLDEAKKVLNVLVS 317
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+G P+ +++ +++ Y +A + + +M G+ TY ++ + G+
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
AE + MV GV P T+N AL + +++ TY +++
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII-TYNIII 436
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI-EKGF 440
+ KAD + ++ + GV PD+ Y ++ GL ++ WREA + + +M E G
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496
Query: 441 LPQK 444
+P K
Sbjct: 497 MPIK 500
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 51/306 (16%)
Query: 206 TAQSFLN-EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR---------DADKV 255
TA+ FL+ ++E+G N+VT L +C + + +R DA +
Sbjct: 12 TAKGFLHRHLLEKG---NLVT--ALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTL 66
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
F +M E P + FS +L ++ +K + + FR ++ GI + ++T++I C
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 316 CGRLE-----------------------------------DAEGLFDEMVRSGVSPCAVT 340
C RL +A L D++V G P V
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN + ++AL + K MK+ G+ P TY L+ + GV I DM
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGI-RPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
G+ PD+ ++ LI + + EA + + EMI++ P VT+ +L GL +L
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 461 RTWRRL 466
+++
Sbjct: 306 DEAKKV 311
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 181/396 (45%), Gaps = 41/396 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT---------- 150
SF+L+I + K+R D A ++ M +R P+ T+ L+ L + +
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 151 TSEH-------FTVLLDTLCKYG-YVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
SE + VL+D LCK G ++ V N + C P+ Y LI+G C G
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV--PNEVTYNTLIHGLCLKG 306
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ A S L MV PN VTY L+NG+ + +R DA ++ M ER
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK----------QRRATDAVRLLSSMEER 356
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G + +S+++ + K + ++ +R M E+G P + Y+ ++ L G+ +A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+ + + M+ SG P A TY+ K + + A++++K+M + G CS Y VL+
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG-CSRNKFCYSVLID 475
Query: 383 MFLKADMIGVVKE---IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI--- 436
+G VKE +W M G+ PD Y+ +I GLC A + + EM+
Sbjct: 476 GLCG---VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 437 EKGFLPQKVTFETLYRGL-IQSDMLRTWRRLKKKLD 471
E P VT+ L GL +Q D+ R L LD
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 179/420 (42%), Gaps = 32/420 (7%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
+ I+ +F A + + L S+ +I++ A FD +L++ + + +F
Sbjct: 56 EAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSF 115
Query: 138 LVLIR----------------RLVSD--TKTTSEHFTVLLDTLCKYGYVKLAAEVFN--- 176
+V+ R R+V + K + + F +L+ + G E ++
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 177 GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRK 236
+ + +P+ + ++I CKL V+ A M ER P+ TY L++G+C+
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK- 234
Query: 237 VSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKE 296
EER I +A + DEM+ G P +++++ + M
Sbjct: 235 -----EER----IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 297 QGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
+G P TY ++I L G+L+ A L + MV S P VTY ++ A
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 357 ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
A++L M+E G H Y VL+ K +WR M E G P++ +Y++L+
Sbjct: 346 AVRLLSSMEERGY-HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
GLC K EA + MI G LP T+ +L +G ++ + ++ K++D+ S
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 166/394 (42%), Gaps = 57/394 (14%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ LI + + D A L+ M PN T+ LI LV + T LL
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA--VRLLS 351
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
++ + GY + + +Y+VLI G K G+ E A S +M E+G +
Sbjct: 352 SMEERGY-----------------HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 394
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+V Y+VL++G+CR E +A ++ + M G P+ ++S ++ + +
Sbjct: 395 PNIVVYSVLVDGLCR----------EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ ++ ++ M + G Y+ +I L GR+++A ++ +M+ G+ P V
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 341 YNCFFKEYRGRKDADSALKLFKKM--KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
Y+ K G D+ALKL+ +M +E+ P TY +LL I ++
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 399 DMKESGVGPDLDLYTLLIHGLCE---------------------RKKWREACQFFVEMIE 437
M + G PD+ ++ L E R++ AC M+
Sbjct: 565 SMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLG 624
Query: 438 KGFLPQKVTFETLYRGL-----IQSDMLRTWRRL 466
K P+ T+ + R + I + + + WR L
Sbjct: 625 KYLAPKTSTWAMIVREICKPKKINAAIDKCWRNL 658
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 179/378 (47%), Gaps = 43/378 (11%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+ LFN P + +++++I+ + A++ + EM ++ + P+ ++ LI
Sbjct: 526 AVKLFNEMAEWNVKP-NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG-NKRHCRFNPDVKMYTVLIYGWCK 200
LC G A +G +K +C N YT L++G+C+
Sbjct: 585 H------------------GLCLTGQASEAKVFVDGLHKGNCELNEIC--YTGLLHGFCR 624
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVF---- 256
G++E A S EMV+RG++ ++V Y VL++G SL ++R K+F
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG-----SLKHKDR---------KLFFGLL 670
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
EM +RG++PD ++ ++ S+ + + + +M +G P TYT+VI L
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY-RGRKDADSALKLFKKMKEDGLCSPTAH 375
G + +AE L +M P VTY CF +G D A++L + + GL + TA
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTA- 788
Query: 376 TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM 435
TY +L++ F + I E+ M GV PD YT +I+ LC R ++A + + M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 436 IEKGFLPQKVTFETLYRG 453
EKG P +V + TL G
Sbjct: 849 TEKGIRPDRVAYNTLIHG 866
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 31/374 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF----------------LVLIRRL 144
++ L+ + KV++F++ +++ EM +P+ + L L++R+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 145 VSDTKTTSEHF--TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
V D + F L+D+LCK G AE+ P+ Y++LI +C+ G
Sbjct: 359 V-DFGVSPNLFVYNALIDSLCK-GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++TA SFL EMV+ G++ +V YN L+NG C+ + E F EM +
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF----------MAEMINK 466
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
+EP V +++ ++ Y K +L + M +GI P++ T+T+++ L G + DA
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
LF+EM V P VTYN + Y D A + K+M E G+ P ++Y L+
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV-PDTYSYRPLIH 585
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K + + + YT L+HG C K EA EM+++G
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 443 QKVTFETLYRGLIQ 456
V + L G ++
Sbjct: 646 DLVCYGVLIDGSLK 659
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 178/386 (46%), Gaps = 29/386 (7%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----RRLVSDT--------- 148
++ LID++ K R+F A L M + L PN T+ +LI RR DT
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 149 ----KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
K + + L++ CK+G + AAE F + + P V YT L+ G+C G++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDIS-AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
A +EM +GI P++ T+ LL+G+ R IRDA K+F+EM E +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA----------GLIRDAVKLFNEMAEWNV 538
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
+P+ ++++++ Y + + + M E+GI P +Y +I L G+ +A+
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
D + + + Y + + AL + ++M + G+ YGVL+
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV-DLDLVCYGVLIDGS 657
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
LK + + ++M + G+ PD +YT +I + ++EA + MI +G +P +
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 445 VTFETLYRGLIQSDMLRTWRRLKKKL 470
VT+ + GL ++ + L K+
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKM 743
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 27/360 (7%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ LL L K+ + LA E+FN + PDV +YT +I C+L + A+ + M
Sbjct: 195 LSALLHGLVKFRHFGLAMELFN-DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD--------------------- 253
G + N+V YNVL++G+C+K + ++ + D
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 254 ----KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSV 309
++ DEM P + S ++ + K + +L+ + + + G+ P + Y ++
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 310 IKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
I L + +AE LFD M + G+ P VTY+ + R D+AL +M + GL
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 370 CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
+ + Y L+ K I + +M + P + YT L+ G C + K +A
Sbjct: 434 -KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 430 QFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
+ + EM KG P TF TL GL ++ ++R +L ++ E ++ N ++ Y
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 168/423 (39%), Gaps = 48/423 (11%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE--- 153
LS ++ LI+ K A + EM + L P T+ L+ S K
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 154 --------------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
FT LL L + G ++ A ++FN P+ Y V+I G+C
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN-EMAEWNVKPNRVTYNVMIEGYC 553
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF-------------- 245
+ G + A FL EM E+GI P+ +Y L++G+C + F
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 246 -----------ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
E + +A V EM +RG++ D+ + +++ + +L + M
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
++G+ P YTS+I + G ++A G++D M+ G P VTY
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA--DMIGVVKEIWRDMKESGVGPDLDLY 412
+ A L KM+ P TYG L + K DM V+ + G+ + Y
Sbjct: 734 NEAEVLCSKMQPVS-SVPNQVTYGCFLDILTKGEVDMQKAVE--LHNAILKGLLANTATY 790
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
+LI G C + + EA + MI G P +T+ T+ L + + ++ L + E
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 473 ESI 475
+ I
Sbjct: 851 KGI 853
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 40/258 (15%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF------ 155
+ +LID K + L + L+ EM R L P+ + +I D K+ + F
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI-----DAKSKTGDFKEAFGI 704
Query: 156 ----------------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
T +++ LCK G+V AEV + P+ Y +
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVN-EAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 200 KLGRVETAQSF-LNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
K G V+ ++ L+ + +G+ N TYN+L+ G CR + I +A ++
Sbjct: 764 K-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCR----------QGRIEEASELITR 812
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M G+ PD +++ +++ R + + +++ + M E+GI P Y ++I G
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 319 LEDAEGLFDEMVRSGVSP 336
+ A L +EM+R G+ P
Sbjct: 873 MGKATELRNEMLRQGLIP 890
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 126/326 (38%), Gaps = 46/326 (14%)
Query: 169 KLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNV 228
KL FN H F+ + +LI+ K A S L ++ R ++P+ V +NV
Sbjct: 85 KLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNV 143
Query: 229 LLNGVCRKVSLHPEERFE---------RTIRDADKVFDEMRER-GIEPDVTSFSIVLHVY 278
L + K L F+ R + D VF M + + P+V + S +LH
Sbjct: 144 LFS-CYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGL 202
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+ L+++ F M GI P V YT VI+ L L A+ + M +G
Sbjct: 203 VKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNI 262
Query: 339 VTYNCFFKEYRGRKDADSALKL-----FKKMKED---------GLC-------------- 370
V YN ++ A+ + K +K D GLC
Sbjct: 263 VPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 371 ------SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
SP+ L++ K I + + + + GV P+L +Y LI LC+ +K
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 425 WREACQFFVEMIEKGFLPQKVTFETL 450
+ EA F M + G P VT+ L
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSIL 408
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 183/438 (41%), Gaps = 70/438 (15%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD-------- 147
PL F+ L+ + + L+ +MD+ + P+ T +LI L
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 148 ---------------TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYT 192
K S HF L+D LCK G +K A E+ K R P+ Y
Sbjct: 351 VFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYN 410
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDA 252
LI G+C+ G++ETA+ ++ M E I+PNVVT N ++ G+CR L+ F
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF------- 463
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
F +M + G++ +V ++ ++H + ++ + M E G P Y ++I
Sbjct: 464 ---FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 313 LASCGRLEDA--------EGLFD---------------------------EMVRSGVSPC 337
L R DA EG F +M + G P
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
++TYN + KD +S ++ ++M+EDGL PT TYG ++ + + +++
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGL-DPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 398 RDMK-ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+DM S V P+ +Y +LI+ + + +A EM K P T+ L++ L +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 457 SDMLRTWRRLKKKLDEES 474
T +L ++ E+S
Sbjct: 700 KTQGETLLKLMDEMVEQS 717
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 46/330 (13%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
+++ L K G V AA +FNG + F+ DV YT LI + GR A + +M
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 216 ERGIEPNVVTYNVLLN----------------------GV-------------CRKVSLH 240
E G +P ++TYNV+LN G+ C++ SLH
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
E A +VF+EM+ G D +++ +L VY ++H+P+ ++ M G
Sbjct: 296 QE---------AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
P++ TY S+I A G L++A L ++M G P TY + +SA+ +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLC 420
F++M+ G C P T+ ++M+ + +I+ ++ G+ PD+ + L+
Sbjct: 407 FEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 421 ERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ E F EM GF+P++ TF TL
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 32/369 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV-----------------LIRR 143
S+ LI A ++ A + +M++ P T+ V L+ +
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYV-KLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
+ SD + L T CK G + + AA+VF + F+ D Y L+ + K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE-EMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
R + A LNEMV G P++VTYN L++ R + + +A ++ ++M E+
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR----------DGMLDEAMELKNQMAEK 378
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G +PDV +++ +L + RA K + ++ F M+ G P + T+ + IK + G+ +
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK-LFKKMKEDGLCSPTAHTYGVLL 381
+FDE+ G+SP VT+N + G+ DS + +FK+MK G P T+ L+
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVF-GQNGMDSEVSGVFKEMKRAGFV-PERETFNTLI 496
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
+ + ++R M ++GV PDL Y ++ L W ++ + EM +
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 442 PQKVTFETL 450
P ++T+ +L
Sbjct: 557 PNELTYCSL 565
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 147/367 (40%), Gaps = 29/367 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE------- 153
++ L+ + + + A + EM PN TF I+ + K T
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 154 ----------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ LL + G + VF KR F P+ + + LI + + G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR-AGFVPERETFNTLISAYSRCGS 504
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
E A + M++ G+ P++ TYN +L + R E KV EM +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE----------KVLAEMEDGR 554
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+P+ ++ +LH Y+ + L + I P +++ + C L +AE
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
F E+ G SP T N Y R+ A + MKE G +P+ TY L+ M
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF-TPSMATYNSLMYM 673
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
++ G +EI R++ G+ PD+ Y +I+ C + R+A + F EM G +P
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 444 KVTFETL 450
+T+ T
Sbjct: 734 VITYNTF 740
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 153/385 (39%), Gaps = 65/385 (16%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ L+D K + A +++ EM +P+ T+ LI D
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD------------- 362
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
G + A E+ N PDV YT L+ G+ + G+VE+A S EM G +
Sbjct: 363 -----GMLDEAMELKNQMAEKGT-KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+ T+N + + +F + K+FDE+ G+ PD+ +++ +L V+ +
Sbjct: 417 PNICTFNAFIKMYGNR------GKFTEMM----KIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
F+ MK G P T+ ++I + CG E A ++ M+ +GV+P T
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI---- 396
YN + + K+ +M EDG C P TY LL + IG++ +
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 397 -------------------------------WRDMKESGVGPDLDLYTLLIHGLCERKKW 425
+ ++KE G PD+ ++ R+
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 426 REACQFFVEMIEKGFLPQKVTFETL 450
+A M E+GF P T+ +L
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSL 670
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 16/324 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ LLD K K A +V N + F+P + Y LI + + G ++ A N+M
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT--IRDADKVFDEMRERGIEPDVTSFS 272
E+G +P+V TY LL+G FER + A +F+EMR G +P++ +F+
Sbjct: 376 AEKGTKPDVFTYTTLLSG------------FERAGKVESAMSIFEEMRNAGCKPNICTFN 423
Query: 273 IVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
+ +Y K + F + G+ P + T+ +++ G + G+F EM R+
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGV 392
G P T+N Y + A+ ++++M + G+ +P TY +L + M
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV-TPDLSTYNTVLAALARGGMWEQ 542
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
+++ +M++ P+ Y L+H K+ E+ P+ V +TL
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 453 GLIQSDMLRTWRRLKKKLDEESIS 476
+ D+L R +L E S
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFS 626
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 146/330 (44%), Gaps = 40/330 (12%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
S+++ ++ +A+ ++ + +++ EM+ PN T+ L+ + + H
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH----- 579
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
LA EV++G P + L+ K + A+ +E+ ERG
Sbjct: 580 ---------SLAEEVYSG-----VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
P++ T N +++ R+ + + A+ V D M+ERG P + +++ +++++S
Sbjct: 626 SPDITTLNSMVSIYGRR----------QMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
R+ S + R + +GI P + +Y +VI R+ DA +F EM SG+ P +
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
TYN F Y + A+ + + M + G C P +TY ++ + K + K D
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHG-CRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Query: 400 MKE----SGVGPDLDLYTLLIHGLCERKKW 425
++ + G DL L ++ KKW
Sbjct: 795 LRNLDPHAPKGEDLRLLERIV------KKW 818
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
D + +I++ + + + + + F ++E G V +YTS+I A+ GR +A +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDA--DSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
+M G P +TYN + G+ + L +KMK DG+ +P A+TY L+
Sbjct: 232 KKMEEDGCKPTLITYNVILNVF-GKMGTPWNKITSLVEKMKSDGI-APDAYTYNTLITCC 289
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
+ + +++ +MK +G D Y L+ + + +EA + EM+ GF P
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 445 VTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
VT+ +L + ML LK ++ E+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKG 379
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 176/405 (43%), Gaps = 32/405 (7%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL + +A+S S ++ + +D + K +++D + + M L +T ++
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIM 162
Query: 142 RRLVS-----------------DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
RR + +E +LLDTLCK V+ A V K H
Sbjct: 163 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH--I 220
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER 244
P+ + + I+GWCK RVE A + EM G P V++Y ++ C ++
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC--------QQ 272
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
FE ++ EM G P+ +++ ++ + + + +L MK G P
Sbjct: 273 FE--FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 305 TYTSVIKCLASCGRLEDAEGLFD-EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
Y +I LA GRLE+AE +F EM GVS TYN Y + D A++L K+
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 364 MKEDGLCSPTAHTYGVLLQ-MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
M+ LC+P HTY LL+ F + D++ V K + + + + D YT LI LC
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLK 467
A F EMI + P+ T L + + +M + R++
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIE 495
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 176/405 (43%), Gaps = 32/405 (7%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL + +A+S S ++ + +D + K +++D + + M L +T ++
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIM 162
Query: 142 RRLVS-----------------DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
RR + +E +LLDTLCK V+ A V K H
Sbjct: 163 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH--I 220
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER 244
P+ + + I+GWCK RVE A + EM G P V++Y ++ C ++
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC--------QQ 272
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
FE ++ EM G P+ +++ ++ + + + +L MK G P
Sbjct: 273 FE--FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 305 TYTSVIKCLASCGRLEDAEGLFD-EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
Y +I LA GRLE+AE +F EM GVS TYN Y + D A++L K+
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 364 MKEDGLCSPTAHTYGVLLQ-MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
M+ LC+P HTY LL+ F + D++ V K + + + + D YT LI LC
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLK 467
A F EMI + P+ T L + + +M + R++
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIE 495
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 183/438 (41%), Gaps = 70/438 (15%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD-------- 147
PL F+ L+ + + L+ +MD+ + P+ T +LI L
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 148 ---------------TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYT 192
K S HF L+D LCK G +K A E+ K R P+ Y
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDA 252
LI G+C+ G++ETA+ ++ M E I+PNVVT N ++ G+CR L+ F
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF------- 463
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
F +M + G++ +V ++ ++H + ++ + M E G P Y ++I
Sbjct: 464 ---FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 313 LASCGRLEDA--------EGLFD---------------------------EMVRSGVSPC 337
L R DA EG F +M + G P
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
++TYN + KD +S ++ ++M+EDGL PT TYG ++ + + +++
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGL-DPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 398 RDMK-ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+DM S V P+ +Y +LI+ + + +A EM K P T+ L++ L +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 457 SDMLRTWRRLKKKLDEES 474
T +L ++ E+S
Sbjct: 700 KTQGETLLKLMDEMVEQS 717
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 79/429 (18%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------- 154
F ID K A + M + ++PN T+ +LI+ L D +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 155 ----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
++ L+D CK G ++ ++ + + PDV +Y VL+ G K G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE-DMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCR--------KV-------SLHPE------- 242
A F +M+ + I NVV +N L++G CR KV + P+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 243 ---ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
E + +A +F M + G+EPD ++ ++ + + KP + L F +M+ I
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRG--------- 350
+A VI L C R+EDA F+ ++ + P VTYN Y
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 351 --------------------------RKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
D D A+++F M E G P A TYG L+ F
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTYGCLMDWF 716
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
K+ I +++ +M+E G+ P + Y+++I GLC+R + EA F + I+ LP
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 445 VTFETLYRG 453
V + L RG
Sbjct: 777 VAYAILIRG 785
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 193/461 (41%), Gaps = 81/461 (17%)
Query: 94 NPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------ 141
P + +F LI+ K + D A+ L M+QR + P+ + LI
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 142 -----RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR-FNPDVKMYTVLI 195
+ L K F+ +D K G + A+ V+ + C+ +P+V YT+LI
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK--RMLCQGISPNVVTYTILI 398
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR---------------KVSLH 240
G C+ GR+ A ++++RG+EP++VTY+ L++G C+ K+
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 241 PEERFERTIRD----------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDK 290
P+ + D A + +M + I +V F+ ++ + R ++ +L
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 291 FRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY-- 348
FR+M GI P VAT+T+V++ GRLE+A LF M + G+ P A+ Y +
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 349 ---------------RGRKDADSAL------------------KLFKKMKEDGLCSPTAH 375
R + AD A+ K F + E G P
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE-GKMEPDIV 637
Query: 376 TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM 435
TY ++ + + + I+ +K + GP+ T+LIH LC+ A + F M
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 436 IEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
EKG P VT+ L +S + +L +++ E+ IS
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 141/301 (46%), Gaps = 16/301 (5%)
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
C P+V + LI G+CK G ++ A M +RGIEP+++ Y+ L++G + L
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
K+F + +G++ DV FS + VY ++ + ++ M QGI P
Sbjct: 340 ----------GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V TYT +IK L GR+ +A G++ ++++ G+ P VTY+ + + S L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
+ M + G P YGVL+ K ++ M + ++ ++ LI G C
Sbjct: 450 EDMIKMGY-PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYR-----GLIQSDMLRTWRRLKKKLDEESIS 476
++ EA + F M G P TF T+ R G ++ + +R K L+ ++++
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 477 F 477
+
Sbjct: 569 Y 569
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 150/324 (46%), Gaps = 29/324 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF------ 155
F+ LID ++ +FD A ++ M + P+ +TF ++R + + + F
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 156 -----------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
L+D CK+ + ++F+ +R+ + + D+ + V+I+ K R+
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRI 617
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
E A F N ++E +EP++VTYN ++ G C R + +A+++F+ ++
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSL----------RRLDEAERIFELLKVTPF 667
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
P+ + +I++HV + + ++ F +M E+G P TY ++ + +E +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
LF+EM G+SP V+Y+ R D A +F + + L P Y +L++ +
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL-PDVVAYAILIRGY 786
Query: 385 LKADMIGVVKEIWRDMKESGVGPD 408
K + ++ M +GV PD
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPD 810
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 202/477 (42%), Gaps = 41/477 (8%)
Query: 24 RHFTSSTDETDAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIAL 83
R F+S + + A +SK + + + F+ ++SS+ +G + AL
Sbjct: 32 RGFSSDSAKALAAGISKAIKEGN--FNLLDSSV--YGSNLQRNETNLVLLSLESEPNSAL 87
Query: 84 SLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRR 143
F +A+ P ++ H+LI + FD+A ++ EM +T F VL
Sbjct: 88 KYFRWAEISGKDPSFYTIAHVLI----RNGMFDVADKVFDEM----ITNRGKDFNVLGS- 138
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ D ++ L++ C+YG V A E+F + + P +Y +L R
Sbjct: 139 -IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDR 196
Query: 204 VETAQSFLNEMVERGIEPNVVT-YNVLLNG------VCRKVSLH---PEERFERTIRDAD 253
V+ +++ GIEP+ V+ + +L+ V + + H E F I +
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 254 KVFDEMRERGIE---------------PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
KV + IE P+V +F +++ + + + + D F++M+++G
Sbjct: 257 KVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
I P + Y+++I G L LF + + GV V ++ Y D +A
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
++K+M G+ SP TY +L++ + I ++ + + G+ P + Y+ LI G
Sbjct: 377 VVYKRMLCQGI-SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
C+ R + +MI+ G+ P V + L GL + ++ R K+ +SI
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+ +F+ + P + ++ L+D +K + +++L EM ++ ++P+
Sbjct: 690 AIRMFSIMAEKGSKP-NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS-------- 740
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+VS +++++D LCK G V A +F+ + PDV Y +LI G+CK+
Sbjct: 741 --IVS--------YSIIIDGLCKRGRVDEATNIFH-QAIDAKLLPDVVAYAILIRGYCKV 789
Query: 202 GRVETAQSFLNEMVERGIEPN 222
GR+ A M+ G++P+
Sbjct: 790 GRLVEAALLYEHMLRNGVKPD 810
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 33/400 (8%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF + KS P P + F L+ +AK+ +FDL L +M ++ N T+ +
Sbjct: 59 AIGLFGDMVKSRPFPSIVE--FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGY---VKLAAEVFNGNKRHCR-------------- 183
I ++ + +L + K GY + + NG R
Sbjct: 117 INYFCRRSQLSLA--LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 184 -FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ PD +T L++G + + A + + MV +G +P++VTY ++NG+C+
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK------- 227
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
R E + A + ++M + IE DV ++ ++ + + D F M+ +GI P
Sbjct: 228 -RGEPDL--ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
V TY +I CL + GR DA L +M+ ++P V +N + A KL+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+M + C P Y L++ F K + E++R+M + G+ + YT LIHG +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRT 462
+ A F +M+ G P +T+ L GL + + T
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 174/357 (48%), Gaps = 37/357 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +I+ + K + DLA L+ +M++ + + V+I + ++D
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD-----VVI-------------YNTIID 258
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LCKY ++ A ++FN + PDV Y LI C GR A L++M+E+ I
Sbjct: 259 GLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM-RERGIEPDVTSFSIVLHVYS 279
P++V +N L++ + E + +A+K++DEM + + PDV +++ ++ +
Sbjct: 318 PDLVFFNALIDAFVK----------EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ + + ++ FR M ++G+ TYT++I ++A+ +F +MV GV P +
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR- 398
TYN + ++AL +F+ M++ + TY +++ KA G V++ W
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDM-KLDIVTYTTMIEALCKA---GKVEDGWDL 483
Query: 399 --DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ GV P++ YT ++ G C + EA FVEM E G LP T+ TL R
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 32/337 (9%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR------------RLVSDTK 149
++ +ID + K + D A+ L +M+ + + P+ T+ LI RL+SD
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 150 TTSEH-----FTVLLDTLCKYGYVKLAAEVFNG--NKRHCRFNPDVKMYTVLIYGWCKLG 202
+ + F L+D K G + A ++++ +HC PDV Y LI G+CK
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF--PDVVAYNTLIKGFCKYK 370
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
RVE EM +RG+ N VTY L++G + R +A VF +M
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA----------RDCDNAQMVFKQMVSD 420
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G+ PD+ +++I+L + +L F M+++ + + TYT++I+ L G++ED
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
LF + GV P VTY + + + A LF +MKEDG P + TY L++
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIR 539
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
L+ E+ ++M+ G D + L+ + L
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 180/396 (45%), Gaps = 38/396 (9%)
Query: 85 LFNYAKSLPNPPLSHS--SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR 142
+ + + + N +SH+ ++ + I+ + Q LA ++ +M + P+ T L+
Sbjct: 94 VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN 153
Query: 143 RLVSDTKTTSEHFTVLLDTLCKYGY-------VKLAAEVFNGNK-------------RHC 182
+ + L+D + + GY L +F NK + C
Sbjct: 154 GFCHGNRISEA--VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+ PD+ Y +I G CK G + A + LN+M + IE +VV YN +++G+C+
Sbjct: 212 Q--PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY------ 263
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
+ + DA +F++M +GI+PDV +++ ++ + + M E+ I P
Sbjct: 264 ----KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSG-VSPCAVTYNCFFKEYRGRKDADSALKLF 361
+ + ++I G+L +AE L+DEMV+S P V YN K + K + +++F
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
++M + GL T TY L+ F +A + +++ M GV PD+ Y +L+ GLC
Sbjct: 380 REMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
A F M ++ VT+ T+ L ++
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 172/393 (43%), Gaps = 33/393 (8%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
+AL++ L P S + + L++ + A L+ +M + P+ TF L
Sbjct: 128 LALAILGKMMKLGYGP-SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 186
Query: 141 IRRLVSDTKTTSE-----------------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
+ L K + + +++ LCK G LA + N ++ +
Sbjct: 187 VHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-K 245
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
DV +Y +I G CK ++ A N+M +GI+P+V TYN L++ +C
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN-------- 297
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF--RMMKEQGICP 301
+ R DA ++ +M E+ I PD+ F+ ++ + + K + +K M+K + P
Sbjct: 298 -YGRW-SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK-LVEAEKLYDEMVKSKHCFP 354
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V Y ++IK R+E+ +F EM + G+ VTY + +D D+A +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
K+M DG+ P TY +LL + ++ M++ + D+ YT +I LC+
Sbjct: 415 KQMVSDGV-HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
K + F + KG P VT+ T+ G
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 11/274 (4%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+++ A +MV+ P++V ++ LL+ + + +F+ I + ++M+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM------NKFDLVI----SLGEQMQNL 104
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI ++ ++SI ++ + R + L+L M + G P++ T S++ R+ +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
L D+MV G P VT+ A A+ L ++M G C P TYG ++
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 223
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K + + M++ + D+ +Y +I GLC+ K +A F +M KG P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
T+ L L RL + E++I+
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 191/420 (45%), Gaps = 39/420 (9%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDT--MAKVRQFDLAWQLITEMDQRSLTPNPS 135
H K+AL + P H + I T + + R +D A ++ E+ SL S
Sbjct: 89 HGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKEL---SLMSGKS 145
Query: 136 TF----LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMY 191
+F L+ RL + + + +L+ + G ++ + E+F + FNP V
Sbjct: 146 SFVFGALMTTYRLCNSNPSV---YDILIRVYLREGMIQDSLEIFRLMGLY-GFNPSVYTC 201
Query: 192 TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE----ERFER 247
++ K G + SFL EM++R I P+V T+N+L+N +C + S ++ E+
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 261
Query: 248 T---------------------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQL 286
+ + A ++ D M+ +G++ DV ++++++H R+++
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 287 SLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
R M+++ I P TY ++I ++ G++ A L +EM+ G+SP VT+N
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
+ + ALK+F M+ GL +P+ +YGVLL K + + + MK +GV
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGL-TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
YT +I GLC+ EA EM + G P VT+ L G + +T + +
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 173/410 (42%), Gaps = 31/410 (7%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
IA L N S P +H +F+ LID F A ++ M+ + LTP+ ++ VL
Sbjct: 356 IASQLLNEMLSFGLSP-NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 141 IRRLVSDTK-----------------TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
+ L + + +T ++D LCK G++ A + N +
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD-G 473
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
+PD+ Y+ LI G+CK+GR +TA+ + + G+ PN + Y+ L+ CR L
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL---- 529
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
++A ++++ M G D +F++++ +A K + + R M GI P
Sbjct: 530 ------KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
++ +I + G A +FDEM + G P TY K A K K
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
+ T Y LL K+ + ++ +M + + PD YT LI GLC +
Sbjct: 644 LHAVPAAVDTV-MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Query: 424 KWREACQFFVEMIEKG-FLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
K A F E +G LP KV + G+ ++ + ++++D
Sbjct: 703 KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 167/450 (37%), Gaps = 86/450 (19%)
Query: 88 YAKSLPNPPLSHSS--FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV 145
+ KSL P + + ++ L+ M K A L EM QRS+ P+ T+ LI L
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 146 SDTKTTSE------------------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPD 187
KT +T +D + K G K A F + PD
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTPD 758
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVL------------------ 229
+ +I G+ ++G++E L EM + PN+ TYN+L
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 230 ---LNGV------CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH---- 276
LNG+ C + L E + K+ RG+E D +F++++
Sbjct: 819 SIILNGILPDKLTCHSLVLGICE--SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 277 -------------------------------VYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
V +R H+ Q S M +QGI P
Sbjct: 877 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y +I L G ++ A + +EM+ + P V + + AD A L + M
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
+ L PT ++ L+ + K + E+ M G+ DL Y +LI GLC +
Sbjct: 997 KMKLV-PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1055
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLI 455
A + + EM GFL T++ L RGL+
Sbjct: 1056 ALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 159/396 (40%), Gaps = 30/396 (7%)
Query: 99 HSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL-----------VSD 147
H +F++L+ ++ K + A + + M + PN +F LI V D
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Query: 148 TKTTSEH------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
T H + LL LCK G+++ AE F + D MY L+ CK
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLR-EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G + A S EMV+R I P+ TY L++G+CRK F + E
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK----------EAEA 716
Query: 262 RG-IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
RG + P+ ++ + +A + + + M G P + T ++I + G++E
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
L EM P TYN Y RKD ++ L++ + +G+ P T L
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL-PDKLTCHSL 835
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ +++M+ + +I + GV D + +LI C + A M G
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
K T + + L ++ + R + ++ ++ IS
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 931
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 170/377 (45%), Gaps = 43/377 (11%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF----------------------LV 139
F + +A++R FD AW L+ E+ R PN +F V
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFV 163
Query: 140 LIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
+ + + K + F +LL C +K A +F K H RFNPDVK +L+ G+
Sbjct: 164 KMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFE--KLHSRFNPDVKTMNILLLGFK 221
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
+ G V + F +EMV+RG +PN VTY + ++G C+K R +A ++F++M
Sbjct: 222 EAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKK----------RNFGEALRLFEDM 271
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
+ V + ++H A + F + ++G+ P Y +++ L CG +
Sbjct: 272 DRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDV 331
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD--ADSALKLFKKMKEDGLCSPTAHTY 377
A + EM G+ P +VT++ F K+ + + ++KMKE L P T
Sbjct: 332 SGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLV-PKTPTI 390
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
+L+++F + + ++W+ M E G P LL LC R++ +A + + +E
Sbjct: 391 VMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVE 450
Query: 438 KGFLPQKVTFETLYRGL 454
+G + E +YR L
Sbjct: 451 RG----RCVSEPVYRML 463
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 183/440 (41%), Gaps = 70/440 (15%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD-------- 147
PL F+ L+ + + L+ +MD+ + P+ T +LI L
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 148 ---------------TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYT 192
K S HF L+D LCK G +K A E+ K R P+ Y
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDA 252
LI G+C+ G++ETA+ ++ M E I+PNVVT N ++ G+CR L+ F
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF------- 463
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
F +M + G++ +V ++ ++H + ++ + M E G P Y ++I
Sbjct: 464 ---FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 313 LASCGRLEDA--------EGLFD---------------------------EMVRSGVSPC 337
L R DA EG F +M + G P
Sbjct: 521 LCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
++TYN + KD +S ++ ++M+EDGL PT TYG ++ + + +++
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMREDGL-DPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 398 RDMK-ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+DM S V P+ +Y +LI+ + + +A EM K P T+ L++ L +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 457 SDMLRTWRRLKKKLDEESIS 476
T +L ++ E ++
Sbjct: 700 KTQGETLLKLMDEMVEHLVN 719
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 160/379 (42%), Gaps = 41/379 (10%)
Query: 103 HLLIDTMAKVRQFDLAWQLITEMDQRS--LTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++++D + + D A++++ EM Q+ PN T +++ + + T E L+
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+G +P+ T I CK R TA L+++++
Sbjct: 249 RFSSHG-----------------VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTP 291
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
+N LL+ + R + + R D V +M E I PDV + I+++ +
Sbjct: 292 LEAPPFNALLSCLGRNMDIS---------RMNDLVL-KMDEVKIRPDVVTLGILINTLCK 341
Query: 281 AHKPQLSLDKFRMMK----EQG--ICPTVATYTSVIKCLASCGRLEDAEGLFDEM-VRSG 333
+ + +L+ F M+ + G I + ++I L GRL++AE L M +
Sbjct: 342 SRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
P AVTYNC Y ++A ++ +MKED + P T ++ + + +
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI-KPNVVTVNTIVGGMCRHHGLNMA 460
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ DM++ GV ++ Y LIH C +A ++ +M+E G P + L G
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 454 LIQ----SDMLRTWRRLKK 468
L Q D +R +LK+
Sbjct: 521 LCQVRRDHDAIRVVEKLKE 539
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 194/445 (43%), Gaps = 76/445 (17%)
Query: 88 YAKSLPNPPL-SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS 146
+ K + + PL S F ++ +AK + +DL L M+ + + ++ ++I L
Sbjct: 57 FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116
Query: 147 DTKTTSEHFTVLLDT---LCKYGY---VKLAAEVFNGNKRHCR---------------FN 185
++ F + L + K+GY V + + NG + R F
Sbjct: 117 CSR-----FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PDV +Y +I G CK+G V A + M G+ + VTYN L+ G+C R+
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC------CSGRW 225
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
DA ++ +M R I P+V +F+ V+ V+ + K ++ + M + + P V T
Sbjct: 226 S----DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y S+I L GR+++A+ + D MV G P VTYN + K D KLF++M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEI-----------------------WR---- 398
+ GL T TY ++Q + +A +EI WR
Sbjct: 342 QRGLVGDTI-TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 399 -----DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+M++S + D+ Y ++IHG+C+ +A F + KG P V++ T+ G
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 454 LIQSDMLRTWRR---LKKKLDEESI 475
+ R W + L +K+ E+ +
Sbjct: 461 FCRK---RQWDKSDLLYRKMQEDGL 482
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 16/281 (5%)
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
S + M GI ++ +YN+++N +CR RF + V +M + G EPDV
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRC------SRFVIAL----SVVGKMMKFGYEPDV 139
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE 328
+ S +++ + + ++ ++D M+E G P V Y ++I G + DA LFD
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
M R GV AVTYN A +L + M + P T+ ++ +F+K
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV-PNVITFTAVIDVFVKEG 258
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
+++ +M V PD+ Y LI+GLC + EA Q M+ KG LP VT+
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 449 TLYRGLIQSDMLRTWRRL-----KKKLDEESISFGSEFQNY 484
TL G +S + +L ++ L ++I++ + Q Y
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 174/391 (44%), Gaps = 34/391 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTT--------- 151
+F++ +D + + + A Q M QR P+ ++ +LI L K T
Sbjct: 116 AFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM 175
Query: 152 --------SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
++ L+ LC V LA E+ + R +Y LI G+CK GR
Sbjct: 176 IRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGR 235
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+E A++ + M + G EP++VTYNVLLN + +R A+ V EM G
Sbjct: 236 IEKAEALKSYMSKIGCEPDLVTYNVLLN------YYYDNNMLKR----AEGVMAEMVRSG 285
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLD-KFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
I+ D S++ +L + R P + + M+ +G C V +Y+++I+ A
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVV-SYSTLIETFCRASNTRKA 344
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
LF+EM + G+ VTY K + ++ A KL +M E GL SP Y +L
Sbjct: 345 YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL-SPDRIFYTTILD 403
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K+ + ++ DM E + PD Y LI GLC + EA + F +M K P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 443 QKVTFETLYRGLIQSDML----RTWRRLKKK 469
++TF+ + GLI+ L + W ++ K
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 168/399 (42%), Gaps = 71/399 (17%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF 155
P ++S F I + KV++FDL L+++M+ P+ F
Sbjct: 79 PFTYSRF---ISGLCKVKKFDLIDALLSDMETLGFIPDIWAF------------------ 117
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
V LD LC+ V A + F + R PDV YT+LI G + G+V A N M+
Sbjct: 118 NVYLDLLCRENKVGFAVQTFFCMVQRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
Query: 216 ERGIEPNVVTYNVLLNGVC--RKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
G+ P+ L+ G+C RKV L E V +E++ ++ ++
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYE-----------MVAEEIKSARVKLSTVVYNA 225
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
++ + +A + + + M + G P + TY ++ L+ AEG+ EMVRSG
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 334 VSPCAVTYNCFFK-------------------EYRGRKDADS----------------AL 358
+ A +YN K E RG D S A
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAY 345
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
+LF++M++ G+ TY L++ FL+ V K++ M E G+ PD YT ++
Sbjct: 346 RLFEEMRQKGMVMNVV-TYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
LC+ +A F +MIE P +++ +L GL +S
Sbjct: 405 LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 14/295 (4%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
F PD+ + V + C+ +V A MV+RG EP+VV+Y +L+NG+ R
Sbjct: 110 FIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRA------- 162
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF-RMMKEQGICPT 302
+ DA ++++ M G+ PD + + ++ A K L+ + +K + +
Sbjct: 163 ---GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLS 219
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
Y ++I GR+E AE L M + G P VTYN Y A +
Sbjct: 220 TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA 279
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE-IWRDMKESGVGPDLDLYTLLIHGLCE 421
+M G+ A++Y LL+ + + ++M+ G D+ Y+ LI C
Sbjct: 280 EMVRSGI-QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCR 337
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
R+A + F EM +KG + VT+ +L + ++ ++L ++ E +S
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLS 392
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 5/166 (3%)
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
Y S I L G +++A +FDEM S + YN F + A ++ M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
K G S TY + K ++ + DM+ G PD+ + + + LC K
Sbjct: 71 KPMGF-SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQS----DMLRTWRRL 466
A Q F M+++G P V++ L GL ++ D + W +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM 175
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 164/374 (43%), Gaps = 33/374 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF----- 155
++ +++ M K+ A L+++M++ + P+ + +I RL D + +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 156 ------------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
++D C +G A + NPDV + LI K G+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGK 381
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A+ +EM+ R I P+ VTYN ++ G C+ RF+ DA +FD M
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK------HNRFD----DAKHMFDLMAS-- 429
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
PDV +F+ ++ VY RA + + R + +G+ TY ++I L A+
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
LF EM+ GV P +T N + + + AL+LF+ ++ + T Y +++
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV-AYNIIIHG 546
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
K + +++ + GV PD+ Y ++I G C + +A F +M + G P
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 444 KVTFETLYRGLIQS 457
T+ TL RG +++
Sbjct: 607 NSTYNTLIRGCLKA 620
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 191/427 (44%), Gaps = 40/427 (9%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
+A+SL+ + + PL+ SF++LI + + ++ + P+ TF L
Sbjct: 124 VAISLYRKME-IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
+ L + + + L + + G+++ A +F+ P V + LI G C
Sbjct: 183 LHGLCLEDRISEA--LALFGYMVETGFLE-AVALFD-QMVEIGLTPVVITFNTLINGLCL 238
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR----KVSLHPEERFERT-IR----- 250
GRV A + +N+MV +G+ +VVTY ++NG+C+ K +L+ + E T I+
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 251 ---------------DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
DA +F EM E+GI P+V +++ ++ + + + R M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
E+ I P V T+ ++I G+L +AE L DEM+ + P VTYN + D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
A +F D + SP T+ ++ ++ +A + ++ R++ G+ + Y L
Sbjct: 419 DAKHMF-----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 416 IHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKL 470
IHG CE A F EMI G P +T L G +++ L L K+
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 471 DEESISF 477
D +++++
Sbjct: 534 DLDTVAY 540
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 142/320 (44%), Gaps = 23/320 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT-TSEHFTVLL 159
+++ +ID ++ A +L+ +M +R + P+ TF LI V + K +E +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFN-----------PDVKMYTVLIYGWCKLGRVETAQ 208
C + + G +H RF+ PDV + +I +C+ RV+
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
L E+ RG+ N TYN L++G C +L+ A +F EM G+ PD
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNA----------AQDLFQEMISHGVCPDT 502
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE 328
+ +I+L+ + K + +L+ F +++ I Y +I + ++++A LF
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
+ GV P TYN + G+ A LF KMK++G P TY L++ LKA
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAG 621
Query: 389 MIGVVKEIWRDMKESGVGPD 408
I E+ +M+ +G D
Sbjct: 622 EIDKSIELISEMRSNGFSGD 641
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 29/240 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+F+ +ID + ++ D QL+ E+ +R L N +T+ LI
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH------------------ 475
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C+ + A ++F H PD +L+YG+C+ ++E A + I+
Sbjct: 476 GFCEVDNLNAAQDLFQEMISH-GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
+ V YN++++G+C+ + +A +F + G+EPDV ++++++ +
Sbjct: 535 LDTVAYNIIIHGMCKG----------SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ F MK+ G P +TY ++I+ G ++ + L EM +G S A T
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 23/241 (9%)
Query: 236 KVSLHPEERFERTIRDADKVFDEM-RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
++ L + +++ DA FD M R R V + V+ V+ R ++P +++ +R M
Sbjct: 74 ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKM 132
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
+ + I + ++ +IKC C +L + F ++ + G P VT+N
Sbjct: 133 EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
AL LF M E G A ++ M E G+ P + +
Sbjct: 193 SEALALFGYMVETGFLEAVA---------------------LFDQMVEIGLTPVVITFNT 231
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
LI+GLC + EA +M+ KG VT+ T+ G+ + ++ L K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 475 I 475
I
Sbjct: 292 I 292
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 12/312 (3%)
Query: 146 SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
+ + T + +++D +CK G V+ A +F K PD Y +I G+ K+GR++
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR-GLVPDTVTYNSMIDGFGKVGRLD 314
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
F EM + EP+V+TYN L+N C+ L F R EM+ G++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR----------EMKGNGLK 364
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
P+V S+S ++ + + Q ++ + M+ G+ P TYTS+I G L DA L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
+EM++ GV VTY + A +LF KM G+ P +Y L+ F+
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI-PNLASYNALIHGFV 483
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
KA + E+ ++K G+ PDL LY I GLC +K A EM E G +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 446 TFETLYRGLIQS 457
+ TL +S
Sbjct: 544 IYTTLMDAYFKS 555
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 159/363 (43%), Gaps = 36/363 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++++ID M K + A L EM R L P+ T+ ++D
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY------------------NSMID 305
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
K G + F K C PDV Y LI +CK G++ F EM G++
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMC-CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNVV+Y+ L++ C+ E ++ A K + +MR G+ P+ +++ ++ +
Sbjct: 365 PNVVSYSTLVDAFCK----------EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 281 AHKPQLSLDKFRM---MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
D FR+ M + G+ V TYT++I L R+++AE LF +M +GV P
Sbjct: 415 IGNLS---DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
+YN + K+ D AL+L ++K G+ P YG + + I K +
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+MKE G+ + +YT L+ + E EM E VTF L GL ++
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 458 DML 460
++
Sbjct: 591 KLV 593
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 15/306 (4%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P V Y ++I CK G VE A+ EM RG+ P+ VTYN +++G F
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG------------F 307
Query: 246 ERTIRDADKV--FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
+ R D V F+EM++ EPDV +++ +++ + + K + L+ +R MK G+ P V
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
+Y++++ G ++ A + +M R G+ P TY + A +L +
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
M + G+ TY L+ A+ + +E++ M +GV P+L Y LIHG + K
Sbjct: 428 MLQVGV-EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQN 483
A + E+ +G P + + T GL + + + + ++ E I S
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 484 YQLKPY 489
+ Y
Sbjct: 547 TLMDAY 552
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 166/415 (40%), Gaps = 99/415 (23%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ LI+ K + + + EM L PN ++ + L+D
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY------------------STLVD 375
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
CK G ++ A + F + R P+ YT LI CK+G + A NEM++ G+E
Sbjct: 376 AFCKEGMMQQAIK-FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
NVVTY L++G+C ER +++A+++F +M G+ P++ S++ ++H + +
Sbjct: 435 WNVVTYTALIDGLC------DAER----MKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
A +L+ +K +GI P + Y + I L S ++E A+ + +EM G+ ++
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKE--------------DGLC---------------- 370
Y Y + L L +MKE DGLC
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 371 -----SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD----------------- 408
A + ++ K + + ++ M + G+ PD
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 409 ----------------LDL--YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
LDL YT L+ GL + ++A F EMI +G P +V
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 6/287 (2%)
Query: 169 KLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV---- 224
KLA + F + F V+ Y ++ + A S L EMV + +V
Sbjct: 123 KLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLW 182
Query: 225 -TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
T NV + G +L + +A + F +M+ + P S + +LH +++ K
Sbjct: 183 STRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGK 242
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
F+ M G PTV TY +I C+ G +E A GLF+EM G+ P VTYN
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 302
Query: 344 FFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
+ D + F++MK D C P TY L+ F K + + E +R+MK +
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMK-DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
G+ P++ Y+ L+ C+ ++A +F+V+M G +P + T+ +L
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 125/286 (43%), Gaps = 15/286 (5%)
Query: 190 MYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 249
+++VLI LG +E A ++M + P + N LL H + +T
Sbjct: 198 LFSVLI----DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLL---------HRFAKLGKT- 243
Query: 250 RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSV 309
D + F +M G P V +++I++ + + + F MK +G+ P TY S+
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 310 IKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
I GRL+D F+EM P +TYN + L+ +++MK +GL
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 370 CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
P +Y L+ F K M+ + + DM+ G+ P+ YT LI C+ +A
Sbjct: 364 -KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 430 QFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
+ EM++ G VT+ L GL ++ ++ L K+D +
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 49/298 (16%)
Query: 89 AKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDT 148
A +PN +S++ LI K + D A +L+ E+ R + P+ + I L S
Sbjct: 466 AGVIPN----LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 149 KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ 208
K AA+V + C + +YT L+ + K G
Sbjct: 522 KIE-------------------AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCR-KVSLHPEERFERTIRD---------------- 251
L+EM E IE VVT+ VL++G+C+ K+ + F R D
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 252 ---------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
A +F++M ++G+ PD T+++ ++ + +L M E G+
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
+ YTS++ L+ C +L+ A +EM+ G+ P V K++ D A++L
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 164/374 (43%), Gaps = 33/374 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF----- 155
++ +++ M K+ A L+++M++ + P+ + +I RL D + +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 156 ------------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
++D C +G A + NPDV + LI K G+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGK 381
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A+ +EM+ R I P+ VTYN ++ G C+ RF+ DA +FD M
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK------HNRFD----DAKHMFDLMAS-- 429
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
PDV +F+ ++ VY RA + + R + +G+ TY ++I L A+
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
LF EM+ GV P +T N + + + AL+LF+ ++ + T Y +++
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV-AYNIIIHG 546
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
K + +++ + GV PD+ Y ++I G C + +A F +M + G P
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 444 KVTFETLYRGLIQS 457
T+ TL RG +++
Sbjct: 607 NSTYNTLIRGCLKA 620
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 191/427 (44%), Gaps = 40/427 (9%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
+A+SL+ + + PL+ SF++LI + + ++ + P+ TF L
Sbjct: 124 VAISLYRKME-IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
+ L + + + L + + G+++ A +F+ P V + LI G C
Sbjct: 183 LHGLCLEDRISEA--LALFGYMVETGFLE-AVALFD-QMVEIGLTPVVITFNTLINGLCL 238
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR----KVSLHPEERFERT-IR----- 250
GRV A + +N+MV +G+ +VVTY ++NG+C+ K +L+ + E T I+
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 251 ---------------DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
DA +F EM E+GI P+V +++ ++ + + + R M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
E+ I P V T+ ++I G+L +AE L DEM+ + P VTYN + D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
A +F D + SP T+ ++ ++ +A + ++ R++ G+ + Y L
Sbjct: 419 DAKHMF-----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 416 IHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKL 470
IHG CE A F EMI G P +T L G +++ L L K+
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 471 DEESISF 477
D +++++
Sbjct: 534 DLDTVAY 540
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 142/320 (44%), Gaps = 23/320 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT-TSEHFTVLL 159
+++ +ID ++ A +L+ +M +R + P+ TF LI V + K +E +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFN-----------PDVKMYTVLIYGWCKLGRVETAQ 208
C + + G +H RF+ PDV + +I +C+ RV+
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
L E+ RG+ N TYN L++G C +L+ A +F EM G+ PD
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNA----------AQDLFQEMISHGVCPDT 502
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE 328
+ +I+L+ + K + +L+ F +++ I Y +I + ++++A LF
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
+ GV P TYN + G+ A LF KMK++G P TY L++ LKA
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAG 621
Query: 389 MIGVVKEIWRDMKESGVGPD 408
I E+ +M+ +G D
Sbjct: 622 EIDKSIELISEMRSNGFSGD 641
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 29/240 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+F+ +ID + ++ D QL+ E+ +R L N +T+ LI
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH------------------ 475
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C+ + A ++F H PD +L+YG+C+ ++E A + I+
Sbjct: 476 GFCEVDNLNAAQDLFQEMISH-GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
+ V YN++++G+C+ + +A +F + G+EPDV ++++++ +
Sbjct: 535 LDTVAYNIIIHGMCKG----------SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ F MK+ G P +TY ++I+ G ++ + L EM +G S A T
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 23/241 (9%)
Query: 236 KVSLHPEERFERTIRDADKVFDEM-RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
++ L + +++ DA FD M R R V + V+ V+ R ++P +++ +R M
Sbjct: 74 ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKM 132
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
+ + I + ++ +IKC C +L + F ++ + G P VT+N
Sbjct: 133 EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
AL LF M E G A ++ M E G+ P + +
Sbjct: 193 SEALALFGYMVETGFLEAVA---------------------LFDQMVEIGLTPVVITFNT 231
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
LI+GLC + EA +M+ KG VT+ T+ G+ + ++ L K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 475 I 475
I
Sbjct: 292 I 292
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 147/300 (49%), Gaps = 12/300 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
F +L++ CK G + A +VF+ + P V + LI G+CK+G ++ ++M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRS-LQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+ P+V TY+ L+N +C+ E + A +FDEM +RG+ P+ F+ +
Sbjct: 302 EKSRTRPDVFTYSALINALCK----------ENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+H +SR + L + ++ M +G+ P + Y +++ G L A + D M+R G+
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P +TY + D ++AL++ K+M ++G+ ++ M + +I +
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ R+M +G+ PD YT+++ C++ + + EM G +P VT+ L GL
Sbjct: 472 AL-REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 159/373 (42%), Gaps = 15/373 (4%)
Query: 83 LSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLIT-EMDQRSLTPNPSTFLVLI 141
+ F + S P + ++ +L +A F A LI + ++ S F+ L+
Sbjct: 102 FAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLV 161
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
V T L+ T G++ A + F +++H RF+ ++ L+ KL
Sbjct: 162 EMRV--TPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKH-RFDVPIRGCGNLLDRMMKL 218
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
T F E+++ G NV +N+L+N C+ E I DA KVFDE+ +
Sbjct: 219 NPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCK----------EGNISDAQKVFDEITK 268
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
R ++P V SF+ +++ Y + M++ P V TY+++I L +++
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
A GLFDEM + G+ P V + + + D + ++KM GL P Y L+
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL-QPDIVLYNTLV 387
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
F K + + I M G+ PD YT LI G C A + EM + G
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 442 PQKVTFETLYRGL 454
+V F L G+
Sbjct: 448 LDRVGFSALVCGM 460
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 142/306 (46%), Gaps = 47/306 (15%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
SF+ LI+ KV D ++L +M++ P+ T+ LI L + K H L D
Sbjct: 277 SFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG--LFD 334
Query: 161 TLCKYGYVK---LAAEVFNGNKRHCRFN---------------PDVKMYTVLIYGWCKLG 202
+CK G + + + +G+ R+ + PD+ +Y L+ G+CK G
Sbjct: 335 EMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG 394
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR----KVSLHPEERFERT---------- 248
+ A++ ++ M+ RG+ P+ +TY L++G CR + +L + ++
Sbjct: 395 DLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFS 454
Query: 249 -----------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ 297
+ DA++ EM GI+PD ++++++ + + Q + M+
Sbjct: 455 ALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Query: 298 GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSA 357
G P+V TY ++ L G++++A+ L D M+ GV P +TYN + + + A+S+
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH--HRHANSS 572
Query: 358 LKLFKK 363
+ +K
Sbjct: 573 KRYIQK 578
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 12/300 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
++ L +C G + A+ +F PD YT +I G+C LGR + A + +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQ-EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
++ G P++ T +L+ G C + +I DA+ VF M+ G++ DV +++ +
Sbjct: 435 LKSGNPPSLTTSTILI-GACSRFG---------SISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+H Y + H+ + M+ GI P VATY +I + G +++A + E++R G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P + + + R D A L+ M D P T LL + KA +
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMA-DLRMKPDVVTCSALLHGYCKAQRMEKAI 603
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
++ + ++G+ PD+ LY LIHG C +AC+ M+++G LP + T L GL
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 158/370 (42%), Gaps = 32/370 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------RRLVSDTK 149
F +LID + R+ ++A +L ++DQ + P+ + L+ R V
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 150 TTSEHFTVLLDTL-----CKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
+ H + +L C GY E+ G K H PD+ +TV I CK G +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMK-HYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
+ A S L ++ GI + V+ + +++G C KV PEE A K+ R R
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFC-KVG-KPEE--------AIKLIHSFRLR-- 370
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
P++ +S L + F+ + E G+ P YT++I + GR + A
Sbjct: 371 -PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
F +++SG P T A +F+ MK +GL TY L+ +
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL-KLDVVTYNNLMHGY 488
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
K + V E+ +M+ +G+ PD+ Y +LIH + R EA + E+I +GF+P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 445 VTFETLYRGL 454
+ F + G
Sbjct: 549 LAFTDVIGGF 558
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T+L+ ++G + A VF N + DV Y L++G+ K ++ ++EM
Sbjct: 447 TILIGACSRFGSISDAESVFR-NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 216 ERGIEPNVVTYNVLLNG-VCRKVSLHPEERFERTIRDA--------DKVFDEMRERG--- 263
GI P+V TYN+L++ V R E IR V +RG
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565
Query: 264 -------------IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
++PDV + S +LH Y +A + + ++ F + + G+ P V Y ++I
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
S G +E A L MV+ G+ P T++ G++ +S
Sbjct: 626 HGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 671
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 12/300 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
++ L +C G + A+ +F PD YT +I G+C LGR + A + +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQ-EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
++ G P++ T +L+ G C + +I DA+ VF M+ G++ DV +++ +
Sbjct: 435 LKSGNPPSLTTSTILI-GACSRFG---------SISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+H Y + H+ + M+ GI P VATY +I + G +++A + E++R G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P + + + R D A L+ M D P T LL + KA +
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMA-DLRMKPDVVTCSALLHGYCKAQRMEKAI 603
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
++ + ++G+ PD+ LY LIHG C +AC+ M+++G LP + T L GL
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 158/370 (42%), Gaps = 32/370 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------RRLVSDTK 149
F +LID + R+ ++A +L ++DQ + P+ + L+ R V
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 150 TTSEHFTVLLDTL-----CKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
+ H + +L C GY E+ G K H PD+ +TV I CK G +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMK-HYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
+ A S L ++ GI + V+ + +++G C KV PEE A K+ R R
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFC-KVG-KPEE--------AIKLIHSFRLR-- 370
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
P++ +S L + F+ + E G+ P YT++I + GR + A
Sbjct: 371 -PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
F +++SG P T A +F+ MK +GL TY L+ +
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL-KLDVVTYNNLMHGY 488
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
K + V E+ +M+ +G+ PD+ Y +LIH + R EA + E+I +GF+P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 445 VTFETLYRGL 454
+ F + G
Sbjct: 549 LAFTDVIGGF 558
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T+L+ ++G + A VF N + DV Y L++G+ K ++ ++EM
Sbjct: 447 TILIGACSRFGSISDAESVFR-NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 216 ERGIEPNVVTYNVLLNG-VCRKVSLHPEERFERTIRDA--------DKVFDEMRERG--- 263
GI P+V TYN+L++ V R E IR V +RG
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQ 565
Query: 264 -------------IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
++PDV + S +LH Y +A + + ++ F + + G+ P V Y ++I
Sbjct: 566 EAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
S G +E A L MV+ G+ P T++ G++ +S
Sbjct: 626 HGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 671
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 158/340 (46%), Gaps = 30/340 (8%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
+S+HLL+ A+ ++ W+L+ EM Q TT+ F +L+
Sbjct: 150 NSYHLLMKIFAECGEYKAMWRLVDEMVQDGFP------------------TTARTFNLLI 191
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+ + G K A F +K + P Y ++ + + + + +M+E G
Sbjct: 192 CSCGEAGLAKQAVVQFMKSKTF-NYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF 250
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
P+V+TYN+LL R L +RF D++FDEM G PD +++I+LH+
Sbjct: 251 SPDVLTYNILLWTNYR---LGKMDRF-------DRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ +KP +L MKE GI P+V YT++I L+ G LE + DEMV++G P V
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
Y Y + D A ++F++M G P TY +++ A + ++
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQL-PNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
M+ G P+ +Y+ L+ L + K EA + EM++KG
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 11/303 (3%)
Query: 169 KLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNV 228
KLA F + F V Y +L+ + + G + ++EMV+ G T+N+
Sbjct: 130 KLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNL 189
Query: 229 LLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSL 288
L+ C + L + + F + + P S++ +L+ + +L
Sbjct: 190 LICS-CGEAGLAKQAVVQ---------FMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIE 239
Query: 289 DKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY 348
++ M E G P V TY ++ G+++ + LFDEM R G SP + TYN
Sbjct: 240 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 349 RGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD 408
+AL MKE G+ P+ Y L+ +A + K +M ++G PD
Sbjct: 300 GKGNKPLAALTTLNHMKEVGI-DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
Query: 409 LDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKK 468
+ YT++I G + +A + F EM KG LP T+ ++ RGL + R L K
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 418
Query: 469 KLD 471
+++
Sbjct: 419 EME 421
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 175/390 (44%), Gaps = 42/390 (10%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLI----------RRLVSDTKTTSEHF--------TVLL 159
AW++I +M + L+P+ T+ +L+ LV S F +V+L
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
LCK G + A +FN K +PD+ Y+++I+G CKLG+ + A +EM ++ I
Sbjct: 371 SGLCKTGRIDEALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
PN T+ LL G+C+K L +A + D + G D+ ++IV+ Y+
Sbjct: 430 LPNSRTHGALLLGLCQKGML----------LEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
++ + +L+ F+++ E GI P+VAT+ S+I + +A + D + G++P V
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF------------LKA 387
+Y Y + S +L ++MK +G+ PT TY V+ + L+
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGI-PPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 388 DMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
+ K+ RDM+ G+ PD Y +I LC K A F M + T+
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 448 ETLYRGLIQSDMLRTWRRLKKKLDEESISF 477
L L +R L E+++S
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSL 688
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 174/365 (47%), Gaps = 36/365 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S ++LI+ + V A +L ++M++ + P+ T+ +L ++ F +L
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL-----------AKGFHLL-- 305
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
G + A EV + +PDV YT+L+ G C+LG ++ L +M+ RG E
Sbjct: 306 -----GMISGAWEVIR-DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Query: 221 PN-VVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
N ++ +V+L+G+C+ I +A +F++M+ G+ PD+ ++SIV+H
Sbjct: 360 LNSIIPCSVMLSGLCKT----------GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ K ++L + M ++ I P T+ +++ L G L +A L D ++ SG + V
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
YN Y + AL+LFK + E G+ +P+ T+ L+ + K I ++I
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGI-TPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
+K G+ P + YT L+ + + EM +G P VT+ +++GL
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC---- 584
Query: 460 LRTWR 464
R W+
Sbjct: 585 -RGWK 588
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 13/313 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
F ++ CK G+V +A F + C P V + +LI G C +G + A ++M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLK-CGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+ G+EP+ VTYN+L G I A +V +M ++G+ PDV +++I+
Sbjct: 284 NKHGVEPDSVTYNILAKGF----------HLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGI-CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
L + + L + M +G ++ + ++ L GR+++A LF++M G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+SP V Y+ D AL L+ +M + + P + T+G LL + M+
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL-PNSRTHGALLLGLCQKGMLLEA 452
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ + + SG D+ LY ++I G + EA + F +IE G P TF +L G
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 454 LIQSDMLRTWRRL 466
++ + R++
Sbjct: 513 YCKTQNIAEARKI 525
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 57/330 (17%)
Query: 147 DTKTTSEH-FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
+ K +EH ++ ++D LC+ ++ A +F P V + ++ G+CKLG V+
Sbjct: 181 EIKDKNEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 239
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
A+SF +++ G+ P+V ++N+L+NG+C +I +A ++ +M + G+E
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLC----------LVGSIAEALELASDMNKHGVE 289
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
PD +++I+ + + + R M ++G+ P V TYT ++ G ++ L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 326 FDEMVRSG-----VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
+M+ G + PC+V + K R D AL LF +MK D
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGR----IDEALSLFNQMKAD------------- 392
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
G+ PDL Y+++IHGLC+ K+ A + EM +K
Sbjct: 393 -----------------------GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
LP T L GL Q ML R L L
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 160/372 (43%), Gaps = 45/372 (12%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
ALSLFN K+ P ++ ++I + K+ +FD+A L EM + + PN T L+
Sbjct: 382 ALSLFNQMKADGLSP-DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
L K LLD+L G D+ +Y ++I G+ K
Sbjct: 441 LGLCQ--KGMLLEARSLLDSLISSGE-----------------TLDIVLYNIVIDGYAKS 481
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G +E A ++E GI P+V T+N L+ G C+ + I +A K+ D ++
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKT----------QNIAEARKILDVIKL 531
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM-MKEQGICPTVATYTSVIKCLASCGRLE 320
G+ P V S++ ++ Y+ + S+D+ R MK +GI PT TY+ + K L + E
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTK-SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 321 DA-----EGLFD-------EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
+ E +F+ +M G+ P +TYN + K A + MK
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
L + +A TY +L+ I ++E V YT LI C + A
Sbjct: 651 LDASSA-TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 429 CQFFVEMIEKGF 440
+ F +++ +GF
Sbjct: 710 VKLFHQLLHRGF 721
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
PP +++ +I + +V+ A+ + M R+L + +T+
Sbjct: 617 PP-DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY----------------- 658
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+L+D+LC YGY++ A+ F + + + YT LI C G E A +++
Sbjct: 659 -NILIDSLCVYGYIR-KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 215 VERGIEPNVVTYNVLLNGVCRK 236
+ RG ++ Y+ ++N +CR+
Sbjct: 717 LHRGFNVSIRDYSAVINRLCRR 738
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 175/390 (44%), Gaps = 42/390 (10%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLI----------RRLVSDTKTTSEHF--------TVLL 159
AW++I +M + L+P+ T+ +L+ LV S F +V+L
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
LCK G + A +FN K +PD+ Y+++I+G CKLG+ + A +EM ++ I
Sbjct: 371 SGLCKTGRIDEALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
PN T+ LL G+C+K L +A + D + G D+ ++IV+ Y+
Sbjct: 430 LPNSRTHGALLLGLCQKGML----------LEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
++ + +L+ F+++ E GI P+VAT+ S+I + +A + D + G++P V
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF------------LKA 387
+Y Y + S +L ++MK +G+ PT TY V+ + L+
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGI-PPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 388 DMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
+ K+ RDM+ G+ PD Y +I LC K A F M + T+
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 448 ETLYRGLIQSDMLRTWRRLKKKLDEESISF 477
L L +R L E+++S
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSL 688
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 174/365 (47%), Gaps = 36/365 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S ++LI+ + V A +L ++M++ + P+ T+ +L ++ F +L
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL-----------AKGFHLL-- 305
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
G + A EV + +PDV YT+L+ G C+LG ++ L +M+ RG E
Sbjct: 306 -----GMISGAWEVIR-DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Query: 221 PN-VVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
N ++ +V+L+G+C+ I +A +F++M+ G+ PD+ ++SIV+H
Sbjct: 360 LNSIIPCSVMLSGLCKT----------GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ K ++L + M ++ I P T+ +++ L G L +A L D ++ SG + V
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
YN Y + AL+LFK + E G+ +P+ T+ L+ + K I ++I
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGI-TPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
+K G+ P + YT L+ + + EM +G P VT+ +++GL
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC---- 584
Query: 460 LRTWR 464
R W+
Sbjct: 585 -RGWK 588
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 13/313 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
F ++ CK G+V +A F + C P V + +LI G C +G + A ++M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLK-CGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+ G+EP+ VTYN+L G I A +V +M ++G+ PDV +++I+
Sbjct: 284 NKHGVEPDSVTYNILAKGF----------HLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGI-CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
L + + L + M +G ++ + ++ L GR+++A LF++M G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+SP V Y+ D AL L+ +M + + P + T+G LL + M+
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL-PNSRTHGALLLGLCQKGMLLEA 452
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ + + SG D+ LY ++I G + EA + F +IE G P TF +L G
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 454 LIQSDMLRTWRRL 466
++ + R++
Sbjct: 513 YCKTQNIAEARKI 525
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 153/351 (43%), Gaps = 57/351 (16%)
Query: 147 DTKTTSEH-FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
+ K +EH ++ ++D LC+ ++ A +F P V + ++ G+CKLG V+
Sbjct: 181 EIKDKNEHTYSTVVDGLCRQQKLE-DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 239
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
A+SF +++ G+ P+V ++N+L+NG+C +I +A ++ +M + G+E
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLC----------LVGSIAEALELASDMNKHGVE 289
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
PD +++I+ + + + R M ++G+ P V TYT ++ G ++ L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 326 FDEMVRSG-----VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
+M+ G + PC+V + K R D AL LF +MK D
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGR----IDEALSLFNQMKAD------------- 392
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
G+ PDL Y+++IHGLC+ K+ A + EM +K
Sbjct: 393 -----------------------GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYRR 491
LP T L GL Q ML R L L + N + Y +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 160/372 (43%), Gaps = 45/372 (12%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
ALSLFN K+ P ++ ++I + K+ +FD+A L EM + + PN T L+
Sbjct: 382 ALSLFNQMKADGLSP-DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
L K LLD+L G D+ +Y ++I G+ K
Sbjct: 441 LGLCQ--KGMLLEARSLLDSLISSGE-----------------TLDIVLYNIVIDGYAKS 481
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G +E A ++E GI P+V T+N L+ G C+ + I +A K+ D ++
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKT----------QNIAEARKILDVIKL 531
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM-MKEQGICPTVATYTSVIKCLASCGRLE 320
G+ P V S++ ++ Y+ + S+D+ R MK +GI PT TY+ + K L + E
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTK-SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 321 DA-----EGLFD-------EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
+ E +F+ +M G+ P +TYN + K A + MK
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
L + +A TY +L+ I ++E V YT LI C + A
Sbjct: 651 LDASSA-TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 429 CQFFVEMIEKGF 440
+ F +++ +GF
Sbjct: 710 VKLFHQLLHRGF 721
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
PP +++ +I + +V+ A+ + M R+L + +T+
Sbjct: 617 PP-DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY----------------- 658
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+L+D+LC YGY++ A+ F + + + YT LI C G E A +++
Sbjct: 659 -NILIDSLCVYGYIR-KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 215 VERGIEPNVVTYNVLLNGVCRK 236
+ RG ++ Y+ ++N +CR+
Sbjct: 717 LHRGFNVSIRDYSAVINRLCRR 738
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 172/388 (44%), Gaps = 30/388 (7%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS--------------- 146
F L+ID +++ DL WQ + E+ ++ + F VLI
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 147 --DTKTTSEHFTVLLDTLCKYG-YVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
D + + V+L + + + LA V+N C +P++ + +L+ G K GR
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYN-EMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
AQ ++M RGI PN VTY +L++G+C++ S DA K+F EM+ G
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD----------DARKLFYEMQTSG 263
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
PD + + +L + + + + + R+ ++ G + Y+S+I L R A
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
L+ M++ + P + Y + + ALKL M G+ SP + Y +++
Sbjct: 324 ELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI-SPDTYCYNAVIKA 382
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
++ + + +M E+ PD +T+LI +C REA + F E+ + G P
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPS 442
Query: 444 KVTFETLYRGLIQSDMLRTWRRLKKKLD 471
TF L GL +S L+ R L K++
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKME 470
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
D + VLI + K+G E A M E P+V TYNV+L + R EE F
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR------EEVF- 178
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
A V++EM + P++ +F I++ + + + F M +GI P TY
Sbjct: 179 --FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
T +I L G +DA LF EM SG P +V +N + A +L + ++
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
DG Y L+ +A E++ +M + + PD+ LYT+LI GL + K
Sbjct: 297 DGFV-LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
+A + M KG P + + + L +L R L+ ++ E
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 174/416 (41%), Gaps = 63/416 (15%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTK------- 149
L + LID + + R++ A++L M ++++ P+ + +LI+ L K
Sbjct: 301 LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKL 360
Query: 150 -TTSEHFTVLLDTLCKYGYVK-LAAEVFNGNKRHCRFN-------PDVKMYTVLIYGWCK 200
++ + DT C +K L R + PD +T+LI C+
Sbjct: 361 LSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCR 420
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR-------KVSLH------PEERFER 247
G V A+ E+ + G P+V T+N L++G+C+ ++ LH P F R
Sbjct: 421 NGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLR 480
Query: 248 TIRDADKVFDEMRERGI----------------EPDVTSFSIVLHVYSRAHKPQLSLDKF 291
++ FD M E G PD+ S++++++ + RA +L
Sbjct: 481 LSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 292 RMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF---DEMVRS-GVSPCAVTYNCFFKE 347
+++ +G+ P TY ++I L GR E+A LF D+ S V +T++C
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSC---- 596
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK---EIWRDMKESG 404
R RK A L+ K + C T + Q F + + ++ E+ E
Sbjct: 597 -RKRK-VLVAFNLWMKYLKKISCLDD-ETANEIEQCFKEGETERALRRLIELDTRKDELT 653
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
+GP YT+ + GLC+ ++ EA F + EK L + L GL + + L
Sbjct: 654 LGP----YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQL 705
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 171/381 (44%), Gaps = 31/381 (8%)
Query: 98 SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH--- 154
S ++ +LI + D A+ L EM R PN T+ VLI L D K +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 155 --------------FTVLLDTLCKYGYVKLAAEVFN-GNKRHCRFNPDVKMYTVLIYGWC 199
+ L++ CK G V A E+ KR C+ P+V+ + L+ G C
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK--PNVRTFNELMEGLC 417
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
++G+ A L M++ G+ P++V+YNVL++G+CR E + A K+ M
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR----------EGHMNTAYKLLSSM 467
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
IEPD +F+ +++ + + K ++ +M +GI T T++I + G+
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
DA + + +V+ + + N L + K+ + GL P+ TY
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL-VPSVVTYTT 586
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
L+ +++ I I MK SG P++ YT++I+GLC+ + EA + M + G
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 440 FLPQKVTFETLYRGLIQSDML 460
P VT+ + +G + + L
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKL 667
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 11/301 (3%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T LL C+ ++ A +VF+ + P+ Y++LI+G C++GR+E A ++M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
E+G +P+ TY VL+ +C + I A +FDEM RG +P+V ++++++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDR----------GLIDKAFNLFDEMIPRGCKPNVHTYTVLI 343
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
R K + + R M + I P+V TY ++I GR+ A L M +
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
P T+N + A+ L K+M ++GL SP +Y VL+ + + +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL-SPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
+ M + PD +T +I+ C++ K A F M+ KG +VT TL G+
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Query: 456 Q 456
+
Sbjct: 523 K 523
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 148/328 (45%), Gaps = 46/328 (14%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF----------------LVLIRRL 144
+++ LI+ K + A++L+T M++R+ PN TF + L++R+
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 145 VSDTKTTS-EHFTVLLDTLCKYGYVKLAAEVFNGNKRHC-RFNPDVKMYTVLIYGWCKLG 202
+ + + + VL+D LC+ G++ A ++ + +C PD +T +I +CK G
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS--SMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR----KVSLHPEERFERT---------- 248
+ + A +FL M+ +GI + VT L++GVC+ + +L E +
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 249 -----------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ 297
+++ + ++ + G+ P V +++ ++ R+ S +MK
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 298 GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSA 357
G P V YT +I L GR+E+AE L M SGVSP VTY K Y D A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 358 LKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
L+ + M E G Y LLQ F+
Sbjct: 671 LETVRAMVERGY-ELNDRIYSSLLQGFV 697
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 3/222 (1%)
Query: 256 FDEMRER-GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
FDE+RE G + +S +L ++ L+ +R M+ G + Y +++ L
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 315 SCGRLEDAEGLFDEMVRSG-VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPT 373
G E AE ++++ G V + + RG D ALK+F M ++ C+P
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD-ALKVFDVMSKEVTCAPN 265
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
+ +Y +L+ + + + M E G P YT+LI LC+R +A F
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD 325
Query: 434 EMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
EMI +G P T+ L GL + + + +K+ ++ I
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 172/384 (44%), Gaps = 49/384 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ LI+ K+ + D A +++ M + +P+ T+ +++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY------------------NIMIG 201
Query: 161 TLCKYGYVKLAAEVFNGN-KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+LC G + LA +V N +C+ P V YT+LI G V+ A ++EM+ RG+
Sbjct: 202 SLCSRGKLDLALKVLNQLLSDNCQ--PTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIR-------------------------DADK 254
+P++ TYN ++ G+C++ + R + + +K
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
+ +M +P+V ++SI++ R K + +++ ++MKE+G+ P +Y +I
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
GRL+ A + M+ G P V YN AD AL++F K+ E G CSP +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG-CSPNS 438
Query: 375 HTYGVLLQ-MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
+Y + ++ D I + I +M +G+ PD Y +I LC EA + V
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 434 EMIEKGFLPQKVTFETLYRGLIQS 457
+M F P VT+ + G ++
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKA 521
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 154/355 (43%), Gaps = 32/355 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +LI+ D A +L+ EM R L P+ T+ +IR
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR------------------ 271
Query: 161 TLCKYGYVKLAAE-VFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+CK G V A E V N + C PDV Y +L+ G+ E + + +M
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCE--PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
+PNVVTY++L+ +CR + I +A + M+E+G+ PD S+ ++ +
Sbjct: 330 DPNVVTYSILITTLCR----------DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
R + ++++ M G P + Y +V+ L G+ + A +F ++ G SP +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
+YN F D AL + +M +G+ P TY ++ + M+ E+ D
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGI-DPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
M+ P + Y +++ G C+ + +A M+ G P + T+ L G+
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 31/324 (9%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH----- 240
PDV Y LI G+CK+ R++ A L+ M + P+ VTYN+++ +C + L
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 241 --------------------PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
E + +A K+ DEM RG++PD+ +++ ++ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + R ++ +G P V +Y +++ L + G+ E+ E L +M P VT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y+ + A+ L K MKE GL +P A++Y L+ F + + V E M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGL-TPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS-DM 459
G PD+ Y ++ LC+ K +A + F ++ E G P ++ T++ L S D
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 460 LRT----WRRLKKKLDEESISFGS 479
+R + +D + I++ S
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNS 478
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 47/293 (16%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
+NPDV + T LI G+ L + A + E++E+ +P+V YN L+NG C+
Sbjct: 120 YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKM------- 171
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
I DA +V D MR + PD
Sbjct: 172 ---NRIDDATRVLDRMRSKDFSPDT----------------------------------- 193
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
TY +I L S G+L+ A + ++++ P +TY + D ALKL +
Sbjct: 194 VTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE 253
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
M GL P TY +++ K M+ E+ R+++ G PD+ Y +L+ L +
Sbjct: 254 MLSRGL-KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
KW E + +M + P VT+ L L + + L K + E+ ++
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----------------RRL 144
++ +LI T+ + + + A L+ M ++ LTP+ ++ LI +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 145 VSDTKTTS-EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+SD ++ +L TLCK G A E+F G +P+ Y + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIF-GKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
A + EM+ GI+P+ +TYN +++ +CR E + +A ++ +MR
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCR----------EGMVDEAFELLVDMRSCE 503
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
P V +++IVL + +AH+ + +++ M G P TYT +I+ + G +A
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 324 GLFDEMVR 331
L +++VR
Sbjct: 564 ELANDLVR 571
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 166/373 (44%), Gaps = 41/373 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +ID K A+ L E+ L PN F L+D
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF------------------GTLVD 312
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
CK + A +F + +P++ +Y LI+G CK G + A L+EM +
Sbjct: 313 GFCKARELVTARSLFVHMVKF-GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+V TY +L+NG+C E + +A+++F +M+ I P +++ ++H Y +
Sbjct: 372 PDVFTYTILINGLC----------IEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + +LD M G+ P + T++++I + ++ A GL+ EM G+ P VT
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y + + AL+L+ M E G+ P HT+ L+ F K + V + +++
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGI-HPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG------- 453
+ + +T LI GLC+ A +FF +M G P ++ ++ +G
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600
Query: 454 ----LIQSDMLRT 462
++Q DM++T
Sbjct: 601 TDTMMLQCDMIKT 613
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 157/371 (42%), Gaps = 30/371 (8%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCK 164
+++ + + R+FD W M R L P+ + VL + + + LLD +
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKE--KLLDEMTS 227
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
G P+V +YT+ I C+ ++E A+ M + G+ PN+
Sbjct: 228 LG-----------------IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
TY+ +++G C+ +R A ++ E+ + P+V F ++ + +A +
Sbjct: 271 TYSAMIDGYCKT----------GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
+ F M + G+ P + Y +I G + +A GL EM +SP TY
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 345 FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
A +LF+KMK + + P++ TY L+ + K + ++ +M SG
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERI-FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
V P++ ++ LI G C + + A + EM KG +P VT+ L + ++
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 465 RLKKKLDEESI 475
RL + E I
Sbjct: 500 RLYSDMLEAGI 510
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 157/392 (40%), Gaps = 54/392 (13%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQR----SLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
SF +I + ++ LA LI + +R S N S L + K + F+
Sbjct: 77 SFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFS 136
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
+L+ + G + A V R + +PD K ++ G + R ++ M+
Sbjct: 137 LLIMEFLEMGLFEEALWV----SREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMIS 192
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
RG+ P+V Y VL C K L+ ++ +K+ DEM GI+P+V ++I +
Sbjct: 193 RGLVPDVHIYFVLFQ-CCFKQGLYSKK---------EKLLDEMTSLGIKPNVYIYTIYIL 242
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE-------- 328
R +K + + F +MK+ G+ P + TY+++I G + A GL+ E
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 329 ---------------------------MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
MV+ GV P YNC + + A+ L
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
+M+ L SP TY +L+ D + +++ MK + P Y LIHG C+
Sbjct: 363 SEMESLNL-SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+A EM G P +TF TL G
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 132/308 (42%), Gaps = 26/308 (8%)
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFER 247
+ ++++LI + ++G E A EM P+ +LNG+ R+ RF+
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRR------RRFDS 182
Query: 248 TIRDADKVFDEMRERGIEPDVTSFSIVLH------VYSRAHKPQLSLDKFRMMKEQGICP 301
D + M RG+ PDV + ++ +YS+ K LD+ M GI P
Sbjct: 183 VWVD----YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL---LDE---MTSLGIKP 232
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V YT I L ++E+AE +F+ M + GV P TY+ Y + A L+
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
K++ L P +G L+ F KA + + ++ M + GV P+L +Y LIHG C+
Sbjct: 293 KEILVAELL-PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEF 481
EA EM P T+ L GL D + RL +K+ E I S
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 482 QNYQLKPY 489
N + Y
Sbjct: 412 YNSLIHGY 419
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 188/448 (41%), Gaps = 71/448 (15%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTP-------- 132
AL LF S P P S F L+ +AK+ ++D+ L +M + P
Sbjct: 67 ALDLFTRMVHSRPLP--SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 133 -----------NPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
S FL + +L + + FT LL+ C + ++ A +F+
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVT--FTSLLNGYCHWNRIEDAIALFD-QILG 181
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
F P+V YT LI CK + A N+M G PNVVTYN L+ G+C
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEI----- 236
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
R+ DA + +M +R IEP+V +F+ ++ + + K + + + +M + + P
Sbjct: 237 -GRWG----DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V TY S+I L G L++A +F M R+G P V Y + K + +K+F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD------------- 408
+M + G+ + T TY VL+Q + V +E++ M PD
Sbjct: 352 YEMSQKGVVANTI-TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 409 ------------------LDL----YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+D+ YT++I G+C+ K +A F + KG P +T
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEES 474
+ T+ G + ++ L KK+ E+
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 31/310 (10%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKV-RQFDLAWQLITEMDQRSLTPNPST 136
H A+ LFN + + P + +++ L+ + ++ R D AW L+ +M +R + PN T
Sbjct: 203 HLNHAVELFNQMGTNGSRP-NVVTYNALVTGLCEIGRWGDAAW-LLRDMMKRRIEPNVIT 260
Query: 137 FLVLIRRLVSDTKT--TSEHFTV---------------LLDTLCKYGYVKLAAEVFNGNK 179
F LI V K E + V L++ LC YG + A ++F +
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 180 RHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSL 239
R+ + P+ +YT LI+G+CK RVE EM ++G+ N +TY VL+ G C +
Sbjct: 321 RNGCY-PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC--LVG 377
Query: 240 HPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
P+ A +VF++M R PD+ +++++L K + +L F M+++ +
Sbjct: 378 RPDV--------AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
+ TYT +I+ + G++EDA LF + G+ P +TY + R A
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 360 LFKKMKEDGL 369
LFKKMKEDG
Sbjct: 490 LFKKMKEDGF 499
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 166/374 (44%), Gaps = 33/374 (8%)
Query: 77 HHSKI--ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNP 134
H ++I A++LF+ + P + ++ LI + K R + A +L +M PN
Sbjct: 165 HWNRIEDAIALFDQILGMGFKP-NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 135 STFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL 194
T+ L+ LC+ G AA + + R P+V +T L
Sbjct: 224 VTY------------------NALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTAL 264
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I + K+G++ A+ N M++ + P+V TY L+NG+C + +A +
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC----------MYGLLDEARQ 314
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
+F M G P+ ++ ++H + ++ + + + F M ++G+ TYT +I+
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
GR + A+ +F++M P TYN + AL +F+ M++ +
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM-DINI 433
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
TY +++Q K + +++ + G+ P++ YT +I G C R EA F +
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 435 MIEKGFLPQKVTFE 448
M E GFLP + ++
Sbjct: 494 MKEDGFLPNESVYK 507
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 20/313 (6%)
Query: 181 HCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH 240
H R P + +T L+ K+ R + S +M GI P + T N++++ VC +S
Sbjct: 76 HSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC--LSSQ 133
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
P A +M + G EPD+ +F+ +L+ Y ++ + ++ F + G
Sbjct: 134 PCR--------ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY--RGRKDADSAL 358
P V TYT++I+CL L A LF++M +G P VTYN GR D+A
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW-GDAAW 244
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
L MK P T+ L+ F+K + KE++ M + V PD+ Y LI+G
Sbjct: 245 LLRDMMKRR--IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEE 473
LC EA Q F M G P +V + TL G +S D ++ + + +K +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 474 SISFGSEFQNYQL 486
+I++ Q Y L
Sbjct: 363 TITYTVLIQGYCL 375
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 190/454 (41%), Gaps = 83/454 (18%)
Query: 82 ALSLF-NYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A SLF +S P P + F ++ +AK+ +FD+ L +M+ ++ + +F
Sbjct: 63 AFSLFCEMLQSRPIPSIV--DFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF--- 117
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
T+L+ C+ A G F P + L+ G+C+
Sbjct: 118 ---------------TILIHCFCRC-SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ 161
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE-ERF----ERTIR----- 250
R + A S ++ M G PNVV YN ++NG+C+ L+ E F ++ IR
Sbjct: 162 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 251 ---------------DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
DA ++ +M +R I+P+V F+ ++ + + + + ++ M
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
+ + P V TY S+I G L DA+ +FD MV G P VTYN + K +
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL------ 409
+KLF +M GL A TY L+ + +A + V ++++ M + GV PD+
Sbjct: 342 DGMKLFCEMTYQGLVGD-AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 410 ------------------DL-----------YTLLIHGLCERKKWREACQFFVEMIEKGF 440
DL Y ++I GLC K +EA F + KG
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
P + + T+ GL + + R +L +++ E+
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 35/368 (9%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD----------------- 147
L++ + +F A L+ MD PN + +I L +
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 148 TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
+ + + L+ L G AA + + + +P+V +T LI + K G + A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
++ EM+ R + PNV TYN L+NG C + DA +FD M +G PD
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFC----------IHGCLGDAKYMFDLMVSKGCFPD 323
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
V +++ ++ + ++ + + + F M QG+ TY ++I G+L A+ +F+
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
MV GVSP VTYN + AL + + +++ + TY +++Q +
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM-DVDIITYNIIIQGLCRT 442
Query: 388 DMIGVVKEIW---RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
D + KE W R + GV PD Y +I GLC + REA + M E GF+P +
Sbjct: 443 DKL---KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 445 VTFETLYR 452
++ R
Sbjct: 500 RIYDETLR 507
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 30/363 (8%)
Query: 114 QFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAE 173
+FD A+ L EM Q P PS FT +L + K +
Sbjct: 59 KFDDAFSLFCEMLQSR--PIPSIV----------------DFTRVLTVIAKMNKFDIVIY 100
Query: 174 VFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV 233
+++ + + D+ +T+LI+ +C+ R+ A + L +M++ G P++VT LLNG
Sbjct: 101 LYH-KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF 159
Query: 234 CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM 293
C+ RF+ +A + D M G P+V ++ V++ + +L+ F
Sbjct: 160 CQG------NRFQ----EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYC 209
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
M+++GI TY ++I L++ GR DA L +MV+ + P + + + +
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 354 ADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYT 413
A L+K+M + P TY L+ F +G K ++ M G PD+ Y
Sbjct: 270 LLEARNLYKEMIRRSV-VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 414 LLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 473
LI G C+ K+ + + F EM +G + T+ TL G Q+ L +++ ++ +
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 474 SIS 476
+S
Sbjct: 389 GVS 391
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 39/201 (19%)
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL------ 369
C + +DA LF EM++S P V + D + L+ KM+ G+
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 370 ----------CS------------------PTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
CS P+ T G LL F + + + M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS---- 457
G P++ +Y +I+GLC+ + A + F M +KG VT+ TL GL S
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 458 DMLRTWRRL-KKKLDEESISF 477
D R R + K+K+D I F
Sbjct: 237 DAARLLRDMVKRKIDPNVIFF 257
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 14/336 (4%)
Query: 157 VLLDTLCKYGYVKLAAEVFNGN-KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
+L+ +C G V++ ++ G + C P++ Y +I G+CKLG +E A E+
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCI--PNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
+G P + T+ ++NG C+ E +D++ E++ERG+ V + ++
Sbjct: 268 LKGFMPTLETFGTMINGFCK----------EGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
R + + P VATY +I L G+ E A G DE + G+
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
P ++Y + Y K+ D A KL +M E G C P TYG+L+ + + +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG-CKPDIVTYGILIHGLVVSGHMDDAVN 436
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
+ + + GV PD +Y +L+ GLC+ ++ A F EM+++ LP + TL G I
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 456 QSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYRR 491
+S R++ E+ + N +K + R
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 159/397 (40%), Gaps = 42/397 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD------------- 147
S+ LI K +++D+A +L+ +M +R P+ T+ +LI LV
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 148 ----TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ + +L+ LCK G L A++ PD +Y LI G+ + G
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRF-LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A+ + VE+G++ +VV +N ++ G CR L +A + M E
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD----------EALACMNRMNEEH 550
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+ PD ++S ++ Y + ++ FR M++ P V TYTS+I G + AE
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
F EM + P VTY + + ++ C P T+ LLQ
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Query: 384 FLKADMIGVV--------------KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
F+K V+ E + MK G Y + LC + AC
Sbjct: 671 FVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC 730
Query: 430 QFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
F +M++KGF P V+F + G + WR +
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 168/359 (46%), Gaps = 33/359 (9%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
+++++LI+ + K + ++A + E ++ L PN ++ LI+
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQ----------------- 388
Query: 160 DTLCKYGYVKLAAEVF-NGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG 218
CK +A+++ +R C+ PD+ Y +LI+G G ++ A + ++++RG
Sbjct: 389 -AYCKSKEYDIASKLLLQMAERGCK--PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
+ P+ YN+L++G+C+ P A +F EM +R I PD ++ ++ +
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLP----------AKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
R+ + F + E+G+ V + ++IK G L++A + M + P
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
TY+ Y ++D +A+K+F+ M E C P TY L+ F + +E ++
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYM-EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE-MIEKGFLPQKVTFETLYRGLIQ 456
+M+ + P++ YT LI L + E ++ E M+ +P +VTF L +G ++
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 183/444 (41%), Gaps = 68/444 (15%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+ +++Y L + + + L+ + K R+ A ++ EM R + + + +L+
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212
Query: 142 RRLVSDTKTTSEH-----------------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
+ + ++ K + ++ CK G ++ A VF K F
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK-GF 271
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI------------------------- 219
P ++ + +I G+CK G + L+E+ ERG+
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 220 ----------EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVT 269
+P+V TYN+L+N +C+ E A DE ++G+ P+
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCK----------EGKKEVAVGFLDEASKKGLIPNNL 381
Query: 270 SFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
S++ ++ Y ++ + ++ M E+G P + TY +I L G ++DA + ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 330 VRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADM 389
+ GVSP A YN A LF +M + + P A+ Y L+ F+++
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL-PDAYVYATLIDGFIRSGD 500
Query: 390 IGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
++++ E GV D+ + +I G C EA M E+ +P K T+ T
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560
Query: 450 LYRGLI-QSDM---LRTWRRLKKK 469
+ G + Q DM ++ +R ++K
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKN 584
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 138/338 (40%), Gaps = 13/338 (3%)
Query: 147 DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVET 206
+ K T E + +L + G + A E+++ PDV L+ K R+
Sbjct: 129 NVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGD 188
Query: 207 AQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
A+ +EM +RG + + +L+ G+C E + K+ + +G P
Sbjct: 189 ARKVYDEMCDRGDSVDNYSTCILVKGMCN----------EGKVEVGRKLIEGRWGKGCIP 238
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
++ ++ ++ Y + + + F+ +K +G PT+ T+ ++I G ++ L
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 327 DEMVRSGVSPCAVTYNCFF-KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
E+ G+ N +YR D A + + D C P TY +L+
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND--CKPDVATYNILINRLC 356
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
K V + + G+ P+ Y LI C+ K++ A + ++M E+G P V
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Query: 446 TFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQN 483
T+ L GL+ S + +K KL + +S + N
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 178/406 (43%), Gaps = 67/406 (16%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL-----VSDTK----TT 151
SF+ LI+ K FD AW + EM + P ST+ + I L + D + +
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 152 SEHFTVLLDTLCKYGYVKLA----AEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
+ V +TL +GY+K+ A + + R +P + Y LI G C+ G +E A
Sbjct: 370 AAPDVVSYNTLM-HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGA 428
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
Q EM + I P+V+TY L+ G + +L A +V+DEM +GI+PD
Sbjct: 429 QRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM----------ATEVYDEMLRKGIKPD 478
Query: 268 VTSFS---------------IVLH---VYSRAHKPQLSLDKFRM---------------- 293
+++ LH V + H P L++ R+
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQ 538
Query: 294 --MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGR 351
+ G+ P TYT+VI+ G+ + A L+DEM+R + P +TY +
Sbjct: 539 RKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKA 598
Query: 352 KDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR---DMKESGVGPD 408
+ A + +MK+ G+ P T+ LL KA G + E +R M+E G+ P+
Sbjct: 599 GRLEQAFQYSTEMKKRGV-RPNVMTHNALLYGMCKA---GNIDEAYRYLCKMEEEGIPPN 654
Query: 409 LDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
YT+LI C+ +KW E + + EM++K P T L++ L
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 162/374 (43%), Gaps = 41/374 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+F+ ++D+ K + ++ EM +R++ + T+ +LI + K
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEE-------- 291
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
A F+G+ R F + LI G+CK G + A +EM+ GI
Sbjct: 292 -----------ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIY 340
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P TYN+ + +C F R I DA ++ M PDV S++ ++H Y +
Sbjct: 341 PTTSTYNIYICALC---------DFGR-IDDARELLSSM----AAPDVVSYNTLMHGYIK 386
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
K + F ++ I P++ TY ++I L G LE A+ L +EM + P +T
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y K + + A +++ +M G+ P + Y L+ +G + +R
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGI-KPDGYAYTTRAVGELR---LGDSDKAFRLH 502
Query: 401 KESGV----GPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+E PDL +Y + I GLC+ +A +F ++ G +P VT+ T+ RG ++
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 457 SDMLRTWRRLKKKL 470
+ + R L ++
Sbjct: 563 NGQFKMARNLYDEM 576
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 207 AQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
A + M+E GI P V+T+N +L+ + L ER DK++ EM+ R IE
Sbjct: 222 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL------ERV----DKIWLEMKRRNIEF 271
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
+++I+++ +S+ K + + M+ G T ++ +I+ G +DA G+
Sbjct: 272 SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVT 331
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
DEM+ +G+ P TYN + D A +L M +P +Y L+ ++K
Sbjct: 332 DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-----AAPDVVSYNTLMHGYIK 386
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
++ D++ + P + Y LI GLCE A + EM + P +T
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 447 FETLYRGLIQSDML 460
+ TL +G +++ L
Sbjct: 447 YTTLVKGFVKNGNL 460
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 20/273 (7%)
Query: 207 AQSFL---NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
A+ FL +M+ +G P+V N++L + R R + A V++ M E G
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVL----------RDSRMMNKASAVYETMIEHG 233
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRM-MKEQGICPTVATYTSVIKCLASCGRLEDA 322
I P V +F+ +L +A + +DK + MK + I + TY +I + G++E+A
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLE-RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+M RSG + ++N + Y + D A + +M G+ PT TY + +
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI-YPTTSTYNIYIC 351
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
I +E+ M PD+ Y L+HG + K+ EA F ++ P
Sbjct: 352 ALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP 407
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
VT+ TL GL +S L +RLK+++ + I
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 135/272 (49%), Gaps = 11/272 (4%)
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
KR F D YT ++ + + L+EMV G +PN VTYN L++ R
Sbjct: 350 KRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRA-- 407
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
+++A VF++M+E G EPD ++ ++ ++++A +++D ++ M+E G
Sbjct: 408 --------NYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+ P TY+ +I CL G L A LF EMV G +P VT+N + ++ ++AL
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
KL++ M+ G P TY +++++ + + ++ +M+ PD +Y LL+
Sbjct: 520 KLYRDMQNAGF-QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ +A Q++ M++ G P T +L
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSL 610
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 157/367 (42%), Gaps = 31/367 (8%)
Query: 50 HAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTM 109
HA E +L G +++ AL F + K P ++ ++ +
Sbjct: 311 HAAEEALHNFGFRMDAYQANQVLKQMDNYAN-ALGFFYWLKRQPGFKHDGHTYTTMVGNL 369
Query: 110 AKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVK 169
+ +QF +L+ EM + PN T+ LI + + Y+K
Sbjct: 370 GRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIH------------------SYGRANYLK 411
Query: 170 LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVL 229
A VFN + PD Y LI K G ++ A M E G+ P+ TY+V+
Sbjct: 412 EAMNVFN-QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 230 LNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
+N C + H + A ++F EM +G P++ +F+I++ ++++A + +L
Sbjct: 471 IN--CLGKAGH--------LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
+R M+ G P TY+ V++ L CG LE+AEG+F EM R P Y +
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
+ D A + ++ M + GL P T LL FL+ + + + M G+ P L
Sbjct: 581 KAGNVDKAWQWYQAMLQAGL-RPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSL 639
Query: 410 DLYTLLI 416
YTLL+
Sbjct: 640 QTYTLLL 646
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 172/388 (44%), Gaps = 50/388 (12%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------- 154
F+ LI + F + +L M Q ++P+ TF L+ L+ +T H
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNK-RHCRFNPDVKMYTVLIYGWCKLG 202
F L++ CK V A +F + HC NPDV Y +I G C+ G
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC--NPDVVTYNTIIDGLCRAG 258
Query: 203 RVETAQSFLNEMVERG--IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
+V+ A + L+ M+++ + PNVV+Y L+ G C K + I +A VF +M
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK----------QEIDEAVLVFHDML 308
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG------ICPTVATYTSVIKCLA 314
RG++P+ +++ ++ S AH+ D+ + + G P T+ +IK
Sbjct: 309 SRGLKPNAVTYNTLIKGLSEAHR----YDEIKDILIGGNDAFTTFAPDACTFNILIKAHC 364
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL----- 369
G L+ A +F EM+ + P + +Y+ + R + D A LF ++ E +
Sbjct: 365 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD 424
Query: 370 -CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
C P A Y + + ++++R + + GV D Y LI G C K++ A
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPA 483
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+ V M+ + F+P T+E L GL++
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLK 511
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 271 FSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMV 330
F+ ++ Y A Q S+ F+ MK+ GI P+V T+ S++ L GR A LFDEM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 331 RS-GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADM 389
R+ GV+P + T+N + D A ++FK M E C+P TY ++ +A
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM-ELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 390 IGVVKEIWRDM--KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
+ + + M K + V P++ YT L+ G C +++ EA F +M+ +G P VT+
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 448 ETLYRGLIQS 457
TL +GL ++
Sbjct: 320 NTLIKGLSEA 329
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 166/416 (39%), Gaps = 68/416 (16%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQR-SLTPNPSTFLVL 140
++ LF K + P S +F+ L+ + K + +A L EM + +TP+ TF L
Sbjct: 157 SVKLFQTMKQMGISP-SVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 141 IRRLVSDTKTTSEH-----------------FTVLLDTLCKYGYVKLAAEVFNGN-KRHC 182
I ++ + ++D LC+ G VK+A V +G K+
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+P+V YT L+ G+C ++ A ++M+ RG++PN VTYN L+ G+ H
Sbjct: 276 DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA---HRY 332
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
+ + + + F PD +F+I++ + A ++ F+ M + P
Sbjct: 333 DEIKDILIGGNDAFTT-----FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGV-------SPCAVTYNCFFKEYRGRKDAD 355
A+Y+ +I+ L + AE LF+E+ V P A YN F+
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTK 447
Query: 356 SALKLFKKMKEDGLCSP-------TAH--------------------------TYGVLLQ 382
A K+F+++ + G+ P T H TY +L+
Sbjct: 448 QAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLID 507
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
LK + + + M S P + ++ L +RK E+ M+EK
Sbjct: 508 GLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 131/297 (44%), Gaps = 16/297 (5%)
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT 248
+ + LI + G + + M + GI P+V+T+N LL+ + ++ RT
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR---------GRT 189
Query: 249 IRDADKVFDEMRER-GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
D +FDEMR G+ PD +F+ +++ + + + F+ M+ P V TY
Sbjct: 190 GMAHD-LFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYN 248
Query: 308 SVIKCLASCGRLEDAEGLFDEMVR--SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
++I L G+++ A + M++ + V P V+Y + Y +++ D A+ +F M
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDML 308
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES--GVGPDLDLYTLLIHGLCERK 423
GL P A TY L++ +A +K+I ++ PD + +LI C+
Sbjct: 309 SRGL-KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSE 480
A + F EM+ P ++ L R L + L +L E+ + G +
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD 424
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 26/254 (10%)
Query: 240 HPEERFERTI-----------RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSL 288
HP + RT D + FD + +G SF ++L RA ++
Sbjct: 61 HPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVAR 120
Query: 289 D-KFRMMKEQGICPTVAT--YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFF 345
+ F + + C + + S+I+ + G +++ LF M + G+SP +T+N
Sbjct: 121 NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180
Query: 346 KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
R A LF +M+ +P ++T+ L+ F K M+ I++DM+
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240
Query: 406 GPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG--FLPQKVTFETLYRGLIQSDMLRTW 463
PD+ Y +I GLC K + A M++K P V++ TL RG
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC-------- 292
Query: 464 RRLKKKLDEESISF 477
+K+++DE + F
Sbjct: 293 --MKQEIDEAVLVF 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 156/384 (40%), Gaps = 50/384 (13%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV--------------- 145
S+ L+ ++ D A + +M R L PN T+ LI+ L
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342
Query: 146 SDTKTT----SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+D TT + F +L+ C G++ A +VF + + +PD Y+VLI C
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ-EMLNMKLHPDSASYSVLIRTLCMR 401
Query: 202 GRVETAQSFLNEMVERGI-------EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
+ A++ NE+ E+ + +P YN + +C + A+K
Sbjct: 402 NEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN----------GKTKQAEK 451
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
VF ++ +RG++ D S+ ++ + R K + + + +M + P + TY +I L
Sbjct: 452 VFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLL 510
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G A M+RS P A T++ E RK A+ + L M E +
Sbjct: 511 KIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNID 570
Query: 375 HTYGVLLQMFLKADMIGVVKE----IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
+ V+ +F A KE I R + ++G ++ L+ LCE +K +A
Sbjct: 571 LSTQVVRLLFSSAQ-----KEKAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHT 622
Query: 431 FFVEMIEKGFLPQKVTFETLYRGL 454
+ +EK + T T+ GL
Sbjct: 623 LVLFCLEKSQMVDIDTCNTVIEGL 646
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 137/364 (37%), Gaps = 77/364 (21%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV--------------- 145
+F++LI D A ++ EM L P+ +++ VLIR L
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 146 ---------SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIY 196
+ K + + + + LC G K A +VF + R D Y LI
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK--RGVQDPPSYKTLIT 472
Query: 197 GWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR-KVSLHPEERFERTIRDADKV 255
G C+ G+ + A L M+ R P++ TY +L++G+ + +L + +R +R +
Sbjct: 473 GHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS--- 529
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
P T+F VL ++ S +M E+ I + T V++ L S
Sbjct: 530 --------YLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFS 581
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH 375
+ E A + + +G Y +E G + L AH
Sbjct: 582 SAQKEKAFLIVRLLYDNG-------YLVKMEELLGYLCENRKL-------------LDAH 621
Query: 376 TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM 435
T ++L K+ M+ D+D +I GLC+ K+ EA + E+
Sbjct: 622 T--LVLFCLEKSQMV-----------------DIDTCNTVIEGLCKHKRHSEAFSLYNEL 662
Query: 436 IEKG 439
+E G
Sbjct: 663 VELG 666
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 157/341 (46%), Gaps = 29/341 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ +I K Q A + + +M+ R + T++ +I+ +D+ S
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS-------- 310
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C Y ++ +++ + P ++++I G CK G++ + M+ +G +
Sbjct: 311 --CVALYQEM-------DEKGIQVPPHA--FSLVIGGLCKEGKLNEGYTVFENMIRKGSK 359
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNV Y VL++G + S + DA ++ M + G +PDV ++S+V++ +
Sbjct: 360 PNVAIYTVLIDGYAKSGS----------VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + +LD F + G+ Y+S+I L GR+++AE LF+EM G + +
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN + + D A+ LFK+M+E+ C T +TY +LL K ++W M
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
+ G+ P + L GLC K AC+ E+ G +
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 11/308 (3%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
F V LI + KLG VE +M E GIEP + TYN L+NG+ + + E
Sbjct: 183 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
R VF+ M I+PD+ +++ ++ Y +A + Q +++K R M+ +G
Sbjct: 243 R----------VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADK 292
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
TY ++I+ + L+ EM G+ ++ + +F+
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN 352
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
M G P Y VL+ + K+ + + M + G PD+ Y+++++GLC+
Sbjct: 353 MIRKG-SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQN 483
+ EA +F G + + +L GL ++ + RL +++ E+ + S N
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 484 YQLKPYRR 491
+ + +
Sbjct: 472 ALIDAFTK 479
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 104/246 (42%), Gaps = 25/246 (10%)
Query: 230 LNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
L+G CRK + F + +D E+RE+ PD+ + +SR
Sbjct: 103 LDGFCRKFLIKLSPNFVSFVLKSD----EIREK---PDI---AWSFFCWSR--------- 143
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
K++ + Y S++ LA ++ + E+ + N K +
Sbjct: 144 -----KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFG 198
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
+ L +++KMKE+G+ PT +TY L+ + A + + ++ M+ + PD+
Sbjct: 199 KLGMVEELLWVWRKMKENGI-EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 410 DLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKK 469
Y +I G C+ + ++A + +M +G K+T+ T+ + + L ++
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 470 LDEESI 475
+DE+ I
Sbjct: 318 MDEKGI 323
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 29/357 (8%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE-----------------HFTVLLD 160
A L+ +M + P+ TF LI L K + + +++
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LCK G LA + N + +V +Y+ +I CK + A + EM +G+
Sbjct: 227 GLCKRGDTDLALNLLN-KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNV+TY+ L++ +C + R DA ++ +M ER I P++ +FS ++ + +
Sbjct: 286 PNVITYSSLISCLCN---------YGRW-SDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
K + + M ++ I P + TY+S+I RL +A+ + + M+R P VT
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN + K D ++LF++M + GL T TY L+ F +A + +++ M
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
GV P++ Y +L+ GLC+ K +A F + P T+ + G+ ++
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 30/333 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +++ + K DLA L+ +M+ + N V+I ++ ++D
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN-----VVI-------------YSTVID 261
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
+LCKY + A +F + P+V Y+ LI C GR A L++M+ER I
Sbjct: 262 SLCKYRHEDDALNLFT-EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+VT++ L++ +K L A+K+++EM +R I+P++ ++S +++ +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVK----------AEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + +M + P V TY ++I R++ LF EM + G+ VT
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y + +D D+A +FK+M G+ P TY +LL K + ++ +
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGV-HPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
+ S + PD+ Y ++I G+C+ KW+ +FV
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFV 522
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 182/434 (41%), Gaps = 71/434 (16%)
Query: 82 ALSLFNY-AKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+ LF A+S P P + F L+ +AK+ +FDL +M+ ++ N T+ +L
Sbjct: 62 AIGLFGVMAQSRPFPSIIE--FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 141 I-----------------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
I + + + LL+ C + A + +
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD-QMVEMG 178
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
+ PD +T LI+G + A + ++ MV+RG +P++VTY ++NG+C++
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR------- 231
Query: 244 RFERTIRDAD---KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
D D + ++M IE +V +S V+ + +L+ F M+ +G+
Sbjct: 232 ------GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
P V TY+S+I CL + GR DA L +M+ ++P VT++ + + A KL
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 361 FKKMKEDGL----------------------------------CSPTAHTYGVLLQMFLK 386
+++M + + C P TY L+ F K
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
A + E++R+M + G+ + YT LIHG + + A F +M+ G P +T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 447 FETLYRGLIQSDML 460
+ L GL ++ L
Sbjct: 466 YNILLDGLCKNGKL 479
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 11/290 (3%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P + ++ L+ K+ + + SF +M GI N+ TYN+L+N CR L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
+M + G EPD+ + + +L+ + ++ ++ M E G P T
Sbjct: 136 L----------GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVT 185
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
+T++I L + +A L D MV+ G P VTY R D D AL L KM
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM- 244
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
E Y ++ K ++ +M+ GV P++ Y+ LI LC +W
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
+A + +MIE+ P VTF L ++ L +L +++ + SI
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 11/256 (4%)
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+++ ++ LL+ + + +F+ I +K M GI ++ +++I+++ + R
Sbjct: 76 PSIIEFSKLLSAIAKM------NKFDLVISFGEK----MEILGISHNLYTYNILINCFCR 125
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ L+L M + G P + T S++ R+ DA L D+MV G P VT
Sbjct: 126 CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVT 185
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
+ A A+ L +M + G C P TYG ++ K + + M
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRG-CQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
+ + + ++ +Y+ +I LC+ + +A F EM KG P +T+ +L L
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 461 RTWRRLKKKLDEESIS 476
RL + E I+
Sbjct: 305 SDASRLLSDMIERKIN 320
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y V++ S L+DA GLF M +S P + ++ D + +KM+
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
G+ S +TY +L+ F + + + + M + G PD+ L++G C +
Sbjct: 106 ILGI-SHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGL 454
+A +M+E G+ P VTF TL GL
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGL 193
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 184/439 (41%), Gaps = 82/439 (18%)
Query: 92 LPNPPLSHSSFHL--LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTK 149
+ N L+ SS + +++ ++ + A + EM R + P+ S++ +++ D K
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 150 TT-----------------SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYT 192
+ T++L LC+ G V A F F P++ +T
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR-KMIDLGFKPNLINFT 291
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR----------------- 235
LI G CK G ++ A L EMV G +PNV T+ L++G+C+
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 236 ---KVSLHPEERF------ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQL 286
K ++H E + A+ +F M+E+G+ P+V +++ +++ + +A
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 287 SLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
+ + +M ++G P + TY + I L R +A L ++ G+ VTY +
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 347 EYRGRKDADSALKLF-------------------------KKMKED----------GLCS 371
E + D + AL F KKMKE GL
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI- 530
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
PT TY ++ + K I + + + +MK G PD Y LI GLC++ EAC+
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Query: 432 FVEMIEKGFLPQKVTFETL 450
+ MI++G P +VT TL
Sbjct: 591 YEAMIDRGLSPPEVTRVTL 609
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 148/353 (41%), Gaps = 44/353 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+F LID + K A++++ EM + PN T T L+D
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH------------------TALID 330
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LCK G+ + A +F R + P+V YT +I G+CK ++ A+ + M E+G+
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 221 PNVVTYNVLLNGVCRK---------VSLHPEERFERTIRDADKVFDEMRER--------- 262
PNV TY L+NG C+ ++L +E F I + D + ++
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 263 -------GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
G+E D +++I++ + + +L F M + G + +I
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH 375
+++++E LF +V G+ P TY Y D D ALK F MK G C P +
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG-CVPDSF 569
Query: 376 TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
TYG L+ K M+ +++ M + G+ P L + C+R A
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
M+ QG+ P+ T V++ G +E AE +FDEM GV P + +Y
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 354 ADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW--RDMKESGVGPDLDL 411
A + M + G P T ++L + ++ + IW R M + G P+L
Sbjct: 233 IQEADRWLTGMIQRGFI-PDNATCTLILTALCENGLVN--RAIWYFRKMIDLGFKPNLIN 289
Query: 412 YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTW 463
+T LI GLC++ ++A + EM+ G+ P T L GL + R W
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK----RGW 337
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL---------- 325
HV S H+ L D + EQ I VA+ S + + A G
Sbjct: 72 HVVSSPHRVNLDFDANSLTHEQAI-TVVASLASESGSMVALCFFYWAVGFEKFRHFMRLY 130
Query: 326 ---FDEMVRSG-VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
D ++ +G + C + + + A+ + M+ GL +P++ T +L
Sbjct: 131 LVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGL-TPSSITMNCVL 189
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
++ ++ +I + ++ +M GV PD Y L++ G K +EA ++ MI++GF+
Sbjct: 190 EIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFI 249
Query: 442 PQKVTFETLYRGLIQSDML-RTWRRLKKKLD 471
P T + L ++ ++ R +K +D
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMID 280
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 188/441 (42%), Gaps = 49/441 (11%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEM-DQRSLTPNPSTFLVL 140
ALS+F AK P S S+++ +I + + Q + ++ TEM ++ P+ T+ L
Sbjct: 181 ALSVFYQAKGRKCKPTS-STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSAL 239
Query: 141 IR------------RLVSDTKT-----TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
I RL + K T + +T LL K G V+ A ++F KR
Sbjct: 240 ISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR-AG 298
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE- 242
+P V YT LI G K GRV+ A F +M+ G+ P+VV N L+N + KV E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN-ILGKVGRVEEL 357
Query: 243 ------------------------ERFERT--IRDADKVFDEMRERGIEPDVTSFSIVLH 276
FE + + FD+M+ + P ++SI++
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
Y + ++ + +L M E+G P A Y S+I L R E A LF E+ + +
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
+ Y K + A+ LF +MK G P + Y L+ +KA MI +
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG-SGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
R M+E+G D++ + ++++G R A + F + G P VT+ TL
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 457 SDMLRTWRRLKKKLDEESISF 477
+ M R+ +++ ++ +
Sbjct: 597 AGMFEEAARMMREMKDKGFEY 617
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 179/406 (44%), Gaps = 44/406 (10%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRS-LTPNPSTFLV 139
+ + F +A N S++ LI + + R + ++ I E+ + + ++ +P+
Sbjct: 108 VKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE 167
Query: 140 LIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
L++ L K S+ +V + R C+ P Y +I
Sbjct: 168 LVKAL-GRAKMVSKALSVF----------------YQAKGRKCK--PTSSTYNSVILMLM 208
Query: 200 KLGRVETAQSFLNEMVERG-IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD--ADKVF 256
+ G+ E EM G P+ +TY+ L++ +E+ R+ A ++F
Sbjct: 209 QEGQHEKVHEVYTEMCNEGDCFPDTITYSALISS------------YEKLGRNDSAIRLF 256
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
DEM++ ++P ++ +L +Y + K + +LD F MK G PTV TYT +IK L
Sbjct: 257 DEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL--CSPTA 374
GR+++A G + +M+R G++P V N + +F +M G+ C+PT
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM---GMWRCTPTV 373
Query: 375 HTYGVLLQ-MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
+Y +++ +F + V + MK V P Y++LI G C+ + +A
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 434 EMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGS 479
EM EKGF P + +L L ++ L K+L E +FG+
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE---NFGN 476
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 30/267 (11%)
Query: 76 KHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPS 135
K H S F+ K+ P S ++ +LID K + + A L+ EMD++ P P+
Sbjct: 387 KAHVSEVSSWFDKMKADSVSP-SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
+ LI + L K + A E+F K + N ++Y V+I
Sbjct: 446 AYCSLI------------------NALGKAKRYEAANELFKELKENFG-NVSSRVYAVMI 486
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
+ K G++ A NEM +G P+V YN L++G+ + I +A+ +
Sbjct: 487 KHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA----------GMINEANSL 536
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
+M E G D+ S +I+L+ ++R P+ +++ F +K GI P TY +++ C A
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTYN 342
G E+A + EM G A+TY+
Sbjct: 597 AGMFEEAARMMREMKDKGFEYDAITYS 623
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 149/356 (41%), Gaps = 31/356 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTP------NPS 135
AL LF K P ++ + LI + K + D A+ +M + LTP N
Sbjct: 287 ALDLFEEMKRAGCSPTVYT-YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 136 TFLVLIRRLVSDTKTTSE------------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
L + R+ T SE + TV+ +V + F+ K
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS- 404
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
+P Y++LI G+CK RVE A L EM E+G P Y L+N +L +
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN------ALGKAK 458
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
R+E A+++F E++E +++++ + + K ++D F MK QG P V
Sbjct: 459 RYEA----ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV 514
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
Y +++ + G + +A L +M +G ++N + A+++F+
Sbjct: 515 YAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFET 574
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
+K G+ P TY LL F A M + R+MK+ G D Y+ ++ +
Sbjct: 575 IKHSGI-KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
KR F D YT ++ + + L+EMV G +PN VTYN L++ R
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
L+ +A VF++M+E G +PD ++ ++ ++++A +++D ++ M+ G
Sbjct: 415 LN----------EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+ P TY+ +I CL G L A LF EMV G +P VTYN + ++ +AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
KL++ M+ G P TY +++++ + + ++ +M++ PD +Y LL+
Sbjct: 525 KLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ +A Q++ M+ G P T +L
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 30/335 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL F + K P ++ ++ + + +QF +L+ EM + PN T+ LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ + Y+ A VFN + PD Y LI K
Sbjct: 407 H------------------SYGRANYLNEAMNVFN-QMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G ++ A M G+ P+ TY+V++N C + H + A K+F EM +
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGH--------LPAAHKLFCEMVD 497
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+G P++ +++I++ ++++A Q +L +R M+ G P TY+ V++ L CG LE+
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
AE +F EM + P Y + + + A + ++ M GL P T LL
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL-RPNVPTCNSLL 616
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
FL+ + I E+ ++M G+ P L YTLL+
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
KR F D YT ++ + + L+EMV G +PN VTYN L++ R
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
L+ +A VF++M+E G +PD ++ ++ ++++A +++D ++ M+ G
Sbjct: 415 LN----------EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+ P TY+ +I CL G L A LF EMV G +P VTYN + ++ +AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
KL++ M+ G P TY +++++ + + ++ +M++ PD +Y LL+
Sbjct: 525 KLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ +A Q++ M+ G P T +L
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 30/335 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL F + K P ++ ++ + + +QF +L+ EM + PN T+ LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ + Y+ A VFN + PD Y LI K
Sbjct: 407 H------------------SYGRANYLNEAMNVFN-QMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G ++ A M G+ P+ TY+V++N C + H + A K+F EM +
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGH--------LPAAHKLFCEMVD 497
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+G P++ +++I++ ++++A Q +L +R M+ G P TY+ V++ L CG LE+
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
AE +F EM + P Y + + + A + ++ M GL P T LL
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL-RPNVPTCNSLL 616
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
FL+ + I E+ ++M G+ P L YTLL+
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
KR F D YT ++ + + L+EMV G +PN VTYN L++ R
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
L+ +A VF++M+E G +PD ++ ++ ++++A +++D ++ M+ G
Sbjct: 415 LN----------EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+ P TY+ +I CL G L A LF EMV G +P VTYN + ++ +AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
KL++ M+ G P TY +++++ + + ++ +M++ PD +Y LL+
Sbjct: 525 KLYRDMQNAGF-EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ +A Q++ M+ G P T +L
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 30/335 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL F + K P ++ ++ + + +QF +L+ EM + PN T+ LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ + Y+ A VFN + PD Y LI K
Sbjct: 407 H------------------SYGRANYLNEAMNVFN-QMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G ++ A M G+ P+ TY+V++N C + H + A K+F EM +
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGH--------LPAAHKLFCEMVD 497
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+G P++ +++I++ ++++A Q +L +R M+ G P TY+ V++ L CG LE+
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
AE +F EM + P Y + + + A + ++ M GL P T LL
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL-RPNVPTCNSLL 616
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
FL+ + I E+ ++M G+ P L YTLL+
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 181/404 (44%), Gaps = 50/404 (12%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL------------ 144
++ SF +I + FD A + + EM R+++P LI L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 145 ---------VSDTKTTSEHFTVLLDTLCKYGYV----KLAAEVFNGNKRHCRFNPDVKMY 191
V DT+T++ LL LC+ G + ++ E+ R C D Y
Sbjct: 493 WFQFLNKGFVVDTRTSN----ALLHGLCEAGKLDEAFRIQKEILG---RGCVM--DRVSY 543
Query: 192 TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD 251
LI G C +++ A FL+EMV+RG++P+ TY++L+ G+ + +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM----------NKVEE 593
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A + +D+ + G+ PDV ++S+++ +A + + + F M + + P Y +I+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
GRL A L ++M G+SP + TY K + A LF++M+ +GL
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL-E 712
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P Y L+ + K + V+ + R+M V P+ YT++I G EA +
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 432 FVEMIEKGFLPQKVTF-ETLYRGLIQSDMLRTWRRLKKKLDEES 474
EM EKG +P +T+ E +Y L Q +L + K DEE+
Sbjct: 773 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF----KGSDEEN 812
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 177/398 (44%), Gaps = 33/398 (8%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS---------- 146
L+ S+++ LI K Q D A +L+ EM N +F +I L S
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 147 -------DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG--NKRHCRFNPDVKMYTVLIYG 197
+ T L+ LCK+G A E++ NK F D + L++G
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG---FVVDTRTSNALLHG 514
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
C+ G+++ A E++ RG + V+YN L++G C K + + +A D
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK----------KKLDEAFMFLD 564
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
EM +RG++PD ++SI++ +K + ++ + K G+ P V TY+ +I
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
R E+ + FDEM+ V P V YN + Y AL+L + MK G+ SP + TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATY 683
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
L++ + K ++ +M+ G+ P++ YT LI G + + + EM
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 438 KGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
K P K+T+ + G + + RL ++ E+ I
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 18/336 (5%)
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR-FNPDVKMYTVL 194
F VL + + +KTT +LL +L + + E F+ C+ +PDV ++T
Sbjct: 213 VFPVLANKGMFPSKTTC---NILLTSLVRANEFQKCCEAFD---VVCKGVSPDVYLFTTA 266
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I +CK G+VE A ++M E G+ PNVVT+N +++G L R++ +K
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDG------LGMCGRYDEAFMFKEK 320
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
M ERG+EP + ++SI++ +RA + + + M ++G P V Y ++I
Sbjct: 321 ----MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G L A + D MV G+S + TYN K Y AD+A +L K+M G +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF-NVNQ 435
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
++ ++ + M +M + P L T LI GLC+ K +A + + +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 435 MIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
+ KGF+ T L GL ++ L R++K++
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 166/393 (42%), Gaps = 29/393 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTV--- 157
+F+ +ID + ++D A+ +M +R + P T+ +L++ L + +F +
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 158 --------------LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
L+D+ + G + A E+ + + Y LI G+CK G+
Sbjct: 357 TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQ 415
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A+ L EM+ G N ++ ++ +C + RF EM R
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF----------VGEMLLRN 465
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+ P + ++ + K +L+ + +G T +++ L G+L++A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
+ E++ G V+YN G+K D A +M + GL P +TY +L+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICG 584
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+ + + W D K +G+ PD+ Y+++I G C+ ++ E +FF EM+ K P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 444 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
V + L R +S L L++ + + IS
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 181/404 (44%), Gaps = 50/404 (12%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL------------ 144
++ SF +I + FD A + + EM R+++P LI L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 145 ---------VSDTKTTSEHFTVLLDTLCKYGYV----KLAAEVFNGNKRHCRFNPDVKMY 191
V DT+T++ LL LC+ G + ++ E+ R C D Y
Sbjct: 493 WFQFLNKGFVVDTRTSN----ALLHGLCEAGKLDEAFRIQKEILG---RGCVM--DRVSY 543
Query: 192 TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD 251
LI G C +++ A FL+EMV+RG++P+ TY++L+ G+ + +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM----------NKVEE 593
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A + +D+ + G+ PDV ++S+++ +A + + + F M + + P Y +I+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
GRL A L ++M G+SP + TY K + A LF++M+ +GL
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL-E 712
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P Y L+ + K + V+ + R+M V P+ YT++I G EA +
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 432 FVEMIEKGFLPQKVTF-ETLYRGLIQSDMLRTWRRLKKKLDEES 474
EM EKG +P +T+ E +Y L Q +L + K DEE+
Sbjct: 773 LNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF----KGSDEEN 812
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 177/398 (44%), Gaps = 33/398 (8%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS---------- 146
L+ S+++ LI K Q D A +L+ EM N +F +I L S
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 147 -------DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG--NKRHCRFNPDVKMYTVLIYG 197
+ T L+ LCK+G A E++ NK F D + L++G
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG---FVVDTRTSNALLHG 514
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
C+ G+++ A E++ RG + V+YN L++G C K + + +A D
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK----------KKLDEAFMFLD 564
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
EM +RG++PD ++SI++ +K + ++ + K G+ P V TY+ +I
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
R E+ + FDEM+ V P V YN + Y AL+L + MK G+ SP + TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATY 683
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
L++ + K ++ +M+ G+ P++ YT LI G + + + EM
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 438 KGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
K P K+T+ + G + + RL ++ E+ I
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 18/336 (5%)
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR-FNPDVKMYTVL 194
F VL + + +KTT +LL +L + + E F+ C+ +PDV ++T
Sbjct: 213 VFPVLANKGMFPSKTTC---NILLTSLVRANEFQKCCEAFD---VVCKGVSPDVYLFTTA 266
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I +CK G+VE A ++M E G+ PNVVT+N +++G L R++ +K
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDG------LGMCGRYDEAFMFKEK 320
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
M ERG+EP + ++SI++ +RA + + + M ++G P V Y ++I
Sbjct: 321 ----MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G L A + D MV G+S + TYN K Y AD+A +L K+M G +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF-NVNQ 435
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
++ ++ + M +M + P L T LI GLC+ K +A + + +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 435 MIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
+ KGF+ T L GL ++ L R++K++
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 166/393 (42%), Gaps = 29/393 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTV--- 157
+F+ +ID + ++D A+ +M +R + P T+ +L++ L + +F +
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 158 --------------LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
L+D+ + G + A E+ + + Y LI G+CK G+
Sbjct: 357 TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQ 415
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A+ L EM+ G N ++ ++ +C + RF EM R
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF----------VGEMLLRN 465
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+ P + ++ + K +L+ + +G T +++ L G+L++A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
+ E++ G V+YN G+K D A +M + GL P +TY +L+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICG 584
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+ + + W D K +G+ PD+ Y+++I G C+ ++ E +FF EM+ K P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 444 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
V + L R +S L L++ + + IS
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 151/324 (46%), Gaps = 15/324 (4%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ--SFLN 212
F+ L+ + G + A VFN K + P++ Y +I C G +E Q F +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYG-LRPNLVTYNAVIDA-CGKGGMEFKQVAKFFD 328
Query: 213 EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFS 272
EM G++P+ +T+N LL VC + L R +FDEM R IE DV S++
Sbjct: 329 EMQRNGVQPDRITFNSLL-AVCSRGGLWEAAR---------NLFDEMTNRRIEQDVFSYN 378
Query: 273 IVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
+L + + L+ + M + I P V +Y++VI A GR ++A LF EM
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGV 392
G++ V+YN Y ++ AL + ++M G+ TY LL + K
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV-TYNALLGGYGKQGKYDE 497
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
VK+++ +MK V P+L Y+ LI G + ++EA + F E G V + L
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 453 GLIQSDMLRTWRRLKKKLDEESIS 476
L ++ ++ + L ++ +E IS
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGIS 581
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 29/248 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S++ L+D + K Q DLA++++ +M + + PN +VS ++ ++D
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN----------VVS--------YSTVID 417
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
K G A +F G R+ D Y L+ + K+GR E A L EM GI+
Sbjct: 418 GFAKAGRFDEALNLF-GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
+VVTYN LL G ++ + KVF EM+ + P++ ++S ++ YS+
Sbjct: 477 KDVVTYNALLGGYGKQGKYD----------EVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ +++ FR K G+ V Y+++I L G + A L DEM + G+SP VT
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 341 YNCFFKEY 348
YN +
Sbjct: 587 YNSIIDAF 594
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A ++F+ G V +FS ++ Y R+ + ++ F MKE G+ P + TY +VI
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 312 CLASCG-RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
G + FDEM R+GV P +T+N ++A LF +M +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI- 370
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
+Y LL K + + EI M + P++ Y+ +I G + ++ EA
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 431 FFVEMIEKGFLPQKVTFETL 450
F EM G +V++ TL
Sbjct: 431 LFGEMRYLGIALDRVSYNTL 450
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 30/240 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ L+ K ++D ++ TEM + + PN T+ + L+D
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY------------------STLID 522
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
K G K A E+F K DV +Y+ LI CK G V +A S ++EM + GI
Sbjct: 523 GYSKGGLYKEAMEIFREFK-SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS 581
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFER--TIRDADKVFDEMRERGIEPDVTSFS-IVLHV 277
PNVVTYN +++ R ++ + ++ + + E + F +
Sbjct: 582 PNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTES 641
Query: 278 YSRAHK------PQLS--LDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
+R K +LS L+ FR M + I P V T+++++ + C EDA L +E+
Sbjct: 642 NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 2/203 (0%)
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
F RER S ++ R K ++ F G TV ++++I
Sbjct: 221 FAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGR 280
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE-YRGRKDADSALKLFKKMKEDGLCSPTA 374
G E+A +F+ M G+ P VTYN +G + K F +M+ +G+ P
Sbjct: 281 SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGV-QPDR 339
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
T+ LL + + + + ++ +M + D+ Y L+ +C+ + A + +
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 435 MIEKGFLPQKVTFETLYRGLIQS 457
M K +P V++ T+ G ++
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKA 422
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 199/482 (41%), Gaps = 72/482 (14%)
Query: 34 DAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFNYAKSLP 93
D++L L ++ NPF + E +L ++ I + +++
Sbjct: 55 DSDLCFCYLSKNLNPFISFEVVKKL-----------------DNNPHIGFRFWEFSRFKL 97
Query: 94 NPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE 153
N S +++LL ++ K DLA Q+ M ++PN L+ K
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL--- 154
Query: 154 HFTV------------------LLDTLCKYGYVKLAAEVFNGNKRHCRFNP--DVKMYTV 193
HF LL+TL K V+ A ++F+ H RF D K + +
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFD---EHLRFQSCNDTKTFNI 211
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH-PEERFERT---- 248
LI G C +G+ E A L M G EP++VTYN L+ G C+ L+ E F+
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 249 ---------------------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLS 287
+R+A + D+M GI P +F++++ Y++A + L+
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE-MLT 330
Query: 288 LDKFR-MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
++ R M G P V T+TS+I G++ L++EM G+ P A TY+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
A +L ++ + P Y ++ F KA + I +M++
Sbjct: 391 ALCNENRLLKARELLGQLASKDII-PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
PD +T+LI G C + + EA F +M+ G P K+T +L L+++ M + L
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Query: 467 KK 468
+
Sbjct: 510 NQ 511
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 128/319 (40%), Gaps = 52/319 (16%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ +L +LCK G LA ++F K +P+ ++ L+ + + G++ A + L +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSD-GVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
E +E + N LLN +L +R E DA K+FDE
Sbjct: 165 FE--VEGCCMVVNSLLN------TLVKLDRVE----DAMKLFDE---------------- 196
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
H+ ++ C T+ +I+ L G+ E A L M G
Sbjct: 197 -HLRFQS------------------CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P VTYN + + + + A ++FK +K +CSP TY ++ + KA +
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ DM G+ P + +L+ G + + A + +MI G P VTF +L G
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 455 IQ----SDMLRTWRRLKKK 469
+ S R W + +
Sbjct: 358 CRVGQVSQGFRLWEEMNAR 376
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 199/482 (41%), Gaps = 72/482 (14%)
Query: 34 DAELVSKILLQHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIALSLFNYAKSLP 93
D++L L ++ NPF + E +L ++ I + +++
Sbjct: 55 DSDLCFCYLSKNLNPFISFEVVKKL-----------------DNNPHIGFRFWEFSRFKL 97
Query: 94 NPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE 153
N S +++LL ++ K DLA Q+ M ++PN L+ K
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL--- 154
Query: 154 HFTV------------------LLDTLCKYGYVKLAAEVFNGNKRHCRFNP--DVKMYTV 193
HF LL+TL K V+ A ++F+ H RF D K + +
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFD---EHLRFQSCNDTKTFNI 211
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH-PEERFERT---- 248
LI G C +G+ E A L M G EP++VTYN L+ G C+ L+ E F+
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 249 ---------------------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLS 287
+R+A + D+M GI P +F++++ Y++A + L+
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE-MLT 330
Query: 288 LDKFR-MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
++ R M G P V T+TS+I G++ L++EM G+ P A TY+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
A +L ++ + P Y ++ F KA + I +M++
Sbjct: 391 ALCNENRLLKARELLGQLASKDII-PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
PD +T+LI G C + + EA F +M+ G P K+T +L L+++ M + L
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Query: 467 KK 468
+
Sbjct: 510 NQ 511
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 128/319 (40%), Gaps = 52/319 (16%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ +L +LCK G LA ++F K +P+ ++ L+ + + G++ A + L +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSD-GVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
E +E + N LLN +L +R E DA K+FDE
Sbjct: 165 FE--VEGCCMVVNSLLN------TLVKLDRVE----DAMKLFDE---------------- 196
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
H+ ++ C T+ +I+ L G+ E A L M G
Sbjct: 197 -HLRFQS------------------CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P VTYN + + + + A ++FK +K +CSP TY ++ + KA +
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ DM G+ P + +L+ G + + A + +MI G P VTF +L G
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 455 IQ----SDMLRTWRRLKKK 469
+ S R W + +
Sbjct: 358 CRVGQVSQGFRLWEEMNAR 376
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 31/400 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT---------- 150
+++ LI K+ Q A ++ M +R + PN T+ LI L KT
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 151 -------TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ + ++++ LCK G V A E+ K+ R PD Y +L+ G C G
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR-RTRPDNITYNILLGGLCAKGD 402
Query: 204 VETAQSFLNEMVERG--IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
++ A L M++ +P+V++YN L++G+C++ LH A ++D + E
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ----------ALDIYDLLVE 452
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+ D + +I+L+ +A +++ ++ + + I TYT++I G L
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
A+GL +M S + P YNC D A +LF++M+ D P ++ +++
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN-NFPDVVSFNIMI 571
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
LKA I + + M +G+ PDL Y+ LI+ + EA FF +M++ GF
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Query: 442 PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEF 481
P +++ + I L KKL ++ I E
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 181/405 (44%), Gaps = 34/405 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL L N K S ++ +LID K + D A + EM L + + LI
Sbjct: 196 ALELANEMKG-SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 142 RR-----------------LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGN-KRHCR 183
R L + + L+ CK G +K A+E+F +R R
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
P+V YT LI G C +G+ + A LN M+E+ EPN VTYN+++N +C+
Sbjct: 315 --PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK-------- 364
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVL-HVYSRAHKPQLSLDKFRMMKEQGIC-P 301
+ + DA ++ + M++R PD +++I+L + ++ + S + M+K+ P
Sbjct: 365 --DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V +Y ++I L RL A ++D +V + VT N D + A++L+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
K++ + + + TY ++ F K M+ V K + M+ S + P + Y L+ LC+
Sbjct: 483 KQISDSKIVR-NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
+A + F EM P V+F + G +++ +++ L
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 136/318 (42%), Gaps = 48/318 (15%)
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
KR FN V + +L+ G C+ A S L EM + P+V +YN ++ G C
Sbjct: 135 KRGFAFN--VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG-- 190
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
+ + A ++ +EM+ G + ++ I++ + +A K ++ + MK G
Sbjct: 191 --------KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+ + YTS+I+ CG L+ + LFDE++ G SPCA+TYN + + A
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 359 KLFKKMKE--------------DGLCS--------------------PTAHTYGVLLQMF 384
++F+ M E DGLC P A TY +++
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL--P 442
K ++ EI MK+ PD Y +L+ GLC + EA + M++ P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 443 QKVTFETLYRGLIQSDML 460
+++ L GL + + L
Sbjct: 423 DVISYNALIHGLCKENRL 440
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA- 314
+ +M E + S S +L Y + K + +M ++G V + ++K L
Sbjct: 95 YRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR 154
Query: 315 --SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
CG+ A L EM R+ + P +YN + + K+ + AL+L +MK G CS
Sbjct: 155 NLECGK---AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG-CSW 210
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
+ T+G+L+ F KA + ++MK G+ DL +YT LI G C+ + F
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDMLR 461
E++E+G P +T+ TL RG + L+
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLK 299
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 171/375 (45%), Gaps = 36/375 (9%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
+L +F+ K P S ++ ++ + + Q +LA++ M + L P ++ VLI
Sbjct: 105 SLRVFHKMKDFDCDP-SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ L + T + L+ KR C +PD Y LI G C+
Sbjct: 164 KALCRNDGTVDAGLKIFLEM----------------PKRGC--DPDSYTYGTLISGLCRF 205
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
GR++ A+ EMVE+ P VVTY L+NG+C + + +A + +EM+
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG----------SKNVDEAMRYLEEMKS 255
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+GIEP+V ++S ++ + + +++ F MM +G P + TYT++I L ++++
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
A L D M G+ P A Y + A +M G+ +P T+ + +
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI-TPNRLTWNIHV 374
Query: 382 QMF------LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM 435
+ L A+ ++ M+ G+ +++ L+ LC++ ++++A Q E+
Sbjct: 375 KTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
Query: 436 IEKGFLPQKVTFETL 450
+ G +P K T++ L
Sbjct: 435 VTDGCIPSKGTWKLL 449
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
+V IE VV+ ++LL+ +CR R R D+ +VF +M++ +P ++
Sbjct: 74 IVRMKIENCVVSEDILLS-ICRGYG-----RVHRPF-DSLRVFHKMKDFDCDPSQKAYVT 126
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA-SCGRLEDAEGLFDEMVRS 332
VL + ++ L+ ++ M+E G+ PTVA+ +IK L + G ++ +F EM +
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGV 392
G P + TY D A KLF +M E C+PT TY L+ + +
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDE 245
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
+MK G+ P++ Y+ L+ GLC+ + +A + F M+ +G P VT+ TL
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 453 GLIQSDMLRTWRRLKKKLDEESI 475
GL + ++ L +++ + +
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGL 328
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 149 KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ 208
K T + + LL +L ++G V+ ++ +PD+ + L+ G+CKLG V A+
Sbjct: 117 KLTPKCYNNLLSSLARFGLVEEMKRLYTEMLED-LVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
++ +++ G +P+ TY + G CR+ + + A KVF EM + G +
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFITGHCRR----------KEVDAAFKVFKEMTQNGCHRNE 225
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE 328
S++ +++ A K +L MK+ CP V TYT +I L G+ +A LF +
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
M SG+ P Y + + D A L + M E+GL P TY L++ F K +
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL-MPNVITYNALIKGFCKKN 344
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+ + M E + PDL Y LI G C A + M E G +P + T
Sbjct: 345 -VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 12/299 (4%)
Query: 177 GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRK 236
G+ ++ K Y L+ + G VE + EM+E + P++ T+N L+NG C+
Sbjct: 109 GDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 237 VSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKE 296
+ +A + + + G +PD +++ + + R + + F+ M +
Sbjct: 169 ----------GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ 218
Query: 297 QGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
G +YT +I L ++++A L +M P TY G
Sbjct: 219 NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE 278
Query: 357 ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
A+ LFK+M E G+ P Y VL+Q F D + + M E+G+ P++ Y LI
Sbjct: 279 AMNLFKQMSESGI-KPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALI 337
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
G C +K +A +M+E+ +P +T+ TL G S L + RL ++E +
Sbjct: 338 KGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+ LI + + ++ D A L+ +M + PN T +TVL+D
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT------------------YTVLID 268
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LC G A +F PD MYTVLI +C ++ A L M+E G+
Sbjct: 269 ALCGSGQKSEAMNLFK-QMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNV+TYN L+ G C+K + A + +M E+ + PD+ +++ ++
Sbjct: 328 PNVITYNALIKGFCKK-----------NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCS 376
Query: 281 AHKPQLSLDKFRMMKEQGICPTVAT 305
+ + +M+E G+ P T
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPNQRT 401
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 11/243 (4%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
DV + T ++ CK G AQ+ EM E+GI PNV+TYN +++ C
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW------ 61
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
DAD++ M E+ I PD+ +FS +++ + + K + + ++ M I PT T
Sbjct: 62 ----SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTIT 117
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y S+I R++DA+ + D M G SP VT++ Y K D+ +++F +M
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
G+ + T TY L+ F + + +++ +M GV PD + ++ GLC +K+
Sbjct: 178 RRGIVANTV-TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Query: 426 REA 428
R+A
Sbjct: 237 RKA 239
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 35/265 (13%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCK 164
++D + K A L TEM ++ + PN T+ ++D+ C
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTY------------------NCMIDSFCH 57
Query: 165 YGYVKLAAEVFNGNKRHC---RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
G A ++ RH + NPD+ ++ LI + K +V A+ EM+ I P
Sbjct: 58 SGRWSDADQLL----RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP 113
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
+TYN +++G C+ + + DA ++ D M +G PDV +FS +++ Y +A
Sbjct: 114 TTITYNSMIDGFCK----------QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ ++ F M +GI TYT++I G L+ A+ L +EM+ GV+P +T+
Sbjct: 164 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Query: 342 NCFFKEYRGRKDADSALKLFKKMKE 366
+C +K+ A + + +++
Sbjct: 224 HCMLAGLCSKKELRKAFAILEDLQK 248
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 11/248 (4%)
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
M + I+ +VV +++ +C+ + +A +F EM E+GI P+V +++
Sbjct: 1 MGQSHIKADVVISTAIVDRLCK----------DGNHINAQNLFTEMHEKGIFPNVLTYNC 50
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
++ + + + + R M E+ I P + T++++I ++ +AE ++ EM+R
Sbjct: 51 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 110
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+ P +TYN + + D A ++ M G CSP T+ L+ + KA +
Sbjct: 111 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNG 169
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
EI+ +M G+ + YT LIHG C+ A EMI G P +TF + G
Sbjct: 170 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 229
Query: 454 LIQSDMLR 461
L LR
Sbjct: 230 LCSKKELR 237
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
+A LF +M E G+ P TY ++ F + ++ R M E + PD+ ++ L
Sbjct: 28 NAQNLFTEMHEKGI-FPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL 86
Query: 416 IHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKL 470
I+ + +K EA + + EM+ P +T+ ++ G + D + +R+ K
Sbjct: 87 INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC 146
Query: 471 DEESISFGSEFQNY 484
+ ++F + Y
Sbjct: 147 SPDVVTFSTLINGY 160
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 31/368 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
+++ +I+ K R F ++ M + + N T+ +L+ V + K +
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+T L+ C+ G +K A +F+ +P Y LI G CK+G
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFD-ELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A+ +NEM +G+ V +N L++G CRK + +A ++D M ++G
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK----------GMVDEASMIYDVMEQKG 429
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLD-KFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
+ DV + + + ++R + + FRMM E G+ + +YT++I G +E+A
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMM-EGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+ LF EM GV P A+TYN Y + A KL M+ +G+ P ++TY L+
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM-DPDSYTYTSLIH 547
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
AD + ++ +M G+ + YT++I GL + K EA + EM KG+
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 443 QKVTFETL 450
+ L
Sbjct: 608 DNKVYTAL 615
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 164/371 (44%), Gaps = 29/371 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
S ++++ + + + + + +LI E + + P T+ +I V +
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+T+L++ K G + A ++F+ R DV +YT LI C+ G
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD-EMRERGIESDVHVYTSLISWNCRKGN 344
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
++ A +E+ E+G+ P+ TY L++GVC+ + A+ + +EM+ +G
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA----------AEILMNEMQSKG 394
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+ F+ ++ Y R + + +M+++G V T ++ C R ++A+
Sbjct: 395 VNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAK 454
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
M+ GV V+Y Y + + A +LF +M G+ P A TY V++
Sbjct: 455 QWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV-QPNAITYNVMIYA 513
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+ K I +++ +M+ +G+ PD YT LIHG C EA + F EM KG
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
Query: 444 KVTFETLYRGL 454
VT+ + GL
Sbjct: 574 SVTYTVMISGL 584
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 26/309 (8%)
Query: 192 TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR- 250
T+++ G C+ G VE ++ + E +GI+P TYN ++N ++ E + ++
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 251 ------------------------DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQL 286
DA+K+FDEMRERGIE DV ++ ++ R +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 287 SLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
+ F + E+G+ P+ TY ++I + G + AE L +EM GV+ V +N
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
Y + D A ++ M++ G T + F + K+ M E GV
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGF-QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
YT LI C+ EA + FVEM KG P +T+ + + ++ R+L
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 467 KKKLDEESI 475
+ ++ +
Sbjct: 527 RANMEANGM 535
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 14/264 (5%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
R++ MV+ G++ V + +++ G+CR+ + + K+ E +
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRR----------GEVEKSKKLIKEFSVK 253
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI+P+ +++ +++ Y + ++MK+ G+ TYT +++ G++ DA
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
E LFDEM G+ Y + + A LF ++ E GL SP+++TYG L+
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGL-SPSSYTYGALID 372
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
K +G + + +M+ GV ++ LI G C + EA + M +KGF
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 443 QKVTFETL---YRGLIQSDMLRTW 463
T T+ + L + D + W
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQW 456
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
FE +R VFD M ++G+ D S + L + + L L+ FR M + G+ TV
Sbjct: 170 FEEGLR----VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVY 225
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
+ T V++ L G +E ++ L E G+ P A TYN Y ++D + K M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
K+DG+ TY +L+++ +K + ++++ +M+E G+ D+ +YT LI C +
Sbjct: 286 KKDGVVYNKV-TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNY 484
+ A F E+ EKG P T+ L G+ + + L ++ + ++ N
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 485 QLKPYRR 491
+ Y R
Sbjct: 405 LIDGYCR 411
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
LS S+ LID K + A +L EM + + PN T+ V+I
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY-------------- 512
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
CK G +K A N +PD YT LI+G C V+ A +EM
Sbjct: 513 ----AYCKQGKIK-EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL 567
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
+G++ N VTY V+++G+ + + +E F ++DEM+ +G D ++ ++
Sbjct: 568 KGLDQNSVTYTVMISGLSK--AGKSDEAF--------GLYDEMKRKGYTIDNKVYTALI- 616
Query: 277 VYSRAHKPQ 285
H P+
Sbjct: 617 --GSMHSPE 623
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 12/280 (4%)
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+CK G+V+ A SFL M ++GIEPNVV YN ++ CR + + A +F
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM----------KNMDLARSIFS 508
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
EM E+G+EP+ ++SI++ + + Q + D M Y ++I L G
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 318 RLEDAEGLFDEMVRSG-VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
+ A+ + +++ S +YN + D DSA++ +++M E+G SP T
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG-KSPNVVT 627
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
+ L+ F K++ + + E+ +MK + DL Y LI G C++ + A F E+
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 437 EKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
E G +P + +L G + L KK+ + IS
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 161/363 (44%), Gaps = 28/363 (7%)
Query: 111 KVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL-----------------VSDTKTTSE 153
+++ DLA + +EM ++ L PN T+ +LI S+ +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 154 HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNE 213
+ +++ LCK G A E+ + R++ Y +I G+ K+G ++A E
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
M E G PNVVT+ L+NG C+ R + + ++ EM+ ++ D+ ++
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKS------NRMDLAL----EMTHEMKSMELKLDLPAYGA 665
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
++ + + + + + F + E G+ P V+ Y S+I + G+++ A L+ +MV G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+S TY + + A L+ ++ + G+ P + VL+ K
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV-PDEILHMVLVNGLSKKGQFLKA 784
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
++ +MK+ V P++ LY+ +I G EA + EM+EKG + F L G
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Query: 454 LIQ 456
++
Sbjct: 845 RVE 847
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 161/375 (42%), Gaps = 63/375 (16%)
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
CK G V AA F P+V Y ++ C++ ++ A+S +EM+E+G+EP
Sbjct: 459 FCKQGKVD-AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 222 NV-----------------------------------VTYNVLLNGVCRK---------- 236
N V YN ++NG+C+
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 237 VSLHPEERFERTIRDADKVFD----------------EMRERGIEPDVTSFSIVLHVYSR 280
+L E+R+ + + + D EM E G P+V +F+ +++ + +
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+++ L+L+ MK + + Y ++I ++ A LF E+ G+ P
Sbjct: 638 SNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSV 697
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN +R D+A+ L+KKM DG+ S TY ++ LK I + +++ ++
Sbjct: 698 YNSLISGFRNLGKMDAAIDLYKKMVNDGI-SCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
+ G+ PD L+ +L++GL ++ ++ +A + EM +K P + + T+ G + L
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 816
Query: 461 RTWRRLKKKLDEESI 475
RL ++ E+ I
Sbjct: 817 NEAFRLHDEMLEKGI 831
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 147/341 (43%), Gaps = 13/341 (3%)
Query: 134 PSTFLVLIRRLVS-DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYT 192
P + + RR++S + F++ + CK + +A ++ + + YT
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDA 252
+I + K G +E A ++EMV GI +V+ L+NG C+ L A
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG----------KA 364
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
+F+ M E G+ PD FS+++ + + + + +++ + MK I P+ ++I+
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
E A +F++ S ++ N F + + D+A K M++ G+ P
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAH-GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI-EP 482
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
Y ++ + + + + I+ +M E G+ P+ Y++LI G + K + A
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 473
+M F +V + T+ GL + + + + L +E
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 35/276 (12%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
+S +S++ +ID KV D A + EM + +PN T FT
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT------------------FT 629
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
L++ CK + LA E+ + + D+ Y LI G+CK ++TA + +E+ E
Sbjct: 630 SLINGFCKSNRMDLALEMTH-EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD---EMRERGIEPDVTSFSI 273
G+ PNV YN L++G R + D D +M GI D+ +++
Sbjct: 689 LGLMPNVSVYNSLISGF-------------RNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
++ + L+ D + + + GI P + ++ L+ G+ A + +EM +
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
V+P + Y+ + + + A +L +M E G+
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 151/386 (39%), Gaps = 61/386 (15%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTM-AKVRQFDLAWQLITEM--DQRSLTPNPSTFL 138
AL N+ K L F +LI + + + D A L+ + +L PN
Sbjct: 96 ALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPN----- 150
Query: 139 VLIRRLVSDTK-----TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTV 193
V++ LV +K T F LL+ + + A + F G + P V
Sbjct: 151 VMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCF-GLMVDRKVVPFVPYVNN 209
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
++ + ++ A+ N+MV G+ + VT +L+ R ER +A
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLR----------ERKPEEAV 259
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GICPTVATYTSVIKC 312
K+F + RG EPD FS+ + + ++LD R M+ + G+ + TYTSVI
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
G +E+A + DEMV G+ + Y + AL LF +
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR--------- 370
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
M+E G+ PD ++++++ C+ + +A +F+
Sbjct: 371 ---------------------------MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSD 458
+ M P V T+ +G ++++
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAE 429
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 132/324 (40%), Gaps = 21/324 (6%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T L++ CK + A ++FN + PD M++V++ +CK +E A F M
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEG-LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
I P+ V + ++ G + S PE E +F++ E I I L
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAES--PEAALE--------IFNDSFESWIAHGFMCNKIFL 457
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
++ + K + +MM+++GI P V Y +++ ++ A +F EM+ G+
Sbjct: 458 -LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
P TY+ + KD +A + +M Y ++ K KE
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF-EANEVIYNTIINGLCKVGQTSKAKE 575
Query: 396 IWRDM-KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ +++ KE Y +I G + A + + EM E G P VTF +L G
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 455 IQSD-------MLRTWRRLKKKLD 471
+S+ M + ++ KLD
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLD 659
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 30/201 (14%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----------------RRL 144
++ LID K A+ L +E+ + L PN S + LI +++
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 145 VSDTKTTSEH-FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
V+D + +T ++D L K G + LA+++++ PD ++ VL+ G K G+
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYS-ELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
A L EM ++ + PNV+ Y+ ++ G R E + +A ++ DEM E+G
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHR----------EGNLNEAFRLHDEMLEKG 830
Query: 264 IEPDVTSFSIVLHVYSRAHKP 284
I D T F+++ V R KP
Sbjct: 831 IVHDDTVFNLL--VSGRVEKP 849
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
+ + D + G E +F+ +L+ Y R + ++D F +M ++ + P V +V+
Sbjct: 153 VNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS 212
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
L +++A+ ++++MV GV+ VT + + + A+K+F+++ G
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG-AE 271
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMK-ESGVGPDLDLYTLLIHGLCERKKWREACQ 430
P + + +Q K + + ++ R+M+ + GV + YT +I + EA +
Sbjct: 272 PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVR 331
Query: 431 FFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
EM+ G + +L G + + L L +++EE ++
Sbjct: 332 VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 156/379 (41%), Gaps = 33/379 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +ID K + D A +L M + PN T+ ++ L+ ++E +L D
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS-LLGKKSRSNEMIKMLCD 446
Query: 161 -----------------TLC-KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
LC G K VF + C F PD + LI + + G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR-EMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
A EM G V TYN LLN + RK R + V +M+ +
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW----------RSGENVISDMKSK 555
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKF-RMMKEQGICPTVATYTSVIKCLASCGRLED 321
G +P TS+S++L Y++ L +++ +KE I P+ +++ C L
Sbjct: 556 GFKPTETSYSLMLQCYAKGGN-YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG 614
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
+E F + G P V +N + D A + + ++EDGL SP TY L+
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL-SPDLVTYNSLM 673
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
M+++ +EI + +++S + PDL Y +I G C R +EA + EM E+G
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
Query: 442 PQKVTFETLYRGLIQSDML 460
P T+ T G M
Sbjct: 734 PCIFTYNTFVSGYTAMGMF 752
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 29/291 (9%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLN-------------GV 233
DV+ YT +++ + + G+ E A M E G P +VTYNV+L+ GV
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 234 C---RKVSLHPEE----------RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
R L +E E +R+A + F E++ G EP +++ +L V+ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
A +L + M+E TY ++ G ++A G+ + M + GV P A+T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y Y D ALKLF MKE G C P TY +L + K + ++ DM
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAG-CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWRE-ACQFFVEMIEKGFLPQKVTFETL 450
K +G P+ + ++ LC K + + F EM GF P + TF TL
Sbjct: 448 KSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A K+ D++ + DV +++ +LH YSR K + ++D F MKE G PT+ TY ++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 312 CLASCGR------------------------------------LEDAEGLFDEMVRSGVS 335
GR L +A+ F E+ G
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
P VTYN + + AL + K+M+E+ C + TY L+ +++A
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENS-CPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ M + GV P+ YT +I + K EA + F M E G +P T+ +
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/294 (17%), Positives = 123/294 (41%), Gaps = 42/294 (14%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
++++ L++ +A+ + +I++M + P T ++++L
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKP------------------TETSYSLML 568
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
K G L E + + P + L+ K + ++ + G
Sbjct: 569 QCYAKGGNY-LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
+P++V +N +L+ R A+ + + +RE G+ PD+ +++ ++ +Y
Sbjct: 628 KPDMVIFNSMLSIFTRN----------NMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
R + + + + +++ + P + +Y +VIK G +++A + EM G+ PC
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKE------DGLCSPTAHTYGVLLQMFLKA 387
TYN F Y +A+ +F ++++ C P T+ +++ + +A
Sbjct: 738 TYNTFVSGY-------TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
K+H + PD+ ++ ++ + + + A+ L + E G+ P++VTYN L++ R+
Sbjct: 623 KKH-GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
E +T+ + ++PD+ S++ V+ + R Q ++ M E+G
Sbjct: 682 CWKAEEILKTLEKSQ----------LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
I P + TY + + + G + E + + M ++ P +T+ Y A+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 359 KLFKKMK 365
K+K
Sbjct: 792 DFVSKIK 798
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 161/361 (44%), Gaps = 29/361 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS-------------- 146
+++ L+ K A +++EM++R ++P+ T+ +LI V+
Sbjct: 341 AYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM 400
Query: 147 ---DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
D + S F+ LL G + +V + PD + Y V+I + K
Sbjct: 401 EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK-EMKSIGVKPDRQFYNVVIDTFGKFNC 459
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
++ A + + M+ GIEP+ VT+N L++ C+ R I A+++F+ M RG
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKH---------GRHIV-AEEMFEAMERRG 509
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
P T+++I+++ Y + MK QGI P V T+T+++ GR DA
Sbjct: 510 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 569
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
+EM G+ P + YN Y R ++ A+ F+ M DGL P+ L+
Sbjct: 570 ECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL-KPSLLALNSLINA 628
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
F + + + MKE+GV PD+ YT L+ L K+++ + EMI G P
Sbjct: 629 FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Query: 444 K 444
+
Sbjct: 689 R 689
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 12/305 (3%)
Query: 146 SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
S K + + LL K G +K A + + ++ +PD Y++LI + GR E
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWE 391
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
+A+ L EM ++PN ++ LL G +++T +V EM+ G++
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAG------FRDRGEWQKTF----QVLKEMKSIGVK 441
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
PD +++V+ + + + ++ F M +GI P T+ ++I C GR AE +
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
F+ M R G PCA TYN Y ++ D +L KMK G+ P T+ L+ ++
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL-PNVVTHTTLVDVYG 560
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
K+ E +MK G+ P +Y LI+ +R +A F M G P +
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 446 TFETL 450
+L
Sbjct: 621 ALNSL 625
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 31/337 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNP-----------------STFLVLIRR 143
++ LLID +++ A ++ EM+ + PN TF VL
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
K + + V++DT K+ + A F+ PD + LI CK GR
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDCHCKHGR 494
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
A+ M RG P TYN+++N S +ER++ D ++ +M+ +G
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMIN------SYGDQERWD----DMKRLLGKMKSQG 544
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
I P+V + + ++ VY ++ + +++ MK G+ P+ Y ++I A G E A
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 604
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEY-RGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
F M G+ P + N + R+DA+ A + + MKE+G+ P TY L++
Sbjct: 605 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE-AFAVLQYMKENGV-KPDVVTYTTLMK 662
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
++ D V ++ +M SG PD ++L L
Sbjct: 663 ALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
Y LI + +E A + + +M + G + + V Y++++ + R +
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLL----- 254
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
+++ E+ +E DV + ++ ++++ P +L M + G+ AT S+I
Sbjct: 255 ---RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSII 311
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
LA GR +AE LF+E+ +SG+ P YN K Y A + +M++ G+
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV- 370
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
SP HTY +L+ ++ A + + ++M+ V P+ +++ L+ G +R +W++ Q
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 431 FFVEMIEKGFLPQK 444
EM G P +
Sbjct: 431 VLKEMKSIGVKPDR 444
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 156/379 (41%), Gaps = 28/379 (7%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
L+ +++ LI A+ + A LI +M Q + + ++I+ L K S
Sbjct: 195 LTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDS---- 250
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
V+L ++L E+ + DV++ +I G+ K G A L
Sbjct: 251 VML--------LRLYKEI-----ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQA 297
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
G+ T +++ + RT+ +A+ +F+E+R+ GI+P +++ +L
Sbjct: 298 TGLSAKTATLVSIISALADS---------GRTL-EAEALFEELRQSGIKPRTRAYNALLK 347
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
Y + + + M+++G+ P TY+ +I + GR E A + EM V P
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
+ ++ +R R + ++ K+MK G+ P Y V++ F K + +
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV-KPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+ M G+ PD + LI C+ + A + F M +G LP T+ +
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 457 SDMLRTWRRLKKKLDEESI 475
+ +RL K+ + I
Sbjct: 527 QERWDDMKRLLGKMKSQGI 545
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 165/375 (44%), Gaps = 37/375 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS--DTKTTSEHFTVL 158
S+ +I+ +AK + D A +L EM +R + P+ + + +LI + D KT E + L
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 159 LDTLCKYGYVKLAAEVFNGNKRHCRFN---------------PDVKMYTVLIYGWCKLGR 203
L+ Y VK + +G + R + D+ Y+ LI+G C G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
V+ A+S NE+ ER +VVTYN +L G CR + R + + V
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-------- 357
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
++ S++I++ K + +R+M +G TY I L G + A
Sbjct: 358 ---NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 324 GLFDEMVRSG----VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
G+ E+ SG V A +C K +K + A L K+M + G+ +H
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCK----KKRLEEASNLVKEMSKHGV-ELNSHVCNA 469
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
L+ ++ +G R+M ++G P + Y +LI GLC+ K+ EA F EM+E G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 440 FLPQKVTFETLYRGL 454
+ P T+ L GL
Sbjct: 530 WKPDLKTYSILLCGL 544
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 17/303 (5%)
Query: 180 RHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER-GIEPNVVTYNVLLNGVCRKVS 238
+ C+ + DV + + YG K + A M E G EP + +YN LLN
Sbjct: 72 QECKCDEDVALSVIKTYG--KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA-- 127
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
+ + +F G+ P++ ++++++ + + + + + M ++G
Sbjct: 128 --------KQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
P V +Y++VI LA G+L+DA LFDEM GV+P YN + KD +A+
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
+L+ ++ ED P T+ +++ K + +IW MK++ DL Y+ LIHG
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ----SDMLRTWRRLKKKLDEES 474
LC+ +A F E+ E+ VT+ T+ G + + L WR ++ K
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359
Query: 475 ISF 477
+S+
Sbjct: 360 VSY 362
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 170/403 (42%), Gaps = 32/403 (7%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL +F + + + S++ L++ + +Q+ L + + PN T+ VLI
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ +S K E LD + K G F PDV Y+ +I K
Sbjct: 157 K--MSCKKKEFEKARGFLDWMWKEG-----------------FKPDVFSYSTVINDLAKA 197
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G+++ A +EM ERG+ P+V YN+L++G + E+ + A +++D + E
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLK----------EKDHKTAMELWDRLLE 247
Query: 262 -RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+ P+V + +I++ S+ + L + MK+ + TY+S+I L G ++
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
AE +F+E+ S VTYN + +L+L++ M+ S +Y +L
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN--SVNIVSYNIL 365
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
++ L+ I IWR M G D Y + IHGLC +A E+ G
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 441 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQN 483
+ ++ L + L L K++ + + S N
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 150/374 (40%), Gaps = 66/374 (17%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL------------VSDT 148
S+++LI + + + D A + M + + +T+ + I L + +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 149 KTTSEHFTV-----LLDTLCKYGYVKLAAEVFNGNKRH-CRFNPDVKMYTVLIYGWCKLG 202
+++ H V ++D LCK ++ A+ + +H N V LI G +
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV--CNALIGGLIRDS 478
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
R+ A FL EM + G P VV+YN+L+ G+C+ F + EM E
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVK----------EMLEN 528
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G +PD+ ++SI+L R K L+L+ + + G+ V + +I L S G+L+DA
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+ M E+R C+ TY L++
Sbjct: 589 MTVMANM-----------------EHRN-------------------CTANLVTYNTLME 612
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
F K IW M + G+ PD+ Y ++ GLC + A +FF + G P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 443 QKVTFETLYRGLIQ 456
T+ L R ++
Sbjct: 673 TVYTWNILVRAVVN 686
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 7/235 (2%)
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC-PTVAT 305
R + ++ + +R + + D V+ Y + P +LD F+ M+E C P + +
Sbjct: 57 RMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRS 116
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y +++ + E LF +GV+P TYN K +K+ + A M
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
++G P +Y ++ KA + E++ +M E GV PD+ Y +LI G + K
Sbjct: 177 KEGF-KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 426 REACQFFVEMIE-KGFLPQKVTFETLYRGLIQ----SDMLRTWRRLKKKLDEESI 475
+ A + + ++E P T + GL + D L+ W R+K+ E+ +
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 162/363 (44%), Gaps = 34/363 (9%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
+K+A F + N + + +HLL+ A+ ++ +LI EM + TF
Sbjct: 132 AKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFN 191
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN--PDVKMYTVLIY 196
+LI C G LA +V + FN P Y +++
Sbjct: 192 LLI---------------------CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 197 GWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVF 256
+ + + +M+E G P+V+TYN+++ R L +R R +
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFR---LGKTDRLYR-------LL 280
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
DEM + G PD+ +++I+LH + +KP +L+ M+E G+ P V +T++I L+
Sbjct: 281 DEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRA 340
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
G+LE + DE V+ G +P V Y Y + + A ++FK+M E G P T
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL-PNVFT 399
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
Y +++ F A + ++M+ G P+ +Y+ L++ L K EA + +M+
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Query: 437 EKG 439
EKG
Sbjct: 460 EKG 462
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 11/304 (3%)
Query: 168 VKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYN 227
KLA + F F Y +L+ + + G + ++EM++ G T+N
Sbjct: 132 AKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFN 191
Query: 228 VLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLS 287
+L+ C + L RD + F + + P S++ +LH + +L
Sbjct: 192 LLI-CTCGEAGL---------ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLI 241
Query: 288 LDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE 347
+ M E G P V TY V+ G+ + L DEMV+ G SP TYN
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHH 301
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
+AL L M+E G+ P + L+ +A + K + + G P
Sbjct: 302 LATGNKPLAALNLLNHMREVGV-EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLK 467
D+ YT++I G + +A + F EM EKG LP T+ ++ RG + + L
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420
Query: 468 KKLD 471
K+++
Sbjct: 421 KEME 424
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
++ DEM + G +F++++ A + +++F K P +Y +++ L
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTYN-CFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
+ + + ++++M+ G +P +TYN F +R K D +L +M +DG SP
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK-TDRLYRLLDEMVKDGF-SP 290
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
+TY +LL + + M+E GV P + +T LI GL K EAC++F
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYF 349
Query: 433 V-EMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
+ E ++ G P V + + G I L + K++ E+
Sbjct: 350 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 167/404 (41%), Gaps = 66/404 (16%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL----------------- 144
F+LLID + Q+ A L ++ + P T+ +LI+
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 145 ---VSDTKTTSEHFTVLLDTLCK-YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
VS + ++ L K G + A +VF KR R P + Y ++I + K
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTTETYNLMINLYGK 276
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
+ + EM +PN+ TY L+N R E A+++F++++
Sbjct: 277 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR----------EGLCEKAEEIFEQLQ 326
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
E G+EPDV ++ ++ YSRA P + + F +M+ G P A+Y ++ G
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL----------- 369
DAE +F+EM R G++P ++ Y +D + K+M E+G+
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 370 -----------------------CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
C+ TY +L+ ++ KA + ++E++ ++KE
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 506
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
PD+ +T I +K + + + F EMI+ G P T + L
Sbjct: 507 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 550
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
+R+ +PDV F++++ Y + + + + + + E PT TY +IK G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 319 LEDAEGLFDEMVRSGVSPCAV---TYNCFFKEYRGRK-DADSALKLFKKMKEDGLCSPTA 374
+E AE + EM VSP + YN + + RK + + A+ +F++MK D C PT
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTT 264
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH-----GLCERKKWREAC 429
TY +++ ++ KA + +++ +M+ P++ YT L++ GLCE+ A
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK-----AE 319
Query: 430 QFFVEMIEKGFLPQKVTFETL 450
+ F ++ E G P + L
Sbjct: 320 EIFEQLQEDGLEPDVYVYNAL 340
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 167/404 (41%), Gaps = 66/404 (16%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL----------------- 144
F+LLID + Q+ A L ++ + P T+ +LI+
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 145 ---VSDTKTTSEHFTVLLDTLCK-YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
VS + ++ L K G + A +VF KR R P + Y ++I + K
Sbjct: 240 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTTETYNLMINLYGK 298
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
+ + EM +PN+ TY L+N R E A+++F++++
Sbjct: 299 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR----------EGLCEKAEEIFEQLQ 348
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
E G+EPDV ++ ++ YSRA P + + F +M+ G P A+Y ++ G
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL----------- 369
DAE +F+EM R G++P ++ Y +D + K+M E+G+
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 370 -----------------------CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
C+ TY +L+ ++ KA + ++E++ ++KE
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 528
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
PD+ +T I +K + + + F EMI+ G P T + L
Sbjct: 529 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 572
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
+R+ +PDV F++++ Y + + + + + + E PT TY +IK G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 319 LEDAEGLFDEMVRSGVSPCAV---TYNCFFKEYRGRK-DADSALKLFKKMKEDGLCSPTA 374
+E AE + EM VSP + YN + + RK + + A+ +F++MK D C PT
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRD-RCKPTT 286
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH-----GLCERKKWREAC 429
TY +++ ++ KA + +++ +M+ P++ YT L++ GLCE+ A
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK-----AE 341
Query: 430 QFFVEMIEKGFLPQKVTFETL 450
+ F ++ E G P + L
Sbjct: 342 EIFEQLQEDGLEPDVYVYNAL 362
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 172/408 (42%), Gaps = 45/408 (11%)
Query: 77 HHSKIALSLFNYAKS-LPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPS 135
+H A F +S P S ++LL+++ K R+ + L +M + P
Sbjct: 89 NHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTY 148
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGN-KRHCRFNPDVKMYTVL 194
TF +LIR LC V A E+F+ ++ C+ P+ + +L
Sbjct: 149 TFNLLIR------------------ALCDSSCVDAARELFDEMPEKGCK--PNEFTFGIL 188
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
+ G+CK G + LN M G+ PN V YN +++ CR E D++K
Sbjct: 189 VRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR----------EGRNDDSEK 238
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHK--------PQLSLDKFRMMKEQGICPTVATY 306
+ ++MRE G+ PD+ +F+ + + K + LD++ + P TY
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR----PNSITY 294
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
++K G LEDA+ LF+ + + +YN + + A + K+M +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
G+ P+ ++Y +L+ K M+ K I MK +GV PD Y L+HG C K
Sbjct: 355 KGI-GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
A EM+ LP T L L + + L +K++E+
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 179/444 (40%), Gaps = 67/444 (15%)
Query: 82 ALSLFNYAKS---LPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
L L N +S LPN + ++ ++ + + + D + +++ +M + L P+ TF
Sbjct: 201 GLELLNAMESFGVLPNKVI----YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN 256
Query: 139 VLIRRLVSDTKT---------------------TSEHFTVLLDTLCKYGYVKLAAEVFNG 177
I L + K S + ++L CK G ++ A +F
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF-- 314
Query: 178 NKRHCRFNPDV---KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC 234
R N D+ + Y + + G + G+ A++ L +M ++GI P++ +YN+L++G+C
Sbjct: 315 --ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 235 RKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
+ L DA + M+ G+ PD ++ +LH Y K + + M
Sbjct: 373 KLGMLS----------DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
P T ++ L GR+ +AE L +M G VT N G +
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 355 DSALKLFKKMK------------------EDGL----CSPTAHTYGVLLQMFLKADMIGV 392
D A+++ K M+ +D L C P TY LL KA
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
K ++ +M + PD Y + IH C++ K A + +M +KG T+ +L
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 453 GLIQSDMLRTWRRLKKKLDEESIS 476
GL + + L ++ E+ IS
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGIS 626
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 171/396 (43%), Gaps = 46/396 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL-----VSDT-----KT 150
++ L+ V + D A L+ EM + + PN T +L+ L +S+ K
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM 457
Query: 151 TSEHF-------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
+ + +++D LC G + A E+ G + H G LG
Sbjct: 458 NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH---------------GSAALGN 502
Query: 204 VETAQSFL--NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
+ + L + ++E P+++TY+ LLNG+C+ RF +A +F EM
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA------GRFA----EAKNLFAEMMG 552
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
++PD +++I +H + + K + + M+++G ++ TY S+I L ++ +
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
GL DEM G+SP TYN + + + A L +M + + +P ++ L+
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI-APNVFSFKYLI 671
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
+ F K + +E++ + S G LY+L+ + L + +A + ++++GF
Sbjct: 672 EAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFE 730
Query: 442 PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISF 477
++ L L + D L + K+ + F
Sbjct: 731 LGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 175/392 (44%), Gaps = 32/392 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------RRLVSDT 148
+F+++I+ + K + A + M+ + P T+ L+ R ++S+
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 149 KTTS-----EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
K+ + + +L +C G A+EV + PD Y +LI G G
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGR---ASEVLR-EMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+E A ++ +EMV++G+ P TYN L++G+ E I A+ + E+RE+G
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF----------MENKIEAAEILIREIREKG 392
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
I D +++I+++ Y + + + M GI PT TYTS+I L + +A+
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
LF+++V G+ P V N + + D A L K+M + +P TY L++
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI-NPDDVTYNCLMRG 511
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+E+ +MK G+ PD Y LI G ++ + A EM+ GF P
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 444 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
+T+ L +GL ++ L +++ E I
Sbjct: 572 LLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 159/375 (42%), Gaps = 33/375 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F LL+ ++R D A + M ++ P T H LL
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTET---------------CNHILTLLSR 202
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
L + A VF + +V + ++I CK G+++ A+ FL M GI+P
Sbjct: 203 LNRIE----NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
+VTYN L+ G I A + EM+ +G +PD+ +++ +L
Sbjct: 259 TIVTYNTLVQGF----------SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE 308
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ + R MKE G+ P +Y +I+ ++ G LE A DEMV+ G+ P TY
Sbjct: 309 GRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY 365
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
N ++A L ++++E G+ + TY +L+ + + + +M
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSV-TYNILINGYCQHGDAKKAFALHDEMM 424
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLR 461
G+ P YT LI+ LC + K REA + F +++ KG P V TL G +
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 462 TWRRLKKKLDEESIS 476
L K++D SI+
Sbjct: 485 RAFSLLKEMDMMSIN 499
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 38/312 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+++LI + ++A+ EM ++ + P T+ LI L + K
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE--------- 379
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
AAE+ R D Y +LI G+C+ G + A + +EM+ GI+
Sbjct: 380 ----------AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQ 429
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P TY L+ +CRK R+AD++F+++ +G++PD+ ++++
Sbjct: 430 PTQFTYTSLIYVLCRK----------NKTREADELFEKVVGKGMKPDL----VMMNTLMD 475
Query: 281 AHKPQLSLDK-FRMMKEQ---GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
H ++D+ F ++KE I P TY +++ L G+ E+A L EM R G+ P
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
++YN Y + D A + +M G +PT TY LL+ K + +E+
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF-NPTLLTYNALLKGLSKNQEGELAEEL 594
Query: 397 WRDMKESGVGPD 408
R+MK G+ P+
Sbjct: 595 LREMKSEGIVPN 606
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
R + +A + F M+E+G P + + +L + SR ++ + + + M I V T+
Sbjct: 169 RMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTF 228
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
+I L G+L+ A+G M G+ P VTYN + + R + A + +MK
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
G P TY +L G E+ R+MKE G+ PD Y +LI G
Sbjct: 289 KGF-QPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQL 486
A + EM+++G +P T+ TL GL + + L +++ E+ I S N +
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI 404
Query: 487 KPY 489
Y
Sbjct: 405 NGY 407
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 28/236 (11%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT--TSEH 154
L ++++LI+ + A+ L EM + P T+ LI L KT E
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 155 F---------------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
F L+D C G + A + NPD Y L+ G C
Sbjct: 455 FEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK-EMDMMSINPDDVTYNCLMRGLC 513
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
G+ E A+ + EM RGI+P+ ++YN L++G +K + A V DEM
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK----------GDTKHAFMVRDEM 563
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
G P + +++ +L S+ + +L+ + R MK +GI P +++ SVI+ +++
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 166/379 (43%), Gaps = 46/379 (12%)
Query: 114 QFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAE 173
+++ A+ +I EM + P+ ST+ + +L+ LC ++LA
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTY------------------SKVLNYLCNASKMELAFL 504
Query: 174 VFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV 233
+F KR DV YT+++ +CK G +E A+ + NEM E G PNVVTY L++
Sbjct: 505 LFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 234 CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF-R 292
+ + + A+++F+ M G P++ ++S ++ + +A + + + F R
Sbjct: 564 LKA----------KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 293 MMKEQGIC---------------PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
M + + P V TY +++ R+E+A L D M G P
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
+ Y+ D A ++ +M E G T +TY L+ + K + ++
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF-PATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
M E+ P++ +YT +I GLC+ K EA + M EKG P VT+ + G
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 458 DMLRTWRRLKKKLDEESIS 476
+ T L +++ + ++
Sbjct: 793 GKIETCLELLERMGSKGVA 811
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 182/456 (39%), Gaps = 107/456 (23%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH------ 154
++ +++D+ K + A + EM + TPN T+ LI + K + +
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 155 -----------FTVLLDTLCKYGYVKLAAEVFNGNKRHC--RFNPDVKMY---------- 191
++ L+D CK G V+ A ++F +R C + PDV MY
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIF---ERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 192 ------TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
L+ G+CK RVE A+ L+ M G EPN + Y+ L++G+C+ L +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 246 ERTIRD-------------------------ADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
+ + + A KV +M E P+V ++ ++ +
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
K + +MM+E+G P V TYT++I G++E L + M GV+P VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK--ADMIGVVKEIWR 398
Y D A L ++MK+ + TA Y +++ F K + +G++ EI +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA-GYRKVIEGFNKEFIESLGLLDEIGQ 875
Query: 399 DMKESGVGPDLDLYTL-------------------------------------LIHGLCE 421
D P L +Y L LI LC
Sbjct: 876 D----DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCL 931
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
K A Q F EM +KG +P+ +F +L +GL ++
Sbjct: 932 ANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 48/334 (14%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC-RKVSLHPE-- 242
P K++ L++ +C G A L +MV+ G P V YN+L+ +C K SL+ +
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 243 ----------------------ERFERTIRDADK------VFDEMRERGIEPDVTSFSIV 274
F R + A K V EM +G PD +++S V
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
L+ A K +L+ F MK G+ V TYT ++ G +E A F+EM G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
+P VTY Y K A +LF+ M +G C P TY L+ KA +
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEG-CLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 395 EIWRDMKESGVGPDLDL----------------YTLLIHGLCERKKWREACQFFVEMIEK 438
+I+ M S PD+D+ Y L+ G C+ + EA + M +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 439 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
G P ++ ++ L GL + L + +K ++ E
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 147/348 (42%), Gaps = 40/348 (11%)
Query: 140 LIRRLVSDTKTTSEHFTV--LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
LI R +S + FT+ +LCK G + A + F PD YT LI G
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETEN----FVPDTVFYTKLISG 311
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV--------CRKV-------SLHPE 242
C+ E A FLN M PNVVTY+ LL G C++V +P
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 243 ERFERTIRD----------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD--- 289
+ ++ A K+ +M + G P ++I++ K L+ D
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC-GDKDSLNCDLLD 430
Query: 290 ----KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFF 345
+ M G+ +S +CL S G+ E A + EM+ G P TY+
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 346 KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
+ A LF++MK GL + +TY +++ F KA +I ++ + +M+E G
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADV-YTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 406 GPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
P++ YT LIH + KK A + F M+ +G LP VT+ L G
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 152/382 (39%), Gaps = 65/382 (17%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ L+D K + + A +L+ M PN ++V D L+D
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN---------QIVYDA---------LID 682
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LCK G + A EV H F + Y+ LI + K+ R + A L++M+E
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEH-GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNVV Y +++G+C KV E A K+ M E+G +P+V +++ ++ +
Sbjct: 742 PNVVIYTEMIDGLC-KVGKTDE---------AYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE----------------- 323
K + L+ M +G+ P TY +I G L+ A
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 324 ----------------GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE- 366
GL DE+ + +P Y + + AL+L +++
Sbjct: 852 YRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATF 911
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
+ TY L++ A+ + +++ +M + GV P++ + LI GL K
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKIS 971
Query: 427 EACQF--FVEMIEKGFLPQKVT 446
EA F+ +E ++ +K T
Sbjct: 972 EALLLLDFISHMEIQWIEEKKT 993
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 52/270 (19%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF 155
P + ++ LID KV++ DLA +++++M + S PN V+I +
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN-----VVI-------------Y 747
Query: 156 TVLLDTLCKYGYVKLAAEVFN-GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
T ++D LCK G A ++ ++ C+ P+V YT +I G+ +G++ET L M
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQ--PNVVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPE-----------------------ERFERTIRD 251
+G+ PN VTY VL++ C+ +L E F + +
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIE 865
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG-----ICPTVATY 306
+ + DE+ + P ++ + +++ +A + +++L R+++E + +TY
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL---RLLEEVATFSATLVDYSSTY 922
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
S+I+ L ++E A LF EM + GV P
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 107/294 (36%), Gaps = 29/294 (9%)
Query: 192 TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD 251
VL+ C+ G A L + + P+ TYN L+ + L R +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 252 ADKVFDEMRER----------------------GIEPDVTSFSIVLHVYSRAHKPQLSLD 289
A+ D R PD ++ ++ A + ++D
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
M+ P V TY++++ + +L + + + M+ G P +N Y
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF------LKADMIGVVKEIWRDMKES 403
D A KL KKM + G P Y +L+ L D++ + ++ + +M +
Sbjct: 384 TSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
GV + + LC K+ +A EMI +GF+P T+ + L +
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 15/291 (5%)
Query: 138 LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
L L+ R+V + + + +++ LCK G + A + + V +Y +I
Sbjct: 30 LALVDRMVEEGH---QPYGTIINGLCKMGDTESALNLLS-KMEETHIKAHVVIYNAIIDR 85
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
CK G AQ+ EM ++GI P+V+TY+ +++ CR R+ DA+++
Sbjct: 86 LCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS------GRW----TDAEQLLR 135
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
+M ER I PDV +FS +++ + K + + + M +GI PT TY S+I
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
RL DA+ + D M SP VT++ Y K D+ +++F +M G+ + T TY
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV-TY 254
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
L+ F + + +++ M SGV P+ + ++ LC +K+ R+A
Sbjct: 255 TTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 53/303 (17%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
FT L++ LC G V A + + + Y +I G CK+G E+A + L++M
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDR-----MVEEGHQPYGTIINGLCKMGDTESALNLLSKM 67
Query: 215 VERGIEPNVVTYNVLLNGVCRKVS-LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
E I+ +VV YN +++ +C+ +H A +F EM ++GI PDV ++S
Sbjct: 68 EETHIKAHVVIYNAIIDRLCKDGHHIH-----------AQNLFTEMHDKGIFPDVITYSG 116
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
++ + R+ + + R M E+ I P V T++++I L G++ +AE ++ +M+R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+ P +TYN DG C K D +
Sbjct: 177 IFPTTITYNSMI---------------------DGFC---------------KQDRLNDA 200
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
K + M PD+ ++ LI+G C+ K+ + F EM +G + VT+ TL G
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 454 LIQ 456
Q
Sbjct: 261 FCQ 263
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 28/286 (9%)
Query: 98 SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT------- 150
H + +I+ + K+ + A L+++M++ + + + +I RL D
Sbjct: 40 GHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLF 99
Query: 151 TSEH----------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
T H ++ ++D+ C+ G A ++ + NPDV ++ LI K
Sbjct: 100 TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER-QINPDVVTFSALINALVK 158
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
G+V A+ +M+ RGI P +TYN +++G C++ L+ DA ++ D M
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN----------DAKRMLDSMA 208
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+ PDV +FS +++ Y +A + ++ F M +GI TYT++I G L+
Sbjct: 209 SKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 268
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
A+ L + M+ SGV+P +T+ +K+ A + + +++
Sbjct: 269 AAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 29/232 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ +ID+ + ++ A QL+ +M +R + P+ TF LI LV
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV--------------- 157
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
K G V A E++ R F P Y +I G+CK R+ A+ L+ M +
Sbjct: 158 ---KEGKVSEAEEIYGDMLRRGIF-PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS 213
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+VVT++ L+NG C+ + + + ++F EM RGI + +++ ++H + +
Sbjct: 214 PDVVTFSTLINGYCKA----------KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 263
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
+ D +M G+ P T+ S++ L S L A + +++ +S
Sbjct: 264 VGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M E G PDV +F+ +++ + +L M E+G P Y ++I L G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
E A L +M + + V YN A LF +M + G+ P TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI-FPDVITYS 115
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
++ F ++ +++ RDM E + PD+ ++ LI+ L + K EA + + +M+ +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 439 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
G P +T+ ++ G + D L +R+ + +S S
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS 213
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 30/350 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ I ++ +++D AW++ MD+ ++ P+ T +LI L ++ E + + +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF-EK 334
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
+ + G VK + +VF G L+ +C G E A EM ++GI
Sbjct: 335 MSEKG-VKWSQDVFGG----------------LVKSFCDEGLKEEALVIQTEMEKKGIRS 377
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
N + YN L++ + S H EE + +F EMR++G++P +++I++ Y+R
Sbjct: 378 NTIVYNTLMDAYNK--SNHIEE--------VEGLFTEMRDKGLKPSAATYNILMDAYARR 427
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED-AEGLFDEMVRSGVSPCAVT 340
+P + R M++ G+ P V +YT +I ++ D A F M + G+ P + +
Sbjct: 428 MQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHS 487
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y Y + A F++M ++G+ P+ TY +L F ++ G + EIW+ M
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGI-KPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ Y L+ G ++ + EA E + G P +T+ L
Sbjct: 547 LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 136/328 (41%), Gaps = 48/328 (14%)
Query: 104 LLIDTMAKV-RQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD--------------- 147
+LI T+ K R W++ +M ++ + + F L++ +
Sbjct: 313 ILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEK 372
Query: 148 --TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
++ + + L+D K +++ +F R P Y +L+ + + + +
Sbjct: 373 KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFT-EMRDKGLKPSAATYNILMDAYARRMQPD 431
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCR----------------KVSLHPEERFERTI 249
++ L EM + G+EPNV +Y L++ R KV L P +
Sbjct: 432 IVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTAL 491
Query: 250 RDADKV----------FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
A V F+EM + GI+P V +++ VL + R+ ++ +++M + I
Sbjct: 492 IHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY-RGRKDADSAL 358
T TY +++ A G +A + E + G+ P +TYN Y RG +DA
Sbjct: 552 KGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLP- 610
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
+L K+M L P + TY ++ F++
Sbjct: 611 QLLKEMAALNL-KPDSITYSTMIYAFVR 637
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 98 SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR-----RLVSDT---- 148
S +++++L+D A+ Q D+ L+ EM+ L PN ++ LI + +SD
Sbjct: 413 SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA 472
Query: 149 ---------KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR--FNPDVKMYTVLIYG 197
K +S +T L+ G+ + A F + C+ P V+ YT ++
Sbjct: 473 FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF---EEMCKEGIKPSVETYTSVLDA 529
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ + G M+ I+ +TYN LL+G ++ L+ E R V
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ-GLYIEAR---------DVVS 579
Query: 258 EMRERGIEPDVTSFSIVLHVYSR----AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
E + G++P V +++++++ Y+R A PQL + M + P TY+++I
Sbjct: 580 EFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQL----LKEMAALNLKPDSITYSTMIYAF 635
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ A MV+SG P +Y
Sbjct: 636 VRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 146/307 (47%), Gaps = 16/307 (5%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T+L+DTLCK V A EV K +P+V Y+ LI G CK GR+ A+ L+EM
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMD 110
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
+ I PNV+T++ L++ ++ L D V+ M + I+P+V ++S ++
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSK----------VDSVYKMMIQMSIDPNVFTYSSLI 160
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
+ ++ ++ +M +G P V TY+++ R++D L D+M + GV+
Sbjct: 161 YGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA 220
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
V+ N K Y D AL +F M +GL P +Y ++L +
Sbjct: 221 ANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLI-PNIRSYNIVLAGLFANGEVEKALS 279
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM----IEKGFLPQKVTFETLY 451
+ M+++ D+ YT++IHG+C+ +EA F ++ +E F + L
Sbjct: 280 RFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 339
Query: 452 RGLIQSD 458
R ++++
Sbjct: 340 RAGMRTE 346
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 20/317 (6%)
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
L++ C +K A V G DV + T+LI CK V A L M +R
Sbjct: 19 LVNGFCLSNSIKDAVYV-AGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 77
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHV 277
GI PNVVTY+ L+ G+C+ L DA++ EM + I P+V +FS ++
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLA----------DAERRLHEMDSKKINPNVITFSALIDA 127
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
Y++ K ++MM + I P V TY+S+I L R+++A + D M+ G +P
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 338 AVTY----NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
VTY N FFK R D +KL M + G+ + T + L++ + +A I +
Sbjct: 188 VVTYSTLANGFFKSSR----VDDGIKLLDDMPQRGVAANTV-SCNTLIKGYFQAGKIDLA 242
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
++ M +G+ P++ Y +++ GL + +A F M + +T+ + G
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 454 LIQSDMLRTWRRLKKKL 470
+ ++ M++ L KL
Sbjct: 303 MCKACMVKEAYDLFYKL 319
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 46/277 (16%)
Query: 213 EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFS 272
+M++ GIEP++VT + L+NG C +I+DA V +M + GI+ DV +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFC----------LSNSIKDAVYVAGQMEKMGIKRDVVVDT 52
Query: 273 IVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
I++ + +L+ + MK++GI P V TY+S+I L GRL DAE EM
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGV 392
++P +T++ Y R G S Y +++QM
Sbjct: 113 KINPNVITFSALIDAYAKR----------------GKLSKVDSVYKMMIQM--------- 147
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
+ P++ Y+ LI+GLC + EA + MI KG P VT+ TL
Sbjct: 148 -----------SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 196
Query: 453 GLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
G +S + +L + + ++ + N +K Y
Sbjct: 197 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 144/342 (42%), Gaps = 64/342 (18%)
Query: 104 LLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-------------RRLVS-DTK 149
+LIDT+ K R A +++ M R ++PN T+ LI RRL D+K
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 150 TTSEH---FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVET 206
+ + F+ L+D K G + V+ +P+V Y+ LIYG C RV+
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYK-MMIQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Query: 207 AQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
A L+ M+ +G PNVVTY+ L NG + + D K+ D+M +RG+
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFK----------SSRVDDGIKLLDDMPQRGVAA 221
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
+ S + ++ Y +A K L+L F M G+ P + +Y V+ L + G +E A F
Sbjct: 222 NTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRF 281
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
+ M ++ R D D TY +++ K
Sbjct: 282 EHMQKT------------------RNDLDII------------------TYTIMIHGMCK 305
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
A M+ +++ +K V PD YT++I L EA
Sbjct: 306 ACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 45/338 (13%)
Query: 148 TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTV-------------- 193
K + F ++ G + + +F +R P+ +YT+
Sbjct: 101 NKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKC 160
Query: 194 ---------------------LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNG 232
LI + + GR ET+ L+ M I P+++TYN ++N
Sbjct: 161 LEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN- 219
Query: 233 VCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFR 292
C + L E +F EMR GI+PD+ +++ +L + + FR
Sbjct: 220 ACARGGLDWEGLL--------GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 293 MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRK 352
M + GI P + TY+ +++ RLE L EM G P +YN + Y
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 353 DADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLY 412
A+ +F +M+ G C+P A+TY VLL +F ++ V++++ +MK S PD Y
Sbjct: 332 SIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY 390
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+LI E ++E F +M+E+ P T+E +
Sbjct: 391 NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 169/405 (41%), Gaps = 37/405 (9%)
Query: 92 LPNPPLSHS--SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTK 149
+P+ +S S S+ LI+ + +++ + +L+ M ++P+ T+ +I
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG- 225
Query: 150 TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQS 209
L G + L AE+ RH PD+ Y L+ G + A+
Sbjct: 226 ------------LDWEGLLGLFAEM-----RHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 210 FLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD---EMRERGIEP 266
M + GI P++ TY+ H E F + +R +KV D EM G P
Sbjct: 269 VFRTMNDGGIVPDLTTYS------------HLVETFGK-LRRLEKVCDLLGEMASGGSLP 315
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
D+TS++++L Y+++ + ++ F M+ G P TY+ ++ GR +D LF
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
EM S P A TYN + + + LF M E+ + P TY ++ K
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI-EPDMETYEGIIFACGK 434
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+ ++I + M + + P YT +I + + EA F M E G P T
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYRR 491
F +L + +++ + +L + I + N Q++ Y++
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQ 539
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 166/390 (42%), Gaps = 35/390 (8%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
+S+++L++ AK A + +M TPN +T+ +VLL
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY------------------SVLL 359
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+ + G ++F + +PD Y +LI + + G + + ++MVE I
Sbjct: 360 NLFGQSGRYDDVRQLFL-EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
EP++ TY ++ C K LH DA K+ M I P +++ V+ +
Sbjct: 419 EPDMETYEGIIF-ACGKGGLH---------EDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+A + +L F M E G P++ T+ S++ A G ++++E + +V SG+
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
T+N + Y+ + A+K + M E C P T +L ++ A ++ +E + +
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDM-EKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
MK S + P + Y +++ + ++W + + EM+ + +G D
Sbjct: 588 MKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDD- 646
Query: 460 LRTWRRLK---KKLDEESISFGSEFQNYQL 486
W+ ++ KL+ E G F N L
Sbjct: 647 -SNWQIVEYVLDKLNSEGCGLGIRFYNALL 675
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
+VFDEM +G+ V S++ +++ Y R + + SL+ MK + I P++ TY +VI
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 314 ASCG-RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
A G E GLF EM G+ P VTYN R D A +F+ M + G+ P
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIV-P 280
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
TY L++ F K + V ++ +M G PD+ Y +L+ + +EA F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
+M G P T+ L QS R+L
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
+P+ ++I++ + R L+ F M QG+ +V +YT++I GR E +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 325 LFDEMVRSGVSPCAVTYNCFFKE-YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
L D M +SP +TYN RG D + L LF +M+ +G+ P TY LL
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI-QPDIVTYNTLLSA 256
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+ + ++R M + G+ PDL Y+ L+ + ++ + C EM G LP
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 444 KVTFETLYRGLIQSDMLR 461
++ L +S ++
Sbjct: 317 ITSYNVLLEAYAKSGSIK 334
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 28/360 (7%)
Query: 113 RQFDLAWQLITEMDQRSLTPNPSTFLVLI-----------------RRLVSDTKTTSEHF 155
+ DLA + + + ++ L PN T+ +LI S+ + +
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
+++ LCK G A E+ R Y +I G+ K G +++A + EM
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
GI PNV+TY L+NG+C+ R ++ + ++ DEM+ +G++ D+ ++ ++
Sbjct: 612 GNGISPNVITYTSLMNGLCKN------NRMDQAL----EMRDEMKNKGVKLDIPAYGALI 661
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
+ + + + F + E+G+ P+ Y S+I + G + A L+ +M++ G+
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
TY + A +L+ +M+ GL P Y V++ K V +
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV-PDEIIYTVIVNGLSKKGQFVKVVK 780
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
++ +MK++ V P++ +Y +I G EA + EM++KG LP TF+ L G +
Sbjct: 781 MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQV 840
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 191/414 (46%), Gaps = 39/414 (9%)
Query: 103 HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF-----------------LVLIRRLV 145
+ ++ + K + D A +L+++M+ R + PN ++ +V L
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 146 SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
K + +++L+D + + A EV N + + +Y +I G CK+G+
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVN-HMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 206 TAQSFLNEMVE-RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
A+ L M+E + + + ++YN +++G + E + A ++EM GI
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFK----------EGEMDSAVAAYEEMCGNGI 615
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
P+V +++ +++ + ++ +L+ MK +G+ + Y ++I +E A
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL-CSPTAHTYGVLLQM 383
LF E++ G++P YN +R + +AL L+KKM +DGL C TY L+
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD--LGTYTTLIDG 733
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
LK + + E++ +M+ G+ PD +YT++++GL ++ ++ + + F EM + P
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Query: 444 KVTFETLYRGLIQSDMLRTWRRLKKK-LDEESISFGSEF------QNYQLKPYR 490
+ + + G + L RL + LD+ + G+ F Q L+P R
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVR 847
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 163/412 (39%), Gaps = 70/412 (16%)
Query: 82 ALSLFN-YAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
AL LF+ K P+P + +F +LI+ K + + A + +M+ LTP+ +
Sbjct: 358 ALVLFDKMEKEGPSP--NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW-C 199
I+ + K E L D + G A VF N I W C
Sbjct: 416 IQGWLKGQK--HEEALKLFDESFETGL----ANVFVCNT---------------ILSWLC 454
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
K G+ + A L++M RGI PNVV+YN ++ G CR ++ + A VF +
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR----------QKNMDLARIVFSNI 504
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
E+G++P+ ++SI++ R H Q +L+ M I Y ++I L G+
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
A L M+ +E LC + +Y
Sbjct: 565 SKARELLANMI----------------------------------EEKRLCV-SCMSYNS 589
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
++ F K + + +M +G+ P++ YT L++GLC+ + +A + EM KG
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 440 FLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYRR 491
+ L G + + + L +L EE ++ N + +R
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 144/335 (42%), Gaps = 12/335 (3%)
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
VL R + + S +++ + CK + +A + K P + YT +I
Sbjct: 255 VLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILAS 314
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
K G ++ A +EM+ GI NVV L+ G C+ L A +FD+
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL----------VSALVLFDK 364
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M + G P+ +FS+++ + + + + +L+ ++ M+ G+ P+V ++I+ +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
E+A LFDE +G++ V N + D A +L KM+ G+ P +Y
Sbjct: 425 HEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKMESRGI-GPNVVSYN 482
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
++ + + + + ++ ++ E G+ P+ Y++LI G + A + M
Sbjct: 483 NVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS 542
Query: 439 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 473
V ++T+ GL + R L + EE
Sbjct: 543 NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 176/458 (38%), Gaps = 98/458 (21%)
Query: 76 KHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKV-----RQFDLAWQLITEMDQRSL 130
+++ + AL +N+A+ F +LI + R DL + ++
Sbjct: 83 RNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYVS------- 135
Query: 131 TPNPSTFL-VLIRRLVSDTKT-----TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
T NP+ VL+ +LV K+ S F LL+ K A ++ N
Sbjct: 136 TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVN-QMLELDV 194
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER 244
P + + + A+ + MV G++ + VT +L+ + SL E+
Sbjct: 195 IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLM-----RASLREEKP 249
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC-PTV 303
E A +V ERG EPD +S+ + + ++ R MKE+ +C P+
Sbjct: 250 AE-----ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304
Query: 304 ATYTSVIKCLASCGRLEDA---------EG--------------------------LFDE 328
TYTSVI G ++DA +G LFD+
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL-------- 380
M + G SP +VT++ + +R + + AL+ +KKM+ GL H + ++
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 381 ----LQMFLKADMIGVVK---------------------EIWRDMKESGVGPDLDLYTLL 415
L++F ++ G+ E+ M+ G+GP++ Y +
Sbjct: 425 HEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 416 IHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ G C +K A F ++EKG P T+ L G
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 46/277 (16%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S++ +ID K + D A EM ++PN T+ T L++
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY------------------TSLMN 627
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LCK + A E+ + K D+ Y LI G+CK +E+A + +E++E G+
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 221 PNVVTYNVLLNGVCRKVS--LHPEERFERTIRD------------------------ADK 254
P+ YN L++G R + + + +++ ++D A +
Sbjct: 687 PSQPIYNSLISGF-RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
++ EM+ G+ PD ++++++ S+ + + F MK+ + P V Y +VI
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGR 351
G L++A L DEM+ G+ P T++ G
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 177/406 (43%), Gaps = 53/406 (13%)
Query: 83 LSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR 142
LS + +LP+P + H LI++ + L+ + + + R TP+ S+F
Sbjct: 9 LSRLRKSSNLPDPFTCNKHIHQLINSNCGI----LSLKFLAYLVSRGYTPHRSSF----- 59
Query: 143 RLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH-CRFNPDVKMYTVLIYGWCKL 201
++ +CK G VK A ++ + R C PDV Y LI G C+
Sbjct: 60 -------------NSVVSFVCKLGQVKFAEDIVHSMPRFGCE--PDVISYNSLIDGHCRN 104
Query: 202 GRVETAQSFLNEM-VERGI--EPNVVTYNVLLNGVCRKVSL--------------HPEER 244
G + +A L + G +P++V++N L NG + L P
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVV 164
Query: 245 FERTIRD----------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
T D A K F M+ + P+V +F+ ++ Y +A ++++ ++ M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
+ + V TYT++I G ++ AE ++ MV V P ++ Y + R D+
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
D+A+K KM G+ YGV++ + EI DM++S + PD+ ++T
Sbjct: 285 DNAMKFLAKMLNQGM-RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
+++ + + + A + ++IE+GF P V T+ G+ ++ L
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 171/387 (44%), Gaps = 37/387 (9%)
Query: 106 IDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKY 165
IDT K + LA + M + +L+PN TF T L+D CK
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTF------------------TCLIDGYCKA 211
Query: 166 GYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVT 225
G +++A ++ R R + +V YT LI G+CK G ++ A+ + MVE +EPN +
Sbjct: 212 GDLEVAVSLYK-EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV 270
Query: 226 YNVLLNGVCRKVSLHPEERFERTIRD-ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
Y +++G F+R D A K +M +G+ D+T++ +++ K
Sbjct: 271 YTTIIDGF-----------FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
+ + + M++ + P + +T+++ GR++ A ++ +++ G P V +
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 345 FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
A+ F K + + Y VL+ K V+ ++ + E+G
Sbjct: 380 IDGIAKNGQLHEAIVYFCIEKANDV------MYTVLIDALCKEGDFIEVERLFSKISEAG 433
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
+ PD +YT I GLC++ +A + M+++G L + + TL GL ++ R
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEAR 493
Query: 465 RLKKKLDEESISFGSEFQNYQLKPYRR 491
++ ++ IS S + ++ Y +
Sbjct: 494 QVFDEMLNSGISPDSAVFDLLIRAYEK 520
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 151/335 (45%), Gaps = 45/335 (13%)
Query: 80 KIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV 139
++A+SL+ + + L+ ++ LID K + A ++ + M + + PN +
Sbjct: 215 EVAVSLYKEMRRV-RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 140 LI-----------------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHC 182
+I + L + + V++ LC G +K A E+ ++
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS- 332
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
PD+ ++T ++ + K GR++ A + ++++ERG EP+VV + +++G+ + LH
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Query: 243 ERF--------------------ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAH 282
+ E + +++F ++ E G+ PD F +
Sbjct: 393 IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD--KFMYTSWIAGLCK 450
Query: 283 KPQLSLDKFRM---MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ L +D F++ M ++G+ + YT++I LAS G + +A +FDEM+ SG+SP +
Sbjct: 451 QGNL-VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
++ + Y + +A L M+ GL + +
Sbjct: 510 VFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 71/170 (41%), Gaps = 15/170 (8%)
Query: 149 KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ 208
K +TVL+D LCK G +F+ PD MYT I G CK G + A
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFS-KISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
MV+ G+ +++ Y L+ G+ K L E R +VFDEM GI PD
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASK-GLMVEAR---------QVFDEMLNSGISPDS 508
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
F +++ Y + + D M+ +G+ T S C CG
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGL----VTAVSDADCSKQCGN 554
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 5/217 (2%)
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
RG P +SF+ V+ + + + + D M G P V +Y S+I G +
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 322 AEGLFDEMVRSG---VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
A + + + S P V++N F + K D M + CSP TY
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYS 167
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
+ F K+ + + + + MK + P++ +T LI G C+ A + EM
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 439 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
VT+ L G + ++ + ++ E+ +
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 145/352 (41%), Gaps = 66/352 (18%)
Query: 103 HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTL 162
+LL+ + K + A++++ E+ L PN T+ ++ V+ + E +L+ +
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA--RGDMESAKRVLEEM 252
Query: 163 CKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPN 222
G+ PD YTVL+ G+CKLGR A + +++M + IEPN
Sbjct: 253 LDRGWY-----------------PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN 295
Query: 223 VVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAH 282
VTY V++ +C+ E+ +A +FDEM ER PD + V+ H
Sbjct: 296 EVTYGVMIRALCK----------EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDH 345
Query: 283 KPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYN 342
K + +R M + P A +++I L GR+ +A LFDE + + P +TYN
Sbjct: 346 KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYN 404
Query: 343 CFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
G+C T +W DM E
Sbjct: 405 TLIA---------------------GMCEKGELTEA---------------GRLWDDMYE 428
Query: 403 SGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
P+ Y +LI GL + +E + EM+E G P K TF L+ GL
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 187/422 (44%), Gaps = 42/422 (9%)
Query: 76 KHHSKIALSLFNYA-KSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTP-- 132
+ + +AL +F YA KS P ++ ++H ++ +++ R FD L+ ++ + S P
Sbjct: 59 QQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADL-RNSYPPIK 117
Query: 133 -NPSTFLVLIRRL---------------VSD--TKTTSEHFTVLLDTLCKYGYVKLAAEV 174
+ F+ L+R + D K + LL+ L + L +
Sbjct: 118 CGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAM 177
Query: 175 FNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC 234
F +K P++ +L+ CK +E+A L+E+ G+ PN+VTY +L G
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 235 RKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
+ + A +V +EM +RG PD T++++++ Y + + + M
Sbjct: 238 ARGDME----------SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP----CAVTYNCFFKEYRG 350
++ I P TY +I+ L + +A +FDEM+ P C + ++++
Sbjct: 288 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK- 346
Query: 351 RKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLD 410
D A L++KM ++ C P L+ K + ++++ D E G P L
Sbjct: 347 ---VDEACGLWRKMLKNN-CMPDNALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIPSLL 401
Query: 411 LYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
Y LI G+CE+ + EA + + +M E+ P T+ L GL ++ ++ R+ +++
Sbjct: 402 TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Query: 471 DE 472
E
Sbjct: 462 LE 463
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 12/287 (4%)
Query: 190 MYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 249
++ L+ + GR E++ + + G++ +V + N LLN L +RF+
Sbjct: 122 LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLN------VLIQNQRFDLV- 174
Query: 250 RDADKVFDEMRER-GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+F +E GI P++ + ++++ + + + + + G+ P + TYT+
Sbjct: 175 ---HAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT 231
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
++ + G +E A+ + +EM+ G P A TY Y A + M+++
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
+ P TYGV+++ K G + ++ +M E PD L +I LCE K EA
Sbjct: 292 I-EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEA 350
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
C + +M++ +P TL L + + R+L + ++ SI
Sbjct: 351 CGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI 397
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 165/375 (44%), Gaps = 29/375 (7%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F+ +I+ ++ D A ++ +M + P STF LI+ K E + LLD
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL--EESSRLLDM 449
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
+ L E+ N R C +L+ WC ++E A + + +M G++P
Sbjct: 450 M-------LRDEMLQPNDRTC---------NILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
+VVT+N L R S T D + M ++P+V + +++ Y
Sbjct: 494 DVVTFNTLAKAYARIGS---------TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
K + +L F MKE G+ P + + S+IK + ++ + D M GV P VT+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
+ + D +++ M E G+ P H + +L + + +A ++I M+
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGI-DPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE-KGFLPQKVTFETLYRGLIQSDML 460
+ GV P++ +YT +I G C + ++A Q + +M G P T+ETL G ++
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 723
Query: 461 RTWRRLKKKLDEESI 475
L K ++ +++
Sbjct: 724 WKAEELLKDMEGKNV 738
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 34/319 (10%)
Query: 103 HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTL 162
++L+ R+ + AW ++ +M + P+ TF L + T + ++ L
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 163 CKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPN 222
H + P+V+ ++ G+C+ G++E A F M E G+ PN
Sbjct: 524 ------------------HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 223 VVTYNVLLNGVCRKVSLHPEERFERTIRDAD---KVFDEMRERGIEPDVTSFSIVLHVYS 279
+ +N L+ G I D D +V D M E G++PDV +FS +++ +S
Sbjct: 566 LFVFNSLIKGFL-------------NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ + + M E GI P + ++ + K A G E AE + ++M + GV P V
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
Y + + A++++KKM SP TY L+ F +A +E+ +D
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Query: 400 MKESGVGPDLDLYTLLIHG 418
M+ V P L+ G
Sbjct: 733 MEGKNVVPTRKTMQLIADG 751
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 14/276 (5%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
DV+ T L+ G + GR + A S N ++E G +P+++TY L+ + R+ H
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFH------ 371
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
+ ++ + G++PD F+ +++ S + ++ F MKE G PT +T+
Sbjct: 372 ----SLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTF 427
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSG-VSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
++IK G+LE++ L D M+R + P T N + + ++ + A + KM+
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKE-IWRDMKESGVGPDLDLYTLLIHGLCERKK 424
G+ P T+ L + + + ++ I M + V P++ +++G CE K
Sbjct: 488 SYGV-KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQ-SDM 459
EA +FF M E G P F +L +G + +DM
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM 582
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 113/290 (38%), Gaps = 69/290 (23%)
Query: 209 SFLNEMVERGIEPNV---VTYNVLLNGVCRKVSLHP---EERFERTIRDADKVFDEMRER 262
S + ++ R ++PN +T +L V K P EE+ E + D + VF + E
Sbjct: 239 SGVKNLIVRILDPNPMTRITIPEILEDVWFKKDYKPAVFEEKKEANLADVEAVFKDSEEG 298
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
++ + SF V+ C V + T ++ L GR ++A
Sbjct: 299 RVQ--LRSFPCVICSGGTT------------------CGDVRSRTKLMNGLIERGRPQEA 338
Query: 323 EGLFDEMVRSGVSPCAVTY-----------------------------------NCFFKE 347
+F+ ++ G P +TY N
Sbjct: 339 HSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINA 398
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR--DM--KES 403
+ D A+K+F+KMKE G C PTA T+ L++ + K IG ++E R DM ++
Sbjct: 399 SSESGNLDQAMKIFEKMKESG-CKPTASTFNTLIKGYGK---IGKLEESSRLLDMMLRDE 454
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ P+ +L+ C ++K EA +M G P VTF TL +
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 174/399 (43%), Gaps = 34/399 (8%)
Query: 94 NPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPN--------------PSTFLV 139
+PP S + F + + + +A Q+ +M + L PN PS+F +
Sbjct: 126 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 185
Query: 140 LIRRLVSD------TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTV 193
R V D + F VL++ C G ++ A + + NPD Y
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
++ K GR+ + L +M + G+ PN VTYN L+ G C+ SL ++A
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL----------KEAF 295
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
++ + M++ + PD+ +++I+++ A + L+ MK + P V TY ++I
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPT 373
G +A L ++M GV VT+N K + ++ + K++ + SP
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
TY L++ +LK + E+ R+M + G+ + ++ LC+ +K EA
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 434 EMIEKGFLPQKVTFETLYRGLIQSD----MLRTWRRLKK 468
++GF+ +VT+ TL G + + L W +KK
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
F+PD+ Y LI + K+G + A + EM ++GI+ N +T N +L+ +C+
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK-------- 463
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
ER + +A + + +RG D ++ ++ + R K + +L+ + MK+ I PTV
Sbjct: 464 --ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
+T+ S+I L G+ E A FDE+ SG+ P T+N Y + A + + +
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
+ P +T +LL K M + + E D Y +I C+ K
Sbjct: 582 SIKHSF-KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDK 639
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQN 483
K +EA EM EKG P + T+ + L++ L L KK S FGS ++
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF---SGKFGSMKRD 696
Query: 484 YQLK 487
Q++
Sbjct: 697 LQVE 700
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 129/303 (42%), Gaps = 44/303 (14%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P ++ + + + G+ A +M+ ++PN++T N LL G+ R S
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPS------- 181
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
+I A +VFD+M + G+ +V +F+++++ Y
Sbjct: 182 SFSISSAREVFDDMVKIGVSLNVQTFNVLVNGY--------------------------- 214
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRS-GVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
CL G+LEDA G+ + MV V+P VTYN K + +L M
Sbjct: 215 ------CLE--GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
K++GL P TY L+ + K + +I MK++ V PDL Y +LI+GLC
Sbjct: 267 KKNGLV-PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNY 484
RE + M P VT+ TL G + + R+L ++++ + + N
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 485 QLK 487
LK
Sbjct: 386 SLK 388
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++H LI KV A +++ EM Q+ + N T ++ L + K H LL+
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN--LLN 475
Query: 161 TLCKYGY-------------------VKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ K G+ V+ A E+++ K+ + P V + LI G C
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK-VKITPTVSTFNSLIGGLCHH 534
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G+ E A +E+ E G+ P+ T+N ++ G C+ E R E+ A + ++E +
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCK------EGRVEK----AFEFYNESIK 584
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+PD + +I+L+ + + +L+ F + E+ TV TY ++I +L++
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKE 643
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFF 345
A L EM G+ P TYN F
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFI 667
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL +++ K + P + S+F+ LI + + +LA + E+ + L P+ STF +I
Sbjct: 505 ALEMWDEMKKVKITP-TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
CK G V+ A E +N + +H F PD +L+ G CK
Sbjct: 564 L------------------GYCKEGRVEKAFEFYNESIKH-SFKPDNYTCNILLNGLCKE 604
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G E A +F N ++E E + VTYN +++ C+ ++ +++A + EM E
Sbjct: 605 GMTEKALNFFNTLIEER-EVDTVTYNTMISAFCK----------DKKLKEAYDLLSEMEE 653
Query: 262 RGIEPD 267
+G+EPD
Sbjct: 654 KGLEPD 659
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 161/385 (41%), Gaps = 59/385 (15%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF 155
P S+++LI M K + W M ++ + P+ +TF +++ + SE
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNS--QRKQGDSEGI 592
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
L D + + C P + +++ C+ G++E A LN+M+
Sbjct: 593 LKLWDKM-----------------KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 216 ERGIEPNVVTYNVLLNGVCR-------------------KVSLHPEERFERTI------R 250
I PN+ TY + L+ + K+S T+ +
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
A V +M RG PD +F+ ++H Y + +L + +M E GI P VATY ++I
Sbjct: 696 KAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 755
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
+ L+ G +++ + EM G+ P TYN + ++ ++ +M DGL
Sbjct: 756 RGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 815
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE-----RKKW 425
P TY VL+ F + +E+ ++M + GV P+ Y +I GLC+ +W
Sbjct: 816 -PKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEW 874
Query: 426 R-------EACQFFVEMI-EKGFLP 442
EA EM+ EKG++P
Sbjct: 875 NKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 147/321 (45%), Gaps = 22/321 (6%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
VL+ + CK G + A + R+ + D Y +I G C+ G + A FL+EM
Sbjct: 132 LNVLIHSFCKVGRLSFAISLL----RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
V+ GI P+ V+YN L++G C+ F R A + DE+ E ++ + +I+
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKV------GNFVR----AKALVDEISEL----NLITHTIL 233
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
L Y H + + +R M G P V T++S+I L G++ + L EM V
Sbjct: 234 LSSYYNLHAIE---EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P VTY AL L+ +M G+ Y VL+ KA + +
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLV-VYTVLMDGLFKAGDLREAE 349
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ ++ + E P++ YT L+ GLC+ A +M+EK +P VT+ ++ G
Sbjct: 350 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 455 IQSDMLRTWRRLKKKLDEESI 475
++ ML L +K++++++
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNV 430
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 30/364 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------RRLVSDT 148
+++ +I + + D A+Q ++EM + + P+ ++ LI + LV +
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 149 KTTSEHFTVLLDTLCKYGYVKL-AAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
++ T+ Y L A E + F+PDV ++ +I CK G+V
Sbjct: 223 ----SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEG 278
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI-RDADKVFDEMRERGIEP 266
L EM E + PN VTY L++ + F+ I R A ++ +M RGI
Sbjct: 279 GLLLREMEEMSVYPNHVTYTTLVDSL-----------FKANIYRHALALYSQMVVRGIPV 327
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
D+ +++++ +A + + F+M+ E P V TYT+++ L G L AE +
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
+M+ V P VTY+ Y + + A+ L +KM ED P TYG ++ K
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFK 446
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
A + E+ ++M+ GV + + L++ L + +E +M+ KG ++
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN 506
Query: 447 FETL 450
+ +L
Sbjct: 507 YTSL 510
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 175/404 (43%), Gaps = 75/404 (18%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL---------------- 144
+F +I+ + K + L+ EM++ S+ PN T+ L+ L
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 145 -VSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN--PDVKMYTVLIYGWCKL 201
V +TVL+D L K G ++ A + F K N P+V YT L+ G CK
Sbjct: 321 VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF---KMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G + +A+ + +M+E+ + PNVVTY+ ++NG +K L +A + +M +
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE----------EAVSLLRKMED 427
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+ + P+ ++ V+ +A K +++++ + M+ G+ +++ L GR+++
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Query: 322 AEGLFDEMVRSGVSPCAVTY----NCFFK------------------------EYR---- 349
+GL +MV GV+ + Y + FFK Y
Sbjct: 488 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Query: 350 -----GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK-ADMIGVVKEIWRDMKES 403
G+ AD A +K M+E G+ P T+ +++ K D G++K +W MK
Sbjct: 548 GMLKFGKVGADWA---YKGMREKGI-EPDIATFNIMMNSQRKQGDSEGILK-LWDKMKSC 602
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
G+ P L +++ LCE K EA +M+ P T+
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 163/427 (38%), Gaps = 63/427 (14%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL-----VSDTKTTSEHF 155
++ +ID + K + ++A +L EM + N L+ L + + K +
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHC----------RFNP-DVKMYTVLIYGWCKLGRV 204
TL + Y L F G R P DV Y VLI G K G+V
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
++ M E+GIEP++ T+N+++N +R + K++D+M+ GI
Sbjct: 556 GADWAY-KGMREKGIEPDIATFNIMMN----------SQRKQGDSEGILKLWDKMKSCGI 604
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY------------------ 306
+P + S +IV+ + K + ++ M I P + TY
Sbjct: 605 KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK 664
Query: 307 -----------------TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
++I L G + A + +M G P VT+N Y
Sbjct: 665 THETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF 724
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
AL + M E G+ SP TY +++ A +I V + +MK G+ PD
Sbjct: 725 VGSHVRKALSTYSVMMEAGI-SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 410 DLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKK 469
Y LI G + + + + EMI G +P+ T+ L + R L K+
Sbjct: 784 FTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Query: 470 LDEESIS 476
+ + +S
Sbjct: 844 MGKRGVS 850
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 26/324 (8%)
Query: 152 SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFL 211
S +FT+ + Y+ A ++ + P+ MY LI WC++ V A+ F
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLD-RMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF 623
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
+V + I P++ TY +++N CR P++ + +F++M+ R ++PDV ++
Sbjct: 624 EILVTKKIVPDLFTYTIMINTYCRLN--EPKQAY--------ALFEDMKRRDVKPDVVTY 673
Query: 272 SIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR 331
S++L+ P+L D R M+ + P V YT +I L+ LF +M R
Sbjct: 674 SVLLN-----SDPEL--DMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKR 726
Query: 332 SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG 391
+ P VTY K + ++ +K F P Y VL+ K +G
Sbjct: 727 REIVPDVVTYTVLLKN-KPERNLSREMKAFD-------VKPDVFYYTVLIDWQCKIGDLG 778
Query: 392 VVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLY 451
K I+ M ESGV PD YT LI C+ +EA F MIE G P V + L
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 452 RGLIQSDMLRTWRRLKKKLDEESI 475
G ++ + +L K++ E+ I
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR----RLVS------DTKTT 151
+ ++I+ + + L +M +R + P+ T+ VL++ R +S D K
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPD 760
Query: 152 SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFL 211
++TVL+D CK G + A +F+ +PD YT LI CK+G ++ A+
Sbjct: 761 VFYYTVLIDWQCKIGDLGEAKRIFD-QMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF 819
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
+ M+E G++P+VV Y L+ G CR + A K+ EM E+GI+P S
Sbjct: 820 DRMIESGVKPDVVPYTALIAGCCRN----------GFVLKAVKLVKEMLEKGIKPTKASL 869
Query: 272 SIVLHVYSRA 281
S V + +A
Sbjct: 870 SAVHYAKLKA 879
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 150/378 (39%), Gaps = 34/378 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+ + LI M + D+ E+++ L + T++++++ L + E LL
Sbjct: 184 ALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDD--KEELEKLLS 241
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
L + + + C F Y I G C + A L + + I
Sbjct: 242 RL-----------LISETRNPCVF------YLNFIEGLCLNQMTDIAYFLLQPLRDANIL 284
Query: 221 PNV----VTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
+ + Y ++ G+C +E I DA+ V +M + GI+PDV +S ++
Sbjct: 285 VDKSDLGIAYRKVVRGLC----------YEMRIEDAESVVLDMEKHGIDPDVYVYSAIIE 334
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
+ + ++D F M ++ +S+++C G +A LF E + +S
Sbjct: 335 GHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISL 394
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
V YN F + A++LF++M G+ +P Y L+ ++
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGI-APDVINYTTLIGGCCLQGKCSDAFDL 453
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+M +G PD+ +Y +L GL +EA + M +G P VT + GLI
Sbjct: 454 MIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLID 513
Query: 457 SDMLRTWRRLKKKLDEES 474
+ L + L+ +S
Sbjct: 514 AGELDKAEAFYESLEHKS 531
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 155/380 (40%), Gaps = 88/380 (23%)
Query: 147 DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG---NKRHCRFNPDVKMYTVLIYGWCKLGR 203
DT T F +++ L K G A ++FN + CR PDV +T +++ + G
Sbjct: 150 DTTT----FNIIIYCLSKLGQSSQALDLFNSMREKRAECR--PDVVTFTSIMHLYSVKGE 203
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+E ++ MV G++PN+V+YN L+ ++H A V ++++ G
Sbjct: 204 IENCRAVFEAMVAEGLKPNIVSYNALMGAY----AVHGMSG------TALSVLGDIKQNG 253
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
I PDV S++ +L+ Y R+ +P + + F MM+++ P V TY ++I S G L +A
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 324 GLFDEMVRSGVSPCAVT-----------------------------------YNCFFKEY 348
+F +M + G+ P V+ YN Y
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 349 RGRKDADSALKLF-----KKMKED---------GLCSP--------------------TA 374
+ + A+ L+ KK+K D G C T
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 433
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
Y +L + K + + I+ MK +G PD+ YT ++H +KW +AC+ F+E
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 493
Query: 435 MIEKGFLPQKVTFETLYRGL 454
M G P + L R
Sbjct: 494 MEANGIEPDSIACSALMRAF 513
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 139/303 (45%), Gaps = 15/303 (4%)
Query: 175 FNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC 234
F K C+ PD + Y LI + G+ A + +++M+ I P+ TYN L+N
Sbjct: 35 FEMQKWSCK--PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 235 RKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
+ R+A +V +M + G+ PD+ + +IVL Y + +L F +M
Sbjct: 93 SSGNW----------REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM--VRSGVSPCAVTYNCFFKEYRGRK 352
K + P T+ +I CL+ G+ A LF+ M R+ P VT+ Y +
Sbjct: 143 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 202
Query: 353 DADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLY 412
+ ++ +F+ M +GL P +Y L+ + M G + D+K++G+ PD+ Y
Sbjct: 203 EIENCRAVFEAMVAEGL-KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
T L++ ++ +A + F+ M ++ P VT+ L + L + +++++
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 473 ESI 475
+ I
Sbjct: 322 DGI 324
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 153/371 (41%), Gaps = 31/371 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-------RRLVSDTKTTSE 153
+++ LID A ++ +M+Q + PN + L+ +++ DT ++
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 154 HFTVLLDTLCKYG-----YVKLA----AEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
+ Y Y+ A A + R + D +T+LI G C++ +
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
A S+L EM + I Y+ +L + + + +A+ +F++M+ G
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSK----------QGQVTEAESIFNQMKMAGC 464
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
EPDV +++ +LH Y+ + K + + F M+ GI P +++++ G+ +
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFV 524
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
L D M + + F ++ A+ L + M + L S + +L +F
Sbjct: 525 LMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-DPYLPSLSIGLTNQMLHLF 583
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
K+ + + +++ + SGVG +L Y +L+ L WR+ + M G P
Sbjct: 584 GKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSN 643
Query: 445 VTFETLYRGLI 455
+YR +I
Sbjct: 644 ----QMYRDII 650
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
I+ N N + N + R LH + + A +F EM++ +PD ++ +++ +
Sbjct: 3 IQKNYCARNDIYNMMIR---LHARHNW---VDQARGLFFEMQKWSCKPDAETYDALINAH 56
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
RA + + +++ M I P+ +TY ++I S G +A + +M +GV P
Sbjct: 57 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL 116
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
VT+N Y+ + AL F+ MK P T+ +++ K +++
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMK-GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 399 DMKE--SGVGPDLDLYTLLIHGLCERKKWREACQ-FFVEMIEKGFLPQKVTFETL 450
M+E + PD+ +T ++H L K E C+ F M+ +G P V++ L
Sbjct: 176 SMREKRAECRPDVVTFTSIMH-LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 229
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 153/380 (40%), Gaps = 88/380 (23%)
Query: 147 DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG---NKRHCRFNPDVKMYTVLIYGWCKLGR 203
DT T F +++ L K G A ++FN + CR PDV +T +++ + G
Sbjct: 282 DTTT----FNIIIYCLSKLGQSSQALDLFNSMREKRAECR--PDVVTFTSIMHLYSVKGE 335
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+E ++ MV G++PN+V+YN L+ ++H A V ++++ G
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAY----AVHGMSG------TALSVLGDIKQNG 385
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
I PDV S++ +L+ Y R+ +P + + F MM+++ P V TY ++I S G L +A
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 324 GLFDEMVRSGVSPCAVT-----------------------------------YNCFFKEY 348
+F +M + G+ P V+ YN Y
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 349 RGRKDADSALKLFKKMK----------------------------------EDGLCSPTA 374
+ + A+ L++ M+ ED T
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 565
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
Y +L + K + + I+ MK +G PD+ YT ++H +KW +AC+ F+E
Sbjct: 566 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 625
Query: 435 MIEKGFLPQKVTFETLYRGL 454
M G P + L R
Sbjct: 626 MEANGIEPDSIACSALMRAF 645
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 139/303 (45%), Gaps = 15/303 (4%)
Query: 175 FNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC 234
F K C+ PD + Y LI + G+ A + +++M+ I P+ TYN L+N
Sbjct: 167 FEMQKWSCK--PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 235 RKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM 294
+ R+A +V +M + G+ PD+ + +IVL Y + +L F +M
Sbjct: 225 SSGNW----------REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM--VRSGVSPCAVTYNCFFKEYRGRK 352
K + P T+ +I CL+ G+ A LF+ M R+ P VT+ Y +
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 353 DADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLY 412
+ ++ +F+ M +GL P +Y L+ + M G + D+K++G+ PD+ Y
Sbjct: 335 EIENCRAVFEAMVAEGL-KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
T L++ ++ +A + F+ M ++ P VT+ L + L + +++++
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 473 ESI 475
+ I
Sbjct: 454 DGI 456
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 153/371 (41%), Gaps = 31/371 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-------RRLVSDTKTTSE 153
+++ LID A ++ +M+Q + PN + L+ +++ DT ++
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 154 HFTVLLDTLCKYG-----YVKLA----AEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
+ Y Y+ A A + R + D +T+LI G C++ +
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
A S+L EM + I Y+ +L + + + +A+ +F++M+ G
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSK----------QGQVTEAESIFNQMKMAGC 596
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
EPDV +++ +LH Y+ + K + + F M+ GI P +++++ G+ +
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFV 656
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
L D M + + F ++ A+ L + M + L S + +L +F
Sbjct: 657 LMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-DPYLPSLSIGLTNQMLHLF 715
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
K+ + + +++ + SGVG +L Y +L+ L WR+ + M G P
Sbjct: 716 GKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSN 775
Query: 445 VTFETLYRGLI 455
+YR +I
Sbjct: 776 ----QMYRDII 782
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT 248
K + VLI + G +E + M I+ N N + N + R LH +
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWM---KIQKNYCARNDIYNMMIR---LHARHNW--- 158
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+ A +F EM++ +PD ++ +++ + RA + + +++ M I P+ +TY +
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
+I S G +A + +M +GV P VT+N Y+ + AL F+ MK
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK-GA 277
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE--SGVGPDLDLYTLLIHGLCERKKWR 426
P T+ +++ K +++ M+E + PD+ +T ++H L K
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH-LYSVKGEI 336
Query: 427 EACQ-FFVEMIEKGFLPQKVTFETL 450
E C+ F M+ +G P V++ L
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNAL 361
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 175/380 (46%), Gaps = 38/380 (10%)
Query: 99 HSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTS------ 152
S L+I + ++F++AW LI +M S + FL++ R ++ + +
Sbjct: 155 QKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDI 214
Query: 153 ----------EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
E F LL LC++G+++ A E +K+ F DV+ + V++ GWC +
Sbjct: 215 MDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKK--LFPVDVEGFNVILNGWCNIW 272
Query: 203 R-VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
V A+ EM I PN +Y+ +++ + +L D+ +++DEM++
Sbjct: 273 TDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF----------DSLRLYDEMKK 322
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
RG+ P + ++ +++V +R ++ + + E+G+ P TY S+I+ L G+L+
Sbjct: 323 RGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDV 382
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
A + M+ +SP T++ F + K L++ +MK L PT T+ ++L
Sbjct: 383 ARNVLATMISENLSPTVDTFHAFLEAVNFEK----TLEVLGQMKISDL-GPTEETFLLIL 437
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
K +IW +M + + LY I GL +A + + EM KGF+
Sbjct: 438 GKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
Query: 442 P----QKVTFETLYRGLIQS 457
QK+ E +G+ +S
Sbjct: 498 GNPMLQKLLEEQKVKGVRKS 517
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 156/397 (39%), Gaps = 62/397 (15%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPST-----------------FLVLIRR 143
++ +LID + D A + + M R L PN +T F VL+
Sbjct: 252 TYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGF 311
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAE---------------VFNGN-----KRH-- 181
+ D+ + +L L K + FN K H
Sbjct: 312 MEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDL 371
Query: 182 ---CRF---------NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVL 229
CR P Y VL+ R +L +M G+ +V +YN +
Sbjct: 372 VETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAV 431
Query: 230 LNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
++ +C+ R I +A EM++RGI P++ +F+ L YS +
Sbjct: 432 IDCLCK----------ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHG 481
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
+ G P V T++ +I CL ++DA F EM+ G+ P +TYN +
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
D D ++KLF KMKE+GL SP + Y +Q F K + +E+ + M G+ PD
Sbjct: 542 STGDTDRSVKLFAKMKENGL-SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDN 600
Query: 410 DLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
Y+ LI L E + EA + F + G +P T
Sbjct: 601 FTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 167/458 (36%), Gaps = 129/458 (28%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ +ID + K DLA+ +M P+ T + +L+
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFT------------------YNILIHG 224
Query: 162 LCKYGYVKLAAEVFN-----GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
+CK G V A + GN+ P+V YT+LI G+ GRV+ A L M
Sbjct: 225 VCKKGVVDEAIRLVKQMEQEGNR------PNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI--------------------------- 249
R + PN T ++G+ R L P + FE +
Sbjct: 279 RKLNPNEATIRTFVHGIFR--CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 250 RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAH-----------------KPQ------- 285
++ + ++ ERG PD ++F+ + + H KP
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVL 396
Query: 286 ----LSLDKF-------RMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
L+ +F + M G+ +V +Y +VI CL R+E+A EM G+
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 335 SPCAVTYNCFFKEYRGRKDA-----------------------------------DSALK 359
SP VT+N F Y R D A
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
FK+M E G+ P TY +L++ +++ MKE+G+ PDL Y I
Sbjct: 517 CFKEMLEWGI-EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
C+ +K ++A + M+ G P T+ TL + L +S
Sbjct: 576 CKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSES 613
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 145/386 (37%), Gaps = 83/386 (21%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ------S 209
+VL + L + G + L+ E+ R + ++ VLI W +LG + S
Sbjct: 114 SVLGNALFRKGPLLLSMELLK-EIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQIS 172
Query: 210 FLN-----------------------------EMVERGIEPNVVTYNVLLNGVCRKVSLH 240
FL +M G +P+ TYN+L++GVC+K
Sbjct: 173 FLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK---- 228
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
+ +A ++ +M + G P+V +++I++ + A + +L + MM+ + +
Sbjct: 229 ------GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLN 282
Query: 301 PTVAT-----------------------------------YTSVIKCLASCGRLEDAEGL 325
P AT Y +V+ CL++ ++
Sbjct: 283 PNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQF 342
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
++ G P + T+N D ++F G+ P + Y VL+Q L
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV-KPGFNGYLVLVQALL 401
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
A + M G+ + Y +I LC+ ++ A F EM ++G P V
Sbjct: 402 NAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV 461
Query: 446 TFETLYRGL-IQSDMLRTWRRLKKKL 470
TF T G ++ D+ + L+K L
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKLL 487
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 1/219 (0%)
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
++ E+R+ G +++ + R + D F + G+ P+ Y +VI L
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPT 373
L+ A F +M G P TYN + D A++L K+M+++G P
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEG-NRPN 249
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
TY +L+ FL A + + M+ + P+ +HG+ +A + V
Sbjct: 250 VFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLV 309
Query: 434 EMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
+EK Q+V ++ + L + M + + +K+ E
Sbjct: 310 GFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGE 348
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 180/416 (43%), Gaps = 23/416 (5%)
Query: 44 QHHNPFHAMESSLQLHGIXXXXXXXXXXXXXXKHHSKIA---LSLFNYAKSLPNPPLSHS 100
+H N + +E++L H ++H A ++FN+A +L H
Sbjct: 55 KHSNFVNFLENNLPHHQTLTPQTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHD 114
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
SF + ++A +FD ++L++ + + P P + + F +D
Sbjct: 115 SFLWMSRSLAATHRFDDLYRLLSFV---AANPCPCSSGIF------SCPELEPIFRSAID 165
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C+ + A F+ KR P+V +Y ++ G+ K G ++ A F M + +
Sbjct: 166 AYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAK 225
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+V T+N+L+NG CR +F+ + +F EM+E+G EP+V SF+ ++ +
Sbjct: 226 PDVCTFNILINGYCR------SSKFDLAL----DLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ K + + M E G + AT ++ L GR++DA GL +++ V P
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y ++ G A A+++ +++ + G +P L++ K+ M
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQ-TPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+G+ PD + LL+ LC +A + + KG+ P + T+ L G +
Sbjct: 395 MNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 349 RGRKDADSALKLFKKMKE--DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
R RK D AL F MK DG P Y ++ ++K+ + ++ M +
Sbjct: 169 RARK-MDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAK 225
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
PD+ + +LI+G C K+ A F EM EKG P V+F TL RG + S +
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE---- 281
Query: 467 KKKLDEESISFGSEFQ 482
K+ E I G F
Sbjct: 282 GVKMAYEMIELGCRFS 297
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 155/376 (41%), Gaps = 29/376 (7%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
S +L FN+A+S P+ + + L ++A ++++ W+++ +M SL
Sbjct: 91 SNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSL-------- 142
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
+ E +++ K G+V A E+FNG + V +Y L++
Sbjct: 143 ----------DISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHAL 192
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
C + A + + M+ +G++P+ TY +L+NG C + ++A + DE
Sbjct: 193 CDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKM----------KEAQEFLDE 242
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M RG P +++ A + + + M + G P + T+ +I+ ++ G
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
+E ++ + G+ TY D A +L EDG P Y
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGH-KPFPSLYA 361
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
+++ + M + DMK P+ +YT+LI K+ +A + VEM E
Sbjct: 362 PIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEM 421
Query: 439 GFLPQKVTFETLYRGL 454
G +P F+ + GL
Sbjct: 422 GLVPISRCFDMVTDGL 437
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 2/171 (1%)
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD-ADSALK 359
PT Y + K LAS + E + +M + T CF E G+ D A++
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETL-CFIIEQYGKNGHVDQAVE 167
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
LF + + C T Y LL M + R M G+ PD Y +L++G
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
C K +EA +F EM +GF P + L GL+ + L + + + K+
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKM 278
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 164/398 (41%), Gaps = 48/398 (12%)
Query: 82 ALSLFNYAKSLPNPPLS---HSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
A SLFN + PL H+S ++A V +Q I + Q + P STFL
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILK-SQPNFRPGRSTFL 126
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
+L+ ++ + +L+ + G PD + +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNG-----------------LEPDQVTTDIAVRSL 169
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF------------- 245
C+ GRV+ A+ + E+ E+ P+ TYN LL +C+ LH F
Sbjct: 170 CETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPD 229
Query: 246 -------------ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFR 292
+ +R+A + ++ G +PD ++ ++ + K ++ ++
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYK 289
Query: 293 MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRK 352
MKE+G+ P TY ++I L+ GR+E+A MV +G P TY +
Sbjct: 290 KMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Query: 353 DADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLY 412
++ AL L ++M+ G C+P TY LL KA ++ E++ MK SGV + + Y
Sbjct: 350 ESLGALSLLEEMEARG-CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
L+ L + K EA + F ++ L + TL
Sbjct: 409 ATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 153/357 (42%), Gaps = 30/357 (8%)
Query: 90 KSLPNPPLSHSSFHLLIDTMAKVRQFDLA--WQLITEMDQRSLTPNPSTFLVLIRRL--- 144
KS PN S+F +L+ + ++ +++ M L P+ T + +R L
Sbjct: 113 KSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 172
Query: 145 --VSDTKT-----TSEH-------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKM 190
V + K T +H + LL LCK + + E + + PD+
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
+T+LI C + A ++++ G +P+ YN ++ G C +S E
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC-TLSKGSE-------- 283
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
A V+ +M+E G+EPD +++ ++ S+A + + + + M + G P ATYTS++
Sbjct: 284 -AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
+ G A L +EM G +P TYN + D ++L++ MK G+
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV- 401
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
++ Y L++ +K+ + E++ +S D Y+ L L KK +E
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKE 458
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 8/222 (3%)
Query: 249 IRDADKVFDEM--RERGIEPDVTSFSIVLHVYSRAHKPQLSLDK----FRMMKEQGICPT 302
+ D K+F + + P ++F I+L RA P S+ +M G+ P
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRA--PDSSISNVHRVLNLMVNNGLEPD 158
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
T ++ L GR+++A+ L E+ P TYN K KD +
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD 218
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+M++D P ++ +L+ + + + + +G PD LY ++ G C
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
K EA + +M E+G P ++T+ TL GL ++ + R
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 168/377 (44%), Gaps = 37/377 (9%)
Query: 98 SHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR---------RLVSDT 148
S + F L++ + A + M R +TP + LI +S
Sbjct: 308 SRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCV 367
Query: 149 KTTSEH--------FTVLLDTLCKYGYVKLAAEVFNGNKR-HCRFNPDVKMYTVLIYGWC 199
+ E ++V++ K G+ + A F+ KR H N + Y +IY C
Sbjct: 368 RKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI--YGKIIYAHC 425
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK---VF 256
+ +E A++ + EM E GI+ + Y+ +++G + D K VF
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT-------------MVADEKKGLVVF 472
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
++E G P V ++ ++++Y++ K +L+ R+MKE+G+ + TY+ +I
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
+A +F++MV+ G+ P + YN + G + D A++ K+M++ PT T
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL-RHRPTTRT 591
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
+ ++ + K+ + E++ M+ G P + + LI+GL E+++ +A + EM
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 437 EKGFLPQKVTFETLYRG 453
G + T+ + +G
Sbjct: 652 LAGVSANEHTYTKIMQG 668
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 173/402 (43%), Gaps = 59/402 (14%)
Query: 123 TEMDQRSLTPNPSTFLVLIRRLVSDTKT-TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
T MD ++ + LV+ +RL T T + L++ K G + A EV K
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
++K Y+++I G+ KL A + +MV+ G++P+V+ YN +++ C ++
Sbjct: 514 G-VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM-- 570
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
+R +T+++ K +R R P +F ++H Y+++ + SL+ F MM+ G P
Sbjct: 571 -DRAIQTVKEMQK----LRHR---PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
TV T+ +I L ++E A + DEM +GVS TY + Y D A + F
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKA----DMIGVVKE---------------------- 395
+++ +GL TY LL+ K+ + V KE
Sbjct: 683 TRLQNEGL-DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 396 ---IW------RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+W + MK+ GV PD+ YT I + A Q EM G P T
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKP 488
+ TL +G W R L E+++S E + +KP
Sbjct: 802 YTTLIKG---------WAR--ASLPEKALSCYEEMKAMGIKP 832
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 151/355 (42%), Gaps = 30/355 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ ++I+ K++ + A+ + +M + + P+ ++L ++S
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD----VILYNNIIS-------------- 562
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C G + A + ++ R P + + +I+G+ K G + + + M G
Sbjct: 563 AFCGMGNMDRAIQTVKEMQK-LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P V T+N L+NG+ K R + A ++ DEM G+ + +++ ++ Y+
Sbjct: 622 PTVHTFNGLINGLVEK----------RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + F ++ +G+ + TY +++K GR++ A + EM + +
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN + R D A L ++MK++G+ P HTY + KA + + +M
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGV-KPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
+ GV P++ YT LI G +A + EM G P K + L L+
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 845
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 141/364 (38%), Gaps = 38/364 (10%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT----------- 150
++ +I + D A Q + EM + P TF+ +I
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 151 ------TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
T F L++ L + ++ A E+ + + + YT ++ G+ +G
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILD-EMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
A + + G++ ++ TY LL C+ + + A V EM R I
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM----------QSALAVTKEMSARNI 725
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
+ ++I++ ++R + D + MK++G+ P + TYTS I + G + A
Sbjct: 726 PRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 785
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
+EM GV P TY K + + AL +++MK G+ P Y LL
Sbjct: 786 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI-KPDKAVYHCLLTSL 844
Query: 385 L------KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
L +A + V I ++M E+G+ D+ LC K + E ++K
Sbjct: 845 LSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLC---KIEASGGELTETLQK 901
Query: 439 GFLP 442
F P
Sbjct: 902 TFPP 905
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 69/259 (26%)
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
E+ +P T F +++ Y R + + F M+ +GI PT YTS+I A ++
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMD 361
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS------------------------ 356
+A +M G+ VTY+ + A++
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 357 -----------ALKLFKKMKEDGLCSP--------------------------------- 372
A L ++M+E+G+ +P
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT 481
Query: 373 -TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
T TYG L+ ++ K I E+ R MKE GV +L Y+++I+G + K W A
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 432 FVEMIEKGFLPQKVTFETL 450
F +M+++G P + + +
Sbjct: 542 FEDMVKEGMKPDVILYNNI 560
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 162/402 (40%), Gaps = 67/402 (16%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
P ++HS+ LL D + K + A ++I M + P+ S +
Sbjct: 104 PNVAHST-QLLYD-LCKANRLKKAIRVIELMVSSGIIPDASAY----------------- 144
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
T L++ LCK G V A ++ + H + + Y L+ G C LG + + F+ +
Sbjct: 145 -TYLVNQLCKRGNVGYAMQLVEKMEDH-GYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+++G+ PN TY+ LL + ER +A K+ DE+ +G EP++ S++++
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYK----------ERGTDEAVKLLDEIIVKGGEPNLVSYNVL 252
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
L + + + ++ FR + +G V +Y +++CL GR E+A L EM
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKM-KEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+P VTYN + AL++ K+M K + TA +Y ++ K + +V
Sbjct: 313 APSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLV 372
Query: 394 KEIWRDMKESGVGPDL-----------------------------------DLYTLLIHG 418
+ +M P+ D Y +I
Sbjct: 373 VKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITS 432
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
LC + A Q EM GF P T+ L RGL M
Sbjct: 433 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 175/424 (41%), Gaps = 74/424 (17%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF 155
P + +++ L+ + + + + Q + + Q+ L PN T+ L+ + + T E
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKE-RGTDEAV 231
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
+L + + K G P++ Y VL+ G+CK GR + A + E+
Sbjct: 232 KLLDEIIVKGG------------------EPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
+G + NVV+YN+LL +C + R+E +A+ + EM P V +++I++
Sbjct: 274 AKGFKANVVSYNILLRCLC------CDGRWE----EANSLLAEMDGGDRAPSVVTYNILI 323
Query: 276 HVYSRAHKPQLSLDKFRMMKEQG--ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
+ + + + +L + M + T +Y VI L G+++ DEM+
Sbjct: 324 NSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
Query: 334 VSPCAVTYN----------------------------CFFKEYRG-------RKDADSAL 358
P TYN C Y+ + + +A
Sbjct: 384 CKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAF 443
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES-GVGPDLDLYTLLIH 417
+L +M G P AHTY L++ M E+ M+ES P +D + +I
Sbjct: 444 QLLYEMTRCGF-DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMIL 502
Query: 418 GLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR------RLKKKLD 471
GLC+ ++ A + F M+EK +P + T+ L G+ D L + RL+K +
Sbjct: 503 GLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIG 562
Query: 472 EESI 475
+ ++
Sbjct: 563 QNAV 566
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 76 KHHSKIALSLFNYAKSLPNPP--LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPN 133
+H+SK+ F +SL N +H + +I ++ + A+QL+ EM + P+
Sbjct: 399 EHNSKVQ-EAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPD 457
Query: 134 PSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTV 193
T+ LIR LC G A EV + + P V +
Sbjct: 458 AHTYSALIR------------------GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNA 499
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
+I G CK+ R + A MVE+ PN TY +L+ G+ H +E + A
Sbjct: 500 MILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIA-----HEDE-----LELAK 549
Query: 254 KVFDEMRERGI 264
+V DE+R R +
Sbjct: 550 EVLDELRLRKV 560
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 172/399 (43%), Gaps = 34/399 (8%)
Query: 94 NPPLSHSSFHLLIDTMAKVRQFDLAWQLI-TEMDQRSLTPNPSTFLVLI----------- 141
N P + +I K+ + +LA + +D L PN T+ L+
Sbjct: 166 NYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDE 225
Query: 142 -RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAA--EVFNGNKRHCR--FNPDVKMYTVLIY 196
R LV + F + + +GY K A + ++ N DV Y++LI
Sbjct: 226 VRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILID 285
Query: 197 GWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVF 256
G K G VE A L +M++ G+EPN++TY ++ G+C+ L EE F +F
Sbjct: 286 GLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKL--EEAF--------VLF 335
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
+ + GIE D + ++ R + M+++GI P++ TY +VI L
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
GR+ +A DE V GV +TY+ Y ++ D+ L++ ++ E +
Sbjct: 396 GRVSEA----DE-VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
+LL+ FL G ++R M E + PD Y +I G C+ + EA + F E+
Sbjct: 451 -NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL- 508
Query: 437 EKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
K + V + + L + ML T + +L E+ +
Sbjct: 509 RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 36/319 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+ +LID ++K + A L+ +M + + PN T+ +IR
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIR------------------ 320
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LCK G ++ A +FN D +Y LI G C+ G + A S L +M +RGI+
Sbjct: 321 GLCKMGKLEEAFVLFN-RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+++TYN ++NG+C + +AD+V +G+ DV ++S +L Y +
Sbjct: 380 PSILTYNTVINGLC----------MAGRVSEADEV-----SKGVVGDVITYSTLLDSYIK 424
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
L+ R E I + ++K G +A+ L+ M ++P T
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y K Y + AL++F ++++ + A Y ++ K M+ E+ ++
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNELRKSSV--SAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 401 KESGVGPDLDLYTLLIHGL 419
E G+ D+ L+H +
Sbjct: 543 WEKGLYLDIHTSRTLLHSI 561
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 165/402 (41%), Gaps = 58/402 (14%)
Query: 133 NPSTFLVLIRRLVSDTKT--TSEHFTVLLDTLCKYGYVKLAAEVFNG-NKRHCRFNPDVK 189
+PS L+++R + + +S F L+ + G + A EV ++ + D
Sbjct: 113 DPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNF 172
Query: 190 MYTVLIYGWCKLGRVETAQSFLNEMVERGI-EPNVVTYNVLLNGVCRKVSLHPEERFERT 248
+ + +I G+CK+G+ E A F V+ G+ PN+VTY L++ +C+ + R
Sbjct: 173 VCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 232
Query: 249 IRDADKVFD-------------------------EMRERGIEPDVTSFSIVLHVYSRAHK 283
+ D FD EM E+G+ DV S+SI++ S+
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
+ +L M ++G+ P + TYT++I+ L G+LE+A LF+ ++ G+ Y
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 344 FFKEYRGRKDADSALKLFKKMKE--------------DGLCSPT---------------A 374
+ + + A + M++ +GLC
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDV 412
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
TY LL ++K I V EI R E+ + DL + +L+ + EA +
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 435 MIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
M E P T+ T+ +G ++ + + +L + S+S
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS 514
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 26/264 (9%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
DV YT++I G CK G + A + + RG+ N +TYN L+NG+C++ L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL------- 706
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM---MKEQGICPTV 303
+A ++FD + G+ P ++ I++ K L LD ++ M +G+ P +
Sbjct: 707 ---VEALRLFDSLENIGLVPSEVTYGILI---DNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
Y S++ G+ EDA + + V+P A T + K Y + D + AL +F +
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM--KESGVGPDLDLYTLLIHGLCE 421
K+ + S + L++ F + + + R+M ES V L + L E
Sbjct: 821 FKDKNI-SADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVV----KLINRVDAELAE 875
Query: 422 RKKWREACQFFVEMIEKGFLPQKV 445
+ R F VE+ E+G +PQ +
Sbjct: 876 SESIR---GFLVELCEQGRVPQAI 896
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ L++ LC+ G + A +F+ + + P Y +LI CK G A+ L+ M
Sbjct: 693 YNSLINGLCQQGCLVEALRLFD-SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
V +G+ PN++ YN +++G C+ L E DA +V + PD + S +
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCK---LGQTE-------DAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
+ Y + + +L F K++ I + +IK + GR+E+A GL EM+ S
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 39/289 (13%)
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG-IEPNVVTYNVLLNGVCRKVSLHP 241
+ N + ++Y+++ + + L R E A+ F+N + + I P + L++G
Sbjct: 56 QININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHG--------- 106
Query: 242 EERFERTIRDADKVF----DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ 297
F T D K D +R G P +F +++ + + +++ MM +
Sbjct: 107 ---FSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNK 163
Query: 298 GICPTVATY--TSVIKCLASCGRLEDAEGLFDEMVRSGV-SPCAVTYNCFFKEYRGRKDA 354
+ + ++VI G+ E A G F+ V SGV P VTY
Sbjct: 164 NVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKV 223
Query: 355 DSALKLFKKMKEDGL---C---SPTAHTY---GVLLQMFLKADMIGVVKEIWRDMKESGV 405
D L ++++++G C S H Y G L+ ++ R+M E G+
Sbjct: 224 DEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD----------REMVEKGM 273
Query: 406 GPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
D+ Y++LI GL + EA +MI++G P +T+ + RGL
Sbjct: 274 NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 152/409 (37%), Gaps = 61/409 (14%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL-----VSDTKTTSEH----- 154
LID + + + A+ ++ +M+QR + P+ T+ +I L VS+ S+
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDV 412
Query: 155 --FTVLLDTLCKYGYVKLAAEV--------FNGNKRHCR--------------------- 183
++ LLD+ K + E+ + C
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 184 -----FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
PD Y +I G+CK G++E A NE+ + + V YN +++ +C+K
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGM 531
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
L A +V E+ E+G+ D+ + +LH + L +++
Sbjct: 532 LDT----------ATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLN 581
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY-NCFFKEYRGRKDADSA 357
+ I L G E A ++ M R G++ VT+ + K + A
Sbjct: 582 SDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT---VTFPSTILKTLVDNLRSLDA 638
Query: 358 LKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH 417
L E L S Y +++ K + + K GV + Y LI+
Sbjct: 639 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698
Query: 418 GLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
GLC++ EA + F + G +P +VT+ L L + + +L
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKL 747
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 146/418 (34%), Gaps = 77/418 (18%)
Query: 109 MAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR----------------RLVSDTKTTS 152
M + D ++ + EMD LTP+ +T+ +I+ L + + +
Sbjct: 460 MGAYGEADALYRAMPEMD---LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA 516
Query: 153 EHFTVLLDTLCKYGYVKLAAEVF------------------------NGNKRHC------ 182
+ ++D LCK G + A EV NG +
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYG 576
Query: 183 --RFNPDV--KMYTVLIYGWCKLGRVETAQSFLNEMVERGIE---PNVVTYNVLLNGVCR 235
+ N DV M I CK G E A M +G+ P+ + ++ N
Sbjct: 577 LEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDN---- 632
Query: 236 KVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
L + + + + M DV ++I+++ + +L+ K
Sbjct: 633 ---LRSLDAYLLVVNAGETTLSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAK 682
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
+G+ TY S+I L G L +A LFD + G+ P VTY
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG---PDLDLY 412
A KL M GL P Y ++ + K +G ++ R + +G PD
Sbjct: 743 DAEKLLDSMVSKGLV-PNIIIYNSIVDGYCK---LGQTEDAMRVVSRKMMGRVTPDAFTV 798
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
+ +I G C++ EA F E +K F L +G + R L +++
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL LF+ +++ P S ++ +LID + K F A +L+ M + L PN ++I
Sbjct: 709 ALRLFDSLENIGLVP-SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN-----III 762
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+ ++D CK G + A V + K R PD + +I G+CK
Sbjct: 763 -------------YNSIVDGYCKLGQTEDAMRVVS-RKMMGRVTPDAFTVSSMIKGYCKK 808
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRK 236
G +E A S E ++ I + + L+ G C K
Sbjct: 809 GDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTK 843
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 118/258 (45%), Gaps = 37/258 (14%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT---------- 150
++++LI ++ FD A +L EM ++ + P TF LI L D++
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 151 --------TSEHFTVLLDTLCKYGYV----KLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
T + L+ LC+ G + KL E + G + D +Y+ LI
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG-----KIKVDAAIYSTLISSL 268
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
K GR L EM E+G +P+ VTYNVL+NG C E A++V DE
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC----------VENDSESANRVLDE 318
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M E+G++PDV S++++L V+ R K + + F M +G P +Y V L +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 319 LEDAEGLFDEMVRSGVSP 336
E+A + DEM+ G P
Sbjct: 379 FEEAAVILDEMLFKGYKP 396
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 12/286 (4%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PD Y +LI+G + G + A +EMV++ ++P VT+ L++G+C+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK---------- 199
Query: 246 ERTIRDADKV-FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
+ +++A K+ D ++ G+ P V ++ ++ + + + E I A
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
Y+++I L GR + + +EM G P VTYN + D++SA ++ +M
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
E GL P +Y ++L +F + ++ DM G PD Y ++ GLCE +
Sbjct: 320 VEKGL-KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
+ EA EM+ KG+ P++ E + L +S L ++ L
Sbjct: 379 FEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL 424
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 13/259 (5%)
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
K G +E + L+ + E G +P+ TYN+L++G + DA K+FDEM
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFD----------DALKLFDEM 178
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLD-KFRMMKEQGICPTVATYTSVIKCLASCGR 318
++ ++P +F ++H + + + +L K M+K G+ PTV Y S+IK L G
Sbjct: 179 VKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGE 238
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
L A L DE + A Y+ ++ + ++M E G C P TY
Sbjct: 239 LSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG-CKPDTVTYN 297
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
VL+ F + + +M E G+ PD+ Y +++ KKW EA F +M +
Sbjct: 298 VLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Query: 439 GFLPQKVTFETLYRGLIQS 457
G P +++ ++ GL +
Sbjct: 358 GCSPDTLSYRIVFDGLCEG 376
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
P TY +I + G +DA LFDEMV+ V P VT+ DS +K
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLC----KDSRVKE 205
Query: 361 FKKMKEDGL----CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
KMK D L PT H Y L++ + + ++ + E + D +Y+ LI
Sbjct: 206 ALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLI 265
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
L + + E EM EKG P VT+ L G + + R+ ++ E+ +
Sbjct: 266 SSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 30/328 (9%)
Query: 116 DLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVF 175
D+A + EM + ++PNP T +++ C+ G + E+
Sbjct: 220 DIALRFYREMRRCKISPNPYTL------------------NMVMSGYCRSGKLDKGIELL 261
Query: 176 NGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR 235
+R DV Y LI G C+ G + +A N M + G++PNVVT+N L++G CR
Sbjct: 262 QDMERLGFRATDVS-YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 236 KVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
+ L ++A KVF EM+ + P+ +++ +++ YS+ +++ + M
Sbjct: 321 AMKL----------QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
GI + TY ++I L + A E+ + + P + T++ RK+AD
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
+L+K M G C P T+ +L+ F + + ++ R+M + D +
Sbjct: 431 RGFELYKSMIRSG-CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 416 IHGLCERKKWREACQFFVEMIEKGFLPQ 443
+GL + K + + EM K FL +
Sbjct: 490 CNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 176/417 (42%), Gaps = 63/417 (15%)
Query: 81 IALSLFNYAKSLPNPPLSHS--SFHLLIDTMAKVRQFDLAWQLITEM------------- 125
++L FN+AK+ P SHS + +++ T+ K R+F A ++ ++
Sbjct: 97 LSLEFFNWAKT--RNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVF 154
Query: 126 -----DQRSLTPNPSTFLVLIR--------RLVSDT---------KTTSEHFTVLLDTLC 163
R P F L + R +DT T E + +L
Sbjct: 155 DALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLL 214
Query: 164 KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNV 223
G V +A + R C+ +P+ +++ G+C+ G+++ L +M G
Sbjct: 215 GQGRVDIALRFYR-EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 224 VTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
V+YN L+ G C K L A K+ + M + G++P+V +F+ ++H + RA K
Sbjct: 274 VSYNTLIAGHCEKGLLS----------SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
Q + F MK + P TY ++I + G E A +++MV +G+ +TYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 344 FF----KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL--QMFLKADMIGVVKEIW 397
K+ + RK A + K++ ++ L P + T+ L+ Q K G E++
Sbjct: 384 LIFGLCKQAKTRK----AAQFVKELDKENLV-PNSSTFSALIMGQCVRKNADRGF--ELY 436
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ M SG P+ + +L+ C + + A Q EM+ + T + GL
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 9/314 (2%)
Query: 170 LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNE-MVERGIEPNVVTYNV 228
L+ E FN K + ++ + ++++ K + ++A+S L + +V G++ ++
Sbjct: 97 LSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDA 156
Query: 229 LLNGV--CRKVSLHPEERFE-----RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
LL C + F+ + R+A F +M++ G P V S + +
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ 216
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ ++L +R M+ I P T V+ G+L+ L +M R G V+Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
N + + SALKL M + GL P T+ L+ F +A + +++ +MK
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGL-QPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLR 461
V P+ Y LI+G ++ A +F+ +M+ G +T+ L GL + R
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 462 TWRRLKKKLDEESI 475
+ K+LD+E++
Sbjct: 396 KAAQFVKELDKENL 409
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 30/328 (9%)
Query: 116 DLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVF 175
D+A + EM + ++PNP T +++ C+ G + E+
Sbjct: 220 DIALRFYREMRRCKISPNPYTL------------------NMVMSGYCRSGKLDKGIELL 261
Query: 176 NGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR 235
+R DV Y LI G C+ G + +A N M + G++PNVVT+N L++G CR
Sbjct: 262 QDMERLGFRATDVS-YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 236 KVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
+ L ++A KVF EM+ + P+ +++ +++ YS+ +++ + M
Sbjct: 321 AMKL----------QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
GI + TY ++I L + A E+ + + P + T++ RK+AD
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 356 SALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
+L+K M G C P T+ +L+ F + + ++ R+M + D +
Sbjct: 431 RGFELYKSMIRSG-CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 416 IHGLCERKKWREACQFFVEMIEKGFLPQ 443
+GL + K + + EM K FL +
Sbjct: 490 CNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 176/417 (42%), Gaps = 63/417 (15%)
Query: 81 IALSLFNYAKSLPNPPLSHS--SFHLLIDTMAKVRQFDLAWQLITEM------------- 125
++L FN+AK+ P SHS + +++ T+ K R+F A ++ ++
Sbjct: 97 LSLEFFNWAKT--RNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVF 154
Query: 126 -----DQRSLTPNPSTFLVLIR--------RLVSDT---------KTTSEHFTVLLDTLC 163
R P F L + R +DT T E + +L
Sbjct: 155 DALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLL 214
Query: 164 KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNV 223
G V +A + R C+ +P+ +++ G+C+ G+++ L +M G
Sbjct: 215 GQGRVDIALRFYR-EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 224 VTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
V+YN L+ G C K L A K+ + M + G++P+V +F+ ++H + RA K
Sbjct: 274 VSYNTLIAGHCEKGLLS----------SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
Q + F MK + P TY ++I + G E A +++MV +G+ +TYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 344 FF----KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL--QMFLKADMIGVVKEIW 397
K+ + RK A + K++ ++ L P + T+ L+ Q K G E++
Sbjct: 384 LIFGLCKQAKTRK----AAQFVKELDKENLV-PNSSTFSALIMGQCVRKNADRGF--ELY 436
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ M SG P+ + +L+ C + + A Q EM+ + T + GL
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 9/314 (2%)
Query: 170 LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNE-MVERGIEPNVVTYNV 228
L+ E FN K + ++ + ++++ K + ++A+S L + +V G++ ++
Sbjct: 97 LSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDA 156
Query: 229 LLNGV--CRKVSLHPEERFE-----RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
LL C + F+ + R+A F +M++ G P V S + +
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ 216
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+ ++L +R M+ I P T V+ G+L+ L +M R G V+Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
N + + SALKL M + GL P T+ L+ F +A + +++ +MK
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGL-QPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 402 ESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLR 461
V P+ Y LI+G ++ A +F+ +M+ G +T+ L GL + R
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 462 TWRRLKKKLDEESI 475
+ K+LD+E++
Sbjct: 396 KAAQFVKELDKENL 409
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 176/396 (44%), Gaps = 31/396 (7%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
L +FN A +++++ +L+D + + ++F ++ +M + S FL L+
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 142 R------------------RLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
R ++++ K + + L+ L G V L+ ++ K +
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE-PNVVTYNVLLNGVCRKVSLHPE 242
P+ ++ +L+ CK G + A + EM GI PN +TY+ L++ L
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMD------CLFAH 245
Query: 243 ERFERTIRDADKVFDEM-RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
R ++A ++F++M + GI PD +F+++++ + RA + + + MK+ G P
Sbjct: 246 SRS----KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNP 301
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
V Y++++ G++++A+ FDE+ ++G+ V Y + + D A+KL
Sbjct: 302 NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
+MK C TY V+L+ ++ GV + Y ++++ LC
Sbjct: 362 GEMKAS-RCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+ +A +F M E+G P T+ L L +S
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCES 456
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 30/324 (9%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLT-PNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
F++L+ K + A+ ++ EM + ++ PN T+ + L+D
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITY------------------STLMD 240
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
L + K A E+F +PD + V+I G+C+ G VE A+ L+ M + G
Sbjct: 241 CLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN 300
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PNV Y+ L+NG C+ I++A + FDE+++ G++ D ++ +++ + R
Sbjct: 301 PNVYNYSALMNGFCKV----------GKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ ++ MK TY +++ L+S GR E+A + D+ GV +
Sbjct: 351 NGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGS 410
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y + + A+K M E G+ P T+ L+ ++ + +
Sbjct: 411 YRIILNALCCNGELEKAVKFLSVMSERGIW-PHHATWNELVVRLCESGYTEIGVRVLIGF 469
Query: 401 KESGVGPDLDLYTLLIHGLCERKK 424
G+ P + ++ +C+ +K
Sbjct: 470 LRIGLIPGPKSWGAVVESICKERK 493
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 157/357 (43%), Gaps = 43/357 (12%)
Query: 152 SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN--PDVKMYTVLIYGWCKLGRVETAQS 209
S +T L+ K G V A + +R N PD YT ++ + G ++ A+
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473
Query: 210 FLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE-RGIEPDV 268
L EM G+ N +TYNVLL G C+++ + +R E +R EM E GIEPDV
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQI---DRAEDLLR-------EMTEDAGIEPDV 523
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE 328
S++I++ +L F M+ +GI PT +YT+++K A G+ + A +FDE
Sbjct: 524 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 329 MVRSG-VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
M+ V + +N + Y + A ++ +MKE+G P TYG L +A
Sbjct: 584 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF-YPNVATYGSLANGVSQA 642
Query: 388 DMIGVVKEIWRDMKE-------------------SGVGPDLDLYTLLIHGLCERKK-WRE 427
G +W+++KE + PD L L +C R +++
Sbjct: 643 RKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLAD-ICVRAAFFKK 701
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGL-------IQSDMLRTWRRLKKKLDEESISF 477
A + M E G P K ++ +Y + + R RR+++K E+ F
Sbjct: 702 ALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKF 758
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRS-LTPNPSTFLVLIRR--LVSDTK--- 149
P + ++++L+ K Q D A L+ EM + + + P+ ++ ++I L+ D+
Sbjct: 484 PANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGAL 543
Query: 150 ------------TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
T +T L+ G KLA VF+ R D+ + +L+ G
Sbjct: 544 AFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEG 603
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+C+LG +E AQ ++ M E G PNV TY L NGV + R DA ++
Sbjct: 604 YCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA----------RKPGDALLLWK 653
Query: 258 EMRERG-------------------IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
E++ER ++PD + + RA + +L+ M+E G
Sbjct: 654 EIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENG 713
Query: 299 ICPTVATYTSV 309
I P Y +
Sbjct: 714 IPPNKTKYKKI 724
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 3/183 (1%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER-- 244
D +L K G+ A S + M+ G P+V + + + PEE
Sbjct: 152 DANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIK 211
Query: 245 -FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
F R + D+ PD +F+ VL+ + F M E P V
Sbjct: 212 LFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDV 271
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
TY +IK A GR E + + ++ G+ C T + Y G D +A ++ +
Sbjct: 272 LTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQA 331
Query: 364 MKE 366
M+E
Sbjct: 332 MRE 334
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 167/376 (44%), Gaps = 29/376 (7%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR-----------------R 143
+++++I + K A L+ +M P+ T+ +IR +
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
L + +TVL++ +C+Y A EV + PD+ Y L+ C+ G
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCY-PDIVTYNSLVNYNCRRGN 294
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+E S + ++ G+E N VTYN LL+ +C E ++ + +++ + M +
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCS------HEYWD----EVEEILNIMYQTS 344
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
P V +++I+++ +A ++D F M EQ P + TY +V+ ++ G ++DA
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
L + + P +TYN + AL+L+ +M + G+ P T L+
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI-FPDDITRRSLIYG 463
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
F +A+++ ++ ++ G G Y L+I GLC++K+ A + M+ G P
Sbjct: 464 FCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Query: 444 KVTFETLYRGLIQSDM 459
+ + + +G+ + M
Sbjct: 524 ETIYTAIVKGVEEMGM 539
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 18/316 (5%)
Query: 146 SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
+D +T +E +L LC G + A ++ RH + P + L+ G ++ +++
Sbjct: 102 NDEETNNE----ILHNLCSNGKLTDACKLVEVMARHNQV-PHFPSCSNLVRGLARIDQLD 156
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
A L MV G P+ +TYN+++ +C+K IR A + ++M G
Sbjct: 157 KAMCILRVMVMSGGVPDTITYNMIIGNLCKK----------GHIRTALVLLEDMSLSGSP 206
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS-CGRLEDAEG 324
PDV +++ V+ + ++ ++ + G P + TYT +++ + CG E
Sbjct: 207 PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE- 265
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
+ ++M G P VTYN R + + + + + GL T TY LL
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTV-TYNTLLHSL 324
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
+ V+EI M ++ P + Y +LI+GLC+ + A FF +M+E+ LP
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 445 VTFETLYRGLIQSDML 460
VT+ T+ + + M+
Sbjct: 385 VTYNTVLGAMSKEGMV 400
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 160/348 (45%), Gaps = 27/348 (7%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+ LFN + L+ ++ L+ +AK + D A Q+ + M + PN T+ +L+
Sbjct: 289 AVGLFNEMIT-EGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 142 RRLVSDTK--------------TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPD 187
LV++ + T ++ L+ TL K G+V A +F + +
Sbjct: 348 NLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLF-CDMWSFPVKGE 406
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFER 247
Y ++ C G+ A L+++ E+G+ + + YN + + + + +
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL----------K 456
Query: 248 TIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
I +F++M++ G PD+ +++I++ + R + +++ F ++ P + +Y
Sbjct: 457 QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYN 516
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKED 367
S+I CL G +++A F EM G++P VTY+ + + + + A LF++M
Sbjct: 517 SLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK 576
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
G C P TY +LL K +++ MK+ G+ PD YT+L
Sbjct: 577 G-CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 155/372 (41%), Gaps = 45/372 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++++L+D +AK + A Q+ +M +R + T+ ++IR
Sbjct: 240 AYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIR------------------ 278
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
T+ + G A +FN +V Y L+ K V+ A + MVE G
Sbjct: 279 TMGRIGKCDEAVGLFNEMITE-GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 221 PNVVTYNVLLN------------GVC----RKVSLHPEERFERT------IRDADKVFDE 258
PN TY++LLN GV R ++ RT + +A ++F +
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCD 397
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
M ++ + S+ +L A K +++ + E+G+ Y +V L +
Sbjct: 398 MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ 457
Query: 319 LEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
+ LF++M + G SP TYN + + D A+ +F+++ E C P +Y
Sbjct: 458 ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL-ERSDCKPDIISYN 516
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
L+ K + +++M+E G+ PD+ Y+ L+ + ++ A F EM+ K
Sbjct: 517 SLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK 576
Query: 439 GFLPQKVTFETL 450
G P VT+ L
Sbjct: 577 GCQPNIVTYNIL 588
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 58/306 (18%)
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLL----NGVCRKVSLHPEERFERTI--------- 249
R + +S L+ MV+ + N+ T N+L+ N ++ L ++++ +
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLL 210
Query: 250 ------RDADKVFD---EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
RD K FD E+R G + D+ +++++L ++ K + F MK++
Sbjct: 211 QAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCR 267
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
TYT +I+ + G+ ++A GLF+EM+ G++ V YN + K D A+++
Sbjct: 268 RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV 327
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMI----GVVK---------------------- 394
F +M E G C P +TY +LL + + + GVV+
Sbjct: 328 FSRMVETG-CRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 395 ------EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
++ DM V + D Y ++ LC K EA + ++ EKG + + +
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 449 TLYRGL 454
T++ L
Sbjct: 447 TVFSAL 452
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 166/414 (40%), Gaps = 88/414 (21%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ V D L K G V+ A E+ K PDV YT LI G+C G+V A ++EM
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDR-GIVPDVINYTTLIDGYCLQGKVVDALDLIDEM 449
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEER---------------------------FER 247
+ G+ P+++TYNVL++G+ R + H EE F R
Sbjct: 450 IGNGMSPDLITYNVLVSGLAR--NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 248 TIRDADKVFDEMRERGIEPDVTS---------------------------------FSIV 274
+++A+ F + ++ E + FS+
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 275 LHVY-SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
+ Y +AH + +R+ + +C +I + +A+ LFD MV G
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCG------KMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD----- 388
+ P TY Y + A LF+ MK+ G+ P TY VLL +LK D
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI-KPDVVTYTVLLDRYLKLDPEHHE 680
Query: 389 ------MIGVVK--EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+G K E+ R+ +G+G D+ YT+LI C+ +A + F MI+ G
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 441 LPQKVTFETLYRGLIQS---DMLRTW-RRLKKKLDEESISFGSEFQNYQLKPYR 490
P V + TL + DM T L KK + S SF + ++ LK R
Sbjct: 741 EPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKR 794
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 145/347 (41%), Gaps = 44/347 (12%)
Query: 134 PSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTV 193
P L + L K +++L CK A E F R D Y V
Sbjct: 335 PEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFK-EFRDMNIFLDRVCYNV 393
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
KLGRVE A L EM +RGI P+V+ Y L++G C + + DA
Sbjct: 394 AFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC----------LQGKVVDAL 443
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
+ DEM G+ PD+ ++++++ +R + L+ + MK +G P T + +I+ L
Sbjct: 444 DLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Query: 314 ASCGRLEDAEGLFDEM---------------VRSGVSPCAVTYNCFFK-EYRGRKDA--- 354
++++AE F + +G+S A Y F + EY RK
Sbjct: 504 CFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKA--YKAFVRLEYPLRKSVYIK 561
Query: 355 -----------DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
+ A + KKM + P G ++ F K + + + ++ M E
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRV-EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
G+ PDL YT++IH C + ++A F +M ++G P VT+ L
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 17/253 (6%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR-KVSLHPE 242
F DV +I +CK + A FL++M+ +G++ N V +++L C+ + L
Sbjct: 314 FGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEAL 373
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
E+F+ E R+ I D +++ S+ + + + + + MK++GI P
Sbjct: 374 EKFK-----------EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD 422
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
V YT++I G++ DA L DEM+ +G+SP +TYN + L++++
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+MK +G P A T V+++ A + ++ + +++ P+ + G CE
Sbjct: 483 RMKAEG-PKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPENK--ASFVKGYCEA 537
Query: 423 KKWREACQFFVEM 435
++A + FV +
Sbjct: 538 GLSKKAYKAFVRL 550
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 149/360 (41%), Gaps = 47/360 (13%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTT-SEHFTVLL 159
++++L+ +A+ + ++ M PN T V+I L K +E F L
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 160 DTLC---KYGYVKLAAEVFNGNKRHCRF----NPDVK-MYTVLIYGWCKLGRVETAQSFL 211
+ C K +VK E K + F P K +Y L + C G +E A L
Sbjct: 520 EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVL 579
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
+M +EP ++ C+ +R+A +FD M ERG+ PD+ ++
Sbjct: 580 KKMSAYRVEPGRSMCGKMIGAFCKL----------NNVREAQVLFDTMVERGLIPDLFTY 629
Query: 272 SIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR 331
+I++H Y R ++ Q + F MK++GI P V TYT L D ++
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV----------------LLDRYLK 673
Query: 332 SGVSPCAVTYNCFFKEYRGRKDADSALKLFKK--MKEDGLCSPTAHTYGVLLQMFLKADM 389
+ P C + G++ A L+ F + D +C Y VL+ K +
Sbjct: 674 --LDP-EHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVC------YTVLIDRQCKMNN 724
Query: 390 IGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
+ E++ M +SG+ PD+ YT LI + A E+ +K +P + +FE
Sbjct: 725 LEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE-SFEA 783
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 34/289 (11%)
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
Y +++ C+ G +E A L E +V Y +NG+C V+ E+ +
Sbjct: 219 YAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLC--VTGETEKAVALILE 270
Query: 251 DADKVF---DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
D+ + D++R +V+ + K + + M+E G V
Sbjct: 271 LIDRKYLAGDDLR--------AVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACL 322
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE- 366
+VI L +A G D+M+ G+ V + + Y AL+ FK+ ++
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 367 ----DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
D +C Y V K + E+ ++MK+ G+ PD+ YT LI G C +
Sbjct: 383 NIFLDRVC------YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQ 436
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS----DMLRTWRRLK 467
K +A EMI G P +T+ L GL ++ ++L + R+K
Sbjct: 437 GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 150/368 (40%), Gaps = 34/368 (9%)
Query: 77 HHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPST 136
+ +A+ +F A+ P ++ ++ ++ +F A +L+ M QR P+ +
Sbjct: 205 NQESLAVEIFTRAE--PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLIS 262
Query: 137 FLVLIRRLVSDTKTTSEHFTVLLDTLCKYG-------YVKL------------AAEVFNG 177
F LI + T LLD + G Y L A +VF
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 178 NKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKV 237
+ H R PD+ Y +I + + G A+ E+ +G P+ VTYN LL R
Sbjct: 323 MEAH-RCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR-- 379
Query: 238 SLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKE- 296
ER +V+ +M++ G D +++ ++H+Y + + L+L ++ MK
Sbjct: 380 --------ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 297 QGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
G P TYT +I L R +A L EM+ G+ P TY+ Y +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 357 ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
A F M G P Y V+L + L+ + ++RDM G P LY L+I
Sbjct: 492 AEDTFSCMLRSG-TKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 417 HGLCERKK 424
GL + +
Sbjct: 551 LGLMKENR 558
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 144/315 (45%), Gaps = 16/315 (5%)
Query: 143 RLVSDTKTTSEHFT---VLLDTLCKYGYVKL--AAEVFNGNKRHCRFNPDVKMYTVLIYG 197
++V+ +T HF + D + YG KL AE GN R PD+K + L+
Sbjct: 737 QVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ + G E A++ N M+ G P V + N+LL+ +C V EE + V +
Sbjct: 797 YAQCGCYERARAIFNTMMRDGPSPTVESINILLHALC--VDGRLEELY--------VVVE 846
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
E+++ G + +S ++L ++RA + MK G PT+ Y +I+ L
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
R+ DAE + EM + +N K Y +D +++++++KE GL P TY
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL-EPDETTY 965
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
L+ M+ + + + M+ G+ P LD Y LI ++K +A Q F E++
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 438 KGFLPQKVTFETLYR 452
KG + + T+ +
Sbjct: 1026 KGLKLDRSFYHTMMK 1040
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 141/341 (41%), Gaps = 45/341 (13%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
+L L ++ LA E+F + V++Y ++ + + G+ AQ ++ M
Sbjct: 195 AAILGVLGRWNQESLAVEIFT--RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMR 252
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
+RG P+++++N L+N + L P E + D +R G+ PD +++ +L
Sbjct: 253 QRGCVPDLISFNTLINARLKSGGLTPNLAVE--------LLDMVRNSGLRPDAITYNTLL 304
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
SR ++ F M+ P + TY ++I CG +AE LF E+ G
Sbjct: 305 SACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF 364
Query: 336 PCAVTYN----CFFKE-------------------------------YRGRKDADSALKL 360
P AVTYN F +E Y + D AL+L
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLC 420
+K MK +P A TY VL+ KA+ + +M + G+ P L Y+ LI G
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 421 ERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLR 461
+ K EA F M+ G P + + + L++ + R
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 136/294 (46%), Gaps = 12/294 (4%)
Query: 149 KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ 208
K + ++LD + G + ++++ K + P +++Y ++I CK RV A+
Sbjct: 854 KISKSSILLMLDAFARAGNIFEVKKIYSSMK-AAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
++EM E + + +N +L E +++T+ +V+ ++E G+EPD
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLK------MYTAIEDYKKTV----QVYQRIKETGLEPDE 962
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDE 328
T+++ ++ +Y R +P+ + M+ G+ P + TY S+I LE AE LF+E
Sbjct: 963 TTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEE 1022
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
++ G+ Y+ K R A KL + MK G+ PT T +L+ + +
Sbjct: 1023 LLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI-EPTLATMHLLMVSYSSSG 1081
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
+++ ++K++ V Y+ +I K + + +EM ++G P
Sbjct: 1082 NPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEP 1135
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ ++ K G + LA +++ K NPD YTVLI K R A + ++EM
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
++ GI+P + TY+ L+ G + +A+ F M G +PD ++S++
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKRE----------EAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR-SG 333
L V R ++ + + +R M G P+ Y +I L R +D + +M G
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574
Query: 334 VSPCAVT 340
++P ++
Sbjct: 575 MNPLEIS 581
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 166/405 (40%), Gaps = 45/405 (11%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEM-DQRSLTPNPSTFLVL 140
AL F +A + P S S++ L + R+FD +QL+ EM D L P+ + F+ +
Sbjct: 59 ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTI 118
Query: 141 IR---------RLVSDTKTTSEH--------FTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
IR R++S S+ F +LD L K + +A E F
Sbjct: 119 IRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASG 177
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
+ DV Y +L+ G R+ L M G+ PN V YN LL+ +C+ +
Sbjct: 178 IHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRAR 237
Query: 244 RFERTIRDADKV---------------------FDEMRERGIEPDVTSFSIVLHVYSRAH 282
+++ + V ++ G PDV + + V+ V
Sbjct: 238 SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
Query: 283 KPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYN 342
+ +L+ ++ +G V +++K + G++ A+ F EM R G P TYN
Sbjct: 298 RVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYN 357
Query: 343 CFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
Y DSAL F MK D + A T+ L++ +I M++
Sbjct: 358 LLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA-TFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 403 SGV--GPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
S G +D Y +I+G + +W +A +F ++M EK F P+ V
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM-EKLF-PRAV 459
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 147/359 (40%), Gaps = 38/359 (10%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ L+ + K + A L++EM + PN TF +LI ++ K VLL+
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQS--MVLLEK 273
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
G+V PDV T ++ C GRV A L + +G +
Sbjct: 274 CFSLGFV-----------------PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV 316
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
+VV N L+ G C + +RF F EM +G P+V ++++++ Y
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRF----------FIEMERKGYLPNVETYNLLIAGYCDV 366
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT- 340
+LD F MK I AT+ ++I+ L+ GR +D + + M S A
Sbjct: 367 GMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID 426
Query: 341 -YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
YNC + + AL+ KM++ P A L + + +K +
Sbjct: 427 PYNCVIYGFYKENRWEDALEFLLKMEK---LFPRAVDRSFKLISLCEKGGMDDLKTAYDQ 483
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
M G P + + LIH + K E+ + +M+ +G+LP+ TF + G + D
Sbjct: 484 MIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 15/275 (5%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PD ++ +I G+ + ++ S ++ + + GI+P++ +N +L+ + ++ E F
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFF 169
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
R +M GI DV ++ I++ S ++ ++MK G+ P
Sbjct: 170 TR----------KMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVV 219
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y +++ L G++ A L EM P VT+N Y + ++ L +K
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
G P T ++++ + E+ ++ G D+ L+ G C K
Sbjct: 276 SLGFV-PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKM 334
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
R A +FF+EM KG+LP T+ L G ML
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGML 369
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 117/301 (38%), Gaps = 18/301 (5%)
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVER-GIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 249
Y L + C R +T L+EM + G+ P+ + ++ G R R I
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRA----------RLI 128
Query: 250 RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF-RMMKEQGICPTVATYTS 308
+ V D + + GI+P + F+ +L V + ++ + F R M GI V TY
Sbjct: 129 KRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGI 187
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
++K L+ R+ D L M SGV+P AV YN A L +MKE
Sbjct: 188 LMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE-- 245
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
P T+ +L+ + + + G PD+ T ++ LC + EA
Sbjct: 246 ---PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEA 302
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKP 488
+ + KG V TL +G +R +R +++ + E N +
Sbjct: 303 LEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAG 362
Query: 489 Y 489
Y
Sbjct: 363 Y 363
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P + + LI+ + + G++E + +N+MV RG P T+N ++ G C+
Sbjct: 491 PSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCK---------- 540
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
+ + + K ++M ERG PD S++ +L Q + F M E+ I P +
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Query: 306 YTSVIKCLA 314
++S++ CL+
Sbjct: 601 WSSLMFCLS 609
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 181/450 (40%), Gaps = 96/450 (21%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
S+ ALS+FN + L L +L+ + K Q D A++LI +++R + N T+
Sbjct: 230 SERALSVFN--EILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYC 287
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
VLI V +++ + A ++F +R N D+ +Y VLI G
Sbjct: 288 VLIHGFVKESR------------------IDKAFQLFEKMRRM-GMNADIALYDVLIGGL 328
Query: 199 CKLGRVETAQSFLNEMVERGIEPN---------------------------------VVT 225
CK +E A S E+ GI P+ ++
Sbjct: 329 CKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLL 388
Query: 226 YNVLLNGVCRKVSLHPEERFERTIR---DADKVFDEMR-----ERGIEPDVTSFSIVLHV 277
Y L G R +H F + + ++D V + ++ + I PD S SIV++
Sbjct: 389 YKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINC 448
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
+A+K +++ + + G+ P Y ++I+ + GR E++ L EM +GV P
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY-------------------- 377
T NC + R D AL L KKM+ G HT
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLD 568
Query: 378 -----GVLLQMFLKADMI-GVVK--------EIWRDMKESGVGPDLDLYTLLIHGLCERK 423
G L M I G++K E++RD+ +G PD+ Y +LI LC+
Sbjct: 569 DVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKAC 628
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ EA F EM+ KG P T+ ++ G
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 15/288 (5%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PD +++I K +V+ A + L+++V+ G+ P + YN ++ G+C+ E R
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCK------EGRS 490
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
E ++ K+ EM++ G+EP + + + + +LD + M+ G P +
Sbjct: 491 EESL----KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKH 546
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
T ++K L GR DA D++ G V + D L+LF+ +
Sbjct: 547 TTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDIC 606
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
+G C P Y VL++ KA ++ +M G+ P + Y +I G C+ +
Sbjct: 607 ANGHC-PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI 665
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 469
V M E P +T+ +L GL S+ + W +K K
Sbjct: 666 DRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGK 713
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 134/353 (37%), Gaps = 60/353 (16%)
Query: 152 SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFL 211
S+ +++++ L K V +A + + ++ P MY +I G CK GR E + L
Sbjct: 439 SDSLSIVINCLVKANKVDMAVTLLHDIVQN-GLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRK------VSLHPEERF---ERTIR------------ 250
EM + G+EP+ T N + + + + L + RF E I+
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN 557
Query: 251 ----DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
DA K D++ G + + + + + L+ FR + G CP V Y
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
+IK L R +A+ LF+EMV G+ P TYN + + D L +M E
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Query: 367 D--------------GLCS--------------------PTAHTYGVLLQMFLKADMIGV 392
D GLC+ P T+ L+Q K G
Sbjct: 678 DEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGE 737
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
+R+M+E + PD +Y L+ + F EM+ KG P V
Sbjct: 738 ALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 161/425 (37%), Gaps = 82/425 (19%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSL-TPNPSTFLVLIRRLVSDTKTTSEHF 155
+S +F I + D A + + + L PN T+ L+ + ++ E
Sbjct: 139 MSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELV 198
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
L + R C F+ D T ++ +C G+ E A S NE++
Sbjct: 199 EARLKEM-----------------RDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEIL 241
Query: 216 ERG-IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
RG ++ ++ T +L+ C+ + A ++ + + ER I + ++ ++
Sbjct: 242 SRGWLDEHIST--ILVVSFCKW----------GQVDKAFELIEMLEERDIRLNYKTYCVL 289
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+H + + + + F M+ G+ +A Y +I L LE A L+ E+ RSG+
Sbjct: 290 IHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGI 349
Query: 335 SPCAVTYN---CFFKEYR----------GRKDADSALKLFKKMKE--------------- 366
P C F E G D S + L+K + E
Sbjct: 350 PPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFI 409
Query: 367 ---------DGLCS-------------PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
DG+ P + + +++ +KA+ + + + D+ ++G
Sbjct: 410 QNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNG 469
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ-SDMLRTW 463
+ P +Y +I G+C+ + E+ + EM + G P + T +Y L + D +
Sbjct: 470 LIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGAL 529
Query: 464 RRLKK 468
LKK
Sbjct: 530 DLLKK 534
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 30/298 (10%)
Query: 170 LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI-EPNVVTYNV 228
L +V N C +P + + G G V+ A S + + E G+ PN TYN
Sbjct: 128 LVVDVLNS---RCFMSPGAFGFFIRCLG--NAGLVDEASSVFDRVREMGLCVPNAYTYNC 182
Query: 229 LLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSL 288
LL + + S ++ + EMR+ G D + + VL VY K + +L
Sbjct: 183 LLEAISKSNS--------SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 289 DKFRMMKEQGICPTVATYTSVIKCLASC--GRLEDA----EGLFDEMVRSGVSPCAVTYN 342
F + +G + + S I ++ C G+++ A E L + +R V +
Sbjct: 235 SVFNEILSRG---WLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIH 291
Query: 343 CFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
F KE R D A +LF+KM+ G+ + A Y VL+ K + + ++ ++K
Sbjct: 292 GFVKESR----IDKAFQLFEKMRRMGMNADIA-LYDVLIGGLCKHKDLEMALSLYLEIKR 346
Query: 403 SGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
SG+ PD + L+ E + + + I+K + + +++L+ G I++D++
Sbjct: 347 SGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV--MLLYKSLFEGFIRNDLV 402
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 160/388 (41%), Gaps = 36/388 (9%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
P + S++ LI + V D A L M++ + PN T
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTC----------------- 229
Query: 155 FTVLLDTLCKYGYV-----KLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQS 209
+++ LC+ G + KL E+ + ++ + D+ + T+L+ K G V A
Sbjct: 230 -NIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL--DIVICTILMDSCFKNGNVVQALE 286
Query: 210 FLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVT 269
EM ++ + + V YNV++ G+C ++ F +M +RG+ PDV
Sbjct: 287 VWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF----------MCDMVKRGVNPDVF 336
Query: 270 SFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
+++ ++ + K + D M+ G+ P +Y +I+ L G + A M
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 330 VRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADM 389
++S + P + +N Y D SAL + M G+ P +T L+ ++K
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV-KPNVYTNNALIHGYVKGGR 455
Query: 390 IGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
+ + +M+ + + PD Y LL+ C R A Q + EM+ +G P +T+
Sbjct: 456 LIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTE 515
Query: 450 LYRGLIQSDMLRTWRRLKKKLDEESISF 477
L RGL L+ L ++ I+
Sbjct: 516 LVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 28/290 (9%)
Query: 91 SLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT 150
S N P ++++I + A+ + +M +R + P+ T+ LI L + K
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 151 TSE-----------------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTV 193
+ V++ LC +G V A E F + P+V ++ V
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE-FLLSMLKSSLLPEVLLWNV 410
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
+I G+ + G +A S LN M+ G++PNV T N L++G + L DA
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL----------IDAW 460
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
V +EMR I PD T+++++L +L+ + M +G P + TYT +++ L
Sbjct: 461 WVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGL 520
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
GRL+ AE L + +G++ V + K+Y + A ++KK
Sbjct: 521 CWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 126/321 (39%), Gaps = 57/321 (17%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P + + L+ G CK G +E A + EM E G PN V+YN L+ G+C
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLC----------- 202
Query: 246 ERTIRDADK---VFDEMRERGIEPDVTSFSIVLHVY--------------------SRAH 282
++ + DK +F+ M + GI P+ + +I++H S+A+
Sbjct: 203 --SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQAN 260
Query: 283 KP-------------------QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
P +L+ ++ M ++ + Y +I+ L S G + A
Sbjct: 261 APLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAY 320
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
G +MV+ GV+P TYN D A L M+ G+ +P +Y V++Q
Sbjct: 321 GFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV-APDQISYKVIIQG 379
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+ E M +S + P++ L+ ++I G A M+ G P
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Query: 444 KVTFETLYRGLIQSD-MLRTW 463
T L G ++ ++ W
Sbjct: 440 VYTNNALIHGYVKGGRLIDAW 460
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 140/362 (38%), Gaps = 65/362 (17%)
Query: 91 SLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT 150
S N PL +L+D+ K A ++ EM Q+++ + + V+IR L S
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 151 TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSF 210
+ YG+ + V G NPDV Y LI CK G+ + A
Sbjct: 317 VA-----------AYGF--MCDMVKRG------VNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 211 LNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTS 270
M G+ P+ ++Y V++ G+C +H + + A++ M + + P+V
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLC----IHGD------VNRANEFLLSMLKSSLLPEVLL 407
Query: 271 FSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMV 330
+++V+ Y R +L +M G+ P V T ++I GRL DA + +EM
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMR 467
Query: 331 RSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMI 390
+ + P TYN A T G L F
Sbjct: 468 STKIHPDTTTYNLLLG--------------------------AACTLGHLRLAF------ 495
Query: 391 GVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+++ +M G PD+ YT L+ GLC + + ++A + G V F L
Sbjct: 496 ----QLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Query: 451 YR 452
+
Sbjct: 552 AK 553
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 40/204 (19%)
Query: 292 RMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGR 351
+ M G+ P + T+ ++ L G +E A+GL EM G SP V+YN K
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV 204
Query: 352 KDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG-------------------- 391
+ D AL LF M + G+ P T +++ + +IG
Sbjct: 205 NNVDKALYLFNTMNKYGI-RPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL 263
Query: 392 -----------------VVK--EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
VV+ E+W++M + V D +Y ++I GLC A F
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQ 456
+M+++G P T+ TL L +
Sbjct: 324 CDMVKRGVNPDVFTYNTLISALCK 347
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 179/439 (40%), Gaps = 85/439 (19%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
+L+L ++ S ++++++ + + +QFD+A L EM QR+L P+ T+ LI
Sbjct: 138 SLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLI 197
Query: 142 RRL--------------------VSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
VS + L LC Y A +F+ KR
Sbjct: 198 TSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK---AISIFSRLKRS 254
Query: 182 CRFNPDVKMYTVLI--YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLN------GV 233
PD+ Y +I YG KL R A+ + EM E G+ PN V+Y+ LL+
Sbjct: 255 G-ITPDLVAYNSMINVYGKAKLFR--EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 234 CRKVSLHPEER-----FERT--------------IRDADKVFDEMRERGIEPDVTSFSIV 274
+S+ E + + T +++AD++F +R+ IEP+V S++ +
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTI 371
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
L VY A ++ FR+M+ + I V TY ++IK E A L EM G+
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
P A+TY+ + D A LF+K++ G+ Y ++ + + ++G K
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV-LYQTMIVAYERVGLMGHAK 490
Query: 395 EIWRDMK-------------------------------ESGVGPDLDLYTLLIHGLCERK 423
+ ++K ESG D+ ++ +I+ +
Sbjct: 491 RLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ 550
Query: 424 KWREACQFFVEMIEKGFLP 442
++ + F +M G+ P
Sbjct: 551 RYVNVIEVFEKMRTAGYFP 569
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 115/271 (42%), Gaps = 11/271 (4%)
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
++ P V Y V++ + + + A +EM +R + P+ TY+ L+ S
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLI------TSFGK 202
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
E F+ + +M + + D+ +S ++ + R ++ F +K GI P
Sbjct: 203 EGMFDSAL----SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITP 258
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
+ Y S+I +A L EM +GV P V+Y+ Y AL +F
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
+MKE C+ T +++ ++ + DM+ ++ +++ + P++ Y ++ E
Sbjct: 319 AEMKEVN-CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE 377
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
+ + EA F M K VT+ T+ +
Sbjct: 378 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 153/382 (40%), Gaps = 74/382 (19%)
Query: 82 ALSLFNYAK-SLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
A+S+F+ K S P L +++ +I+ K + F A LI EM++ + PN ++ L
Sbjct: 244 AISIFSRLKRSGITPDLV--AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 141 IRRLVSDTK--------------------TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKR 180
+ V + K TT +++D + VK A +F + R
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTC---NIMIDVYGQLDMVKEADRLF-WSLR 357
Query: 181 HCRFNPDVKMYTVL--IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
P+V Y + +YG +L A M + IE NVVTYN ++ + K
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAEL--FGEAIHLFRLMQRKDIEQNVVTYNTMIK-IYGKTM 414
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
H + A + EM+ RGIEP+ ++S ++ ++ +A K + F+ ++ G
Sbjct: 415 EHEK---------ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 299 I-------------------------------CPTVATYTSVIKCLASCGRLEDAEGLFD 327
+ P + I LA GR E+A +F
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFR 525
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKA 387
+ SG + C Y + + +++F+KM+ G P ++ ++L + K
Sbjct: 526 QAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF-PDSNVIAMVLNAYGKQ 584
Query: 388 DMIGVVKEIWRDMKESG-VGPD 408
++R+M+E G V PD
Sbjct: 585 REFEKADTVYREMQEEGCVFPD 606
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
L E ++R++ D V +E + P V ++++VL RA + ++ F M+++
Sbjct: 129 LSRENDWQRSLALLDWVHEEAK---YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA 185
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+ P TY+++I G + A +M + VS V Y+ + R D A+
Sbjct: 186 LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI 245
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
+F ++K G+ +P Y ++ ++ KA + + + ++M E+GV P+ Y+ L+
Sbjct: 246 SIFSRLKRSGI-TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
E K+ EA F EM E T + Q DM++ RL
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 11/270 (4%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P+V Y +I G+C L RVE A L +M +G P+ V+Y ++ +C++
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE--------- 360
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
+R + D + +E G+ PD +++ ++H+ ++ +L + +E+G
Sbjct: 361 KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG 420
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSG-VSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
Y++++ L GR+ +A+ L +EM+ G P VTY + + D A KL + M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
G P +Y LL + +E+ +E P+ Y++++HGL K
Sbjct: 481 HTHGH-KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGL 454
EAC EM+ KGF P V L + L
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSL 569
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 27/307 (8%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNG--NKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLN 212
++ ++ LCK G + A ++ N +K HC PDV YT ++ G+C+LG V+ A+ L
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHC--PPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 213 EMVERGIEPNVVTYNVLLNGVCRK-VSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
M G +PN V+Y LLNG+CR SL +A ++ + E P+ ++
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSL-----------EAREMMNMSEEHWWSPNSITY 527
Query: 272 SIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR 331
S+++H R K + D R M +G P +++ L GR +A +E +
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 332 SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH--TYGVLLQMFLKADM 389
G + V + + + D+AL + M L + A TY L+ K
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY---LINKHADVFTYTTLVDTLGKKGR 644
Query: 390 IGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
I E+ + M G+ P Y +IH C+ K + V ++EK QK T
Sbjct: 645 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD----LVAILEKMISRQKC--RT 698
Query: 450 LYRGLIQ 456
+Y +I+
Sbjct: 699 IYNQVIE 705
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 122/288 (42%), Gaps = 13/288 (4%)
Query: 169 KLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNV 228
++A + F R R+ D +Y ++ K + ++ L M RGI ++
Sbjct: 188 RVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSR 247
Query: 229 LLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSL 288
++ R L RDA KV M+ G+EP++ + + V+ RA++ + +L
Sbjct: 248 VMVSYSRAGQL----------RDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKAL 297
Query: 289 DKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY 348
M+ GI P V TY +I+ R+E+A L ++M G P V+Y
Sbjct: 298 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL 357
Query: 349 RGRKDADSALKLFKKM-KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
K L KKM KE GL P TY L+ M K D +D +E G
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLV-PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK-VTFETLYRGL 454
D Y+ ++H LC+ + EA EM+ KG P VT+ + G
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 38/285 (13%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE------- 153
S+ L++ M + + A +++ ++ +PN T+ V++ L + K +
Sbjct: 491 SYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM 550
Query: 154 ----------HFTVLLDTLCKYGYV----KLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
+LL +LC+ G K E N + C N V +T +I+G+C
Sbjct: 551 VLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN---KGCAIN--VVNFTTVIHGFC 605
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
+ ++ A S L++M +V TY L++ + +K I +A ++ +M
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKK----------GRIAEATELMKKM 655
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
+GI+P ++ V+H Y + K + M + C T+ Y VI+ L G+L
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKL 713
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
E+A+ L +++R+ A T + Y + SA K+ +M
Sbjct: 714 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 758
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 44/211 (20%)
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
D + +L V S+ Q S +MK +GI T ++ V+ + G+L DA +
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 327 DEMVRSGVSP----CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
M R+GV P C T + F + R K AL+ ++M+
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEK----ALRFLERMQ----------------- 304
Query: 383 MFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
++G+V P++ Y +I G C+ + EA + +M KG LP
Sbjct: 305 ------VVGIV-------------PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345
Query: 443 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 473
KV++ T+ L + + R L KK+ +E
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 161/358 (44%), Gaps = 32/358 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F+ +I+ ++ + A Q + +M + L P ST+ LI+ K E + LLD
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK--PERSSELLDL 175
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
+ + G V + P+++ + VL+ WCK +VE A + +M E G+ P
Sbjct: 176 MLEEGNVDVG--------------PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM--RERGIEPDVTSFSIVLHVYS 279
+ VTYN + +K T+R +V ++M +E+ +P+ + IV+ Y
Sbjct: 222 DTVTYNTIATCYVQK---------GETVRAESEVVEKMVMKEKA-KPNGRTCGIVVGGYC 271
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
R + + L R MKE + + + S+I + + + M V +
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVI 331
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
TY+ + + A ++FK+M + G+ P AH Y +L + +++A +E+
Sbjct: 332 TYSTVMNAWSSAGYMEKAAQVFKEMVKAGV-KPDAHAYSILAKGYVRAKEPKKAEELLET 390
Query: 400 M-KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+ ES P++ ++T +I G C +A + F +M + G P TFETL G ++
Sbjct: 391 LIVESR--PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 22/274 (8%)
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT 248
K+ VLI + GR AQ+ + E G P++++Y LL + ++
Sbjct: 50 KLMNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT----------VQKQ 95
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+ E+ + G + D F+ V++ +S + + ++ MKE G+ PT +TY +
Sbjct: 96 YGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNT 155
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSG---VSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
+IK G+ E + L D M+ G V P T+N + + +K + A ++ KKM+
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 366 EDGLCSPTAHTYGVLLQMFL-KADMIGVVKEIWRD--MKESGVGPDLDLYTLLIHGLCER 422
E G+ P TY + ++ K + + E+ MKE P+ +++ G C
Sbjct: 216 ECGV-RPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA-KPNGRTCGIVVGGYCRE 273
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+ R+ +F M E V F +L G ++
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 24/280 (8%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
D + +I + + G +E A L +M E G+ P TYN L+ G ++ PE E
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY--GIAGKPERSSE 171
Query: 247 RTIRDADKVFDEMRERG---IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
+ D M E G + P++ +F++++ + + K + + + + M+E G+ P
Sbjct: 172 --------LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 304 ATYTSVIKCLASCGRLEDAEG------LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSA 357
TY ++ C G AE + E + C + + +E R R
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR----DG 279
Query: 358 LKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH 417
L+ ++MKE + + L+ F++ + E+ MKE V D+ Y+ +++
Sbjct: 280 LRFVRRMKEMRV-EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMN 338
Query: 418 GLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+A Q F EM++ G P + L +G +++
Sbjct: 339 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 378
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
RT+R K+ + + ERG R H+ Q F+ + E G P++ +Y
Sbjct: 43 RTVRSRTKLMNVLIERG----------------RPHEAQTV---FKTLAETGHRPSLISY 83
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
T+++ + + + E+ +SG ++ +N + + + A++ KMKE
Sbjct: 84 TTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKE 143
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG---VGPDLDLYTLLIHGLCERK 423
GL +PT TY L++ + A E+ M E G VGP++ + +L+ C++K
Sbjct: 144 LGL-NPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
K EA + +M E G P VT+ T+ +Q
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
++ +++ GY++ AA+VF PD Y++L G+ + + A+ L +
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFK-EMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 391
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+ PNVV + +++G C S+ DA +VF++M + G+ P++ +F +
Sbjct: 392 IVES-RPNVVIFTTVISGWCSNGSMD----------DAMRVFNKMCKFGVSPNIKTFETL 440
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
+ Y +P + + +MM+ G+ P +T+
Sbjct: 441 MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 32/348 (9%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV-- 139
ALSLF +AK P S + +L D + + R F L EM Q S + +F
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 140 -LIRRLV-----------------SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH 181
+I+ L S K ++ + L+ G A E++ ++
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 307
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
D Y ++I K GR++ A +M ER + P+ ++ L++ S+
Sbjct: 308 DSL-LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD------SMGK 360
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
R + ++ KV+ EM+ G P T F ++ Y++A K +L + MK+ G P
Sbjct: 361 AGRLDTSM----KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
YT +I+ A G+LE A +F +M ++G P TY+C + + G DSA+K++
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
M GL P +Y LL + ++ V +I +MK G D+
Sbjct: 477 NSMTNAGL-RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 8/283 (2%)
Query: 168 VKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYN 227
V A +F K+ + P + Y VL G + QS EMV+ +++N
Sbjct: 185 VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFN 244
Query: 228 VLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLS 287
N V + L E+ E A F + +E G + D +++ ++ ++ P +
Sbjct: 245 AY-NQVIQY--LAKAEKLEV----AFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKA 297
Query: 288 LDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE 347
+ + M++ +TY +I LA GRL+ A LF +M + P ++
Sbjct: 298 FEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDS 357
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
D+++K++ +M+ G P+A + L+ + KA + +W +MK+SG P
Sbjct: 358 MGKAGRLDTSMKVYMEMQGFG-HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ LYT++I + K A F +M + GFLP T+ L
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 132/304 (43%), Gaps = 17/304 (5%)
Query: 151 TSEHFTVLLDTLCK----YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVET 206
+ E + VL D L + G L E+ + H + Y +I K ++E
Sbjct: 204 SDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLS--FNAYNQVIQYLAKAEKLEV 261
Query: 207 AQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
A + E G + + TYN L+ K P + FE +++ M +
Sbjct: 262 AFCCFKKAQESGCKIDTQTYNNLMMLFLNKG--LPYKAFE--------IYESMEKTDSLL 311
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
D +++ +++ +++ + + F+ MKE+ + P+ + ++S++ + GRL+ + ++
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
EM G P A + Y D+AL+L+ +MK+ G P Y ++++ K
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGF-RPNFGLYTMIIESHAK 430
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+ + V +++DM+++G P Y+ L+ + A + + M G P +
Sbjct: 431 SGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Query: 447 FETL 450
+ +L
Sbjct: 491 YISL 494
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 115/296 (38%), Gaps = 30/296 (10%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A LF K P S S F L+D+M K + D + ++ EM P+ + F+ LI
Sbjct: 332 AFKLFQQMKERKLRP-SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Query: 142 R------------RLVSDTKTTSEH-----FTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
RL + K + +T+++++ K G +++A VF + F
Sbjct: 391 DSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK-DMEKAGF 449
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER 244
P Y+ L+ G+V++A N M G+ P + +Y LL + K
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANK-------- 501
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
R + A K+ EM+ G DV + S VL +Y + L+L R M GI
Sbjct: 502 --RLVDVAGKILLEMKAMGYSVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNF 558
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
+ + G + A L + +V S V Y +D D +L
Sbjct: 559 IIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQL 614
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 152 SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPD--VKMYTVLIYGWCKLGRVETAQS 209
SE F + + L YGY +A N + VK + L+ + +++ A
Sbjct: 121 SEDFVIRIMLL--YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMK 178
Query: 210 FLNEMVER-GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
E+ E+ GI P++VTYN ++ +CRK S+ D +F+E+ + G EPD+
Sbjct: 179 TFKELPEKLGITPDLVTYNTMIKALCRKGSMD----------DILSIFEELEKNGFEPDL 228
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFR---MMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
SF+ +L + R +L ++ R +MK + + P + +Y S ++ L + DA L
Sbjct: 229 ISFNTLLEEFYRR---ELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNL 285
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
D M G+SP TYN YR + + +K + +MKE GL +P TY +L+ +
Sbjct: 286 IDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL-TPDTVTYCMLIPLLC 344
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
K + E+ + + + ++Y ++ L K EA Q
Sbjct: 345 KKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GICPTVATYTSVI 310
A K+FDEM E E V SF+ +L Y + K ++ F+ + E+ GI P + TY ++I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY---------------------- 348
K L G ++D +F+E+ ++G P +++N +E+
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 349 --------------RGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
R +K D AL L MK +G+ SP HTY L+ + + + V
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTD-ALNLIDVMKTEGI-SPDVHTYNALITAYRVDNNLEEVM 318
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
+ + +MKE G+ PD Y +LI LC++ A + E I+ L
Sbjct: 319 KCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 151 TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSF 210
T + F LL + A + F PD+ Y +I C+ G ++ S
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSI 215
Query: 211 LNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI-RDADKVFDEMRERGIEPDVT 269
E+ + G EP+++++N LL EE + R + + D+++D M+ + + P++
Sbjct: 216 FEELEKNGFEPDLISFNTLL-----------EEFYRRELFVEGDRIWDLMKSKNLSPNIR 264
Query: 270 SFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
S++ + +R K +L+ +MK +GI P V TY ++I LE+ ++EM
Sbjct: 265 SYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 330 VRSGVSPCAVTY 341
G++P VTY
Sbjct: 325 KEKGLTPDTVTY 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%)
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH 375
G E A LFDEM ++N Y K D A+K FK++ E +P
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 376 TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEM 435
TY +++ + + + I+ +++++G PDL + L+ R+ + E + + M
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 436 IEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYR 490
K P ++ + RGL ++ L + E IS N + YR
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 170/417 (40%), Gaps = 24/417 (5%)
Query: 80 KIALSLFNYAKSLPNPPLSHSSFH---LLIDTMAKVRQFDLAWQLITE-MDQRSLTPNPS 135
K+AL +N+ S + F ++I + R+FD A ++ M +P
Sbjct: 72 KLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPL 131
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
L + R ++ + F L+ + G + A EV R F V +
Sbjct: 132 HVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIE-QTRAEGFCVSVHALNNFM 190
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
+ ++ EM G NV T+N+++ C+ E + +A V
Sbjct: 191 GCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCK----------ESKLFEALSV 240
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD---KFRMMKEQGICPTVATYTSVIKC 312
F M + G+ P+V SF++++ + + +L K MM + P TY SVI
Sbjct: 241 FYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVING 300
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
GRL+ AE + +MV+SGV TY Y +D AL+L +M GL
Sbjct: 301 FCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN 360
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
T ++ +F++ D+ G + + RDM + D +++ GLC +EA +F
Sbjct: 361 TVIYNSIVYWLFMEGDIEGAMS-VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESISFGSEFQNY 484
++ EK + V TL ++ L + L + L ++ISFG+ Y
Sbjct: 420 RQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGY 476
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 157/419 (37%), Gaps = 87/419 (20%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRS---LTPNPSTFLVLIRRLVSDTKTTSEHFTV 157
SF+++ID K A QL+ +M S ++PN T+
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY------------------NS 296
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
+++ CK G + LA E G+ + + + Y L+ + + G + A +EM +
Sbjct: 297 VINGFCKAGRLDLA-ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 218 GIEPNVVTYN-----------------------------------VLLNGVCRKVSLHPE 242
G+ N V YN +++ G+CR +
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 243 ERFERTI--------------------RD-----ADKVFDEMRERGIEPDVTSFSIVLHV 277
F+R I RD AD++ M +G+ D SF ++
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
Y + K + +L+ + M + + Y S++ L+ G AE + + M +
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI--- 532
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKM-KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
VTYN E + + A + KM K+DG S + T+ +++ K KE+
Sbjct: 533 -VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLI 455
+ M E GV PD Y LI + + + + +I +G P + + ++ R L+
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 173/437 (39%), Gaps = 60/437 (13%)
Query: 93 PNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD----- 147
P+P S+ L+ + + A LI EMD ++ + T L R V
Sbjct: 400 PDPV----SYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEK 455
Query: 148 -----------TKTTSEHFTVLLDTLCKYGYVKLAAEVF----NGNKRHCRFNPDVKMYT 192
+SE ++ +D + GY+ A VF NKR V Y
Sbjct: 456 SWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKR------TVIEYN 509
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD- 251
V+I + E A M+ G+ P+ TYN L+ + H + +R+
Sbjct: 510 VMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRET 569
Query: 252 ------------------------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLS 287
A++V+ EM E IEPDV + ++++ ++ Q +
Sbjct: 570 GYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQA 629
Query: 288 LDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS---PCAVTYNCF 344
+ MKE GI Y S+IK G L++AE ++ ++++S P T NC
Sbjct: 630 MSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCM 689
Query: 345 FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
Y R A +F MK+ G T+ ++L M+ K +I + M+E
Sbjct: 690 INLYSERSMVRKAEAIFDSMKQRG--EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMK 747
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
+ D Y ++ +++EA + F EM+ G P TF++L L++ M +
Sbjct: 748 ILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAV 807
Query: 465 RLKKKLDEESISFGSEF 481
R +++ ++ I G E
Sbjct: 808 RKIEEIRKKEIKRGLEL 824
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 19/305 (6%)
Query: 171 AAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLL 230
A E+F K + +V Y +++ K + QS +EM+ +GI+P TY L+
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 231 NGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDK 290
+ V K L A +M + G++PD + IVL +Y +A + Q + +
Sbjct: 230 D-VYSKGGLKVH---------ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEF 279
Query: 291 FRMMK------EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
F+ + +C + TY ++I G++++A F M+ G+ P VT+N
Sbjct: 280 FKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTM 339
Query: 345 FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
Y L K MK C+P TY +L+ + K + I +++MK+ G
Sbjct: 340 IHIYGNNGQLGEVTSLMKTMKLH--CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDG 397
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML-RTW 463
+ PD Y L++ R EA EM + + T L R ++++ML ++W
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW 457
Query: 464 RRLKK 468
K+
Sbjct: 458 SWFKR 462
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 156/398 (39%), Gaps = 39/398 (9%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
LS +++ +IDT K Q A + M + + P TF +I + T
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIH--IYGNNGQLGEVT 353
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
L+ T+ K HC PD + Y +LI K +E A ++ EM +
Sbjct: 354 SLMKTM----------------KLHCA--PDTRTYNILISLHTKNNDIERAGAYFKEMKD 395
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
G++P+ V+Y LL + +A+ + EM + +E D + S +
Sbjct: 396 DGLKPDPVSYRTLLYAF----------SIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR 445
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF---DEMVRSG 333
+Y A + S F+ G + Y++ I G L +AE +F E+ +
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNMSSEG-YSANIDAYGERGYLSEAERVFICCQEVNKRT 504
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
V + YN K Y K + A +LF+ M G+ +P TY L+Q+ ADM
Sbjct: 505 V----IEYNVMIKAYGISKSCEKACELFESMMSYGV-TPDKCTYNTLVQILASADMPHKG 559
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+ M+E+G D Y +I + + A + + EM+E P V + L
Sbjct: 560 RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINA 619
Query: 454 LIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYRR 491
+ ++ + + E I S N +K Y +
Sbjct: 620 FADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 144/360 (40%), Gaps = 36/360 (10%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL-----IRRLVSDTK---TTS 152
++++LI K + A EM L P+P ++ L IR +V + +
Sbjct: 369 TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Query: 153 EHFTVLLDTLCKYGYVKLAAEV------FNGNKR-HCRFNPDVKMYTVLIYGWCKLGRVE 205
+ V +D + ++ E ++ KR H N + Y+ I + + G +
Sbjct: 429 DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLS 488
Query: 206 TAQSFL---NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
A+ E+ +R V+ YNV++ ++ A ++F+ M
Sbjct: 489 EAERVFICCQEVNKR----TVIEYNVMIKAY----------GISKSCEKACELFESMMSY 534
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G+ PD +++ ++ + + A P M+E G Y +VI G+L A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
E ++ EMV + P V Y + + A+ + MKE G+ + Y L++
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSV-IYNSLIK 653
Query: 383 MFLKADMIGVVKEIWRDMKESGVG---PDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
++ K + + I+R + +S PD+ +I+ ER R+A F M ++G
Sbjct: 654 LYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG 713
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 160/411 (38%), Gaps = 37/411 (9%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------RRLVSDT- 148
+ L+ K +A +L M +RS +P F LI R + S
Sbjct: 275 YTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMI 334
Query: 149 --KTTSEHFT--VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
S FT +++ + CK G V A +F N + +V YT LI+G+ K G +
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD------------- 251
+ A L M++ GI P+ +TY VLL + + L ++I D
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL 454
Query: 252 ------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
+ + E+ + ++V +L + M G P +
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y SVIKCL +ED L + + P TY E + D D+A + M+
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
E GL PT Y ++ K + +E + M ESG+ PD Y ++I+ +
Sbjct: 575 ELGL-RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
EA + E+++ P T+ L G ++ M+ + K+ E+ +S
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLS 684
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 154/371 (41%), Gaps = 29/371 (7%)
Query: 115 FDLAWQLITEMDQRSLTPNPSTFLVLIRRL--VSDTKTTSEHFTVLLDTLC--------K 164
D A L+ M + P+ T+ VL++ L + K +LD C
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD 453
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
G +++ E G N V+ C A S + +MV G P
Sbjct: 454 LGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPF 513
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
+YN ++ + + E I D + + ++E PDV ++ IV++ + +
Sbjct: 514 SYNSVIKCLFQ----------ENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
+ M+E G+ PTVA Y+S+I L GR+ +AE F +M+ SG+ P + Y
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 345 FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG 404
Y D A +L +++ + L P++ TY VL+ F+K M+ + M E G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFL-RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682
Query: 405 VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
+ P++ LYT LI ++ ++ + F M E + + TL GL WR
Sbjct: 683 LSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL--------WR 734
Query: 465 RLKKKLDEESI 475
+ +K + I
Sbjct: 735 AMARKKKRQVI 745
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 177/437 (40%), Gaps = 70/437 (16%)
Query: 84 SLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-- 141
SL N + L P ++ ++++ + K D A+ +I M++ L P + + +I
Sbjct: 533 SLVNIIQELDFVP-DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGS 591
Query: 142 ---------------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNP 186
+ L S + + ++++T + G + A E+ +H P
Sbjct: 592 LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKH-FLRP 650
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
YTVLI G+ K+G +E +L++M+E G+ PNVV Y L+ +K + +F
Sbjct: 651 SSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK----GDFKFS 706
Query: 247 RTIRDADKVFDEMRERGIEPD----VTSFSIVLHVYSRAHKPQLSLD--KFRMMK----- 295
T+ F M E I+ D +T S + +R K Q+ ++ K ++++
Sbjct: 707 FTL------FGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT 760
Query: 296 --------------------------EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
++ I P + + ++I + GRL++A + M
Sbjct: 761 KPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESM 820
Query: 330 VRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADM 389
+ G+ P VTY K + D +SA+ LF E C P Y LL+
Sbjct: 821 QKEGIVPNLVTYTILMKSHIEAGDIESAIDLF----EGTNCEPDQVMYSTLLKGLCDFKR 876
Query: 390 IGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
+ +M++SG+ P+ D Y L+ LC + EA + +M P+ +
Sbjct: 877 PLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTW 936
Query: 450 LYRGLIQSDMLRTWRRL 466
L L + LR R L
Sbjct: 937 LIYILCEEKKLREARAL 953
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/380 (18%), Positives = 143/380 (37%), Gaps = 93/380 (24%)
Query: 158 LLDTLCKYGYVKLAAEVFNG-----NKRHCR--------------FNPDVKMYTVLI--- 195
+LDTLC + L ++ KR C + D MYT L+
Sbjct: 223 MLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEY 282
Query: 196 --------------------------------YGWCKLGRVETAQSFLNEMVERGIEPNV 223
+G+ KLG ++ + ++M+++G++ NV
Sbjct: 283 CKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNV 342
Query: 224 VTYNVLLNGVCRK----------VSLHPEERFERTIR-------------DADKVFD--- 257
TY++++ C++ V+ E R + DK D
Sbjct: 343 FTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLM 402
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ--GICPTVATYTSVIKCLAS 315
M + GI PD ++ ++L + + H+ + ++ + + + GI P V +
Sbjct: 403 RMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPV---------IDD 453
Query: 316 CGRLE-DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G +E E L E+ R + AV +++ +AL +KM G C+P
Sbjct: 454 LGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLG-CTPLP 512
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
+Y +++ + ++I + + ++E PD+D Y ++++ LC++ A
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 435 MIEKGFLPQKVTFETLYRGL 454
M E G P + ++ L
Sbjct: 573 MEELGLRPTVAIYSSIIGSL 592
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 135/348 (38%), Gaps = 47/348 (13%)
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
L LC +G++ A + + R V +Y L Y +CK G A++ + M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHV 277
G + V Y L+ C+ + + A +++ M ER E D F+ ++H
Sbjct: 267 GYYVDKVMYTCLMKEYCK----------DNNMTMAMRLYLRMVERSFELDPCIFNTLIHG 316
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
+ + F M ++G+ V TY +I G ++ A LF + +G
Sbjct: 317 FMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF--VNNTGSEDI 374
Query: 338 AVTYNCF----FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+ +C+ F Y+ + D A+ L +M ++G+ P TY VLL+M K +
Sbjct: 375 SRNVHCYTNLIFGFYK-KGGMDKAVDLLMRMLDNGIV-PDHITYFVLLKMLPKCHELKYA 432
Query: 394 KEIWRDMKESGVG---PDLD--------------------------LYTLLIHGLCERKK 424
I + + ++G G P +D ++ LC ++
Sbjct: 433 MVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRN 492
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
+ A +M+ G P ++ ++ + L Q +++ L + E
Sbjct: 493 YIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQE 540
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 164/419 (39%), Gaps = 65/419 (15%)
Query: 89 AKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDT 148
+ S P P S+F+ LID K + + A L +EM L S
Sbjct: 295 SDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEM------------------LKSGV 336
Query: 149 KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ 208
+ F ++ T +G++ A + + +PD K Y +L+ G +E A
Sbjct: 337 PIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK-GISPDTKTYNILLSLHADAGDIEAAL 395
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
+ ++ + G+ P+ VT+ +L+ +C++ + + + + V EM I D
Sbjct: 396 EYYRKIRKVGLFPDTVTHRAVLHILCQR----------KMVAEVEAVIAEMDRNSIRIDE 445
Query: 269 TSFSIVLHVY--------SRAHKPQLSLD----------KFRMMKEQGICPTVAT----- 305
S +++ +Y ++A + LD + E+G+ T
Sbjct: 446 HSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGK 505
Query: 306 ------------YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
Y +IK E A LF M G P TYN F+ G
Sbjct: 506 RNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDL 565
Query: 354 ADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYT 413
D A ++ +M + G C P TY ++ +++ ++ +++ M+++GV P+ +Y
Sbjct: 566 VDEAQRILAEMLDSG-CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYG 624
Query: 414 LLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
LI+G E EA Q+F M E G + +L + + L RR+ K+ +
Sbjct: 625 SLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 146/383 (38%), Gaps = 64/383 (16%)
Query: 121 LITEMDQRSLTPNPSTFLVLIRRLVS----------------DTKTTSEHFTVLLDTLCK 164
+I EMD+ S+ + + V+++ V+ D +S ++D +
Sbjct: 432 VIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAE 491
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
G A VF G + DV Y V+I + K E A S M +G P+
Sbjct: 492 KGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDEC 551
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
TYN L + V L + +A ++ EM + G +P +++ ++ Y R
Sbjct: 552 TYNSLFQ-MLAGVDL---------VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
++D + M++ G+ P Y S+I A G +E+A F M GV +
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 345 FKEYRGRKDADSALKLFKKMK-----------------------------------EDGL 369
K Y + A +++ KMK E G
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT 721
Query: 370 CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
C ++ ++ ++ M+ E+ +M+ESG+ D + ++ + E C
Sbjct: 722 CDVI--SFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECC 779
Query: 430 QFFVEM-IEKGFLPQKVTFETLY 451
+ F EM +E+ L TF+TL+
Sbjct: 780 ELFHEMLVERKLLLDWGTFKTLF 802
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 119/317 (37%), Gaps = 66/317 (20%)
Query: 174 VFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV 233
VF + H + P+V Y +++ + G+ + + EM G+ P TY +L++ V
Sbjct: 131 VFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVD-V 189
Query: 234 CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR------------- 280
K L +++A M +R PD + + V+ V+
Sbjct: 190 YGKAGL---------VKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKG 240
Query: 281 --AHKPQLSLDKFRMMKEQGICPT------------------------------------ 302
A K L LD + G +
Sbjct: 241 WCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPR 300
Query: 303 ----VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
+T+ ++I GRL DA LF EM++SGV VT+N A
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
L KKM+E G+ SP TY +LL + A I E +R +++ G+ PD + ++H
Sbjct: 361 SLLKKMEEKGI-SPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 419 LCERKKWREACQFFVEM 435
LC+RK E EM
Sbjct: 420 LCQRKMVAEVEAVIAEM 436
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 172/414 (41%), Gaps = 37/414 (8%)
Query: 76 KHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPS 135
K H K ALSLF K+ P +++ L +A V D A +++ EM P
Sbjct: 529 KLHEK-ALSLFKGMKNQGTWP-DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 136 TFLVLIRR-----LVSDT------------KTTSEHFTVLLDTLCKYGYVKLAAEVFNGN 178
T+ +I L+SD K + L++ + G V+ A + F
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 179 KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVS 238
+ H + + + T LI + K+G +E A+ ++M + P+V N +L+ +C +
Sbjct: 647 EEHGVQSNHIVL-TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS-LCADLG 704
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
+ + +A+ +F+ +RE+G DV SF+ ++++Y +++ M+E G
Sbjct: 705 I---------VSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESG 754
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMV--RSGVSPCAVTYNCFFKEYRGRKDADS 356
+ ++ V+ C A+ G+L + LF EM+ R + F +G +++
Sbjct: 755 LLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Query: 357 ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI 416
+L E P A T + +F + E +++ + + Y +I
Sbjct: 815 VSQLQTAYNE---AKPLA-TPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVI 870
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
+ A + ++ M EKG P VT L ++ M+ +R+ +L
Sbjct: 871 YTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 24/274 (8%)
Query: 151 TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL---------------I 195
T+ + +L+D K G VK A + F +V M TV+
Sbjct: 179 TNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF 238
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
GWC G+V+ +++ + G + V L+ KV E+++ A
Sbjct: 239 KGWCA-GKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVG--ARNPIEKSLHFASGS 295
Query: 256 FDEMRERGIEPDVTS-FSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
R+ P +TS F+ ++ +Y +A + + + F M + G+ T+ ++I
Sbjct: 296 DSSPRK----PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCG 351
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
+ G L +AE L +M G+SP TYN + D ++AL+ ++K+++ GL P
Sbjct: 352 THGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLF-PDT 410
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD 408
T+ +L + + M+ V+ + +M + + D
Sbjct: 411 VTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRID 444
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 165/400 (41%), Gaps = 87/400 (21%)
Query: 140 LIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
++R L+ +++ + +++LCK+ ++ A + R PDV Y LI G+
Sbjct: 1 MVRGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVL-PDVITYNTLIKGYT 59
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
+ ++ A + M E GIEP+V TYN L++G + + L+ R + ++FDEM
Sbjct: 60 RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN------RVL----QLFDEM 109
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ----GICPTVATYTSVIKCLAS 315
G+ PD+ S++ ++ Y + + + F+++ E G+ P + TY ++ L
Sbjct: 110 LHSGLSPDMWSYNTLMSCYFKLGRHG---EAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 316 CGRLEDAEGLFD----------------------------------EMVRSGVSPCAVTY 341
G ++A LF E+ +SG +P AVTY
Sbjct: 167 SGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGL-------CSPTAH------------------- 375
K Y K + L+LF KMK++G C+ +
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 376 ---------TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
+Y LL ++ K + V ++ +++ G+ PD +T++++GL
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
A + + E G P VT L GL ++ + RL
Sbjct: 347 GAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 29/267 (10%)
Query: 221 PNVVT--YNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
P + T N+ +N +C+ +L ER E + D ++ G+ PDV +++ ++ Y
Sbjct: 9 PGISTKLLNISVNSLCKFRNL---ERAETLLIDGIRL-------GVLPDVITYNTLIKGY 58
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+R + R M+E GI P V TY S+I A L LFDEM+ SG+SP
Sbjct: 59 TRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDM 118
Query: 339 VTYN----CFFKEYRGRKDADSALKLFKKMKED----GLCSPTAHTYGVLLQMFLKADMI 390
+YN C+FK GR + FK + ED GL P TY +LL K+
Sbjct: 119 WSYNTLMSCYFK--LGRHG-----EAFKILHEDIHLAGLV-PGIDTYNILLDALCKSGHT 170
Query: 391 GVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
E+++ +K S V P+L Y +LI+GLC+ ++ E+ + G+ P VT+ T+
Sbjct: 171 DNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 451 YRGLIQSDMLRTWRRLKKKLDEESISF 477
+ ++ + +L K+ +E +F
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 120/310 (38%), Gaps = 46/310 (14%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-------------RRLVS 146
++++ LI AK + QL EM L+P+ ++ L+ + L
Sbjct: 84 TTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE 143
Query: 147 DTKTTS-----EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
D + + +LLD LCK G+ A E+F K R P++ Y +LI G CK
Sbjct: 144 DIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS--RVKPELMTYNILINGLCKS 201
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD---- 257
RV + + E+ + G PN VTY +L + + + ++ FD
Sbjct: 202 RRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN 261
Query: 258 ---------------------EMRERGIEP-DVTSFSIVLHVYSRAHKPQLSLDKFRMMK 295
E+ G D+ S++ +L++Y + D ++
Sbjct: 262 CAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIE 321
Query: 296 EQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDAD 355
+G+ P T+T ++ L + G AE + G+ P VT NC D
Sbjct: 322 MKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVD 381
Query: 356 SALKLFKKMK 365
A++LF M+
Sbjct: 382 RAMRLFASME 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 78 HSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF 137
H+ A+ LF + KS P L ++++LI+ + K R+ ++ E+ + TPN T+
Sbjct: 169 HTDNAIELFKHLKSRVKPELM--TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 138 LVLIRRLVSDT----------KTTSEHFT-------VLLDTLCKYGYVKLAAEVFNGNKR 180
+++ K E +T ++ L K G + A E + R
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 181 HCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH 240
+ D+ Y L+ + K G ++ L E+ +G++P+ T+ +++NG+ +
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
E+ I E G++P V + + ++ +A ++ F M+ +
Sbjct: 347 GAEKHLACIG----------EMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR--- 393
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLF 326
TYTSV+ L GRL A L
Sbjct: 394 -DEFTYTSVVHNLCKDGRLVCASKLL 418
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 26/345 (7%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
+++++ C+ G V A + +V Y LI G+ +G VE L M
Sbjct: 229 SIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 288
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEER-FE----------------------RT--IR 250
ERG+ NVVTY L+ G C+K + E FE RT IR
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
DA +V D M E G+ + T + +++ Y ++ + + F M + + P TY +++
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
G +++A L D+M + V P +TYN K Y L L+K M + G+
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
+ +L +F D +K +W ++ G+ D ++I GLC+ +K EA +
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMK-LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Query: 431 FFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
+ P T++ L G + L+ +K+ ++ + I
Sbjct: 528 ILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 156/382 (40%), Gaps = 53/382 (13%)
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
VL R L++DT T V++ LCK V A E+ + N R P V+ Y L +G+
Sbjct: 497 VLARGLLTDTIT----LNVMISGLCKMEKVNEAKEILD-NVNIFRCKPAVQTYQALSHGY 551
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
K+G ++ A + M +GI P + YN L++G + L+ + AD V E
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN---------KVADLVI-E 601
Query: 259 MRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGR 318
+R RG+ P V ++ ++ + + M E+GI V + + L +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661
Query: 319 LEDAEGLFDEMV--------------------------------------RSGVSPCAVT 340
+++A L ++V + + P +
Sbjct: 662 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIV 721
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN + A KLF + P +TY +L+ A I + +M
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
G+ P++ Y LI GLC+ A + ++ +KG P +T+ TL GL++S +
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Query: 461 RTWRRLKKKLDEESISFGSEFQ 482
RLK+K+ E+ + GS+ Q
Sbjct: 842 AEAMRLKEKMIEKGLVRGSDKQ 863
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 145/365 (39%), Gaps = 51/365 (13%)
Query: 173 EVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV----------------- 215
E+FN + +F PD K Y +++ + + +S+L E+V
Sbjct: 89 EIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVF 148
Query: 216 -ERGIEPNV--VTYNVLLNGVCRKVSLHPEERFER----------------TIRDADK-- 254
E P V + V K +LH + +R +
Sbjct: 149 KEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFV 208
Query: 255 ---VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-----GICPTVATY 306
V+D+M + PDV + SIV++ Y R+ ++DK + ++ G+ V TY
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSG----NVDKAMVFAKETESSLGLELNVVTY 264
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
S+I A G +E + M GVS VTY K Y + + A +F+ +KE
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
L + H YGVL+ + + I + +M E GV + + LI+G C+ +
Sbjct: 325 KKLVADQ-HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQL 486
EA Q F M + P T+ TL G ++ + +L ++ ++ + N L
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 487 KPYRR 491
K Y R
Sbjct: 444 KGYSR 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 117/315 (37%), Gaps = 64/315 (20%)
Query: 229 LLNGVCRKVSLHPEERFERTIRDADKVFD-EMRERGIEPDVTSFSIVLHVYSRAHKPQ-- 285
LLN + R++ L+PE E +F+ +++ PD ++ ++H+ SRA Q
Sbjct: 72 LLNSILRRLRLNPEACLE--------IFNLASKQQKFRPDYKAYCKMVHILSRARNYQQT 123
Query: 286 ---------LSLDKF-------RMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
L+ F R+ KE PTV + ++K A G +++A +FD M
Sbjct: 124 KSYLCELVALNHSGFVVWGELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNM 181
Query: 330 -------------------VRSG----------------VSPCAVTYNCFFKEYRGRKDA 354
VR G VSP T + Y +
Sbjct: 182 GNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNV 241
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
D A+ K+ + TY L+ + + + + R M E GV ++ YT
Sbjct: 242 DKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTS 301
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
LI G C++ EA F + EK + + + L G ++ +R R+ + E
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 475 ISFGSEFQNYQLKPY 489
+ + N + Y
Sbjct: 362 VRTNTTICNSLINGY 376
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
D M+ VLI + K G V+ + +M + G+E + +YN L + R+ +R+
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRY- 242
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
F++M G+EP +++++L + + + + +L F MK +GI P AT+
Sbjct: 243 ---------FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATF 293
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
++I ++++AE LF EM + + P V+Y K Y D L++F++M+
Sbjct: 294 NTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS 353
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
G+ P A TY LL A + K I ++M + P
Sbjct: 354 SGI-EPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
+M E+G+ D F +++ Y +A Q S+ F+ MK+ G+ T+ +Y S+ K + G
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNC----FFKEYRGRKDADSALKLFKKMKEDGLCSPT 373
R A+ F++MV GV P TYN FF R ++AL+ F+ MK G+ SP
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLR----LETALRFFEDMKTRGI-SPD 289
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
T+ ++ F + + ++++ +MK + +GP + YT +I G + + + F
Sbjct: 290 DATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFE 349
Query: 434 EMIEKGFLPQKVTFETLYRGL 454
EM G P T+ TL GL
Sbjct: 350 EMRSSGIEPNATTYSTLLPGL 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
M E+G+ + +I+ G ++++ +F +M GV +YN FK R
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 354 ADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYT 413
A + F KM +G+ PT HTY ++L F + + + DMK G+ PD +
Sbjct: 236 YMMAKRYFNKMVSEGV-EPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 414 LLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD 458
+I+G C KK EA + FVEM P V++ T+ +G + D
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 170/425 (40%), Gaps = 69/425 (16%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
+A FN S P H+ ++L++ + + A + +M R ++P+ +TF
Sbjct: 238 MAKRYFNKMVSEGVEPTRHT-YNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATF--- 293
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVF---NGNKRHCRFNPDVKMYTVLIYG 197
+++ C++ + A ++F GNK P V YT +I G
Sbjct: 294 ---------------NTMINGFCRFKKMDEAEKLFVEMKGNK----IGPSVVSYTTMIKG 334
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI-------R 250
+ + RV+ EM GIEPN TY+ LL G+C + + + + +
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPK 394
Query: 251 D-------------------ADKVFDEMRERGIEPDVTSFSIVLH------VYSRAHKPQ 285
D A +V M + + + +++ Y+RA K
Sbjct: 395 DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 454
Query: 286 LSL-DKFRMMKEQGICPTV-ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
+L +K +++ Q + Y +I+ L + G+ AE LF ++++ GV N
Sbjct: 455 DTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA-LNN 513
Query: 344 FFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
+ + + DS+ ++ K M G+ + + Y +L++ ++ G K M E
Sbjct: 514 LIRGHAKEGNPDSSYEILKIMSRRGVPRES-NAYELLIKSYMSKGEPGDAKTALDSMVED 572
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF-------LPQKVTFETLYRGLIQ 456
G PD L+ +I L E + + A + + MI+K L K+ L RG ++
Sbjct: 573 GHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVE 632
Query: 457 SDMLR 461
+ R
Sbjct: 633 EALGR 637
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 145/362 (40%), Gaps = 35/362 (9%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
+A +F+YA PN S SS +LI + + R F+L +D VL
Sbjct: 66 LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNL-------IDD-----------VL 107
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN--PDVK-MYTVLIYG 197
+ S T E FT L+ Y KL +V + + FN P K + +L
Sbjct: 108 AKHRSSGYPLTGEIFTYLIKV---YAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL 164
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
G ++ A G+ PN +YN+L+ C + A ++F
Sbjct: 165 VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC----------LNDDLSIAYQLFG 214
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
+M ER + PDV S+ I++ + R + +++ M +G P +YT+++ L
Sbjct: 215 KMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+L +A L M G +P V YN + A A K+ M +G CSP + +Y
Sbjct: 275 QLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG-CSPNSVSY 333
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
L+ M K+ +M G P + L+ G C K EAC +++
Sbjct: 334 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Query: 438 KG 439
G
Sbjct: 394 NG 395
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 141/343 (41%), Gaps = 41/343 (11%)
Query: 115 FDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKY---GYVKLA 171
FD A Q Q + + S+ L+LI +L +F ++ D L K+ GY L
Sbjct: 71 FDYASQ------QPNFRHSRSSHLILILKL-----GRGRYFNLIDDVLAKHRSSGY-PLT 118
Query: 172 AEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLN 231
E+F Y + +Y KL E S +M+E P N +L+
Sbjct: 119 GEIFT--------------YLIKVYAEAKLP--EKVLSTFYKMLEFNFTPQPKHLNRILD 162
Query: 232 GVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF 291
+ ++ A ++F R G+ P+ S+++++ + ++ F
Sbjct: 163 VLVSHRGY---------LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLF 213
Query: 292 RMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGR 351
M E+ + P V +Y +I+ G++ A L D+M+ G P ++Y +
Sbjct: 214 GKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK 273
Query: 352 KDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDL 411
A KL +MK G C+P Y ++ F + D +++ DM +G P+
Sbjct: 274 TQLREAYKLLCRMKLKG-CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 412 YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
Y LI GLC++ + E ++ EMI KGF P L +G
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 91/215 (42%), Gaps = 2/215 (0%)
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
D V + R G F+ ++ VY+ A P+ L F M E P ++
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDV 163
Query: 313 LASC-GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
L S G L+ A LF GV P +YN + + D A +LF KM E +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV- 222
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P +Y +L+Q F + + E+ DM G PD YT L++ LC + + REA +
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 432 FVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL 466
M KG P V + T+ G + D R++
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKV 317
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 139/325 (42%), Gaps = 27/325 (8%)
Query: 76 KHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPS 135
K H+ + + L + K N + +F ++ +T+ KV + + A + +D+ S +
Sbjct: 117 KDHTAMQILLSDLRKE--NRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGF 174
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
T T ++ LC G+VK A V + +K N ++ +Y L+
Sbjct: 175 TV------------------TAIISALCSRGHVKRALGVMHHHKDVISGN-ELSVYRSLL 215
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVC-RKVSLHPEERFERTIRDADK 254
+GW V+ A+ + +M GI P++ +N LL +C R V+ +P + +A
Sbjct: 216 FGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSG----LVPEALN 271
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
+ EMR I+P S++I+L R + + S MK G P +Y V++ L
Sbjct: 272 IMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLY 331
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
GR + DEM+ G P Y G + + AL+LF+KMK +
Sbjct: 332 LTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSV-GGYG 390
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRD 399
Y +L+ K +E+W +
Sbjct: 391 QVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 294 MKEQGICPTVATYTSVIKCLAS-------CGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
MK GI P + + S++ CL G + +A + EM + P +++YN
Sbjct: 234 MKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLS 293
Query: 347 EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVG 406
+ + ++ ++MK G C P +Y ++++ G +I +M E G
Sbjct: 294 CLGRTRRVRESCQILEQMKRSG-CDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFR 352
Query: 407 PDLDLYTLLIHGLCERKKWREACQFFVEM 435
P+ Y LI LC ++ A Q F +M
Sbjct: 353 PERKFYYDLIGVLCGVERVNFALQLFEKM 381
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 31/254 (12%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDT--KTTSEH 154
L S+F +LID + ++ + D A +L+ M Q S+ +P L RL+S S
Sbjct: 177 LEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPR----LYSRLLSSVCKHKDSSC 232
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
F V+ GY++ + R RF+P ++ YTV++ + GR + S LN+M
Sbjct: 233 FDVI-------GYLE--------DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQM 277
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+EP++V Y ++L GV +E + + ADK+FDE+ G+ PDV ++++
Sbjct: 278 KCDRVEPDLVCYTIVLQGVI------ADEDYPK----ADKLFDELLLLGLAPDVYTYNVY 327
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
++ + + + +L M + G P V TY +IK L G L A+ L+ EM +GV
Sbjct: 328 INGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Query: 335 SPCAVTYNCFFKEY 348
+ + T++ Y
Sbjct: 388 NRNSHTFDIMISAY 401
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 120/274 (43%), Gaps = 28/274 (10%)
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
+ +LI C++G V+ A + M + + + Y+ LL+ VC+ H + +
Sbjct: 182 FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK----HKDS----SCF 233
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
D +++R+ P + +++V+ + + + MK + P + YT V+
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
+ + + A+ LFDE++ G++P TYN + + D + ALK+ M + G
Sbjct: 294 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG-S 352
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLI------------HG 418
P TY +L++ +KA + K +W++M+ +GV + + ++I HG
Sbjct: 353 EPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHG 412
Query: 419 LCERK-------KWREACQFFVEMIEKGFLPQKV 445
L E K + + EKG + Q V
Sbjct: 413 LLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAV 446
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/410 (18%), Positives = 166/410 (40%), Gaps = 33/410 (8%)
Query: 100 SSFHLLIDTMAKVRQ-----FDLAW-----QLITEMDQRSLTPNPSTFLVLIRRLVS--- 146
SS+H + + M K R+ F W Q + RS S ++R L+S
Sbjct: 5 SSWHRMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQ 64
Query: 147 --DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
+ + T + + ++ TL K ++ + V + +F+ ++ +I + GR+
Sbjct: 65 LHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRI 124
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
E A ++ P+ T N LL + RK +++ ++ + G+
Sbjct: 125 EEAIEVFFKIPNFRCVPSAYTLNALLLVLVRK---------RQSLELVPEILVKACRMGV 175
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL-----ASCGRL 319
+ ++F I++ R + + + R M + + Y+ ++ + +SC
Sbjct: 176 RLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF-- 233
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
D G +++ ++ SP Y + + + +MK D + P Y +
Sbjct: 234 -DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRV-EPDLVCYTI 291
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
+LQ + + +++ ++ G+ PD+ Y + I+GLC++ A + M + G
Sbjct: 292 VLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 440 FLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
P VT+ L + L+++ L + L K+++ ++ S + + Y
Sbjct: 352 SEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 167/405 (41%), Gaps = 36/405 (8%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
ALSLF+ + + + S+ LI +AK R FD Q++ + R++ S F+ LI
Sbjct: 65 ALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN--PDVKMYTVLIYGWC 199
+H+ K G V A +VF+ + F+ ++ LI
Sbjct: 124 -----------QHYG-------KAGSVDKAIDVFH---KITSFDCVRTIQSLNTLINVLV 162
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
G +E A+SF + + + PN V++N+L+ G K A KVFDEM
Sbjct: 163 DNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA----------ACKVFDEM 212
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
E ++P V +++ ++ R + M ++ I P T+ ++K L G
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
+A+ L +M G P V Y + R D A L +MK+ + P Y +
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI-KPDVVIYNI 331
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
L+ + + +M+ G P+ Y ++I G C + + M+
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Query: 440 FLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGS-EFQN 483
P TF + GLI+ L + + + ++++SFGS +QN
Sbjct: 392 HCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQN 436
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 127/284 (44%), Gaps = 22/284 (7%)
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
E A S ++ E G + +Y+ L+ + + R D++ +R R +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAK----------SRNFDAVDQILRLVRYRNV 112
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
+ F ++ Y +A ++D F + T+ + ++I L G LE A+
Sbjct: 113 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 172
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
FD + P +V++N K + + D ++A K+F +M E + P+ TY L+
Sbjct: 173 FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEV-QPSVVTYNSLIGFL 231
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
+ D +G K + DM + + P+ + LL+ GLC + ++ EA + +M +G P
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 445 VTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKP 488
V + G++ SD+ + R +DE + G E + ++KP
Sbjct: 292 VNY-----GILMSDLGKRGR-----IDEAKLLLG-EMKKRRIKP 324
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 22/315 (6%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSD--TKTTSEHFTVLL 159
F +++ ++K + L + +D+ P ++ +D K E T+++
Sbjct: 159 FKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVV 218
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
LC+ G+ +A ++ PD + +LI GWC +++ A EM G
Sbjct: 219 KKLCEKGHASIAEKMVKNTANE--IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGF 276
Query: 220 EPNVVTYNVLLNGVCR------KVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
E YN++L+ VC+ L PE +KV EM RG+ + +F++
Sbjct: 277 EIGTKAYNMMLDCVCKLCRKKDPFKLQPE---------VEKVLLEMEFRGVPRNTETFNV 327
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
+++ + + + ++ F M E G P TY +I+ L R+ + + + D+M +G
Sbjct: 328 LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG 387
Query: 334 VSPC--AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG 391
Y F K G + + A+ +FK MK +G C P TY +L+ + +
Sbjct: 388 YGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANG-CKPGIKTYDLLMGKMCANNQLT 446
Query: 392 VVKEIWRDMKESGVG 406
++++ + G+
Sbjct: 447 RANGLYKEAAKKGIA 461
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 44/332 (13%)
Query: 159 LDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG 218
+D L + G K + F + D + T+++ C+ G A+ +
Sbjct: 182 IDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE- 240
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
I P+ ++L++G C + +A ++ EM G E +++++L
Sbjct: 241 IFPDENICDLLISGWC----------IAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCV 290
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+ + + D F++ E E + EM GV
Sbjct: 291 CKLCRKK---DPFKLQPE-------------------------VEKVLLEMEFRGVPRNT 322
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
T+N + + A+ LF +M E G C P A TY VL++ +A IG E+
Sbjct: 323 ETFNVLINNLCKIRRTEEAMTLFGRMGEWG-CQPDAETYLVLIRSLYQAARIGEGDEMID 381
Query: 399 DMKESGVGPDLDL--YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
MK +G G L+ Y + LC ++ A F M G P T++ L +
Sbjct: 382 KMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCA 441
Query: 457 SDMLRTWRRLKKKLDEESISFGSEFQNYQLKP 488
++ L L K+ ++ I+ + Y++ P
Sbjct: 442 NNQLTRANGLYKEAAKKGIAVSP--KEYRVDP 471
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 31/403 (7%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A++ F + K + ++ LL+ + ++F LA Q + E+ + LT V
Sbjct: 96 AITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIE--LTSKKEEVDVF- 152
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAA---------EVFNGNKRHCRFNPDVKMYT 192
R LVS T + V+ D L K GY+KL EV + F+ V
Sbjct: 153 RVLVSATDECNWD-PVVFDMLVK-GYLKLGLVEEGFRVFREVLDSG-----FSVSVVTCN 205
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDA 252
L+ G KL +E + M GI PN T+N+L N C + R+
Sbjct: 206 HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCN----------DSNFREV 255
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
D ++M E G EPD+ +++ ++ Y R + + + +++M + + P + TYTS+IK
Sbjct: 256 DDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
L GR+ +A F MV G+ P ++YN Y + KL +M + + P
Sbjct: 316 LCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV-P 374
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
T V+++ F++ + +++ V ++ LI LC+ K A
Sbjct: 375 DRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLL 434
Query: 433 VEMI-EKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 474
+I E+G + T+ L L + D + LK KL ++
Sbjct: 435 DRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQN 477
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 129/336 (38%), Gaps = 29/336 (8%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNG 177
WQ+ + M + + PN TF +L +D+ +F + D L K+ E
Sbjct: 220 CWQVYSVMCRVGIHPNTYTFNILTNVFCNDS-----NFREVDDFL-----EKMEEE---- 265
Query: 178 NKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKV 237
F PD+ Y L+ +C+ GR++ A M R + P++VTY L+ G+C+
Sbjct: 266 -----GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCK-- 318
Query: 238 SLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ 297
+ +R+A + F M +RGI+PD S++ +++ Y + Q S M
Sbjct: 319 --------DGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGN 370
Query: 298 GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSA 357
+ P T +++ GRL A E+ R V + +A
Sbjct: 371 SVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAA 430
Query: 358 LKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH 417
L ++ E+ TY L++ + D I + +K D Y LI
Sbjct: 431 KHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIG 490
Query: 418 GLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
LC + REA EM + P L G
Sbjct: 491 CLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYG 526
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 116/308 (37%), Gaps = 52/308 (16%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------------- 141
+F++L + F + +M++ P+ T+ L+
Sbjct: 238 TFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIM 297
Query: 142 --RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC 199
RR+V D T +T L+ LCK G V+ A + F+ PD Y LIY +C
Sbjct: 298 YRRRVVPDLVT----YTSLIKGLCKDGRVREAHQTFHRMVDR-GIKPDCMSYNTLIYAYC 352
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR--------- 250
K G ++ ++ L+EM+ + P+ T V++ G R+ L F +R
Sbjct: 353 KEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFE 412
Query: 251 ----------------DADKVFDEM-RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM 293
A + D + E G E +++ ++ SR + +L
Sbjct: 413 VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGK 472
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
+K Q TY ++I CL GR +AE L EM S V P + Y D
Sbjct: 473 LKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELD 532
Query: 354 ADSALKLF 361
D A +L
Sbjct: 533 FDKAERLL 540
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 149/365 (40%), Gaps = 78/365 (21%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
++ ++ ++I + ++A + EM L P+ STF LI L E T
Sbjct: 711 ITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEAT 770
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
+ + G+V PD ++ + C++G + A+S L+ + +
Sbjct: 771 RTFREMIRSGFV-----------------PDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR----ERGIEPDVTSFS 272
G P V Y++ + +CR I ++ E+ ER + T S
Sbjct: 814 IGF-PVTVAYSIYIRALCR-------------IGKLEEALSELASFEGERSLLDQYTYGS 859
Query: 273 IVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
IV + R Q +LDK MKE G P V YTS+I
Sbjct: 860 IVHGLLQRGD-LQKALDKVNSMKEIGTKPGVHVYTSLI---------------------- 896
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGV 392
Y FFKE K + L+ +KM+ + C P+ TY ++ ++ +G
Sbjct: 897 -------VY--FFKE----KQLEKVLETCQKMEGES-CEPSVVTYTAMICGYMS---LGK 939
Query: 393 VKEIW---RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
V+E W R+M+E G PD Y+ I+ LC+ K +A + EM++KG P + F T
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 450 LYRGL 454
++ GL
Sbjct: 1000 VFYGL 1004
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 148/323 (45%), Gaps = 31/323 (9%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
L ++++++I ++ + DLA + EM ++ +T T+
Sbjct: 257 LDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTY------------------K 298
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
+LLD + K V + + + R C + + L+ +C G+++ A + E+
Sbjct: 299 MLLDCIAKSEKVDVVQSIADDMVRICEISEH-DAFGYLLKSFCVSGKIKEALELIRELKN 357
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
+ + + + +L+ G+CR + DA ++ D M+ R ++ D + I++
Sbjct: 358 KEMCLDAKYFEILVKGLCRA----------NRMVDALEIVDIMKRRKLD-DSNVYGIIIS 406
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
Y R + +L++F ++K+ G P V+TYT +++ L + E LF+EM+ +G+ P
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
+V + G+ A K+F M+E G+ PT +Y + ++ ++ + +I
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI-KPTWKSYSIFVKELCRSSRYDEIIKI 525
Query: 397 WRDMKESGVGPDLDLYTLLIHGL 419
+ M S + D+++ +I +
Sbjct: 526 FNQMHASKIVIRDDIFSWVISSM 548
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 149/333 (44%), Gaps = 52/333 (15%)
Query: 170 LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVL 229
LA FN K+ F+ V +Y ++ + ++ ++EM + G + ++ T+ +L
Sbjct: 171 LAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTIL 230
Query: 230 LNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
+S++ + + I VF++MR+ G E D T+++I++ A + L+L+
Sbjct: 231 -------ISVYGKAK---KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALE 280
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT----YNCFF 345
++ M E+GI + TY ++ C+A +++ + + D+MVR C ++ +
Sbjct: 281 FYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR----ICEISEHDAFGYLL 336
Query: 346 KEYRGRKDADSALKLFKKMKED--------------GLCSPT------------------ 373
K + AL+L +++K GLC
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 396
Query: 374 -AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
++ YG+++ +L+ + + E + +K+SG P + YT ++ L + K++ + C F
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 433 VEMIEKGFLPQKVTFETLYRG-LIQSDMLRTWR 464
EMIE G P V + G L Q+ + W+
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWK 489
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 152/377 (40%), Gaps = 31/377 (8%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
+A+ FN+ K ++ ++ + R D+ +L++EM++ + T+
Sbjct: 171 LAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTW--- 227
Query: 141 IRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCK 200
T+L+ K + VF R F D Y ++I C
Sbjct: 228 ---------------TILISVYGKAKKIGKGLLVFE-KMRKSGFELDATAYNIMIRSLCI 271
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
GR + A F EM+E+GI + TY +LL+ + + + + D+M
Sbjct: 272 AGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKS----------EKVDVVQSIADDMV 321
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+ +F +L + + K + +L+ R +K + +C + ++K L R+
Sbjct: 322 RICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMV 381
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
DA + D M R + V Y Y + D AL+ F+ +K+ G P TY +
Sbjct: 382 DALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGR-PPRVSTYTEI 439
Query: 381 LQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+Q K ++ +M E+G+ PD T ++ G + + EA + F M EKG
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Query: 441 LPQKVTFETLYRGLIQS 457
P ++ + L +S
Sbjct: 500 KPTWKSYSIFVKELCRS 516
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 100/255 (39%), Gaps = 28/255 (10%)
Query: 99 HSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTT------- 151
H +F L+ + + A +LI E+ + + + F +L++ L +
Sbjct: 329 HDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD 388
Query: 152 ---------SEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
S + +++ + V A E F K+ R P V YT ++ KL
Sbjct: 389 IMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR-PPRVSTYTEIMQHLFKLK 447
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+ E + NEM+E GIEP+ V ++ G + + +A KVF M E+
Sbjct: 448 QFEKGCNLFNEMIENGIEPDSVAITAVVAG----------HLGQNRVAEAWKVFSSMEEK 497
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI+P S+SI + R+ + + F M I ++ VI + G E
Sbjct: 498 GIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKI 557
Query: 323 EGLFDEMVRSGVSPC 337
L E+ + S C
Sbjct: 558 H-LIKEIQKRSNSYC 571
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 169/396 (42%), Gaps = 59/396 (14%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTF-----------------LVLIR 142
SS++ ++ + K+ D A L+ EM+ L P+ T+ VL R
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 143 RLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLG 202
++ K ++ + LL + + G++KL + +G + DV + T LI + K G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI-HGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 203 RVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
+ A+ + M + N+V +N L++G+ + ++DA+ + M +
Sbjct: 275 YLPYARMVFDMMDAK----NIVAWNSLVSGL----------SYACLLKDAEALMIRMEKE 320
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
GI+PD +++ + Y+ KP+ +LD MKE+G+ P V ++T++ + G +A
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE-DGLC-----SPTAHT 376
+F +M GV P A T + K L L KE G C A+
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKIL-------GCLSLLHSGKEVHGFCLRKNLICDAYV 433
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
L+ M+ K+ + EI+ +K + + ++ G + E F M+
Sbjct: 434 ATALVDMYGKSGDLQSAIEIFWGIKNKSLAS----WNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 437 EKGFLPQKVTFETLY-----RGLIQS-----DMLRT 462
E G P +TF ++ GL+Q D++R+
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 30/292 (10%)
Query: 166 GYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVT 225
G ++L+ +VFN K + ++ + ++ + KLG V+ A L+EM G++P++VT
Sbjct: 138 GKLELSRKVFNSMK-----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 226 YNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQ 285
+N LL+G K +DA V M+ G++P +S S +L + +
Sbjct: 193 WNSLLSGYASK----------GLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 286 LSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP-----CAVT 340
L + + V T++I G L A +FD M + ++
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
Y C K DA++ L +M+++G+ P A T+ L + ++ M
Sbjct: 303 YACLLK------DAEA---LMIRMEKEGI-KPDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
KE GV P++ +T + G + +R A + F++M E+G P T TL +
Sbjct: 353 KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 155/374 (41%), Gaps = 27/374 (7%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLC- 163
L D M K + DLAW I ++ RS N + L R + + V L +C
Sbjct: 45 LFDEMPK--RDDLAWNEIVMVNLRS--GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 164 -KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPN 222
K G+ + +G +V M LI + + G++E ++ N M +R N
Sbjct: 101 NKEGFAE--GRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----N 154
Query: 223 VVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAH 282
+ ++N +L+ + + DA + DEM G++PD+ +++ +L Y+
Sbjct: 155 LSSWNSILSSYTKL----------GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 283 KPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYN 342
+ ++ + M+ G+ P+ ++ +S+++ +A G L+ + + ++R+ +
Sbjct: 205 LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET 264
Query: 343 CFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
Y A +F M + + + G+ LK +++ M++
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIR-----MEK 319
Query: 403 SGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRT 462
G+ PD + L G K +A +M EKG P V++ ++ G ++ R
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 463 WRRLKKKLDEESIS 476
++ K+ EE +
Sbjct: 380 ALKVFIKMQEEGVG 393
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 126/304 (41%), Gaps = 12/304 (3%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
F++++ K G ++ A V PDV ++ ++ + K + Q +
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRI 655
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+ GI N YN ++N R + L + F+EM G P+ +F+++
Sbjct: 656 RKSGIHWNQEMYNCVINCCARALPLD----------ELSGTFEEMIRYGFTPNTVTFNVL 705
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
L VY +A + + F + K G+ + +Y ++I + M G
Sbjct: 706 LDVYGKAKLFKKVNELFLLAKRHGVVDVI-SYNTIIAAYGKNKDYTNMSSAIKNMQFDGF 764
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK 394
S YN Y K + + K+MK+ P +TY +++ ++ + I V
Sbjct: 765 SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKS-TSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 395 EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
++ +++KESG+GPDL Y LI EA EM + +P KVT+ L L
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Query: 455 IQSD 458
++D
Sbjct: 884 RRND 887
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 113/233 (48%), Gaps = 13/233 (5%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
F +++ +IY K G V+ A + + M+E G+ PNV T +L+ G+ +K
Sbjct: 206 FQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM-GLYQK------- 257
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
+ +A+ F MR+ GI + +++S ++ +Y+R + + +MK+ + +
Sbjct: 258 --NWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKL 314
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
+ ++ + G++E AE + M +G SP + YN Y ++A LF +
Sbjct: 315 ENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHR 374
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD-LDLYTLL 415
+ GL P +Y +++ + +AD K ++++K G P+ +L+TL+
Sbjct: 375 LCNIGL-EPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 106/268 (39%), Gaps = 30/268 (11%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ +I+ A+ D EM + TPN TF VLLD
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTF------------------NVLLDV 708
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
K K E+F KRH DV Y +I + K S + M G
Sbjct: 709 YGKAKLFKKVNELFLLAKRHGVV--DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSV 766
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
++ YN LL+ + + E+F ++ M++ PD +++I++++Y
Sbjct: 767 SLEAYNTLLDAYGKDKQM---EKFRSILK-------RMKKSTSGPDHYTYNIMINIYGEQ 816
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
D + +KE G+ P + +Y ++IK G +E+A GL EM + P VTY
Sbjct: 817 GWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGL 369
R + A+K MK+ G+
Sbjct: 877 TNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 97/256 (37%), Gaps = 37/256 (14%)
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
++ DE ++ I PDV F +L +Y + + +++ GI Y VI C
Sbjct: 617 EIMDEQKD--IVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCC 674
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVT--------------------------------- 340
A L++ G F+EM+R G +P VT
Sbjct: 675 ARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVI 734
Query: 341 -YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
YN Y KD + K M+ DG S + Y LL + K + + I +
Sbjct: 735 SYNTIIAAYGKNKDYTNMSSAIKNMQFDGF-SVSLEAYNTLLDAYGKDKQMEKFRSILKR 793
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
MK+S GPD Y ++I+ E+ E E+ E G P ++ TL + M
Sbjct: 794 MKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGM 853
Query: 460 LRTWRRLKKKLDEESI 475
+ L K++ +I
Sbjct: 854 VEEAVGLVKEMRGRNI 869
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/411 (17%), Positives = 158/411 (38%), Gaps = 49/411 (11%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
S++ +I ++R +D A ++I M Q + + E++ V+L
Sbjct: 280 SAYSSMITIYTRLRLYDKAEEVIDLMKQDRV------------------RLKLENWLVML 321
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
+ + G ++LA + + F+P++ Y LI G+ K+ ++E AQ + + G+
Sbjct: 322 NAYSQQGKMELAESILV-SMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGL 380
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIR-------------------------DADK 254
EP+ +Y ++ G R + + + + ++ A K
Sbjct: 381 EPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIK 440
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
++M G + + I+L Y + K + + I +++S++
Sbjct: 441 TIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYV 499
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK-KMKEDGLCSPT 373
G ++D GL E + + Y+ + A+K++ KM+ D
Sbjct: 500 KHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDE--EIN 557
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
H ++ ++ ++++ ++K SGV D +++++ + EAC
Sbjct: 558 LHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617
Query: 434 EMIE-KGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQN 483
M E K +P F + R + D+ + L ++ + I + E N
Sbjct: 618 IMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYN 668
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 18/332 (5%)
Query: 149 KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQ 208
K T + +T L+ K + A K PDV +TVLI CKLGR + +
Sbjct: 176 KPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVK 235
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE-PD 267
S + EM G+ + VTYN +++G + FE + + V +M E G PD
Sbjct: 236 SIVLEMSYLGVGCSTVTYNTIIDGYGK------AGMFE----EMESVLADMIEDGDSLPD 285
Query: 268 VTSFSIVLHVYSRAH---KPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
V + + ++ Y K + +F++M G+ P + T+ +I G +
Sbjct: 286 VCTLNSIIGSYGNGRNMRKMESWYSRFQLM---GVQPDITTFNILILSFGKAGMYKKMCS 342
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
+ D M + S VTYN + + + +F+KMK G+ P + TY L+ +
Sbjct: 343 VMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV-KPNSITYCSLVNAY 401
Query: 385 LKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQK 444
KA ++ + + R + S V D + +I+ + + +++M E+ P K
Sbjct: 402 SKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDK 461
Query: 445 VTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
+TF T+ + + + L+K++ I
Sbjct: 462 ITFATMIKTYTAHGIFDAVQELEKQMISSDIG 493
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 6/218 (2%)
Query: 239 LHPEERFERTIRDADKVFDEMRERGIEPDVTSF-SIVLHVYSRAHKP---QLSLDKFRMM 294
+ P++ R +R V R+ E +T + VL A K Q +L F ++
Sbjct: 75 VDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLL 134
Query: 295 KEQ-GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
++Q P TYT + K L +C + + A LF+ M+ G+ P Y Y +
Sbjct: 135 RKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSEL 194
Query: 354 ADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYT 413
D A + MK C P T+ VL+ K +VK I +M GVG Y
Sbjct: 195 LDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYN 254
Query: 414 LLIHGLCERKKWREACQFFVEMIEKG-FLPQKVTFETL 450
+I G + + E +MIE G LP T ++
Sbjct: 255 TIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSI 292
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 132/338 (39%), Gaps = 23/338 (6%)
Query: 159 LDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL--IYGWCKLGRVETAQSFLNEMVE 216
LD K + A ++FN ++ + P K YT L + G CK + + A M+
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCK--QPDQASLLFEVMLS 172
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE----RGIEPDVTSFS 272
G++P + Y L +S++ + DK F + +PDV +F+
Sbjct: 173 EGLKPTIDVYTSL-------ISVYGKSEL------LDKAFSTLEYMKSVSDCKPDVFTFT 219
Query: 273 IVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
+++ + + L M G+ + TY ++I G E+ E + +M+
Sbjct: 220 VLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIED 279
Query: 333 GVS-PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG 391
G S P T N Y ++ + + + G+ P T+ +L+ F KA M
Sbjct: 280 GDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGV-QPDITTFNILILSFGKAGMYK 338
Query: 392 VVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLY 451
+ + M++ Y ++I + + + F +M +G P +T+ +L
Sbjct: 339 KMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLV 398
Query: 452 RGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
++ ++ + +++ + + F N + Y
Sbjct: 399 NAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAY 436
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 157/373 (42%), Gaps = 32/373 (8%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE-------- 153
++ ++D + K FDLA + + + L +TF++L++ L +
Sbjct: 231 YNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 154 ---------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
+T ++ TL G + + V++ +R PDV Y L+ G CK GRV
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD-EIKPDVMAYGTLVVGLCKDGRV 349
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
E EM + I + Y VL+ G + +R A +++++ + G
Sbjct: 350 ERGYELFMEMKGKQILIDREIYRVLIEGFVA----------DGKVRSACNLWEDLVDSGY 399
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
D+ ++ V+ ++ + F++ E+ + P T + ++ RL D
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSN 459
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS-ALKLFKKMKEDGLCSPTAHTYGVLLQM 383
+ + + G P + FFK ++ ++ AL +F +K G S + Y +L++
Sbjct: 460 VLERIGELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS--VYNILMEA 516
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
K I ++ +M++ G PD Y++ I E+ + AC F ++IE +P
Sbjct: 517 LYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPS 576
Query: 444 KVTFETLYRGLIQ 456
+ +L +GL Q
Sbjct: 577 IAAYLSLTKGLCQ 589
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 133/305 (43%), Gaps = 12/305 (3%)
Query: 170 LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVL 229
+AA+ F+ + + D Y Y + G A M +G P+ + +L
Sbjct: 140 VAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEIL 199
Query: 230 LNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLD 289
+ +H + R R +R V+++M++ G +P V ++ ++ + L+L
Sbjct: 200 -------IRMHADNR--RGLR-VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALA 249
Query: 290 KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYR 349
+ KE G+ T+ ++K L GR+E+ + M + P Y K
Sbjct: 250 VYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLV 309
Query: 350 GRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDL 409
+ D++L+++ +M+ D + P YG L+ K + E++ +MK + D
Sbjct: 310 SEGNLDASLRVWDEMRRDEI-KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDR 368
Query: 410 DLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML-RTWRRLKK 468
++Y +LI G K R AC + ++++ G++ + + +GL + + + ++ +
Sbjct: 369 EIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQV 428
Query: 469 KLDEE 473
++EE
Sbjct: 429 AIEEE 433
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 14/265 (5%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P K + +LI R +M + G +P V YN +++ + + F
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKN------GYF 244
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
+ + V+++ +E G+ + T+F I++ +A + + L+ + M+E P V
Sbjct: 245 DLAL----AVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFA 300
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
YT++IK L S G L+ + ++DEM R + P + Y + +LF +MK
Sbjct: 301 YTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMK 360
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
+ Y VL++ F+ + +W D+ +SG D+ +Y +I GLC +
Sbjct: 361 GKQILIDR-EIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQV 419
Query: 426 REACQFFVEMIEKGFLPQKVTFETL 450
+A + F IE+ P FETL
Sbjct: 420 DKAYKLFQVAIEEELEPD---FETL 441
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 161/388 (41%), Gaps = 36/388 (9%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
++ L+ + K + + ++L EM + + + + VLI V+D K S L +
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSA--CNLWE 392
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
L GY+ D+ +Y +I G C + +V+ A +E +E
Sbjct: 393 DLVDSGYI-----------------ADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELE 435
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG--IEPDVTSFSIVLHVY 278
P+ T + ++ V+ R + D V + + E G + +T F +L
Sbjct: 436 PDFETLSPIM------VAYVVMNR----LSDFSNVLERIGELGYPVSDYLTQFFKLL--C 483
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+ K ++LD F ++K +G +V+ Y +++ L G ++ + LF EM + G P +
Sbjct: 484 ADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDS 542
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
+Y+ + + D +A +K+ E C P+ Y L + + I V + R
Sbjct: 543 SSYSIAICCFVEKGDVKAACSFHEKIIEMS-CVPSIAAYLSLTKGLCQIGEIDAVMLLVR 601
Query: 399 D-MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+ + GP Y L + +C+ + + EM ++G +V + + G+ +
Sbjct: 602 ECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKH 661
Query: 458 DMLRTWRRLKKKLDEESISFGSEFQNYQ 485
++ R + +L + + ++ Y+
Sbjct: 662 GTIKVAREVFTELKKRKVMTEADMVVYE 689
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 77/190 (40%), Gaps = 6/190 (3%)
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
K++G A Y + CL G A+ L + M G P + + + +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
+++KMK+ G P Y ++ +K + ++ D KE G+ + + +
Sbjct: 210 LRVYYVYEKMKKFGF-KPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMI 268
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSD----MLRTWRRLKK-K 469
L+ GLC+ + E + M E P + + + L+ LR W +++ +
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Query: 470 LDEESISFGS 479
+ + +++G+
Sbjct: 329 IKPDVMAYGT 338
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 167/400 (41%), Gaps = 74/400 (18%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F+ +I+ ++ + A Q + +M + L P ST+ LI+ K E + LLD
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK--PERSSELLDL 175
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
+ + G V + P+++ + VL+ WCK +VE A + +M E G+ P
Sbjct: 176 MLEEGNVDVG--------------PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 222 NVVTYN-------------------------------------VLLNGVCRKVSLHPEER 244
+ VTYN +++ G CR+ + R
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 245 FERTIRD----ADKV--------FDEMRER-GIEPDVTSFSIVLHVYSR----AHKPQLS 287
F R +++ A+ V F E+ +R GI D + +++L ++ ++
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI--DEVTLTLLLMSFNEEVELVGNQKMK 339
Query: 288 LDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE 347
+ +MKE + V TY++V+ +S G +E A +F EMV++GV P A Y+ K
Sbjct: 340 VQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
Y K+ A +L + + + P + ++ + + ++ M + GV P
Sbjct: 400 YVRAKEPKKAEELLETLIVES--RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSP 457
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
++ + L+ G E K+ +A + M G P+ TF
Sbjct: 458 NIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 22/274 (8%)
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT 248
K+ VLI + GR AQ+ + E G P++++Y LL + ++
Sbjct: 50 KLMNVLI----ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT----------VQKQ 95
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+ E+ + G + D F+ V++ +S + + ++ MKE G+ PT +TY +
Sbjct: 96 YGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNT 155
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSG---VSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
+IK G+ E + L D M+ G V P T+N + + +K + A ++ KKM+
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 366 EDGLCSPTAHTYGVLLQMFL-KADMIGVVKEIWRD--MKESGVGPDLDLYTLLIHGLCER 422
E G+ P TY + ++ K + + E+ MKE P+ +++ G C
Sbjct: 216 ECGV-RPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA-KPNGRTCGIVVGGYCRE 273
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
+ R+ +F M E V F +L G ++
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVE 307
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
RT+R K+ + + ERG R H+ Q F+ + E G P++ +Y
Sbjct: 43 RTVRSRTKLMNVLIERG----------------RPHEAQTV---FKTLAETGHRPSLISY 83
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
T+++ + + + E+ +SG ++ +N + + + A++ KMKE
Sbjct: 84 TTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKE 143
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG---VGPDLDLYTLLIHGLCERK 423
GL +PT TY L++ + A E+ M E G VGP++ + +L+ C++K
Sbjct: 144 LGL-NPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
K EA + +M E G P VT+ T+ +Q
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G V+ A + M E +P+V YN ++N +CR V + RF + D+M+
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCR-VGNFKKARF---------LLDQMQL 228
Query: 262 RGIE--PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
G PD +++I++ Y R T K + R+
Sbjct: 229 PGFRYPPDTYTYTILISSYCR----------------------YGMQTGCRKAIRR--RM 264
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
+A +F EM+ G P VTYNC AL+LF+ MK G C P TY
Sbjct: 265 WEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG-CVPNQVTYNS 323
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVG-PDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
++ + + I E+ R MK+ G G P YT LIH L E ++ EA VEM+E
Sbjct: 324 FIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEA 383
Query: 439 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 473
G +P++ T++ + L + T LDEE
Sbjct: 384 GLVPREYTYKLVCDALSSEGLAST-------LDEE 411
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKR-HCRFNPDVKMYTVLIYGWCK 200
RR T+ T L+ L + G+VK A F K HC+ PDV Y +I C+
Sbjct: 155 RRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCK--PDVYAYNTIINALCR 212
Query: 201 LGRVETAQSFLNEMVERGIE--PNVVTYNVLLNGVCR-KVSLHPEERFERTIRDADKVFD 257
+G + A+ L++M G P+ TY +L++ CR + + R + +A+++F
Sbjct: 213 VGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFR 272
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
EM RG PDV +++ ++ + ++ +L+ F MK +G P TY S I+ +
Sbjct: 273 EMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTN 332
Query: 318 RLEDAEGLFDEMVRSGVS-PCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
+E A + M + G P + TY + A A L +M E GL P +T
Sbjct: 333 EIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLV-PREYT 391
Query: 377 YGVLLQMFLKADMIGVV-KEIWRDMKES 403
Y ++ + + +E+ + M+E
Sbjct: 392 YKLVCDALSSEGLASTLDEELHKRMREG 419
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 23/186 (12%)
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
T A+ T ++KCL G +++A F M P YN + A L
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 362 KKMKEDGL-CSPTAHTYGVLLQMFLKADM-IGVVKEIWRDMKES----------GVGPDL 409
+M+ G P +TY +L+ + + M G K I R M E+ G PD+
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 410 DLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR---------GLIQSDML 460
Y LI G C+ + A + F +M KG +P +VT+ + R G I +M+
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAI--EMM 341
Query: 461 RTWRRL 466
RT ++L
Sbjct: 342 RTMKKL 347
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 38/266 (14%)
Query: 80 KIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLV 139
K AL+ F K P ++ ++ +I+ + +V F A L+ +M P T+
Sbjct: 182 KEALATFYRMKEYHCKPDVYA-YNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYT- 239
Query: 140 LIRRLVSDTKTTSEHFTVLLDTLCKYGYV-----KLAAEVFNGNKRHCR-----FNPDVK 189
+T+L+ + C+YG + ++ N+ F PDV
Sbjct: 240 ---------------YTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 190 MYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 249
Y LI G CK R+ A +M +G PN VTYN + R S+ E I
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI----RYYSVTNE------I 334
Query: 250 RDADKVFDEMRERGIE-PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
A ++ M++ G P ++++ ++H + + D M E G+ P TY
Sbjct: 335 EGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKL 394
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGV 334
V L+S G + + +R G+
Sbjct: 395 VCDALSSEGLASTLDEELHKRMREGI 420
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 180 RHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSL 239
R + D Y ++I+G CK G+ + A + ++ G++P+V TYN+++
Sbjct: 6 RESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI--------- 56
Query: 240 HPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
RF R A+K++ EM RG+ PD +++ ++H + +K + + + +
Sbjct: 57 ----RFSSLGR-AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNK---------LAQARKV 102
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
+ +T+ ++I R++D LF EM R G+ +TY +R D ++AL
Sbjct: 103 SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQM 383
+F++M +G+ S + +L Q+
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQL 186
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 146 SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVE 205
S+ + + +++ LCK G A +F N PDV+ Y ++I + LGR
Sbjct: 8 SNMDMDTAGYNIIIHGLCKAGKFDEAGNIFT-NLLISGLQPDVQTYNMMIR-FSSLGR-- 63
Query: 206 TAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE 265
A+ EM+ RG+ P+ +TYN +++G+C++ L + R +
Sbjct: 64 -AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLA-------------------QARKVS 103
Query: 266 PDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGL 325
++F+ +++ Y +A + + ++ F M +GI V TYT++I G A +
Sbjct: 104 KSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDI 163
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
F EMV +GV ++T+ + RK+ A+ +
Sbjct: 164 FQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
+F MRE ++ D ++I++H +A K + + F + G+ P V TY +I+ +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
S GR AE L+ EM+R G+ P +TYN + A K+ S +
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV----------SKSC 106
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
T+ L+ + KA + ++ +M G+ ++ YT LIHG + + A F E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 435 MIEKGFLPQKVTFETL 450
M+ G +TF +
Sbjct: 167 MVSNGVYSSSITFRDI 182
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 93 PNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI----------- 141
N + + ++++I + K +FD A + T + L P+ T+ ++I
Sbjct: 8 SNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKL 67
Query: 142 ------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
R LV DT T + ++ LCK + A +V + C + LI
Sbjct: 68 YAEMIRRGLVPDTIT----YNSMIHGLCKQNKLAQARKV----SKSC------STFNTLI 113
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
G+CK RV+ + EM RGI NV+TY L++G R+V A +
Sbjct: 114 NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF-RQVG---------DFNTALDI 163
Query: 256 FDEMRERGIEPDVTSFSIVL 275
F EM G+ +F +L
Sbjct: 164 FQEMVSNGVYSSSITFRDIL 183
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 124/272 (45%), Gaps = 29/272 (10%)
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV--CRKVSLH 240
R PDV +Y ++ + + E A L ++ +RG +P+ VTY +++ + C K +L
Sbjct: 588 RLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLV 647
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
E F +M++ I P+ ++ ++++ + K ++ M+ +GI
Sbjct: 648 HE------------FFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIV 694
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKL 360
+ A Y + +CL S GR + + ++ R P VTY + + +A +
Sbjct: 695 GSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYI 754
Query: 361 FKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESG------------VGPD 408
F +MK+ +CSP T ++L+ +L+ + +E+++ M E G V PD
Sbjct: 755 FDQMKK--VCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPD 812
Query: 409 LDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+ ++ E++KW + + EM+ G+
Sbjct: 813 TYTFNTMLDTCAEQEKWDDFGYAYREMLRHGY 844
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 155/360 (43%), Gaps = 35/360 (9%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
LS + + LI +K + DL W++ + + PN T ++I+ L + + +
Sbjct: 197 LSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRL--KEVV 254
Query: 157 VLLDTLCKYGYVKLAAEVFNGN------------------KRHCRFN--PDVKMYTVLIY 196
LLD +C G L + + N + KR N D Y++++Y
Sbjct: 255 DLLDRIC--GKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVY 312
Query: 197 GWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVF 256
K G + +A+ +EM++RG N Y V + C K +++A+++
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEK----------GDVKEAERLL 362
Query: 257 DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
EM E G+ P +F+ ++ ++R + L+ +M +G+ P+ + + ++K ++
Sbjct: 363 SEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKI 422
Query: 317 GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
+ A + + + G P TY+ + + D D ALKLF +M+ + SP
Sbjct: 423 ENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM-SPGFEV 481
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
+ L+ + ++ + MK+ + P+ D+Y LI + A + + EMI
Sbjct: 482 FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 175/407 (42%), Gaps = 24/407 (5%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNP--ST 136
+K ALS F+++ N S+ L I + K R A LI + SL +P S
Sbjct: 93 AKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALI----ESSLLNSPPDSD 148
Query: 137 FLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKR--HCRFNPDVKMYTVL 194
+ + + +T F +L+ K Y++L +VF KR C F V L
Sbjct: 149 LVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVF---KRLCDCGFTLSVITLNTL 205
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I+ K + +++ I PN +T +++ +C+ E R + + D+
Sbjct: 206 IHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCK------EGRLKEVVDLLDR 259
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAH-KPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
+ + R + + + S+V V + +SL K R++ + + T+ Y+ V+
Sbjct: 260 ICGK---RCLPSVIVNTSLVFRVLEEMRIEESMSLLK-RLLMKNMVVDTIG-YSIVVYAK 314
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPT 373
A G L A +FDEM++ G S + Y F + + D A +L +M+E G+ SP
Sbjct: 315 AKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGV-SPY 373
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
T+ L+ F + E M G+ P + ++ + + + A +
Sbjct: 374 DETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILT 433
Query: 434 EMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSE 480
+ I+KGF+P + T+ L RG I+ + + +L +++ +S G E
Sbjct: 434 KSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFE 480
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 33/300 (11%)
Query: 111 KVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVL------------ 158
K R+ D W+L EM + + LIR L D SE + +L
Sbjct: 192 KARKLDRFWELHKEMVESEF--DSERIRCLIRALC-DGGDVSEGYELLKQGLKQGLDPGQ 248
Query: 159 ------LDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLN 212
+ C+ G +EV + F P + +Y +I G C + A
Sbjct: 249 YVYAKLISGFCEIGNYACMSEVLHTMIAWNHF-PSMYIYQKIIKGLCMNKKQLEAYCIFK 307
Query: 213 EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFS 272
+ ++G P+ V Y ++ G C K L A K++ EM ++G+ P+ +++
Sbjct: 308 NLKDKGYAPDRVVYTTMIRGFCEKGWLG----------SARKLWFEMIKKGMRPNEFAYN 357
Query: 273 IVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
+++H + + + L + M G T+ + ++IK S G+ ++A +F M +
Sbjct: 358 VMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSET 417
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGV 392
GV+P A+TYN K + + LKL+K++K GL P+ Y L++ +D +
Sbjct: 418 GVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL-KPSGMAYAALVRNLKMSDSVAT 476
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 24/292 (8%)
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGV--CRKVS----LHPE--------ERFER 247
G VE A N + + GI +VVT N +L G RK+ LH E ER
Sbjct: 159 GLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRC 218
Query: 248 TIR------DADKVFDEMRE---RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG 298
IR D + ++ +++ +G++P ++ ++ + + M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
P++ Y +IK L + +A +F + G +P V Y + + + SA
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
KL+ +M + G+ P Y V++ K I +V+ + +M +G G + +I G
Sbjct: 339 KLWFEMIKKGM-RPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 419 LCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
C K EA + F M E G P +T+ L +G + + + +L K+L
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 16/246 (6%)
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P V+ N+L + ++ + F T G +P+ T + S
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLDTT-------------GFKPEPTLLEQYVKCLSE 157
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ +++ + ++K+ GI +V T SV+ +L+ L EMV S +
Sbjct: 158 EGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI- 216
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
C + D +L K+ + GL P + Y L+ F + + E+ M
Sbjct: 217 -RCLIRALCDGGDVSEGYELLKQGLKQGL-DPGQYVYAKLISGFCEIGNYACMSEVLHTM 274
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
P + +Y +I GLC KK EA F + +KG+ P +V + T+ RG + L
Sbjct: 275 IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWL 334
Query: 461 RTWRRL 466
+ R+L
Sbjct: 335 GSARKL 340
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 23/329 (6%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRH-CRFNPDVKMYTVLIYGWC----KLGRVETAQS 209
++ L+ + K G ++A +F+ K CR PD +Y LI K +E +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCR--PDASVYNALITAHLHTRDKAKALEKVRG 193
Query: 210 FLNEMVERGIE---PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
+L++M +GIE PNVVTYN+LL + + + +F ++ + P
Sbjct: 194 YLDKM--KGIERCQPNVVTYNILLRAFAQ----------SGKVDQVNALFKDLDMSPVSP 241
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
DV +F+ V+ Y + + M+ P + T+ +I E E F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
++RS P T+N Y + D A +FKKM + P+ TY ++ M+
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYI-PSFITYECMIMMYGY 360
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+ +EI+ ++ ES ++ C + EA + F P T
Sbjct: 361 CGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAST 420
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESI 475
++ LY+ ++DM + L KK++++ I
Sbjct: 421 YKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 118/273 (43%), Gaps = 14/273 (5%)
Query: 153 EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLN 212
+H +L + L K EVF ++ + PD +Y+ LI K G+ A +
Sbjct: 98 DHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFS 157
Query: 213 EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE---PDVT 269
EM G P+ YN L+ LH ++ + + D+M +GIE P+V
Sbjct: 158 EMKNSGCRPDASVYNALITA-----HLHTRDK-AKALEKVRGYLDKM--KGIERCQPNVV 209
Query: 270 SFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
+++I+L ++++ K F+ + + P V T+ V+ G +++ E + M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 330 VRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADM 389
+ P +T+N Y +++ + + FK + PT T+ ++ + KA M
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMIINYGKARM 328
Query: 390 IGVVKEIWRDMKESGVGPDLDLY--TLLIHGLC 420
I + +++ M + P Y ++++G C
Sbjct: 329 IDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
Query: 288 LDKFR-MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
L+ FR M K++ P Y+ +I + G+ A LF EM SG P A YN
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 347 EYRGRKDADSALKLFK----KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
+ +D AL+ + KMK C P TY +LL+ F ++ + V +++D+
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 403 SGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
S V PD+ + ++ + +E M P +TF L
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVL 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 96/220 (43%), Gaps = 10/220 (4%)
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC----LAS 315
++R PD +S ++ V + + ++++ F MK G P + Y ++I
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 316 CGRLEDAEGLFDEMVRSGVSPC---AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
LE G D+M G+ C VTYN + + D LFK + + SP
Sbjct: 185 AKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV-SP 241
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
+T+ ++ + K MI ++ + M+ + PD+ + +LI +++++ + Q F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
++ P TF ++ ++ M+ + KK+++
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 200 KLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEM 259
K G++++ ++M G++P+VVTYN LL G + + +P+ A ++ E+
Sbjct: 178 KNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK---------AIELIGEL 228
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
GI+ D + VL + + + + + + + MK +G P + Y+S++ + G
Sbjct: 229 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
+ A+ L EM G+ P V K Y D + +L +++ G + Y +
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY-AENEMPYCM 347
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
L+ KA + + I+ DMK GV D +++I LC K+++EA + +
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 440 FLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
V T+ ++ + + R+ KK+DE+++S
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 136/344 (39%), Gaps = 47/344 (13%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCK 164
++ + K + D +L +M + L P+ T+ L+ + K
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIK----------------VK 215
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
GY K A E+ G H D MY ++ GR E A++F+ +M G PN+
Sbjct: 216 NGYPK-AIELI-GELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIY 273
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
Y+ LLN ++ + AD++ EM+ G+ P+ + +L VY +
Sbjct: 274 HYSSLLNSYS----------WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
S + ++ G Y ++ L+ G+LE+A +FD+M GV +
Sbjct: 324 DRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIM 383
Query: 345 FKEYRGRKDADSAL---KLFKKMKEDGLCSPTAH------TYGVLLQMFLKADMIGVVKE 395
SAL K FK+ KE S T + +L + +A + V
Sbjct: 384 I----------SALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMR 433
Query: 396 IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
+ + M E V PD + + +LI + K A Q ++M KG
Sbjct: 434 MMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 250 RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSV 309
+D ++F+ M++ G + V+++S + + A +L+ ++ + ++ V S+
Sbjct: 115 QDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSI 172
Query: 310 IKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA-DSALKLFKKMKEDG 368
+ CL G+L+ LFD+M R G+ P VTYN K+ A++L ++ +G
Sbjct: 173 LSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNG 232
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
+ + YG +L + + + MK G P++ Y+ L++ + +++A
Sbjct: 233 IQMDSV-MYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 471
+ EM G +P KV TL + I+ + R L +L+
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 22/264 (8%)
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFER 247
V +T +I G+ K +VE A++ +M + N+VT+N +++G + PE
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVE--NSRPE----- 266
Query: 248 TIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
D K+F M E GI P+ + S L S QL +++ + +C V T
Sbjct: 267 ---DGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALT 323
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKED 367
S+I CG L DA LF+ M + V V +N Y +AD AL LF++M ++
Sbjct: 324 SLISMYCKCGELGDAWKLFEVMKKKDV----VAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM-KESGVGPDLDLYTLLIHGLCERKKWR 426
+ P T+ +L A ++ + + M ++ V P D YT ++ L K
Sbjct: 380 KI-RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 427 EACQFFVEMIEKGFLPQKVTFETL 450
EA + M F P F TL
Sbjct: 439 EALKLIRSM---PFRPHAAVFGTL 459
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 23/329 (6%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRH-CRFNPDVKMYTVLIYGWC----KLGRVETAQS 209
++ L+ + K G ++A +F+ K CR PD +Y LI K +E +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCR--PDASVYNALITAHLHTRDKAKALEKVRG 193
Query: 210 FLNEMVERGIE---PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
+L++M +GIE PNVVTYN+LL + + + +F ++ + P
Sbjct: 194 YLDKM--KGIERCQPNVVTYNILLRAFAQ----------SGKVDQVNALFKDLDMSPVSP 241
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
DV +F+ V+ Y + + M+ P + T+ +I E E F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
++RS P T+N Y + D A +FKKM + P+ TY ++ M+
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYI-PSFITYECMIMMYGY 360
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+ +EI+ ++ ES ++ C + EA + F P T
Sbjct: 361 CGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAST 420
Query: 447 FETLYRGLIQSDMLRTWRRLKKKLDEESI 475
++ LY+ ++DM + L KK++++ I
Sbjct: 421 YKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 118/273 (43%), Gaps = 14/273 (5%)
Query: 153 EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLN 212
+H +L + L K EVF ++ + PD +Y+ LI K G+ A +
Sbjct: 98 DHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFS 157
Query: 213 EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIE---PDVT 269
EM G P+ YN L+ LH ++ + + D+M +GIE P+V
Sbjct: 158 EMKNSGCRPDASVYNALITA-----HLHTRDK-AKALEKVRGYLDKM--KGIERCQPNVV 209
Query: 270 SFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
+++I+L ++++ K F+ + + P V T+ V+ G +++ E + M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 330 VRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADM 389
+ P +T+N Y +++ + + FK + PT T+ ++ + KA M
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE-KPTLPTFNSMIINYGKARM 328
Query: 390 IGVVKEIWRDMKESGVGPDLDLY--TLLIHGLC 420
I + +++ M + P Y ++++G C
Sbjct: 329 IDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
Query: 288 LDKFR-MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK 346
L+ FR M K++ P Y+ +I + G+ A LF EM SG P A YN
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 347 EYRGRKDADSALKLFK----KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
+ +D AL+ + KMK C P TY +LL+ F ++ + V +++D+
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 403 SGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
S V PD+ + ++ + +E M P +TF L
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVL 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 96/220 (43%), Gaps = 10/220 (4%)
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC----LAS 315
++R PD +S ++ V + + ++++ F MK G P + Y ++I
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 316 CGRLEDAEGLFDEMVRSGVSPC---AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
LE G D+M G+ C VTYN + + D LFK + + SP
Sbjct: 185 AKALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV-SP 241
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
+T+ ++ + K MI ++ + M+ + PD+ + +LI +++++ + Q F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
++ P TF ++ ++ M+ + KK+++
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 20/306 (6%)
Query: 147 DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNK-----RHCRFNPDVKMYTVLIYGWCKL 201
D + T + ++++ K+G K+ E+ + + CRF+ + + IYG
Sbjct: 90 DYQPTESLYALMIN---KFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLA- 145
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
GR+ A L M + G P+ ++N +LN + + + K+F +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSA----------KLFDEIHKIFVSAPK 195
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
G+E D +I++ + + +L +Q P V T++ +I+ + G+ E+
Sbjct: 196 LGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEE 255
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
A L + M + + P +T+N R + + + L ++MK G C P TY +L
Sbjct: 256 AFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG-CEPNPGTYQEVL 314
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
L KE+ M G+ P Y ++ GLCE K E +M+ GF+
Sbjct: 315 YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Query: 442 PQKVTF 447
P+ + +
Sbjct: 375 PKTLMW 380
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++LI + + + A QL+ E Q+ PN TF LIR
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIR------------------G 246
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
C G + A ++ ++ R PD + +LI G K GRVE L M +G EP
Sbjct: 247 FCNKGKFEEAFKLLERMEKE-RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEP 305
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF-SIVLHVYSR 280
N TY +L G+ K +R + +A ++ +M G+ P S+ +VL +
Sbjct: 306 NPGTYQEVLYGLLDK---------KRNL-EAKEMMSQMISWGMRPSFLSYKKMVLGLCE- 354
Query: 281 AHKPQLSLD-KFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEM 329
K + +D R M G P + V++C+ S +D++ D +
Sbjct: 355 -TKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNN-DDSQANLDRI 402
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 136/295 (46%), Gaps = 21/295 (7%)
Query: 185 NPDVK---MYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
+P +K Y+ LI + + A +M + G + V++N LLN LH
Sbjct: 96 DPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNAC-----LH- 149
Query: 242 EERFERTIRDADKVFDEMRER--GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
+ F++ ++FDE+ +R I PD S+ I++ Y + P+ +++ R M+ +G+
Sbjct: 150 SKNFDKV----PQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGM 205
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
T +T+++ L G LE A+ L++EMV+ G YN + ++ + +
Sbjct: 206 EVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQ-KESPERVKE 264
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
L ++M GL P +Y L+ + + M+ K+++ ++ + P+ + LI L
Sbjct: 265 LIEEMSSMGL-KPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHL 323
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS----DMLRTWRRLKKKL 470
C + + + F + + +P T + L GL+++ D R +KKK
Sbjct: 324 CYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKF 378
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 146/379 (38%), Gaps = 83/379 (21%)
Query: 94 NPPLSHSSFH-LLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTS 152
+P + F+ LI + + F+ A + +MDQ TP R VS
Sbjct: 96 DPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYG-TP---------RSAVS------ 139
Query: 153 EHFTVLLDTLCKYGYVKLAAEVFNG-NKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFL 211
F LL+ ++F+ +R+ + PD Y +LI +C G E A +
Sbjct: 140 --FNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIM 197
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
+M +G+E + + +L+ + +K L AD +++EM ++G E D ++
Sbjct: 198 RQMQGKGMEVTTIAFTTILSSLYKKGELEV----------ADNLWNEMVKKGCELDNAAY 247
Query: 272 SIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR 331
++ R+M Q P E + L +EM
Sbjct: 248 NV------------------RIMSAQKESP------------------ERVKELIEEMSS 271
Query: 332 SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG 391
G+ P ++YN Y R D A K+++ + E C+P A T+ L+ + +
Sbjct: 272 MGLKPDTISYNYLMTAYCERGMLDEAKKVYEGL-EGNNCAPNAATFRTLIFHLCYSRLYE 330
Query: 392 VVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLY 451
I++ PD + L+ GL E KK R+ + + ++K F P
Sbjct: 331 QGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKK-RDDAKGLIRTVKKKFPPS-------- 381
Query: 452 RGLIQSDMLRTWRRLKKKL 470
L W++L+++L
Sbjct: 382 -------FLNAWKKLEEEL 393
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 179/415 (43%), Gaps = 57/415 (13%)
Query: 94 NPPLSHSSF--HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVS--DTK 149
+P +H+S + ++ + R DL W+L E+ +R L N TF ++++ L S + K
Sbjct: 105 HPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLV-NDKTFRIVLKTLASARELK 163
Query: 150 TTSEHFTVL---------------LDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL 194
+F ++ ++TLCK V+ A VF K + PD Y +
Sbjct: 164 KCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIK--PDEITYRTM 221
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I G+C +G + A N M++ G + ++ ++ + +K +F+ +A K
Sbjct: 222 IQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKK------NQFD----EASK 271
Query: 255 VFDEM-RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
VF M +RG + D + +++ + + ++ F M+E+G+ T+ S+I L
Sbjct: 272 VFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGL 331
Query: 314 ASCGRLEDAEGLFDEMVRSGV-SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
R+ +A GL + GV +P Y+ K K A A ++F+KM + G C P
Sbjct: 332 LVKRRVVEAYGLVE-----GVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRG-CEP 385
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD--LDLYTLLIHGLCERKKWREACQ 430
HTY +LLQ L + GPD ++ T+ + G+ + K E +
Sbjct: 386 IMHTYLMLLQGHLG--------------RRGRKGPDPLVNFDTIFVGGMIKAGKRLETTK 431
Query: 431 FFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI-SFGSEFQNY 484
+ +++G + + + + + + KKL E S+ FQ Y
Sbjct: 432 YIERTLKRGLEVPRFDYSKFLHYYSNEEGVVMFEEMAKKLREVSLFDLADIFQRY 486
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 18/271 (6%)
Query: 193 VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDA 252
+++YG K G + A M G + +V ++N L + LH F
Sbjct: 113 IMLYG--KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEF------- 163
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
+ D + GI+ D SF+I + + + R M++ G+ P V TYT++I
Sbjct: 164 --LHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISA 221
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNC---FFKEYRGRKDADSALKLFKKMKEDGL 369
L R GL++ MV G P T+N F R DA+ L L K++
Sbjct: 222 LYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ---- 277
Query: 370 CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
P + TY ++++ F A + + ++ M G P+L +Y +IH LC+ + A
Sbjct: 278 VEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAY 337
Query: 430 QFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
+ + K + P T E L +GL++ L
Sbjct: 338 TMCKDCMRKKWYPNLDTVEMLLKGLVKKGQL 368
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
SF++ I + ++ D A+ + EM++ LTP+ T+ LI L +
Sbjct: 179 SFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHER----------- 227
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
C G V G K P++ + V I R A L M + +E
Sbjct: 228 --CVIGNGLWNLMVLKGCK------PNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVE 279
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+ +TYN+++ G R A++V+ M +G +P++ + ++H +
Sbjct: 280 PDSITYNMVIKGFF----------LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCK 329
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
A L+ + + P + T ++K L G+L+ A+ + E+V V P
Sbjct: 330 AGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 28/306 (9%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFN---GNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFL 211
+++L+ + G +LA +V++ NK R + MY +I K + + A
Sbjct: 252 YSLLVSIFVRCGRSELALDVYDEMVNNKISLREDA---MYA-MISACTKEEKWDLALKIF 307
Query: 212 NEMVERGIEPNVVTYNVLLN--GVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVT 269
M+++G++PN+V N L+N G KV L KV+ ++ G +PD
Sbjct: 308 QSMLKKGMKPNLVACNTLINSLGKAGKVGL------------VFKVYSVLKSLGHKPDEY 355
Query: 270 SFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP-TVATYTSVIKCLASCGRLEDAEGLFDE 328
+++ +L +A++ + L F M++ + +C Y + + G E A L E
Sbjct: 356 TWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYE 415
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
M SG++ +YN + + AL +++ M + C P TY L++ +
Sbjct: 416 MEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRD-CKPNTFTYLSLVRSCIWGS 474
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
+ V++I + V PD+ LY IHG+C R++++ A + +V+M E G P T
Sbjct: 475 LWDEVEDILKK-----VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRA 529
Query: 449 TLYRGL 454
+ + L
Sbjct: 530 MMLQNL 535
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+R A ++FD MR G++P+ + + L R Q + F M+++ T TY+
Sbjct: 123 VRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN-VTGHTYSL 181
Query: 309 VIKCLASCGRLEDAEGLFDEMVR--------------SGVSPCAVTYNCFFKEYRGRKDA 354
++K +A E A +F E+ R + +S C N + E
Sbjct: 182 MLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETE------- 234
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
++++ MK DG T TY +L+ +F++ + +++ +M + + D
Sbjct: 235 ----RIWRVMKGDGHIG-TEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYA 289
Query: 415 LIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
+I + +KW A + F M++KG P V TL L
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSL 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 87/217 (40%)
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
V+DEM I + ++ ++ K L+L F+ M ++G+ P + ++I L
Sbjct: 271 VYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLG 330
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G++ ++ + G P T+N + L+LF ++ + LC
Sbjct: 331 KAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNE 390
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
+ Y + K ++ +M+ SG+ Y L+I + +K + A +
Sbjct: 391 YLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEH 450
Query: 435 MIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 471
M ++ P T+ +L R I + + KK++
Sbjct: 451 MAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVE 487
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
M+ I P +TYN +++G C+ + + DA ++ D M +G PDV +FS
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCK----------QDRVDDAKRMLDSMASKGCSPDVVTFST 50
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
+++ Y +A + ++ F M +GI TYT++I G L+ A+ L +EM+ G
Sbjct: 51 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 110
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
V+P +T++C +K+ A + + +++
Sbjct: 111 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 299 ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSAL 358
I PT TY S+I R++DA+ + D M G SP VT++ Y K D+ +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 359 KLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHG 418
++F +M G+ + T TY L+ F + + +++ +M GV PD + ++ G
Sbjct: 66 EIFCEMHRRGIVANTV-TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 419 LCERKKWREA 428
LC +K+ R+A
Sbjct: 125 LCSKKELRKA 134
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
M+R + P +TYN + + D A ++ M G CSP T+ L+ + KA
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAK 59
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
+ EI+ +M G+ + YT LIHG C+ A EMI G P +TF
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 449 TLYRGLIQSDMLR 461
+ GL LR
Sbjct: 120 CMLAGLCSKKELR 132
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 29/144 (20%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ +ID K + D A +++ M + +P+ TF LI
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN------------------ 53
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFN-----PDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
GY K A V NG + C + + YT LI+G+C++G ++ AQ LNEM+
Sbjct: 54 -----GYCK-AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 107
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSL 239
G+ P+ +T++ +L G+C K L
Sbjct: 108 SCGVAPDYITFHCMLAGLCSKKEL 131
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 39/324 (12%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-----------------RRLVSD 147
LI K+ + A+ + ++ ++ TPN T+ + + + L S
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 148 TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL-GRVET 206
+ E ++ CK G + A V+ K + P + LI CK G +
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPP-RFVATLITALCKNDGTITF 355
Query: 207 AQSFLNEMV----ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
AQ L ++ RGI+P ++ +++ +CR R ++DA + +M +
Sbjct: 356 AQEMLGDLSGEARRRGIKP----FSDVIHSLCRM----------RNVKDAKALLLDMISK 401
Query: 263 GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
G P F++V+H S+ + + ++M+ +G+ P V TYT +I A G +++A
Sbjct: 402 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 461
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQ 382
+ + E + VTY+ + Y ++ D ALKL +M G+ P A Y L+Q
Sbjct: 462 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGV-QPNADEYNKLIQ 520
Query: 383 MF-LKADMIGVVKEIWRDMKESGV 405
F LKA + ++ +MK+ G+
Sbjct: 521 SFCLKALDWEKAEVLFEEMKQKGL 544
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 25/295 (8%)
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
YG L E+ G K C ++++ LI + KLG+ + A ++ E G PN
Sbjct: 211 YGLWDLVKEI--GEKESCGV-LNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAK 267
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRD-ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
TY + L +C+ R+ D A V ++M + G+ + ++ + + K
Sbjct: 268 TYYLTLEALCK-----------RSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGK 316
Query: 284 PQLSLDKFRMMK--EQGICPT-VAT-YTSVIKCLASCGRLEDAEG-LFDEMVRSGVSPCA 338
+ + + + K E+ + P VAT T++ K + ++ G L E R G+ P +
Sbjct: 317 AEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFS 376
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
+ + R KDA + L M G +P + +++ K + KE+ +
Sbjct: 377 DVIHSLCR-MRNVKDAKA---LLLDMISKG-PAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
M+ G+ PD+ YT++I G + EA + E +K VT+ L RG
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 486
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 122/271 (45%), Gaps = 29/271 (10%)
Query: 95 PPLSHSSF-HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSE 153
P +S F +I+ +V F+ A ++ EM +R + K T+
Sbjct: 101 PNMSKEGFVARIINLYGRVGMFENAQKVFDEMPER------------------NCKRTAL 142
Query: 154 HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNE 213
F LL+ L +F PDV Y LI G C G A + ++E
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
+ +G++P+ +T+N+LL+ + + +FE + ++++ M E+ ++ D+ S++
Sbjct: 203 IENKGLKPDHITFNILLH------ESYTKGKFE----EGEQIWARMVEKNVKRDIRSYNA 252
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
L + +K + + F +K + P V T+T++IK S G+L++A + E+ ++G
Sbjct: 253 RLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNG 312
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
P +N D +SA +L K++
Sbjct: 313 CRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GICPTVATYTSV 309
+A KVFDEM ER + SF+ +L+ + K L F+ + + I P VA+Y ++
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 310 IKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
IK L G +A L DE+ G+ P +T+N E + + +++ +M E +
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 370 CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
LL + ++ +V ++ +K + + PD+ +T +I G K EA
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMVS-LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 430 QFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 470
++ E+ + G P K F +L + ++ L + L K++
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 136/345 (39%), Gaps = 68/345 (19%)
Query: 82 ALSLFNYAKSLPNPPLS---HSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFL 138
A SLFN + PL H+S ++A V +Q I + Q + P STFL
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILK-SQPNFRPGRSTFL 126
Query: 139 VLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGW 198
+L+ ++ + +L+ + G PD + +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNG-----------------LEPDQVTTDIAVRSL 169
Query: 199 CKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDE 258
C+ GRV+ A+ + E+ E+ P+ TYN LL +C+ LH F DE
Sbjct: 170 CETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF----------VDE 219
Query: 259 MRER-GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
MR+ ++PD+ SF+I++ +C +
Sbjct: 220 MRDDFDVKPDLVSFTILI---------------------DNVC--------------NSK 244
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
L +A L ++ +G P YN K + A+ ++KKMKE+G+ P TY
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV-EPDQITY 303
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
L+ KA + + + M ++G PD YT L++G+C +
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 12/287 (4%)
Query: 171 AAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV--ERGIEPNVVTYNV 228
A +FN R D+K + ++ + + V ++ + P T+ +
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 229 LLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSL 288
LL+ CR + +I + +V + M G+EPD + I + + +
Sbjct: 128 LLSHACRAP--------DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 289 DKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS-GVSPCAVTYNCFFKE 347
D + + E+ P TY ++K L C L DEM V P V++
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
K+ A+ L K+ G P Y +++ F +++ MKE GV P
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGF-KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
D Y LI GL + + EA + M++ G+ P T+ +L G+
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 8/222 (3%)
Query: 249 IRDADKVFDEM--RERGIEPDVTSFSIVLHVYSRAHKPQLSLDK----FRMMKEQGICPT 302
+ D K+F + + P ++F I+L RA P S+ +M G+ P
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRA--PDSSISNVHRVLNLMVNNGLEPD 158
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
T ++ L GR+++A+ L E+ P TYN K KD +
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD 218
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+M++D P ++ +L+ + + + + +G PD LY ++ G C
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
K EA + +M E+G P ++T+ TL GL ++ + R
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 29/247 (11%)
Query: 90 KSLPNPPLSHSSFHLLIDTMAKVRQFDLA--WQLITEMDQRSLTPNPSTFLVLIRRL--- 144
KS PN S+F +L+ + ++ +++ M L P+ T + +R L
Sbjct: 113 KSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 172
Query: 145 --VSDTKT-----TSEH-------FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKM 190
V + K T +H + LL LCK + + E + + PD+
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
+T+LI C + A ++++ G +P+ YN ++ G C +S E
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC-TLSKGSE-------- 283
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
A V+ +M+E G+EPD +++ ++ S+A + + + + M + G P ATYTS++
Sbjct: 284 -AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 311 KCLASCG 317
+ G
Sbjct: 343 NGMCRKG 349
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 34/326 (10%)
Query: 96 PLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV--SDTKTTSE 153
P S + +LI A+ R+ + +L E + L +P L ++ V + +TT E
Sbjct: 280 PESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLE 339
Query: 154 HFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNE 213
+ K L A + NG + F VK+Y + C+ G+V
Sbjct: 340 VVAAMRKAELKVTDCILCA-IVNGFSKQRGFAEAVKVYEWAMKEECEAGQV--------- 389
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
TY + +N CR E++ + A+ +FDEM ++G + V ++S
Sbjct: 390 -----------TYAIAINAYCRL------EKYNK----AEMLFDEMVKKGFDKCVVAYSN 428
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
++ +Y + + ++ MK++G P + Y S+I L AE ++ EM R+
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
V P V+Y Y K+ + ++L+++ + + A G+++ +F K I +
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMA-GIMVGVFSKTSRIDEL 547
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGL 419
+ +DMK G D LY+ ++ L
Sbjct: 548 MRLLQDMKVEGTRLDARLYSSALNAL 573
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 110/281 (39%), Gaps = 48/281 (17%)
Query: 190 MYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 249
+YT++ K GR A L EM ++GI + Y++L+ R +
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEA----------REV 299
Query: 250 RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMM--------------- 294
+K+F E + + D V+ +Y R + +L+ M
Sbjct: 300 VITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAI 359
Query: 295 -----KEQGICPTVATY-------------TSVIKCLASCGRLE---DAEGLFDEMVRSG 333
K++G V Y T I A C RLE AE LFDEMV+ G
Sbjct: 360 VNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYC-RLEKYNKAEMLFDEMVKKG 418
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
C V Y+ Y + A++L KMK+ G C P Y L+ M +A +
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRG-CKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
++IW++MK + V PD YT +I K+ + + E
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 122/282 (43%), Gaps = 25/282 (8%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRK------VSL 239
PD +T +I + G + A + +M G EP+ VT +++ R +SL
Sbjct: 208 PDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSL 267
Query: 240 HPEERFERTIRDAD-------------------KVFDEMRERGIEPDVTSFSIVLHVYSR 280
+ R E+ DA +++EM+ G++P++ ++ ++ R
Sbjct: 268 YDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGR 327
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
A +P + ++ + G P +TY ++++ +DA ++ EM G+S +
Sbjct: 328 AKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVIL 387
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
YN + D A ++F+ MK C P + T+ L+ ++ + + + M
Sbjct: 388 YNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQM 447
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
+E+G P L + T +I + K+ + + F +++E G P
Sbjct: 448 REAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLF 326
+V +++ + V+ ++ + S F M E+GI P AT+T++I C G + A F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK 386
++M G P VT Y + D AL L+ + + + A T+ L++++
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKW-RIDAVTFSTLIRIYGV 292
Query: 387 ADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVT 446
+ I+ +MK GV P+L +Y LI + K+ +A + ++I GF P T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 447 FETLYRGLIQS----DMLRTWRRLKKK 469
+ L R ++ D L +R +K+K
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEK 379
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 137/325 (42%), Gaps = 30/325 (9%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR--RLVSDTKTTSEHF---- 155
+++ + K + + + +L EM +R + P+ +TF +I R K E F
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 156 -----------TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
++D + G V +A +++ R ++ D ++ LI + G
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYD-RARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
+ + EM G++PN+V YN L++ + R + A ++ ++ G
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRA----------KRPWQAKIIYKDLITNGF 346
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
P+ ++++ ++ Y RA +L +R MKE+G+ TV Y +++ A +++A
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406
Query: 325 LFDEMVR-SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
+F +M P + T++ Y A +M+E G PT ++Q
Sbjct: 407 IFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGF-EPTLFVLTSVIQC 465
Query: 384 FLKADMIGVVKEIWRDMKESGVGPD 408
+ KA + V + + E G+ PD
Sbjct: 466 YGKAKQVDDVVRTFDQVLELGITPD 490
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR------------RLVSDTK 149
++ LID+M + ++ A + ++ TPN ST+ L+R + + K
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 150 TTSEHFTVLLD----TLCKYG-YVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
TV+L ++C YV A E+F K +PD ++ LI + GRV
Sbjct: 378 EKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 205 ETAQSFLNEMVERGIEPN--VVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER 262
A++ L +M E G EP V+T + G ++V D + FD++ E
Sbjct: 438 SEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD------------DVVRTFDQVLEL 485
Query: 263 GIEPDVTSFSIVLHVYSR 280
GI PD +L+V ++
Sbjct: 486 GITPDDRFCGCLLNVMTQ 503
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHV 277
GIEP++ TYN ++ C + + + EM +GI+P+ +SF +++
Sbjct: 182 GIEPDLETYNRMIKVFCESG----------SASSSYSIVAEMERKGIKPNSSSFGLMISG 231
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
+ K MMK++G+ V+TY I+ L + ++A+ L D M+ +G+ P
Sbjct: 232 FYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPN 291
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
VTY+ + D + A KLFK M G C P + Y L+ K +
Sbjct: 292 TVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG-CKPDSECYFTLIYYLCKGGDFETALSLC 350
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
++ E P + L++GL + K EA + ++ EK
Sbjct: 351 KESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 17/252 (6%)
Query: 233 VCRKVSLHPEERFERTIRDAD----------KVFDEMRERGIE--PDVTSFSIVLH---V 277
+CR SL P+ R +R A + + IE PD+ S H +
Sbjct: 66 ICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL 125
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS-GVSP 336
Y++A+ SL FR +++ I TV + +++ ++A+ ++ EM + G+ P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
TYN K + A S+ + +M+ G+ P + ++G+++ F D V ++
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGI-KPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
MK+ GV + Y + I LC+RKK +EA M+ G P VT+ L G
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 457 SDMLRTWRRLKK 468
D ++L K
Sbjct: 305 EDDFEEAKKLFK 316
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 121 LITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKR 180
++ EM+++ + PN S+F ++I ++ K S+ +L + G
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDK--SDEVGKVLAMMKDRG-------------- 252
Query: 181 HCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLH 240
N V Y + I CK + + A++ L+ M+ G++PN VTY+ L++G C
Sbjct: 253 ---VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN----- 304
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
E+ FE +A K+F M RG +PD + +++ + + +L + E+
Sbjct: 305 -EDDFE----EAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEM 329
P+ + S++ LA ++E+A+ L ++
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 293 MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRK 352
M K GI P + TY +IK G + + EM R G+ P + ++ +
Sbjct: 177 MPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAED 236
Query: 353 DADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLY 412
+D K+ MK+ G+ + TY + +Q K K + M +G+ P+ Y
Sbjct: 237 KSDEVGKVLAMMKDRGV-NIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 295
Query: 413 TLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ LIHG C + EA + F M+ +G P + TL
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL 333
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 149/354 (42%), Gaps = 62/354 (17%)
Query: 118 AWQLITEMDQRSLTPNPSTFLVLIRRL-------------VSDTKTTSEHFTVLLDTLCK 164
A L +EM ++ + PN T+ V++ L ++ + +S T LLD K
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
G V+ AA+VF+G + D+ ++ ++ G+ + G E A E+ + GI+PN
Sbjct: 441 LGKVEEAAKVFSGID-----DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 225 TYNVLLNGVC--RKVSLHPEERF-------------------------ERTIRDADKVFD 257
T++ +LN VC S+ ++F + I A++VF
Sbjct: 496 TFSSILN-VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
RE+ D+ S++ ++ Y++ + +LD F+ MK++ + T+ V G
Sbjct: 555 RQREK----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
Query: 318 RLEDAEGLFDEMVRS-GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHT 376
+E+ E FD MVR ++P +C Y + A+K+ + M +P T
Sbjct: 611 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP-----NPAGST 665
Query: 377 YGVLLQMFLKADMIGVVKEIWRDMKESGVG---PDLDLYTLLIHGLCERKKWRE 427
+ + L A + E+ R E + D Y LL + E W+E
Sbjct: 666 ---IWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 123/321 (38%), Gaps = 55/321 (17%)
Query: 170 LAAEVFNGNKRHCR-----FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
L E+F G + HC+ F DV + T L+ + K + + +EM ER NVV
Sbjct: 106 LCDELF-GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVV 160
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
T+ L++G R S++ E +F M+ G +P+ +F+ L V +
Sbjct: 161 TWTTLISGYARN-SMNDE---------VLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
L ++ + G+ T+ S+I CG + A LFD+ V VT+N
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV----VTWNSM 266
Query: 345 FKEYRGRKDADSALKLFKKMKED-------------GLCSP------------TAHTYGV 379
Y AL +F M+ + LC+ + YG
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 380 LL-QMFLKADMIGVVK-----EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
L Q A M+ K + R KE G ++ +T +I G + EA F
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 434 EMIEKGFLPQKVTFETLYRGL 454
EM KG P + T+ + L
Sbjct: 387 EMKRKGVRPNEFTYSVILTAL 407
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 49/319 (15%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL +F Y+ L LS SSF +I A +++ QL + + + + L
Sbjct: 279 ALGMF-YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL- 336
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
+V+ +K T+ +LD L +L E+ C N V +T +I G+ +
Sbjct: 337 --MVAYSKCTA-----MLDAL------RLFKEI------GCVGN--VVSWTAMISGFLQN 375
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNG--VCRKVSLHPE---ERFERT-------- 248
E A +EM +G+ PN TY+V+L V +H + +ER+
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALL 435
Query: 249 --------IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
+ +A KVF + ++ D+ ++S +L Y++ + + ++ F + + GI
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 301 PTVATYTSVIK-CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
P T++S++ C A+ + + ++S + + Y + + +SA +
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 360 LFKKMKEDGLCSPTAHTYG 378
+FK+ +E L S + G
Sbjct: 552 VFKRQREKDLVSWNSMISG 570
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PD Y+ ++ + K G+VE S V G +P+ + ++VL + E
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL-------GKMFGEAGD 306
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
IR V EM+ ++P+V ++ +L RA KP L+ F M E G+ P T
Sbjct: 307 YDGIR---YVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKT 363
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
T+++K DA L++EM + YN + A +LF MK
Sbjct: 364 LTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
E C P +Y +L ++ E++ +M ++GV ++ T L+ L + K+
Sbjct: 424 ESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRI 483
Query: 426 REACQFFVEMIEKGFLP 442
+ F I++G P
Sbjct: 484 DDVVYVFDLSIKRGVKP 500
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 205 ETAQSFLNEMVERGIEP-NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ +F N + + + P + YNV + + RF R + +++ EM + G
Sbjct: 167 QKTHTFFNWVKSKSLFPMETIFYNVTMKSL----------RFGRQFQLIEEMALEMVKDG 216
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
+E D ++S ++ R + +++ F M + G+ P TY++++ + G++E+
Sbjct: 217 VELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVL 276
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
L++ V +G P A+ ++ K + D D + ++MK + P Y LL+
Sbjct: 277 SLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDV-KPNVVVYNTLLEA 335
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
+A G+ + ++ +M E+G+ P+ T L+ + + R+A Q + EM K +
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 444 KVTFETL 450
+ + TL
Sbjct: 396 FILYNTL 402
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 155/364 (42%), Gaps = 44/364 (12%)
Query: 84 SLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-- 141
+ FN+ KS P+ +++ + ++ RQF L ++ EM + + + T+ +I
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 230
Query: 142 ---------------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCR--F 184
R + ++ +LD K G V+ EV + +R +
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVE---EVLSLYERAVATGW 287
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR--KVSLHPE 242
PD ++VL + + G + + L EM ++PNVV YN LL + R K L
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGL--- 344
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
A +F+EM E G+ P+ + + ++ +Y +A + +L + MK +
Sbjct: 345 ---------ARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 303 VATYTSVIKCLASCGRLEDAEGLFDEMVRS-GVSPCAVTYNCFFKEYRGRKDADSALKLF 361
Y +++ A G E+AE LF++M S P +Y Y A+ A++LF
Sbjct: 396 FILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELF 455
Query: 362 KKMKEDGLCSPTAHTYG--VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL--IH 417
++M + G+ + G L+Q KA I V ++ + GV PD L L +
Sbjct: 456 EEMLKAGV---QVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVM 512
Query: 418 GLCE 421
LCE
Sbjct: 513 ALCE 516
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 15/265 (5%)
Query: 175 FNGNKRHCRFNPDVKMYTVLIYGWCKLGR-VETAQSFLNEMVERGIEPNVVTYNVLLNGV 233
FN K F + Y V + + GR + + EMV+ G+E + +TY+ ++
Sbjct: 173 FNWVKSKSLFPMETIFYNVTMKS-LRFGRQFQLIEEMALEMVKDGVELDNITYSTIIT-C 230
Query: 234 CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM 293
++ +L+ A + F+ M + G+ PD ++S +L VYS++ K + L +
Sbjct: 231 AKRCNLY---------NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
G P ++ + K G + + EM V P V YN E GR
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLL-EAMGRAG 340
Query: 354 ADS-ALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLY 412
A LF +M E GL +P T L++++ KA ++W +MK D LY
Sbjct: 341 KPGLARSLFNEMLEAGL-TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 413 TLLIHGLCERKKWREACQFFVEMIE 437
L++ + EA + F +M E
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKE 424
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
M + G+ TY+++I C C A F+ M ++G+ P VTY+ Y
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 354 ADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYT 413
+ L L+++ G P A + VL +MF +A ++ + ++MK V P++ +Y
Sbjct: 272 VEEVLSLYERAVATGW-KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 414 LLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 469
L+ + K A F EM+E G P + T L + ++ D L+ W +K K
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 24/352 (6%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
++ +LL+ + +V + DLA Q+ EM+ + P+ ++ +L++ + K E T LL
Sbjct: 153 TALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL--EEATHLL 210
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
Y ++ +G D+ +Y +L+ C G V+ A L +++ +G+
Sbjct: 211 -----YSMFWRISQKGSGE--------DIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
+ Y+ + G H E E I ++ E RG P + S+S +
Sbjct: 258 KAPKRCYHHIEAG-------HWESSSE-GIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD-EMVRSGVSPCA 338
K + M+ +G PT Y + +K L G+L++A + + EM++ P
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
YN K + A+ KKM + C TY L+ + ++
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+M P ++ Y ++I GLC+ + EA + EM+ + +P+ ++ L
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 158/436 (36%), Gaps = 68/436 (15%)
Query: 82 ALSLFNYAKS-LPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
AL LF AK P+ + S + +ID + K + +I M + S S F +
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 141 IRRL---------VSDTKTTSE--------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
IR +S K+ E F LL + K ++ A +F
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
N + +L+ C++ R + A EM +G P+ +Y +L+ G C E
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL------EG 201
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF------------ 291
+ E +F + ++G D+ + I+L A + +++
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 292 ----------------------RMMKE---QGICPTVATYTSVIKCLASCGRLEDAEGLF 326
R++ E +G P + +Y+++ L G+L + E +
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL- 385
M G P Y K A+ + K G C PT Y VL++
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD 381
Query: 386 ---KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
+ +G +K++ K+ + + Y L+ GLC ++ EA Q EM+ K P
Sbjct: 382 DGKSMEAVGYLKKM---SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 443 QKVTFETLYRGLIQSD 458
T+ + +GL D
Sbjct: 439 GVETYHMMIKGLCDMD 454
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 24/352 (6%)
Query: 100 SSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLL 159
++ +LL+ + +V + DLA Q+ EM+ + P+ ++ +L++ + K E T LL
Sbjct: 153 TALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL--EEATHLL 210
Query: 160 DTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
Y ++ +G D+ +Y +L+ C G V+ A L +++ +G+
Sbjct: 211 -----YSMFWRISQKGSGE--------DIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
+ Y+ + G H E E I ++ E RG P + S+S +
Sbjct: 258 KAPKRCYHHIEAG-------HWESSSE-GIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD-EMVRSGVSPCA 338
K + M+ +G PT Y + +K L G+L++A + + EM++ P
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
YN K + A+ KKM + C TY L+ + ++
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+M P ++ Y ++I GLC+ + EA + EM+ + +P+ ++ L
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 158/436 (36%), Gaps = 68/436 (15%)
Query: 82 ALSLFNYAKS-LPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
AL LF AK P+ + S + +ID + K + +I M + S S F +
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 141 IRRL---------VSDTKTTSE--------HFTVLLDTLCKYGYVKLAAEVFNGNKRHCR 183
IR +S K+ E F LL + K ++ A +F
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
N + +L+ C++ R + A EM +G P+ +Y +L+ G C E
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL------EG 201
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF------------ 291
+ E +F + ++G D+ + I+L A + +++
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 292 ----------------------RMMKE---QGICPTVATYTSVIKCLASCGRLEDAEGLF 326
R++ E +G P + +Y+++ L G+L + E +
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL- 385
M G P Y K A+ + K G C PT Y VL++
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD 381
Query: 386 ---KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
+ +G +K++ K+ + + Y L+ GLC ++ EA Q EM+ K P
Sbjct: 382 DGKSMEAVGYLKKM---SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 443 QKVTFETLYRGLIQSD 458
T+ + +GL D
Sbjct: 439 GVETYHMMIKGLCDMD 454
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
L+ LCK G + A ++F+G DV +T +I G+ KLG + A+ + + R
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER-----DVVTWTHVITGYIKLGDMREARELFDRVDSR 106
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHV 277
NVVT+ +++G R L A+ +F EM ER +V S++ ++
Sbjct: 107 ---KNVVTWTAMVSGYLRSKQLSI----------AEMLFQEMPER----NVVSWNTMIDG 149
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
Y+++ + +L+ F M E+ I ++ S++K L GR+++A LF+ M R V
Sbjct: 150 YAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDV--- 202
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
V++ D A +LF M E + S A G + + + I +++
Sbjct: 203 -VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG-----YAQNNRIDEADQLF 256
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+ M E D + +I G ++ +AC F M EK +++ T+ G +++
Sbjct: 257 QVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVEN 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 153/379 (40%), Gaps = 74/379 (19%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
P + S++ +ID A+ + D A +L EM +R++ S L++R
Sbjct: 136 PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQR----------- 184
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
G + A +F R DV +T ++ G K G+V+ A+ + M
Sbjct: 185 -----------GRIDEAMNLFERMPRR-----DVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
ER N++++N ++ G + I +AD++F M ER D S++ +
Sbjct: 229 PER----NIISWNAMITGYAQN----------NRIDEADQLFQVMPER----DFASWNTM 270
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG- 333
+ + R + + F M E+ V ++T++I E+A +F +M+R G
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAH-----TYGVLLQMFLKA- 387
V P TY L + + L S + H LL M+ K+
Sbjct: 327 VKPNVGTYVSILSA------CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 388 DMIGVVKEIWRDMKESGVGPDLDL--YTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
++I R M ++G+ DL + +I +EA + + +M + GF P V
Sbjct: 381 ELIAA-----RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 446 TFETL-----YRGLIQSDM 459
T+ L + GL++ M
Sbjct: 436 TYLNLLFACSHAGLVEKGM 454
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 147/362 (40%), Gaps = 33/362 (9%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR-RLVSDTKTTSE 153
P + S++ +I A+ + D A QL M +R + IR R ++ +
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 154 HF---TVLLDTLCKYGYVK-----LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL-GRV 204
V+ T GYV+ A VF+ R P+V Y ++ L G V
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 205 ETAQSFLNEMVERGI-EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
E Q +++++ + + + N + + LLN + L A K+FD G
Sbjct: 349 EGQQ--IHQLISKSVHQKNEIVTSALLNMYSKSGELIA----------ARKMFDN----G 392
Query: 264 I--EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+ + D+ S++ ++ VY+ + +++ + M++ G P+ TY +++ + G +E
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
F ++VR P + + GR + F + L + YG +L
Sbjct: 453 GMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARL---SRSFYGAIL 509
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
+ + + KE+ + + E+G D Y L+ + K EA + ++M EKG
Sbjct: 510 SACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
Query: 442 PQ 443
Q
Sbjct: 569 KQ 570
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 129/308 (41%), Gaps = 12/308 (3%)
Query: 153 EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLN 212
E +T L+ + G A + K PDV Y++LI + ++ + Q L+
Sbjct: 186 EVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLS 245
Query: 213 EMVERGIEPNVVTYNVLLNGVCR-KVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
+M +GI PN +TYN L++ + K+ + E + + + D +PD +
Sbjct: 246 DMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDD----------CKPDSWTM 295
Query: 272 SIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR 331
+ L + + ++ + + + GI P + T+ ++ G + + + M +
Sbjct: 296 NSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK 355
Query: 332 SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG 391
S VTYN + D LF+ M+ + + P+ T L++ + +A
Sbjct: 356 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIF-PSCVTLCSLVRAYGRASKAD 414
Query: 392 VVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLY 451
+ + R ++ S + DL + L+ +K+ E M +KGF P K+T+ T+
Sbjct: 415 KIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMV 474
Query: 452 RGLIQSDM 459
+ S M
Sbjct: 475 KAYRISGM 482
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQ-GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
LH A + + ++ F +++EQ P V Y +I L C + E A LF EM+ G
Sbjct: 121 LHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEG 180
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
Y Y D+A L ++MK C P HTY +L++ FL+ V
Sbjct: 181 CVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKV 240
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
+++ DM+ G+ P+ Y LI + K + E ++M+
Sbjct: 241 QDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQML 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 134/315 (42%), Gaps = 29/315 (9%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A +L KS N ++ +LI + +V FD L+++M ++ + PN T+ LI
Sbjct: 204 AFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI 263
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
D ++ F + TL +++ E C+ PD + +
Sbjct: 264 -----DAYGKAKMFVEMESTL-----IQMLGE------DDCK--PDSWTMNSTLRAFGGN 305
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRE 261
G++E ++ + GIEPN+ T+N+LL+ + + + V + M++
Sbjct: 306 GQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNY----------KKMSAVMEYMQK 355
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+ ++++V+ + RA + FR+M+ + I P+ T S+++ + +
Sbjct: 356 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
G+ + S + V +NC Y GR + + +K ++ E P TY ++
Sbjct: 416 IGGVLRFIENSDIRLDLVFFNCLVDAY-GRMEKFAEMKGVLELMEKKGFKPDKITYRTMV 474
Query: 382 QMFLKADMIGVVKEI 396
+ + + M VKE+
Sbjct: 475 KAYRISGMTTHVKEL 489
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 150/376 (39%), Gaps = 51/376 (13%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
++ ++ + K D + ++TEM R ++PN T L
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKT------------------MNAALCF 401
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
CK G+V A E++ ++ F P Y LI+ C VE A L ++RG
Sbjct: 402 FCKAGFVDEALELYR-SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFL 460
Query: 222 NVVTYNVLLNGVC--------RKVSLHPEER-----------FERTIRDADKVFDEM--- 259
T++ L N +C R++ + ER + D KV D +
Sbjct: 461 GGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMIN 520
Query: 260 ---RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASC 316
+ G++ F+ +++ + ++ M+E+G PT + Y +VI+C+ C
Sbjct: 521 ELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCV--C 578
Query: 317 GRLEDAEGLFDEMVRSGVSPC---AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPT 373
+ F +++ +S YN F + A ++ M DG+ +PT
Sbjct: 579 EMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGI-TPT 637
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
+ ++LQ +LK + I + D++E G LY ++I GLC+ K +A F
Sbjct: 638 VASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLE 696
Query: 434 EMIEKGFLPQKVTFET 449
EM +G P +E
Sbjct: 697 EMKGEGLQPSIECYEV 712
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 151/392 (38%), Gaps = 59/392 (15%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
L +F L + + + D+A +L+ +R L P + ++ K S
Sbjct: 460 LGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLP----------KRIAGCKIIS---- 505
Query: 157 VLLDTLCKYGYVK---LAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNE 213
LC G V+ + E+FN + F KM+T LIYG L R + A +
Sbjct: 506 ----ALCDVGKVEDALMINELFNKSGVDTSF----KMFTSLIYGSITLMRGDIAAKLIIR 557
Query: 214 MVERGIEPNVVTYNVLLNGVCR---------------KVSL--HPEERFERTIRDAD--- 253
M E+G P Y ++ VC ++SL H + + I A
Sbjct: 558 MQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAG 617
Query: 254 ------KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
V+D M GI P V S ++L Y + K +L F ++EQG Y
Sbjct: 618 KPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQ 676
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKED 367
+I L +L+DA +EM G+ P Y ++ + D A+ L + ++
Sbjct: 677 VMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKS 736
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK--ESGVGPDLDLYTLLIHGLCERKKW 425
G TA VLL +K+ V E W M+ E + P++ LI R
Sbjct: 737 GR-RITAFIGNVLLHNAMKSKG---VYEAWTRMRNIEDKI-PEMKSLGELIGLFSGRIDM 791
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+ E+IEK + T+ L R ++ +
Sbjct: 792 EVELKRLDEVIEKCYPLDMYTYNMLLRMIVMN 823
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 127/319 (39%), Gaps = 27/319 (8%)
Query: 144 LVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
L +D +L+D LC + A ++ + K N D + Y + I K G
Sbjct: 278 LPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMD-RAYNIWIRALIKAGF 336
Query: 204 VETAQSFLNEMVE-RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD---EM 259
+ FL ++ G E V YN ++ + ++ +L D V+D EM
Sbjct: 337 LNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNL-------------DGVYDILTEM 383
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRL 319
RG+ P+ + + L + +A +L+ +R E G PT +Y +I L + +
Sbjct: 384 MVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESV 443
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
E A + + G T++ + D A +L E L +
Sbjct: 444 EQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI 503
Query: 380 LLQM--FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
+ + K + ++ E++ +SGV ++T LI+G + A + + M E
Sbjct: 504 ISALCDVGKVEDALMINELF---NKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQE 560
Query: 438 KGFLPQKVTFETLYRGLIQ 456
KG+ P + +LYR +IQ
Sbjct: 561 KGYTPTR----SLYRNVIQ 575
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 114/295 (38%), Gaps = 12/295 (4%)
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFER 247
+++ L+ G+ GR + A M RG++ + Y+VLLN + E+
Sbjct: 182 LRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVE----------EK 231
Query: 248 TIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
D +FD++ RG VT SI++ + + K + D R + +
Sbjct: 232 CFDSFDVIFDQISVRGFVCAVTH-SILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLG 290
Query: 308 SVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKED 367
++ L S + ++A L DE+ G YN + + ++ +K+
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
C Y ++ LK + + V +I +M GV P+ + C+ E
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEESISFGSEF 481
A + + E GF P +++ L L ++ + + + LK +D G F
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTF 465
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 161/433 (37%), Gaps = 84/433 (19%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI------------RRLV--- 145
+F LI ++R+ ++A ++ EM + PN T VLI R+L+
Sbjct: 199 TFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKEL 258
Query: 146 -------SDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNK----------------RHC 182
+DT + F L+D++C+ GY E+ C
Sbjct: 259 WEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLC 318
Query: 183 RF------------------NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
R+ P Y +I+G CK G A L E E P+
Sbjct: 319 RYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEY 378
Query: 225 TYNVLLNGVCRKVSLHPEER-FERTIR--DADK----------------------VFDEM 259
TY +L+ +C+++ E +R AD+ V M
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSM 438
Query: 260 RERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC-PTVATYTSVIKCLASCGR 318
+ PD + + V++ + + ++ M C P T +V+ L + GR
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 319 LEDAEGLFDE-MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
E+A + + M + + P V YN + D A+ +F ++++ + + + TY
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADST-TY 557
Query: 378 GVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIE 437
+++ + + + K+ W D+ D +Y + GLC+ +AC F ++ +
Sbjct: 558 AIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Query: 438 KGFLPQKVTFETL 450
G +P V + T+
Sbjct: 618 SGAIPNVVCYNTV 630
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 24/334 (7%)
Query: 133 NPSTFLVLIRRLVSDTKT---TSEHFTVLLDTLCK-YGYVKLAAEVFN-GNKRHCRFNPD 187
+P + L +I RL+ K + ++ L++ LC Y + VF+ N+ H PD
Sbjct: 140 SPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHL---PD 196
Query: 188 VKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFER 247
V +T LI G+C++ +E A +EM GI PN +T +VL+ G + R
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKM----------R 246
Query: 248 TIRDADKVFDEMRERGIEPDVTSF--SIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA- 304
+ K+ E+ E TS + ++ + D F + + +C +V
Sbjct: 247 DVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNV 306
Query: 305 --TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFK 362
Y +I L R A + M G+ P +YN A +L +
Sbjct: 307 EFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLE 366
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCER 422
+ E P+ +TY +L++ K G + + M +Y + + GLC
Sbjct: 367 EGSEFEF-FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVM 425
Query: 423 KKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
E V M++ P + T T+ GL +
Sbjct: 426 DNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 37/178 (20%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
+++ +I + K+ + D A + ++++ S+T + +T+ ++I D
Sbjct: 521 AYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIII------------------D 562
Query: 161 TLCKYGYVKLAAEVFNG----NKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
LC V +A + ++ + RH D +Y + G C+ G + A FL ++ +
Sbjct: 563 GLCVTNKVDMAKKFWDDVIWPSGRH-----DAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
G PNVV YN ++ C + L R+A ++ +EMR+ G PD ++ I+
Sbjct: 618 SGAIPNVVCYNTVI-AECSRSGLK---------REAYQILEEMRKNGQAPDAVTWRIL 665
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Query: 297 QGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADS 356
+G P +SVI L GR ++A F + SG P T N + S
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVS 143
Query: 357 ALKLFKKM---KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYT 413
L + ++ K++ + P+ Y L+ + ++ DM+ G PD+ +T
Sbjct: 144 TLGVIHRLIGFKKEFV--PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFT 201
Query: 414 LLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 472
LI G CE ++ A + F EM G P +T L G ++ + T R+L K+L E
Sbjct: 202 TLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 52/287 (18%)
Query: 174 VFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG------IEPNVVTYN 227
VF K RF D Y + I+G+ G ++ A S EM ER P++ TYN
Sbjct: 234 VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 228 VLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLS 287
L++ +C F + +DA V+DE++ G EPD +++ I++
Sbjct: 294 SLIHVLCL---------FGKA-KDALIVWDELKVSGHEPDNSTYRILI------------ 331
Query: 288 LDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE 347
QG C + R++DA ++ EM +G P + YNC
Sbjct: 332 ---------QGCCKSY--------------RMDDAMRIYGEMQYNGFVPDTIVYNCLLDG 368
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
+ A +LF+KM ++G+ + TY +L+ + ++ D+K+ G
Sbjct: 369 TLKARKVTEACQLFEKMVQEGV-RASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFV 427
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGL 454
D ++++ LC K A + EM +GF VT +L G
Sbjct: 428 DAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 186/463 (40%), Gaps = 81/463 (17%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
A+S + AK+ P P L + LL+ +++K L+ +D S+ + L ++
Sbjct: 12 AISGLSPAKNSPFPQLCNV---LLVASLSKT----LSQSGTRSLDANSIPISEPVVLQIL 64
Query: 142 RRLVSDT-----------------KTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRF 184
RR D K ++ ++ + T+C+ G + ++ G+ +
Sbjct: 65 RRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLL-GSMKEDGV 123
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSL----- 239
N D M +L+ + G+ E+A L+ M E G N Y+ +L + +K L
Sbjct: 124 NLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALS 183
Query: 240 -----------HPEERFERTI------------------RDAD------KVFDEMRE-RG 263
H ++ R I R AD +VF++++ +
Sbjct: 184 ILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR 243
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG------ICPTVATYTSVIKCLASCG 317
+ D S++I +H + +L F+ MKE+ P + TY S+I L G
Sbjct: 244 FKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFG 303
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFF----KEYRGRKDADSALKLFKKMKEDGLCSPT 373
+ +DA ++DE+ SG P TY K YR D A++++ +M+ +G P
Sbjct: 304 KAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYR----MDDAMRIYGEMQYNGFV-PD 358
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFV 433
Y LL LKA + +++ M + GV Y +LI GL + F
Sbjct: 359 TIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFC 418
Query: 434 EMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIS 476
++ +KG +TF + L + L +L ++++ S
Sbjct: 419 DLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 148 TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGN-KRHCRFNPDVKMYTVLIYGWCKLGRVET 206
T TS + ++ + K GY + A V + + C D+ Y V+I G K+GR +
Sbjct: 626 TDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCA--ADIATYNVIIQGLGKMGRADL 683
Query: 207 AQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP 266
A + L+ + ++G ++V YN L+N + + L +A ++FD M+ GI P
Sbjct: 684 ASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD----------EATQLFDHMKSNGINP 733
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYT 307
DV S++ ++ V S+A K + + + M + G P T T
Sbjct: 734 DVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDT 774
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 23/269 (8%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+++ I D A L EM +RS S D T + L+
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSS--------FGPDICT----YNSLIH 297
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIE 220
LC +G K A V++ K PD Y +LI G CK R++ A EM G
Sbjct: 298 VLCLFGKAKDALIVWDELKVSGH-EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV 356
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
P+ + YN LL+G + R + +A ++F++M + G+ +++I++ R
Sbjct: 357 PDTIVYNCLLDGTLKA----------RKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
+ + F +K++G T++ V L G+LE A L +EM G S VT
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGL 369
+ + + D KL K ++E L
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNL 495
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 267 DVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP-TVATYTSVIKCLASCGRLEDAEGL 325
DV + L +Y L+ F + G+ T TY S++ G + A G+
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 326 FDEMVRSGVSPCAVTYNCFFKEY--RGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
D+M + + TYN + GR D SA+ L + K+ G Y L+
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAV-LDRLTKQGGYLDIV--MYNTLINA 709
Query: 384 FLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ 443
KA + +++ MK +G+ PD+ Y +I + K +EA ++ M++ G LP
Sbjct: 710 LGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Query: 444 KVT 446
VT
Sbjct: 770 HVT 772
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
TYN +++ +K + A V D+M E D+ ++++++ + +
Sbjct: 632 TYNSMMSSFVKK----------GYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRA 681
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
L+ + +QG + Y ++I L RL++A LFD M +G++P V+YN
Sbjct: 682 DLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTM 741
Query: 345 FKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVL 380
+ A K K M + G C P T +L
Sbjct: 742 IEVNSKAGKLKEAYKYLKAMLDAG-CLPNHVTDTIL 776
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 13/276 (4%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
D K+YT LI K G+V+ ++M G+E N+ T+ L++G R
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARA---------- 550
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQG--ICPTVA 304
+ A + +R + ++PD F+ ++ ++ + D MK + I P
Sbjct: 551 GQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
+ +++K + G++E A+ ++ + + G+ Y D D A ++K M
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
KE + +P + L+ + A M+ I +D K G+ Y+ L+ C K
Sbjct: 671 KEKDV-TPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
W++A + + ++ P T L L + + L
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 118/292 (40%), Gaps = 14/292 (4%)
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT 248
K+Y + CK R +++ + P + T+N+L++ VC +
Sbjct: 436 KIYHASFFKACKKQRAVKEAFRFTKLI---LNPTMSTFNMLMS-VCAS---------SQD 482
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
I A V ++E G+ D ++ ++ +++ K + F M G+ + T+ +
Sbjct: 483 IEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGA 542
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK-ED 367
+I A G++ A G + + V P V +N D A + +MK E
Sbjct: 543 LIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAET 602
Query: 368 GLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
P + G L++ A + KE+++ + + G+ ++YT+ ++ + W
Sbjct: 603 HPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDF 662
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGS 479
AC + +M EK P +V F L + ML + + + I G+
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGT 714
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 32/289 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRR------------LVSDT 148
+F LID A+ Q A+ + +++ P+ F LI ++++
Sbjct: 539 TFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEM 598
Query: 149 KTTS-----EHFTV--LLDTLCKYGYVKLAAEVFNG-NKRHCRFNPDVKMYTVLIYGWCK 200
K + +H ++ L+ C G V+ A EV+ +K R P+V YT+ + K
Sbjct: 599 KAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV--YTIAVNSCSK 656
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMR 260
G + A S +M E+ + P+ V ++ L++ V+ H + + +A + + +
Sbjct: 657 SGDWDFACSIYKDMKEKDVTPDEVFFSALID-----VAGHA-----KMLDEAFGILQDAK 706
Query: 261 ERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+GI S+S ++ A + +L+ + +K + PT++T ++I L +L
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 321 DAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
A DE+ G+ P +TY+ + D + + KL + K DG+
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGV 815
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 151/397 (38%), Gaps = 68/397 (17%)
Query: 86 FNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV 145
F + K + NP +S +F++L+ A + + A ++ + + +T + + LI
Sbjct: 456 FRFTKLILNPTMS--TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCA 513
Query: 146 SDTKTTS-----------------EHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDV 188
K + F L+D + G V A + G R PD
Sbjct: 514 KSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY-GILRSKNVKPDR 572
Query: 189 KMYTVLIYGWCKLGRVETAQSFLNEMVERG--IEPNVVTYNVLLNGVCRKVSLHPEERFE 246
++ LI + G V+ A L EM I+P+ ++ L+ C + E
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA------GQVE 626
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
R A +V+ + + GI ++I ++ S++ + ++ MKE+ + P +
Sbjct: 627 R----AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
+++I L++A G+ + G+ ++Y+ KD AL+L++K+K
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 367 --------------DGLCS--------------------PTAHTYGVLLQMFLKADMIGV 392
LC P TY +L+ + D V
Sbjct: 743 IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEV 802
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
++ K GV P+L + I LC+R ++ +AC
Sbjct: 803 SFKLLSQAKGDGVSPNL-IMCRCITSLCKR-RFEKAC 837
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 5/204 (2%)
Query: 262 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLED 321
+G + D +++ +L ++ A + Q F +MKE+G+ TYTS+I ++S G ++
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 322 AEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLL 381
A L++EM +G P V+Y + K + A +++K+M + SP HTY VL+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRV-SPNCHTYTVLM 234
Query: 382 QMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFL 441
+ + +I+ M+E GV PD +LI + + + V M E G +
Sbjct: 235 EYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVV 294
Query: 442 PQKVTF----ETLYRGLIQSDMLR 461
+ F ETL D+LR
Sbjct: 295 LRYPIFVEALETLKAAGESDDLLR 318
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
I+ VF M+E+G+ D +++ ++H S + ++ + M++ G PTV +YT+
Sbjct: 138 IQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTA 197
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
+K L + GR+E+A ++ EM+RS VSP TY + + AL +F KM+E G
Sbjct: 198 YMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIG 257
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
+ P +L+ LK + + MKE+GV
Sbjct: 258 V-QPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 32/342 (9%)
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+T +LD + G ++ VF+ K D YT LI+ G V+ A EM
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVL-IDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
+ G EP VV+Y + L + R E +A +V+ EM + P+ +++++
Sbjct: 184 RDNGCEPTVVSYTAYMK------MLFADGRVE----EATEVYKEMLRSRVSPNCHTYTVL 233
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
+ K + +LD F M+E G+ P A +I G + M +GV
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKE----DGLCS------PTAHTYG------ 378
+ Y F + K A + L +++ + LCS PTA
Sbjct: 294 ---VLRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDD 350
Query: 379 --VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
V+ + L + V + M++ + D + + +I C+R + A F +
Sbjct: 351 SRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSL 410
Query: 437 EKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFG 478
E G +K + L ++S+ L + K++ + S G
Sbjct: 411 EMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLG 452
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
I DA KVFD MRER ++ ++S ++ YSR ++ + FR+M + G+ P +
Sbjct: 131 IADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPK 186
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDG 368
+++ A+CG +E + + +++ G+S C N Y + D A K F++M+E
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 369 LCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
+ + + +L + + E+ ++M++ G+ P L + +LI G + K A
Sbjct: 247 VIA-----WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 429 CQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
+M G T+ + GLI + M
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 128/317 (40%), Gaps = 60/317 (18%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
DV + ++ +C+ G+ E A + EM + GI P +VT+N+L+ G
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY------------- 292
Query: 247 RTIRDADKVFDEMRER---GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
+ D D M++ GI DV +++ ++ +LD FR M G+ P
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 304 ATYTSVI---KCL--------------------------------ASCGRLEDAEGLFDE 328
T S + CL + CG+LEDA +FD
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 329 MVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD 388
+ V T+N Y A +LF +M++ L P T+ ++ ++K
Sbjct: 413 VKNKDV----YTWNSMITGYCQAGYCGKAYELFTRMQDANL-RPNIITWNTMISGYIKNG 467
Query: 389 MIGVVKEIWRDMKESG-VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTF 447
G ++++ M++ G V + + L+I G + K EA + F +M F+P VT
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 448 ETLY---RGLIQSDMLR 461
+L L+ + M+R
Sbjct: 528 LSLLPACANLLGAKMVR 544
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ K G ++ A F M ER +V+ +N +L C+ H E A ++
Sbjct: 226 YAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQN-GKHEE---------AVELVK 271
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
EM + GI P + +++I++ Y++ K ++D + M+ GI V T+T++I L G
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
A +F +M +GV P AVT A SA K + + A
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTI----------MSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 378 GVLLQMFLKADMIGVVK-----EIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
G + + + ++ + E R + +S D+ + +I G C+ +A + F
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQS 457
M + P +T+ T+ G I++
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKN 466
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 123/294 (41%), Gaps = 26/294 (8%)
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER 244
P + +I + + G +E A E E+G +P VT ++L+N + + E
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 245 FERT-------------------------IRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
RT ++ A ++++ M G+ + +++ ++ VY
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
R + +++ F + G+ YT++I G++ +A LF EM + G+ P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
+YN K + +L + M+ +G C+ + TY L+Q++ ++ ++
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLS-TYLTLIQVYAESSQFAEAEKTITL 939
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+KE G+ ++ L+ L + EA + + +M E G P T+ +G
Sbjct: 940 VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 171 AAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLL 230
A E+F+ N R D K+YT +I + K G++ A S +EM ++GI+P +YN+++
Sbjct: 828 AIEIFS-NARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 231 NGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDK 290
+C LH E D++ M G D++++ ++ VY+ + + +
Sbjct: 887 K-ICATSRLHHE---------VDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKT 936
Query: 291 FRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRG 350
++KE+GI + + ++S++ L G +E+AE + +M +G+SP + K Y
Sbjct: 937 ITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMT 996
Query: 351 RKDADSALKLFKKM 364
DA+ + ++KM
Sbjct: 997 CGDAEKGILFYEKM 1010
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 173 EVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNG 232
+ F+ K + P V +YT+++ + ++G+++ A+ EM+E G EP+ V +L
Sbjct: 173 DFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCT 232
Query: 233 VCRKVSLHPEERFERTIRDA----------------------DKVFD---EMRERGIEPD 267
R F + +++ KV D EM E G+ P+
Sbjct: 233 YARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPN 292
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
++++V+ Y++ + +L F MK G P TY+SVI G E A GL++
Sbjct: 293 EFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYE 352
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
+M G+ P T Y ++ AL LF M+ + +
Sbjct: 353 DMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKI 394
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 289 DKFRMMKEQ-GICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKE 347
D F MK Q P+V YT V++ G+++ AE F EM+ G P AV
Sbjct: 173 DFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCT 232
Query: 348 YRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGP 407
Y + L +K ++E + T+ Y +L K G V ++W +M E GV P
Sbjct: 233 YARWGRHSAMLTFYKAVQERRILLSTS-VYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPP 291
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ YTL++ ++ EA + F EM GF+P++VT+ ++
Sbjct: 292 NEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSV 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+ DA +F E E+G +P + SI+++ + K + + R E+ I Y +
Sbjct: 720 LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNT 779
Query: 309 VIKCLASCGRLEDAEGLFDEMVRSGVSPCAV-TYNCFFKEYRGRKDADSALKLFKKMKED 367
+IK + G+L+ A +++ M SGV PC++ TYN Y D A+++F +
Sbjct: 780 LIKAMLEAGKLQCASEIYERMHTSGV-PCSIQTYNTMISVYGRGLQLDKAIEIFSNARRS 838
Query: 368 GL----------------------------------CSPTAHTYGVLLQMFLKADMIGVV 393
GL P +Y +++++ + + V
Sbjct: 839 GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEV 898
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
E+ + M+ +G DL Y LI E ++ EA + + EKG F +L
Sbjct: 899 DELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSA 958
Query: 454 LIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
L+++ M+ R K+ E IS S + LK Y
Sbjct: 959 LVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGY 994
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 137/362 (37%), Gaps = 34/362 (9%)
Query: 76 KHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPS 135
+H K A L+ A P S +ID + + A+ L E ++ P
Sbjct: 683 QHKLKEAKRLYLAAGESKTP--GKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAV 740
Query: 136 TFLVLIRRLVSDTK-TTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVL 194
T +L+ L + K +EH + C ++L D Y L
Sbjct: 741 TISILVNALTNRGKHREAEHIS----RTCLEKNIEL----------------DTVGYNTL 780
Query: 195 IYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADK 254
I + G+++ A M G+ ++ TYN +++ R + L A +
Sbjct: 781 IKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK----------AIE 830
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
+F R G+ D ++ ++ Y + K +L F M+++GI P +Y ++K A
Sbjct: 831 IFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICA 890
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
+ + + L M R+G TY + Y A K +KE G+ +
Sbjct: 891 TSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI-PLSH 949
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVE 434
+ LL +KA M+ + + M E+G+ PD ++ G + F+ +
Sbjct: 950 SHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEK 1009
Query: 435 MI 436
MI
Sbjct: 1010 MI 1011
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 39/243 (16%)
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
E + A+ + D + G+ + + + ++ VY R HK + + + + P +
Sbjct: 648 EGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLK-EAKRLYLAAGESKTPGKSV 706
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT------------------------- 340
S+I CG LEDA GLF E G P AVT
Sbjct: 707 IRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCL 766
Query: 341 ----------YNCFFKEYRGRKDADSALKLFKKMKEDGL-CSPTAHTYGVLLQMFLKADM 389
YN K A +++++M G+ CS TY ++ ++ +
Sbjct: 767 EKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCS--IQTYNTMISVYGRGLQ 824
Query: 390 IGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFET 449
+ EI+ + + SG+ D +YT +I + K EA F EM +KG P ++
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM 884
Query: 450 LYR 452
+ +
Sbjct: 885 MVK 887
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 21/241 (8%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P+ YT+++ + K G E A EM G P VTY+ +++ +S+ + +
Sbjct: 291 PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVIS-----LSVKAGD-W 344
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVAT 305
E+ I ++++MR +GI P + + +L +Y + +L F M+ I
Sbjct: 345 EKAI----GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVI 400
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
+I+ G DA+ +F+E R + TY + + + AL + + MK
Sbjct: 401 RGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMK 460
Query: 366 EDGLCSPTAH-TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD-------LDLYTLLIH 417
+ P + Y V+LQ + K + +E +R + ++G+ PD L+LYT L
Sbjct: 461 TRDI--PLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNL 517
Query: 418 G 418
G
Sbjct: 518 G 518
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 87/232 (37%), Gaps = 50/232 (21%)
Query: 221 PNVVTYNVLLN--GVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
P+VV Y ++L G K+ + A++ F EM E G EPD + +L Y
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKM------------AEETFLEMLEVGCEPDAVACGTMLCTY 233
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCA 338
+R + L ++ ++E+ I + + Y ++ L L+ EMV GV P
Sbjct: 234 ARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNE 293
Query: 339 VTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR 398
TY Y + + ALK F +MK G P TY ++ + +KA
Sbjct: 294 FTYTLVVSSYAKQGFKEEALKAFGEMKSLGFV-PEEVTYSSVISLSVKAG---------- 342
Query: 399 DMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
W +A + +M +G +P T T+
Sbjct: 343 -------------------------DWEKAIGLYEDMRSQGIVPSNYTCATM 369
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
Query: 255 VFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
V + R+ +V + IVL + ++A+ +L R E +C Y VI+ A
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G L A+ L EM G+ P +TY Y D A +L K+M + C +
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHD-CVLNS 235
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDM-KESGVG---PDLDLYTLLIHGLCERKKWREACQ 430
TY +L+ K+ + E+ +M KE G G P+ YTL+I CE+++ EA
Sbjct: 236 VTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALL 295
Query: 431 FFVEMIEKGFLPQKVTFETLYRGLIQSD 458
M +G +P +VT L +G++++D
Sbjct: 296 VLDRMGNRGCMPNRVTACVLIQGVLEND 323
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 34/268 (12%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PDV YT +I G+C G+++ A EM + N VTY+ +L GVC+ +
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDM------ 251
Query: 246 ERTIRDADKVFDEM-RERG---IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
ER + ++ EM +E G I P+ ++++V+ + + + +L M +G P
Sbjct: 252 ERAL----ELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 302 TVATYTSVIKCLASCGRLEDAEG------LFDEMVRSG---VSPCAVTYNCFFKEYRGRK 352
T +I+ G LE+ E L D++V+ G +S C + + +
Sbjct: 308 NRVTACVLIQ-----GVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWE 362
Query: 353 DADSA--LKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLD 410
+A+ L L + ++ DGL LL+ +L D + +EI + +S + D D
Sbjct: 363 EAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYL--DCFLLYQEIEKKDVKSTI--DSD 418
Query: 411 LYTLLIHGLCERKKWREACQFFVEMIEK 438
++ +L+ GLC++ EA + M++K
Sbjct: 419 IHAVLLLGLCQQGNSWEAAKLAKSMLDK 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 57/246 (23%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR------------RLVS-- 146
+++L+I A ++A LI EMD L P+ T+ +I RL
Sbjct: 167 AYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEM 226
Query: 147 ---DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRH---CRFNPDVKMYTVLIYGWCK 200
D S ++ +L+ +CK G ++ A E+ ++ +P+ YT++I +C+
Sbjct: 227 SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCE 286
Query: 201 LGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRK------------------------ 236
RVE A L+ M RG PN VT VL+ GV
Sbjct: 287 KRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSE 346
Query: 237 ------VSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDK 290
VSL +R+E +A+K+F M RG+ PD + S HV+ + LD
Sbjct: 347 CFSSATVSLIRMKRWE----EAEKIFRLMLVRGVRPDGLACS---HVFRELCLLERYLDC 399
Query: 291 FRMMKE 296
F + +E
Sbjct: 400 FLLYQE 405
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 116/302 (38%), Gaps = 57/302 (18%)
Query: 161 TLCKYGYVKLAAEVFNGNKRHCRFN--PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERG 218
TLC LA E ++ FN D Y ++I + G + A + EM G
Sbjct: 138 TLCNQA--NLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVG 195
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
+ P+V+TY ++NG C I DA ++ EM + + ++S +L
Sbjct: 196 LYPDVITYTSMINGYCNA----------GKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245
Query: 279 SRAHKPQLSLDKF-RMMKEQG---ICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV 334
++ + +L+ M KE G I P TYT VI+ R+E+A + D M G
Sbjct: 246 CKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRG- 304
Query: 335 SPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLK--ADMIGV 392
C P T VL+Q L+ D+ +
Sbjct: 305 -----------------------------------CMPNRVTACVLIQGVLENDEDVKAL 329
Query: 393 VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
K I + +K GV + ++ L K+W EA + F M+ +G P + ++R
Sbjct: 330 SKLIDKLVKLGGVSLS-ECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFR 388
Query: 453 GL 454
L
Sbjct: 389 EL 390
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 21/285 (7%)
Query: 185 NPDVKMYT---VLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
NP +K T LI + + + A EM + G VV++N LL C LH
Sbjct: 96 NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALL-AAC----LH- 149
Query: 242 EERFERTIRDADKVFDEMRER--GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGI 299
+ FER ++FDE +R I PD S+ +++ Y + KP+ +++ R M+ +G+
Sbjct: 150 SDLFER----VPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGV 205
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
T+ +T+++ L G +++AE L+ EMV G YN ++ + +
Sbjct: 206 EVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN-AAKESPERVKE 264
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGL 419
L ++M GL P +Y L+ + M+ K+++ +++ P+ + LI L
Sbjct: 265 LMEEMSSVGL-KPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHL 319
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWR 464
C + + F + +P T + L GL++++ + R
Sbjct: 320 CINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDAR 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 145/382 (37%), Gaps = 93/382 (24%)
Query: 94 NPPLSHSSF-HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTS 152
NP + +F LI + + FD A ++ EMD+ TP R +VS
Sbjct: 96 NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLG-TP---------RTVVS------ 139
Query: 153 EHFTVLLDTLCKYGYVKLAAEVFNG-NKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFL 211
F LL + ++F+ +R+ PD Y +LI +C G+ E A +
Sbjct: 140 --FNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIM 197
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
+M +G+E ++ + +L G K L + +A+ ++ EM +G + D T +
Sbjct: 198 RDMEVKGVEVTIIAFTTIL-GSLYKNGL---------VDEAESLWIEMVNKGCDLDNTVY 247
Query: 272 SIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR 331
++ R+M P E + L +EM
Sbjct: 248 NV------------------RLMNAAKESP------------------ERVKELMEEMSS 271
Query: 332 SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG 391
G+ P V+YN Y + A K++ +GL P A T+ L+ + G
Sbjct: 272 VGLKPDTVSYNYLMTAYCVKGMMSEAKKVY-----EGLEQPNAATFRTLIFHLC---ING 323
Query: 392 VVKEIWRDMKESGVG---PDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
+ + K+S + PD L GL + + +A + +++K F P+ VT
Sbjct: 324 LYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA-RGVARIVKKKFPPRLVT-- 380
Query: 449 TLYRGLIQSDMLRTWRRLKKKL 470
W++L++KL
Sbjct: 381 -------------EWKKLEEKL 389
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCK 164
+I K F+ A ++ EM R D K + F LL
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNR------------------DCKRSVLSFNALLSAYRL 156
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
+ E+FN PD+ Y LI C+ + A + L+E+ +G++P++V
Sbjct: 157 SKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIV 216
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
T+N LL +S + + +FE ++++ +M E+ + D+ +++ L + K
Sbjct: 217 TFNTLL------LSSYLKGQFEL----GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKS 266
Query: 285 QLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCF 344
+ ++ F +K G+ P V ++ ++I+ + G++++AE + E+V+ G P T+
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 345 FKEYRGRKDADSALKLFKK 363
D +SA++LFK+
Sbjct: 327 LPAMCKAGDFESAIELFKE 345
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GICPTVATYTSV 309
+A KVF+EM R + V SF+ +L Y + K + + F + + I P + +Y ++
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 310 IKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
IK L L +A L DE+ G+ P VT+N + + +++ KM E +
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 370 CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
LL + +A +V ++ ++K SG+ PD+ + +I G K EA
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVN-LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 430 QFFVEMIEKGFLPQKVTFETL 450
++ E+++ G+ P K TF L
Sbjct: 306 AWYKEIVKHGYRPDKATFALL 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 117/264 (44%), Gaps = 12/264 (4%)
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
+I + K G E AQ EM R + +V+++N LL+ R + +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY----------RLSKKFDVVE 164
Query: 254 KVFDEMRER-GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
++F+E+ + I+PD+ S++ ++ ++ ++ +G+ P + T+ +++
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
G+ E E ++ +MV V+ TYN + + LF ++K GL P
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGL-KP 283
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
++ +++ + + + ++++ + G PD + LL+ +C+ + A + F
Sbjct: 284 DVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQ 456
E K +L + T + L L++
Sbjct: 344 KETFSKRYLVGQTTLQQLVDELVK 367
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 15/175 (8%)
Query: 284 PQLSLDKFRMMKE-QGICPTVATYTSVIKCLASCGRLEDAEGLFDE------MVRSGVSP 336
P+ ++KF+ E + +A Y ++ L + RL E + +E M + G +
Sbjct: 54 PKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAA 113
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
++ Y ++A K+F++M C + ++ LL + + VV+E+
Sbjct: 114 RIISL------YGKAGMFENAQKVFEEMPNRD-CKRSVLSFNALLSAYRLSKKFDVVEEL 166
Query: 397 WRDM-KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+ ++ + + PD+ Y LI LCE+ EA E+ KG P VTF TL
Sbjct: 167 FNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTL 221
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHV 277
GIEP++ TYN ++ +C S + + EM + I+P SF +++
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTS----------SSYSIVAEMERKWIKPTAASFGLMIDG 226
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
+ + K RMM E G+ VATY +I+CL + +A+ L D ++ + P
Sbjct: 227 FYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPN 286
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIW 397
+VTY+ + ++ D A+ LF+ M +G P + Y L+ K +
Sbjct: 287 SVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY-KPDSECYFTLIHCLCKGGDFETALILC 345
Query: 398 RDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
R+ E P + L++GL R K EA + + EK
Sbjct: 346 RESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 233 VCRKVSLHPEERFERTIRDA--------------DKVFDEMRERGIEPDVTSFSI-VLHV 277
+CR SL P+ +R I ++ D + +P SF++ + +
Sbjct: 61 ICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIIL 120
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRS-GVSP 336
Y RA+ S+ FR +++ I TV + +++ ++A ++ EM + G+ P
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
TYN + S+ + +M+ + PTA ++G+++ F K + V+++
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWI-KPTAASFGLMIDGFYKEEKFDEVRKV 239
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
R M E GV + Y ++I LC+RKK EA ++ P VT+ L G
Sbjct: 240 MRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCS 299
Query: 457 SDML 460
+ L
Sbjct: 300 EENL 303
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 127/296 (42%), Gaps = 45/296 (15%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVL------ 158
L+D A R+ D AW +I M +R + T+ L+ R ++ +V+
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRF-NELGKHEMALSVINYMYGD 522
Query: 159 ---LDTLCKYGYVKLAAEVF---NGNKRHC-----RFNPDVKMYTVLIYGWCKLGRVETA 207
+D L G++ +A + G HC F+ + L+ + K G +E A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
+ E+ P+VV++N L++G+ I A F+EMR + EPD
Sbjct: 583 KKVFEEIAT----PDVVSWNGLVSGLASN----------GFISSALSAFEEMRMKETEPD 628
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKE-QGICPTVATYTSVIKCLASCGRLEDAEGLF 326
+F I+L S L L+ F++MK+ I P V Y ++ L GRLE+A G+
Sbjct: 629 SVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVV 688
Query: 327 DEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC-SPTAHTYGVLL 381
+ M + P A+ + + R R + L L + M GL +P+ +LL
Sbjct: 689 ETM---HLKPNAMIFKTLLRACRYRGN----LSLGEDMANKGLALAPSDPALYILL 737
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 154/384 (40%), Gaps = 46/384 (11%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLV-------------SD 147
++ ++I K ++F A L EM PN TF ++R S
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 148 TKTTSEHFTV----LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
KT E +V L D K G K A E+F+ + N D +T++I +
Sbjct: 151 IKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-----NADTISWTMMISSLVGARK 205
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
A F +EMV+ G+ PN T+ LL G + L F +TI V RG
Sbjct: 206 WREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLE----FGKTIHSNIIV------RG 254
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
I +V + ++ YS+ K + D R++ G V +TSV+ R ++A
Sbjct: 255 IPLNVVLKTSLVDFYSQFSKME---DAVRVLNSSGE-QDVFLWTSVVSGFVRNLRAKEAV 310
Query: 324 GLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
G F EM G+ P TY+ + D ++ + + G T L+ M
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST-DVGNALVDM 369
Query: 384 FLKADMIGV-VKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP 442
++K V ++ M V P++ +T LI GL + ++ +EM+++ P
Sbjct: 370 YMKCSASEVEASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 443 QKVTFETLYRGLIQSDMLRTWRRL 466
VT + R + LR RR+
Sbjct: 426 NVVTLSGVLRACSK---LRHVRRV 446
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 19/266 (7%)
Query: 185 NPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEER 244
+P+V +T LI G G V+ L EMV+R +EPNVVT L+GV R S
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT----LSGVLRACSKL---- 440
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
R +R ++ + R ++ ++ + ++ Y+ + K + + R MK +
Sbjct: 441 --RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNI 494
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
TYTS++ G+ E A + + M G+ ++ F ++ L
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYS 554
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
+ G S A L+ M+ K + K+++ ++ PD+ + L+ GL
Sbjct: 555 VKSGF-SGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASNGF 609
Query: 425 WREACQFFVEMIEKGFLPQKVTFETL 450
A F EM K P VTF L
Sbjct: 610 ISSALSAFEEMRMKETEPDSVTFLIL 635
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
TV +T +I A LF+EM+ SG P T++ + G +D ++
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCE 421
+ + G + L ++ K E++ ++ + D +T++I L
Sbjct: 148 GSVIKTGF-EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA----DTISWTMMISSLVG 202
Query: 422 RKKWREACQFFVEMIEKGFLPQKVTFETL 450
+KWREA QF+ EM++ G P + TF L
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKL 231
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 119/261 (45%), Gaps = 19/261 (7%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
D + T L+ +CK+G +E A+ + M E+ +VVT+N++++G + +
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQ----------Q 353
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
+ DA + MR ++ D + + ++ +R +L + +
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA 413
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
++V+ A CG + DA+ +FD V + + +N Y + AL+LF M+
Sbjct: 414 STVMDMYAKCGSIVDAKKVFDSTVEKDL----ILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
+G+ P T+ +++ L+ + K+++ M+ SG+ P+L +T +++G+ +
Sbjct: 470 EGV-PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Query: 427 EACQFFVEMIEKGFLPQKVTF 447
EA F +M E G P +
Sbjct: 529 EAILFLRKMQESGLRPNAFSI 549
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 35/251 (13%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T LL+ CK G ++ A VF+ F DV + ++I G+ + G VE A M
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDR-----MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFE-------------------------RTIR 250
++ + VT L++ R +L + + +I
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
DA KVFD +E D+ ++ +L Y+ + +L F M+ +G+ P V T+ +I
Sbjct: 428 DAKKVFDST----VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
L G++++A+ +F +M SG+ P +++ ++ A+ +KM+E GL
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL- 542
Query: 371 SPTAHTYGVLL 381
P A + V L
Sbjct: 543 RPNAFSITVAL 553
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 27/257 (10%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
P+V + ++I + G+V+ A+ +M GI PN++++ ++NG+ + F
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDK------FRMMKEQGI 299
R +M+E G+ P+ +FSI + + + AH L + + R ++ +
Sbjct: 534 LR----------KMQESGLRPN--AFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSL 581
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
V+ TS++ A CG + AE +F + S + P + N Y + A+
Sbjct: 582 ---VSIETSLVDMYAKCGDINKAEKVFGSKLYSEL-PLS---NAMISAYALYGNLKEAIA 634
Query: 360 LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM-KESGVGPDLDLYTLLIHG 418
L++ ++ GL P T +L A I EI+ D+ + + P L+ Y L++
Sbjct: 635 LYRSLEGVGL-KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDL 693
Query: 419 LCERKKWREACQFFVEM 435
L + +A + EM
Sbjct: 694 LASAGETEKALRLIEEM 710
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 162/390 (41%), Gaps = 56/390 (14%)
Query: 110 AKVRQ--FDLAWQLITEMDQRSLTPNPSTFLVLIRRL--VSDTKTTSEHFTVLLDTLCKY 165
A++RQ + QL ++Q + PN T+ ++ + V + EH+ + +D
Sbjct: 139 AQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFID----- 193
Query: 166 GYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVT 225
+ NP + + +L+ G +E A +M +G + V
Sbjct: 194 ---------------NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVV 238
Query: 226 YNVLLNGVCRKVSLHPEERFERTIRDAD---KVFDEMRER--GIEPDVTSFSIVLHVYSR 280
Y+ L+ G C K S DAD K++ E++E+ G D + ++ Y
Sbjct: 239 YSYLMMG-CVKNS------------DADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFM 285
Query: 281 AHKPQLSLDKFR--MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP-- 336
+ +++ + + + + + Y V++ L+ G+ ++A LFD + + P
Sbjct: 286 KEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRH 345
Query: 337 CAV---TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
AV T+N Y + A+++F++M D CSP ++ L+ +++
Sbjct: 346 LAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG-DFKCSPDTLSFNNLMNQLCDNELLAEA 404
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
++++ +M+E V PD Y LL+ + K E ++ M+E P + L
Sbjct: 405 EKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQ 464
Query: 454 LIQSDMLRTWRRL------KKKLDEESISF 477
LI++ L + K K+D+E+ F
Sbjct: 465 LIKAGKLDDAKSFFDMMVSKLKMDDEAYKF 494
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 301 PTVATYTSVIKCL---ASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSA 357
PT+ T +V+ A G L G ++ +G++P +TYN F+ Y + + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQ---AGIAPNIITYNLIFQAYLDVRKPEIA 184
Query: 358 LKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH 417
L+ +K ++ +P+ T+ +L++ + D + EI DM G D +Y+ L+
Sbjct: 185 LEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM 244
Query: 418 GLCERKKWREACQFFVEMIEK--GFLPQKVTFETLYRGLIQSDM 459
G + + + E+ EK GF+ V + L +G +M
Sbjct: 245 GCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEM 288
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
YT LI G + G + AQ EMV G+ P+++TYN+LL+G+C+ L + +
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE-KALVAGKVE 77
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
D +F + +G++P+V +++ ++ + + + + FR MKE G P TY ++I
Sbjct: 78 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYN 342
+ G + L EM + A TY
Sbjct: 138 RAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 213 EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD-ADKVFDEMRERGIEPDVTSF 271
EM +RG+ N VTY L+ G+ F+ D A ++F EM G+ PD+ ++
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGL-----------FQAGDCDMAQEIFKEMVSDGVPPDIMTY 54
Query: 272 SIVLHVYSRAHKPQLSL---------DKFRMMKEQGICPTVATYTSVIKCLASCGRLEDA 322
+I+L + K + +L D F + +G+ P V TYT++I G E+A
Sbjct: 55 NILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEA 114
Query: 323 EGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC--SPTAHTYGVL 380
LF +M G P + TYN + + D ++ +L K+M+ C + A TYG++
Sbjct: 115 YTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS---CRFAGDASTYGLV 171
Query: 381 LQMF 384
M
Sbjct: 172 TDML 175
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 33/165 (20%)
Query: 291 FRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRG 350
FR M ++G+ TYT++I+ L G + A+ +F EMV GV P +TYN
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILL----- 58
Query: 351 RKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWR---DMKESGVGP 407
DGLC KA + G V++ W + GV P
Sbjct: 59 ----------------DGLCKNGK---------LEKALVAGKVEDGWDLFCSLSLKGVKP 93
Query: 408 DLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYR 452
++ YT +I G C++ EA F +M E G LP T+ TL R
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
++F EM +RG+ + +++ ++ +A ++ + F+ M G+ P + TY ++ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 314 ASCGRL---------EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
G+L ED LF + GV P VTY + + + A LF+KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLL 415
KEDG P + TY L++ L+ E+ ++M+ D Y L+
Sbjct: 122 KEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 39/210 (18%)
Query: 120 QLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNK 179
+L EM QR L N T+ LI+ L + G +A E+F
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLF------------------QAGDCDMAQEIFK-EM 42
Query: 180 RHCRFNPDVKMYTVLIYGWCK---------LGRVETAQSFLNEMVERGIEPNVVTYNVLL 230
PD+ Y +L+ G CK G+VE + +G++PNVVTY ++
Sbjct: 43 VSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMI 102
Query: 231 NGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDK 290
+G C+K EE + +F +M+E G PD +++ ++ + R S +
Sbjct: 103 SGFCKKG--FKEEAY--------TLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 152
Query: 291 FRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+ M+ +TY V L GRL+
Sbjct: 153 IKEMRSCRFAGDASTYGLVTDMLHD-GRLD 181
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 358 LKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH 417
++LF++M + GL T TY L+Q +A + +EI+++M GV PD+ Y +L+
Sbjct: 1 MELFREMSQRGLVGNTV-TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 418 GLCERKKWREAC---------QFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKK 468
GLC+ K +A F + KG P VT+ T+ G + L +
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 469 KLDEES 474
K+ E+
Sbjct: 120 KMKEDG 125
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 6/202 (2%)
Query: 253 DKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
D V + R G F+ ++ VY+ A P+ L F M E P ++
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDV 163
Query: 313 LASC-GRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
L S G L+ A LF GV P +YN + + D A +LF KM E +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV- 222
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
P +Y +L+Q F + + E+ DM G PD LI GLC++ + E ++
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKY 278
Query: 432 FVEMIEKGFLPQKVTFETLYRG 453
EMI KGF P L +G
Sbjct: 279 LEEMISKGFSPHFSVSNCLVKG 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 81 IALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL 140
+A +F+YA PN S SS +LI + + R F+L ++ + F L
Sbjct: 66 LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125
Query: 141 IR-----RLVSDTKTT------------SEHFTVLLDTLCKY-GYVKLAAEVFNGNKRHC 182
I+ +L +T +H +LD L + GY++ A E+F ++ H
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG 185
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
P+ + Y +L+ +C + A +M+ER + P+V +Y +L+ G CRK
Sbjct: 186 VM-PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRK------ 238
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH--VYSRAHKPQLSLDKFRMMKEQGIC 300
+ A ++ D+M +G PD T + ++ K M +G
Sbjct: 239 ----GQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKK------YLEEMISKGFS 288
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
P + ++K S G++E+A + + ++++G
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 14/239 (5%)
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER-GIEPDVTSFSIVLHV 277
I+PN T+N ++ VS + E E ++++ EM E G P+V S+++++
Sbjct: 241 IKPNATTFNSMM------VSFYREGETEMV----ERIWREMEEEVGCSPNVYSYNVLMEA 290
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
Y + + MK +G+ + Y ++I L S + A+ LF +M G+
Sbjct: 291 YCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECT 350
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVK--E 395
+TY Y D DS L ++++MK G + ++ + D VV+ +
Sbjct: 351 CLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAAD 410
Query: 396 IWRD-MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
I +D ++E+ P + Y LL+ LCE K A EM+ KGF P + T+ G
Sbjct: 411 IVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
+ P A T+N + + + +++++M+E+ CSP ++Y VL++ + ++
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+++W +MK GV D+ Y +I GLC + +A + F +M KG +T+E L G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 454 LIQS----DMLRTWRRLKKK 469
++ L +R +K+K
Sbjct: 361 YCKAGDVDSGLVVYREMKRK 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 125/334 (37%), Gaps = 79/334 (23%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI-------------------- 141
F LLI + ++ D A ++ ++ R + ST LI
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 142 ----------RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMY 191
++++ K + F ++ + + G ++ ++ + +P+V Y
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 192 TVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD 251
VL+ +C G + A+ EM RG+ ++V YN ++ G+C FE +
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC--------SNFE--VVK 334
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKE--------------Q 297
A ++F +M +GIE ++ +++ Y +A L +R MK +
Sbjct: 335 AKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVE 394
Query: 298 GIC-------------------------PTVATYTSVIKCLASCGRLEDAEGLFDEMVRS 332
G+C P+ Y ++K L G+++ A + EMV
Sbjct: 395 GLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
G P TY F Y D +++ L +M E
Sbjct: 455 GFKPSQETYRAFIDGYGIVGDEETSALLAIEMAE 488
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 40/269 (14%)
Query: 190 MYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 249
++ +LI ++ A + ++ RGI + T N L+ V R+ + R +
Sbjct: 164 VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223
Query: 250 RDADKV-FDEMRER--GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GICPTVAT 305
D V DE ++ I+P+ T+F+ ++ + R + ++ +R M+E+ G P V +
Sbjct: 224 FGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y +++ + G + +AE +++EM GV V YN
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI-------------------- 323
Query: 366 EDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
GLCS +KA KE++RDM G+ Y L++G C+
Sbjct: 324 -GGLCSNFE---------VVKA------KELFRDMGLKGIECTCLTYEHLVNGYCKAGDV 367
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRGL 454
+ EM KGF +T E L GL
Sbjct: 368 DSGLVVYREMKRKGFEADGLTIEALVEGL 396
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 127/328 (38%), Gaps = 40/328 (12%)
Query: 147 DTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKR---HCRFNPDVKMYTVLIYGWCKLGR 203
D + +LL T C G V LA +++ KR D Y +I +
Sbjct: 330 DVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKM 389
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
+ A ++M G+ PN T++ L++ C L + A+ +F+EM G
Sbjct: 390 WKWALKVKDDMKSVGVTPNTHTWSSLISA-CANAGL---------VEQANHLFEEMLASG 439
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAE 323
EP+ F+I+LH A + + F+ K + ++ V K S +
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN 499
Query: 324 GLFDEMVRSGVSP------------CAVTYNCFFKE-----YRGRKDADSALKLFKKMKE 366
G + R+ SP TYN K YRG++ L +MK
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKE-------LMDEMKS 552
Query: 367 DGLCSPTAHTYGVLLQMFL-KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
GL SP T+ L+ M D+ G V+ I R M +G PD+ YT I E K
Sbjct: 553 LGL-SPNQITWSTLIDMCGGSGDVEGAVR-ILRTMHSAGTRPDVVAYTTAIKICAENKCL 610
Query: 426 REACQFFVEMIEKGFLPQKVTFETLYRG 453
+ A F EM P VT+ TL +
Sbjct: 611 KLAFSLFEEMRRYQIKPNWVTYNTLLKA 638
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
+P TYN+LL C +E + DEM+ G+ P+ ++S ++ +
Sbjct: 523 KPTTATYNILLKA-CGTDYYRGKE-----------LMDEMKSLGLSPNQITWSTLIDMCG 570
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
+ + ++ R M G P V YT+ IK A L+ A LF+EM R + P V
Sbjct: 571 GSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWV 630
Query: 340 TYNCFFK---EYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKE 395
TYN K +Y + L +++ M+ G P H L++ + + GV++E
Sbjct: 631 TYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGY-KPNDHFLKELIEEWCE----GVIQE 684
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 127/361 (35%), Gaps = 110/361 (30%)
Query: 213 EMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFS 272
++++ I+PN+ N L+N V+ H T+ KV+ M+ + D+TS++
Sbjct: 292 DLLKENIKPNIYVINSLMN-----VNSHD---LGYTL----KVYKNMQILDVTADMTSYN 339
Query: 273 IVLH-------------VYSRAHKPQ----LSLDKFRM---------------------- 293
I+L +Y A + + L LD F
Sbjct: 340 ILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDD 399
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
MK G+ P T++S+I A+ G +E A LF+EM+ SG P + +N
Sbjct: 400 MKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQ 459
Query: 354 ADSALKLFKK--------------------------MKEDGLCS---------------- 371
D A +LF+ +K +G S
Sbjct: 460 YDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKR 519
Query: 372 ----PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWRE 427
PT TY +LL+ G KE+ +MK G+ P+ ++ LI
Sbjct: 520 FCFKPTTATYNILLKACGTDYYRG--KELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEG 577
Query: 428 ACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLK 487
A + M G P V + T + ++ L+ + S E + YQ+K
Sbjct: 578 AVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKL-----------AFSLFEEMRRYQIK 626
Query: 488 P 488
P
Sbjct: 627 P 627
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 169/463 (36%), Gaps = 87/463 (18%)
Query: 76 KHHSKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPS 135
HHS +AL FN+A P S+H + +++ RQF L ++ + + S
Sbjct: 60 NHHS-LALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSS 118
Query: 136 TFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLI 195
+ LI LV K S F VL E F+ + +PDV L+
Sbjct: 119 VYRSLIDTLVLGRKAQSA-FWVL-------------EEAFSTGQ---EIHPDV--CNRLL 159
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR----- 250
G G + AQ +M +G+ N + + V + CR + R ++
Sbjct: 160 AGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLN 219
Query: 251 ---------------------DADKVFDEMRERGIEPDVTSFSIVLHVY---SRAHKPQL 286
DA + +E+R +PD ++ ++ + ++ Q+
Sbjct: 220 INGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQV 279
Query: 287 SLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD------------------- 327
L K R + G+ P + Y + I L S RL +A+ + +
Sbjct: 280 VLKKKRKL---GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIG 336
Query: 328 ---------------EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSP 372
MV +G P T + K +D +K ++ + G S
Sbjct: 337 SVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE 396
Query: 373 TAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFF 432
+Y +++ KA + ++MK+ G+ PD+ LY LI C+ + R A + +
Sbjct: 397 L-QSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 433 VEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 475
EM +G T+ L R L + RL K+ E I
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
++A FL MV G P + T + L +CR ++ + I K ++ + +G
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCR------HDKSDHLI----KAYELLSSKGY 393
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEG 324
++ S+S+++ +A + + S + MK++G+ P V+ Y ++I+ + A+
Sbjct: 394 FSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKK 453
Query: 325 LFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMF 384
L+DEM G TYN ++ +A+ +L+LF KM E G+ P Y L++
Sbjct: 454 LWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI-EPDETIYMSLIEGL 512
Query: 385 LKADMIGVVKEIWRDMKE 402
K I E++R E
Sbjct: 513 CKETKIEAAMEVFRKCME 530
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLD 160
S+ L+I + K + ++ + EM + L P+ S + L++
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLY------------------NALIE 440
Query: 161 TLCKYGYVKLAAEVFNGN-KRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGI 219
CK ++ A ++++ C+ N + Y VLI + G E + ++M+ERGI
Sbjct: 441 ACCKAEMIRPAKKLWDEMFVEGCKMN--LTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG---IEPDVTSFSIVLH 276
EP+ Y L+ G+C+ E I A +VF + ER + V S VL+
Sbjct: 499 EPDETIYMSLIEGLCK----------ETKIEAAMEVFRKCMERDHKTVTRRVLS-EFVLN 547
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLE 320
+ S H + S ++++E+ + ++KC+A +E
Sbjct: 548 LCSNGHSGEAS----QLLREREHLEHTGAHVVLLKCVADAKEVE 587
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 36/312 (11%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDT 161
F LL++ + +D A ++ T M PN + +++D
Sbjct: 111 FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPN------------------TRAMNMMMDV 152
Query: 162 LCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEP 221
K V A E+F G + F+ D+ + G G + + L M+ G P
Sbjct: 153 NFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRG--GRGDLVGVKIVLKRMIGEGFYP 210
Query: 222 NVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRA 281
N + +L CR + +A +V M GI V +S+++ + R+
Sbjct: 211 NRERFGQILRLCCRT----------GCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRS 260
Query: 282 HKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTY 341
+PQ ++D F M + G P + TYTS+IK G +++A + ++ G++P V
Sbjct: 261 GEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLC 320
Query: 342 NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMK 401
N Y + A K+F +++ L P +T+ +L + +V I
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLV-PDQYTFASILSSLCLSGKFDLVPRI----- 374
Query: 402 ESGVGPDLDLYT 413
G+G D DL T
Sbjct: 375 THGIGTDFDLVT 386
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 151/369 (40%), Gaps = 79/369 (21%)
Query: 138 LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
+VL R + E F +L C+ G V A +V G + V ++++L+ G
Sbjct: 198 IVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV-GLMICSGISVSVNVWSMLVSG 256
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ + G + A N+M++ G PN+VTY L+ G V L + +A V
Sbjct: 257 FFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGF---VDLG-------MVDEAFTVLS 306
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
+++ G+ PD+ ++++H Y+R + + + F ++++ + P T+ S++ L G
Sbjct: 307 KVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Query: 318 ------RLEDAEGL-FDEMVRSGVSPC--AVTYNCF---------FKEY----------- 348
R+ G FD + + +S C + YN + +K++
Sbjct: 367 KFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYL 426
Query: 349 ----RGRKDADSALKLFK-------------------KMKEDGLCSPTAH---------- 375
RG +A+K++K + E G + H
Sbjct: 427 SALCRGGA-PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKY 485
Query: 376 -----TYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQ 430
+Y V ++ ++A I + DMKE G+ P+ Y +I GLC+ K+ + +
Sbjct: 486 PLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRK 545
Query: 431 FFVEMIEKG 439
E I++G
Sbjct: 546 ILRECIQEG 554
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 8/213 (3%)
Query: 248 TIRDADKVFDEMRERGIEPDVTSFSIVL-HVYSRAHKPQLSLDK--FRMMKEQGICPTVA 304
+ A ++F+ +R R + SF I L H SR + L K + M +G P
Sbjct: 158 VVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRE 213
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
+ +++ G + +A + M+ SG+S ++ + + A+ LF KM
Sbjct: 214 RFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM 273
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
+ G CSP TY L++ F+ M+ + ++ G+ PD+ L L+IH +
Sbjct: 274 IQIG-CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 425 WREACQFFVEMIEKGFLPQKVTFETLYRGLIQS 457
+ EA + F + ++ +P + TF ++ L S
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLS 365
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 12/254 (4%)
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPT 302
E+ R D++ + ++ G E F ++L ++ R H +++ + M G P
Sbjct: 83 EKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPN 142
Query: 303 VATYTSVI----KCLASCGRLEDAEGL-FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSA 357
++ K G LE EG+ F + A+++ C GR D
Sbjct: 143 TRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDI---ALSHFC---SRGGRGDLVGV 196
Query: 358 LKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIH 417
+ K+M +G P +G +L++ + + ++ M SG+ ++++++L+
Sbjct: 197 KIVLKRMIGEGF-YPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVS 255
Query: 418 GLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESISF 477
G + ++A F +MI+ G P VT+ +L +G + M+ + K+ E ++
Sbjct: 256 GFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAP 315
Query: 478 GSEFQNYQLKPYRR 491
N + Y R
Sbjct: 316 DIVLCNLMIHTYTR 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 97 LSHSSFHLLIDTMAKVRQFDL-AWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHF 155
+ ++S+ L + ++ + F L + + P + + + ++ + K HF
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 156 -TVLLDTLCKYGYVKLAAEVFNGNKRHC---RFNPDVKMYTVLIYGWCKLGRVETAQSFL 211
+ ++D+L + G A +F + C ++ DV YTV I G + R+E A S
Sbjct: 457 HSAIIDSLIELGKYNTAVHLF----KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLC 512
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSF 271
+M E GI PN TY +++G+C+ E+ K+ E + G+E D +
Sbjct: 513 CDMKEGGIYPNRRTYRTIISGLCK----------EKETEKVRKILRECIQEGVELDPNT- 561
Query: 272 SIVLHVYSRAHKPQLSLDKFRMMKEQ 297
VYS + + +FR + E+
Sbjct: 562 --KFQVYSLLSRYRGDFSEFRSVFEK 585
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 105/272 (38%), Gaps = 42/272 (15%)
Query: 103 HLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTL 162
+L+I T ++ +F+ A ++ T +++R L P+ TF +L +L
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF------------------ASILSSL 362
Query: 163 CKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWC--KLGRVETAQSFLNEMVERGIE 220
C G L + +G D + T + C K+G A L+ M +
Sbjct: 363 CLSGKFDLVPRITHG------IGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFA 416
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEP---DVTSFSIVLHV 277
+ TY V L+ +CR + + + I K D I ++ ++ +H+
Sbjct: 417 LDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHL 476
Query: 278 YSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPC 337
+ R + LD V +YT IK L R+E+A L +M G+ P
Sbjct: 477 FKRCILEKYPLD-------------VVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPN 523
Query: 338 AVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
TY K+ + K+ ++ ++G+
Sbjct: 524 RRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 120/263 (45%), Gaps = 29/263 (11%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
D + ++ G K G + A+ +EM +R +++++N +L+G R
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARC---------- 229
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP--TVA 304
R + A ++F++M ER + S+S ++ YS+A +++ R+M ++ P V
Sbjct: 230 REMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMA----RVMFDKMPLPAKNVV 281
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
T+T +I A G L++A+ L D+MV SG+ A +++ +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 365 KEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKK 424
K L S A+ LL M+ K + +++ D+ + DL + ++HGL
Sbjct: 342 KRSNLGS-NAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGH 396
Query: 425 WREACQFFVEMIEKGFLPQKVTF 447
+EA + F M +G P KVTF
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTF 419
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
Y L E + +M E G+ PN V +L+G+C+ + +++A K+
Sbjct: 107 YPQEPLPPPEDSDEIFKKMKEGGLIPNAV---AMLDGLCK----------DGLVQEAMKL 153
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
F MR++G P+V ++ V+ + +AHK + + FR M+ GI P +Y +++ L +
Sbjct: 154 FGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYN 213
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTY 341
C L+DA EM+ SG SP T+
Sbjct: 214 CNMLDDAVAFCSEMLESGHSPNVPTF 239
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
P+ S + F+ MKE G+ P +++ L G +++A LF M G P V Y
Sbjct: 115 PEDSDEIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 344 FFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
+ + + A ++F+KM+ +G+ +P A +YGVL+Q +M+ +M ES
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGI-APNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
G P++ + L+ LC K +A + +KGF
Sbjct: 231 GHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
+LD LCK G V+ A ++F G R P+V +YT ++ +CK ++E A+ +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLF-GLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 217 RGIEPNVVTYNVLLNGV--CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
GI PN +Y VL+ G+ C + DA EM E G P+V +F +
Sbjct: 195 NGIAPNAFSYGVLVQGLYNC------------NMLDDAVAFCSEMLESGHSPNVPTFVEL 242
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
+ R + + + ++G V
Sbjct: 243 VDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 320 EDAEGLFDEMVRSGVSPCAVTY-NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
ED++ +F +M G+ P AV + K+ A+KLF M++ G P Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLDGLCKDGL----VQEAMKLFGLMRDKGTI-PEVVIYT 170
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
+++ F KA I K I+R M+ +G+ P+ Y +L+ GL +A F EM+E
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 439 GFLPQKVTFETLYRGL 454
G P TF L L
Sbjct: 231 GHSPNVPTFVELVDAL 246
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
Y L E + +M E G+ PN V +L+G+C+ + +++A K+
Sbjct: 107 YPQEPLPPPEDSDEIFKKMKEGGLIPNAV---AMLDGLCK----------DGLVQEAMKL 153
Query: 256 FDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLAS 315
F MR++G P+V ++ V+ + +AHK + + FR M+ GI P +Y +++ L +
Sbjct: 154 FGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYN 213
Query: 316 CGRLEDAEGLFDEMVRSGVSPCAVTY 341
C L+DA EM+ SG SP T+
Sbjct: 214 CNMLDDAVAFCSEMLESGHSPNVPTF 239
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNC 343
P+ S + F+ MKE G+ P +++ L G +++A LF M G P V Y
Sbjct: 115 PEDSDEIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 344 FFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
+ + + A ++F+KM+ +G+ +P A +YGVL+Q +M+ +M ES
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGI-APNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 404 GVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
G P++ + L+ LC K +A + +KGF
Sbjct: 231 GHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
+LD LCK G V+ A ++F G R P+V +YT ++ +CK ++E A+ +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLF-GLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 217 RGIEPNVVTYNVLLNGV--CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIV 274
GI PN +Y VL+ G+ C + DA EM E G P+V +F +
Sbjct: 195 NGIAPNAFSYGVLVQGLYNC------------NMLDDAVAFCSEMLESGHSPNVPTFVEL 242
Query: 275 LHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
+ R + + + ++G V
Sbjct: 243 VDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 320 EDAEGLFDEMVRSGVSPCAVTY-NCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYG 378
ED++ +F +M G+ P AV + K+ A+KLF M++ G P Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLDGLCKDGL----VQEAMKLFGLMRDKGTI-PEVVIYT 170
Query: 379 VLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEK 438
+++ F KA I K I+R M+ +G+ P+ Y +L+ GL +A F EM+E
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES 230
Query: 439 GFLPQKVTFETLYRGL 454
G P TF L L
Sbjct: 231 GHSPNVPTFVELVDAL 246
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 134/335 (40%), Gaps = 31/335 (9%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL--VSDTKTTSEHFTVL---- 158
L+D AK Q A+Q+ E R + + VLI D + F +
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN 226
Query: 159 ---LDTLCKYGYVKLAAEVFNGNKRHCRFNP--DVKMYTVLIYGWCKLGRVETAQSFLNE 213
TL K GYV + N K+ P +V +T LI G+ + G ETA S E
Sbjct: 227 SGSWSTLIK-GYVD--SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFE 283
Query: 214 MVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSI 273
M+E+G++PN T +L+ + +L R I D GI+ D +
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD----------NGIKLDRAIGTA 333
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
++ +Y++ + + F M + I ++T++I+ A GR A F +M+ SG
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDIL----SWTAMIQGWAVHGRFHQAIQCFRQMMYSG 389
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
P V + + D L F M+ D PT Y +++ + +A +
Sbjct: 390 EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEA 449
Query: 394 KEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREA 428
E+ +M + PDL + L K +R A
Sbjct: 450 HELVENMP---INPDLTTWAALYRACKAHKGYRRA 481
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 103/264 (39%), Gaps = 35/264 (13%)
Query: 220 EPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYS 279
E N N L+ G L RFE ++R F M G++PD +F VL S
Sbjct: 88 ERNPFVLNALIRG------LTENARFESSVRH----FILMLRLGVKPDRLTFPFVLKSNS 137
Query: 280 RAHKPQLSLDKFRMMKEQGICPTVATYT--------SVIKCLASCGRLEDAEGLFDEMVR 331
+ FR + T+ + S++ A G+L+ A +F+E
Sbjct: 138 KL--------GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPD 189
Query: 332 SGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIG 391
+ +N Y KD A LF+ M E + ++ L++ ++ + +
Sbjct: 190 RIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE-----RNSGSWSTLIKGYVDSGELN 244
Query: 392 VVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLY 451
K+++ M E V +T LI+G + + A + EM+EKG P + T +
Sbjct: 245 RAKQLFELMPEKNVVS----WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 452 RGLIQSDMLRTWRRLKKKLDEESI 475
+S L + R+ + + I
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGI 324
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 125/300 (41%), Gaps = 57/300 (19%)
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV--CRKVSLH 240
R PDV +Y ++ + + E A L ++ +RG +P+ VTY +++ + C K +L
Sbjct: 588 RLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLV 647
Query: 241 PEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC 300
E F +M++ I P+ ++ ++++ + K ++ M+ +GI
Sbjct: 648 HE------------FFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIV 694
Query: 301 PTVATYTSVIKCLASCGRLEDAEGLFD----------------------------EMVRS 332
+ A Y + +CL S GR + + + ++ R
Sbjct: 695 GSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRV 754
Query: 333 GVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGV 392
P VTY + + +A +F +MK+ +CSP T ++L+ +L+ +
Sbjct: 755 ANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKK--VCSPNLVTCNIMLKAYLQGGLFEE 812
Query: 393 VKEIWRDMKESG------------VGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGF 440
+E+++ M E G V PD + ++ E++KW + + EM+ G+
Sbjct: 813 ARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGY 872
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 31/298 (10%)
Query: 97 LSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFT 156
+S S + LI M K +++ A ++ ++ PN ++ +++ HF
Sbjct: 379 ISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVV-----------SHFN 427
Query: 157 VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVE 216
+LL K G + + N + P + + ++ K A MV+
Sbjct: 428 ILLSAASKRGIWRWGVRLLNKMEDKG-LKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 217 RGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLH 276
G +P V++Y LL+ + K L+ E A +V++ M + GIEP++ +++ +
Sbjct: 487 NGEKPTVISYGALLSAL-EKGKLYDE---------AFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
V + K L + M +GI P+V T+ +VI A G A F M V P
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL---------CSPTAHTYGVLLQMFL 385
+TY + A +L K + +GL +A TYG + + L
Sbjct: 597 NEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATIDLNL 654
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 8/213 (3%)
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK-- 311
+++ +RER E ++ + ++ + +A K +L+ + + ++G P +Y V+
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 312 -----CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
+ G L ++M G+ P +N + +A+++FK M +
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
+G PT +YG LL K + +W M + G+ P+L YT + L ++K+
Sbjct: 487 NGE-KPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFN 545
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
EM KG P VTF + G ++ +
Sbjct: 546 LLDTLLKEMASKGIEPSVVTFNAVISGCARNGL 578
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 191 YTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIR 250
+T +I G+ K GR A M+ +EP+ VT +L+ SL ER
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER------ 271
Query: 251 DADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
+ + RG+ V+ + V+ +Y+++ +LD F + E+ V T+T++I
Sbjct: 272 ----ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----NVVTWTTII 323
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
LA+ G +A +F+ MV++GV P VT+ D +LF M+
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
P YG ++ + +A + E+ + M
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 107/274 (39%), Gaps = 15/274 (5%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
DV +T +I G+ + G VE A M G+ PN VT L++ VC
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS-VCGDA--------- 332
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
+ D + + + D+ + ++ +Y++ + L F + P +
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----W 388
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
+++I + DA GLF M R V P T N Y D A+ + + +
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWR 426
G S G L+ ++ K + +I+ ++E D+ L+ LI G
Sbjct: 449 TGFMSSLDAATG-LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 427 EACQFFVEMIEKGFLPQKVTFETLYRGLIQSDML 460
A Q F+EM+ G P ++TF + S ++
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLV 541
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 174 VFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGV 233
V +G F D + L+ + G+VE A+ + M R +V+++N +++G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR----DVISWNTMISGY 193
Query: 234 CRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRM 293
R ++ DA +FD M ++ D + +L V ++ + ++
Sbjct: 194 YRNGYMN----------DALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 294 MKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKD 353
++E+ + + +++ CGR+++A +FD M R V +T+ C Y D
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDV----ITWTCMINGYTEDGD 299
Query: 354 ADSALKLFKKMKEDGLCSPTAHTYGVLLQM 383
++AL+L + M+ +G+ P A T L+ +
Sbjct: 300 VENALELCRLMQFEGV-RPNAVTIASLVSV 328
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 15/211 (7%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T L+ K V L VF+G ++ P ++ +I G + V A M
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKY-HTGP----WSAIIAGCVQNELVSDALGLFKRMR 412
Query: 216 ERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVL 275
+EPN+ T N LL P +R A + + + G + + + ++
Sbjct: 413 REDVEPNIATLNSLL----------PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 276 HVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVS 335
HVYS+ + + F ++E+ V + ++I G +A +F EMVRSGV+
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 336 PCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
P +T+ + L LF+ M E
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 29/267 (10%)
Query: 184 FNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEE 243
N D ++ I R++ A S + +M E PNV YN L G HP
Sbjct: 801 LNQDCRLMNQFITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGFV--TCSHPIR 854
Query: 244 RFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
E +R M + P ++S ++ S A + SL + + G V
Sbjct: 855 SLELYVR--------MLRDSVSPSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHV 904
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
T++I ++ GR+ +A +FDEM + + YR D DSA L +
Sbjct: 905 KIQTTLIDFYSATGRIREARKVFDEMPERD----DIAWTTMVSAYRRVLDMDSANSLANQ 960
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
M E T L+ ++ + + ++ M D+ +T +I G + K
Sbjct: 961 MSE-----KNEATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNK 1011
Query: 424 KWREACQFFVEMIEKGFLPQKVTFETL 450
++REA F +M+E+G +P +VT T+
Sbjct: 1012 RYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 130/304 (42%), Gaps = 29/304 (9%)
Query: 116 DLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVF 175
D+AW + +R L + + L ++ + TS L++ G ++ A +F
Sbjct: 935 DIAWTTMVSAYRRVLDMDSANSLA--NQMSEKNEATS---NCLINGYMGLGNLEQAESLF 989
Query: 176 NGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCR 235
N D+ +T +I G+ + R A + +M+E GI P+ VT + +++ C
Sbjct: 990 NQMPV-----KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA-CA 1043
Query: 236 KVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF-RMM 294
+ + + +V + G DV S ++ +YS+ + +L F +
Sbjct: 1044 HLGV---------LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 295 KEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDA 354
K+ C + S+I+ LA+ G ++A +F +M V P AVT+ F
Sbjct: 1095 KKNLFC-----WNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 1149
Query: 355 DSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL 414
D ++++ M +D YG ++ +F KA +I E+ +M+ P+ ++
Sbjct: 1150 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME---FEPNAVIWGA 1206
Query: 415 LIHG 418
L+ G
Sbjct: 1207 LLDG 1210
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 271 FSIVLHVYSRAHKPQLSLDKFRMM---KEQGICPTVATYTSVIKCLASCGR--------L 319
++ ++ +++A K +++ FR M K PT+ TY + K L G +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 320 EDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV 379
E LF +MV SG+ P NC K Y + AL++F +M C P + TY
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 380 LLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKG 439
L+ +E+ +MK G P+ Y L++ + +A + EMIE G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 440 FLPQKVTFETL 450
+ +++ TL
Sbjct: 390 RVVDFISYRTL 400
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 45/299 (15%)
Query: 85 LFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRL 144
LFN+A P + S+H+ I + A ++ EMD ++ ++
Sbjct: 158 LFNWASQQPRFTHENCSYHIAIRKLG-------AAKMYQEMDD------------IVNQV 198
Query: 145 VSDTKTTSEH-FTVLLDTLCKYGYVKLAAEVF----NGNKRHCRFNPDVKMYTVLIYGWC 199
+S +E+ + ++ K G + A +F CR P ++ Y +L
Sbjct: 199 LSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECR--PTIRTYHILFKALL 256
Query: 200 KLGR--------VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD 251
G +ET +S +MV+ GIEP+V N L+ G +SLH + D
Sbjct: 257 GRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYV--LSLH--------VND 306
Query: 252 ADKVFDEMRE-RGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVI 310
A ++F +M EP+ ++ ++H + + + MK +G P +Y S++
Sbjct: 307 ALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLV 366
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
A G ++DA EM+ +G ++Y E + D A +L + ++E L
Sbjct: 367 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 28/249 (11%)
Query: 148 TKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETA 207
++ + V++ K+G + A ++F+ + DV +TV+I G+ K+ +E A
Sbjct: 163 SQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN-----DVVSWTVMITGFAKVKDLENA 217
Query: 208 QSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPD 267
+ + + M E+ +VV++N +L+G + + F DA ++F++M G+ P+
Sbjct: 218 RKYFDRMPEK----SVVSWNAMLSG-------YAQNGF---TEDALRLFNDMLRLGVRPN 263
Query: 268 VTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFD 327
T++ IV+ S P L+ +++ E+ + T+++ A C ++ A +F+
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 328 EMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE------DGLCSPTAHTYGVLL 381
E+ G VT+N Y D SA +LF M + + L + AH L
Sbjct: 324 EL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 382 QMFLKADMI 390
+ DMI
Sbjct: 381 AIEFFEDMI 389
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 140/328 (42%), Gaps = 45/328 (13%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIR------------ 142
P S S++ ++ A+ + A +L +M + + PN +T++++I
Sbjct: 225 PEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
Query: 143 ---RLVSDTKTTSEHF--TVLLDTLCKYGYVKLAAEVFN--GNKRHCRFNPDVKMYTVLI 195
+L+ + + F T LLD K ++ A +FN G +R+ + + +I
Sbjct: 285 SLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRN------LVTWNAMI 338
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKV 255
G+ ++G + +A+ + M +R NVV++N L+ G F
Sbjct: 339 SGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEF---------- 384
Query: 256 FDEMRERG-IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLA 314
F++M + G +PD + VL +L +++ I + Y S+I A
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 315 SCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTA 374
G L +A+ +FDEM V V+YN F + D L L KMK++G+ P
Sbjct: 445 RGGNLWEAKRVFDEMKERDV----VSYNTLFTAFAANGDGVETLNLLSKMKDEGI-EPDR 499
Query: 375 HTYGVLLQMFLKADMIGVVKEIWRDMKE 402
TY +L +A ++ + I++ ++
Sbjct: 500 VTYTSVLTACNRAGLLKEGQRIFKSIRN 527
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGIC-PTVATYTSVI 310
A K+FDEM E G+EP V ++ +L Y+R++ + MK C P V TY++++
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 311 KCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLC 370
K + + + L+ EM ++P VT N Y D K+ M C
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 371 SPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKW 425
P T ++L +F I +++ + + G+ P+ + +LI +++ +
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMY 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 112/296 (37%), Gaps = 50/296 (16%)
Query: 82 ALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLI 141
AL +F+ + ++ L+ + K Q + A +L EM + L P
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEP--------- 157
Query: 142 RRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKL 201
T E +T LL + + A + + K + PDV Y+ L+
Sbjct: 158 ---------TVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDA 208
Query: 202 GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD---------- 251
+ + S EM ER I PN VT N++L+G R + ++ E+ + D
Sbjct: 209 SQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGR---VGRFDQMEKVLSDMLVSTACKPD 265
Query: 252 -------------------ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFR 292
+ +++ R GIEP+ +F+I++ Y +
Sbjct: 266 VWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVME 325
Query: 293 MMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEY 348
M++ T +TY ++I+ A G ++ E FD+M G+ T+ C Y
Sbjct: 326 YMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGY 381
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 5/182 (2%)
Query: 287 SLDKFRMMKEQGIC-PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFF 345
+L+ F M++EQ P TY ++ L G+ A+ LFDEM+ G+ P Y
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 346 KEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
Y D A + KMK C P TY LL+ + A +V ++++M E +
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI 226
Query: 406 GPDLDLYTLLIHGLCERKKWREACQFFVEM-IEKGFLPQKVTFE---TLYRGLIQSDMLR 461
P+ +++ G ++ + + +M + P T +++ + + DM+
Sbjct: 227 TPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMME 286
Query: 462 TW 463
+W
Sbjct: 287 SW 288
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 149/355 (41%), Gaps = 35/355 (9%)
Query: 104 LLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLC 163
L+++ + +++ D L+ E + L PN ++ LI +L
Sbjct: 320 LVMEKLESLQEGDDPSGLLAEWAEL-LEPNRVDWIALINQLREGNT-------------- 364
Query: 164 KYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNV 223
+ Y+K+A V + FN + Y+ LI+ K +E + L +M + GI P++
Sbjct: 365 -HAYLKVAEGVLD----EKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDI 419
Query: 224 VTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHK 283
+T L++ + + FER A + F+ ++ G+ PD + ++ Y A K
Sbjct: 420 LTATALVHMYSKSGN------FER----ATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 469
Query: 284 PQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV-TYN 342
P+L + M+ + + + Y ++++ A G A G+ M + P + Y+
Sbjct: 470 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 529
Query: 343 CFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKE 402
F + Y D A F +M++ G P L++ + + + + +++
Sbjct: 530 LFVEAYGKAGQVDKAKSNFDEMRKLG-HKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 588
Query: 403 SGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQ---KVTFETLYRGL 454
G+ + YT+L+ + EA Q V++ + G P +V+ +Y G+
Sbjct: 589 DGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSGV 643
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 20/270 (7%)
Query: 238 SLHPEERFERTIRDADKVFDEMRERGIEP--DVTSFSIVL-----HVYSRAHKPQLS--- 287
SL + + +IR+++ V E+ E G P +V S SI L + + + +LS
Sbjct: 232 SLEQQRDLDNSIRESETVDGEVEEEGFVPSDEVESRSISLPKRKGKLKYKIYGLELSDPK 291
Query: 288 ----LDKFRMMKEQGIC----PTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAV 339
DK +E+ P V++ L S +D GL E + P V
Sbjct: 292 WVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQEGDDPSGLLAEWAEL-LEPNRV 350
Query: 340 TYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRD 399
+ + R + + LK+ + + ++ + + Y L+ + K + I V+ I +
Sbjct: 351 DWIALINQLR-EGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKK 409
Query: 400 MKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDM 459
M ++G+ PD+ T L+H + + A + F + G P + +E + G + +
Sbjct: 410 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 469
Query: 460 LRTWRRLKKKLDEESISFGSEFQNYQLKPY 489
+ RL K++ + + E L+ Y
Sbjct: 470 PKLGERLMKEMQAKELKASEEVYMALLRAY 499
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 174/425 (40%), Gaps = 83/425 (19%)
Query: 102 FHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKT-TSEHFTVLLD 160
++ LI + ++ A+ ++ EM + P+ + L+LI RL K T+ + +D
Sbjct: 742 YNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQID 801
Query: 161 T-LCKYGYVK---LAAEVFNG-NKRHCRFNPDV----KMYTVLIYGWCKLGRVETAQSFL 211
+ Y +K LA ++ + N+ + + K+Y V+ G+CK + L
Sbjct: 802 SSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVL 861
Query: 212 NEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRD-------------------- 251
MV + I +V +Y + RK+ L P+ ++++
Sbjct: 862 GLMVRKNIICSVKSYREYV----RKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIF 917
Query: 252 ----------ADKVFDEMRERGIEPDVTSFSIVLH-----------------VYSRAHKP 284
+KV EM+ RG+ PD T+F+ ++H + S+ KP
Sbjct: 918 YMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKP 977
Query: 285 ------------------QLSLDKFRMMKEQGI-CPTVATYTSVIKCLASCGRLEDAEGL 325
+ +LD +++M+ +G + T +++ L S G + AE
Sbjct: 978 NNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDF 1037
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
+ R+G+ A Y+ K+ R + D A+ L M ++ P + +Y ++ L
Sbjct: 1038 LTRVTRNGM--MAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQ-SIPGSSSYDSVINGLL 1094
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
+ + + + +M E G+ P + ++ L+H CE + E+ + M+ G P +
Sbjct: 1095 RYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQE 1154
Query: 446 TFETL 450
F+T+
Sbjct: 1155 MFKTV 1159
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 33/146 (22%)
Query: 160 DTLCKYGYVKLAAEVFNGNK---------------------RHCRFNPDVKMYTVLIYGW 198
D L G VK +VF GN+ H F D + +LI GW
Sbjct: 309 DLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILI-GW 367
Query: 199 CKL-GRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
C G ++ A +L+E++ +G +P+V +YN +L+G+ RK + + D
Sbjct: 368 CCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRK----------GLWQHTHCILD 417
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHK 283
EM+E G+ +++F I++ Y +A +
Sbjct: 418 EMKENGMMLSLSTFKIMVTGYCKARQ 443
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 21/267 (7%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PD + L++G+ ++ +L+ M+ +G++PN + + + +C
Sbjct: 942 PDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDN--------- 992
Query: 246 ERTIRDADKVFDEMRERG--IEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTV 303
++ A ++ M +G + V IV + S+ P+ R+ + + P
Sbjct: 993 -GDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP-- 1049
Query: 304 ATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKK 363
Y ++IK L+ G L+ A L + M+++ P + +Y+ D A+ +
Sbjct: 1050 -NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTE 1108
Query: 364 MKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERK 423
M E GL SP+ T+ L+ F +A + + + + M G P +++ +I K
Sbjct: 1109 MVELGL-SPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEK 1167
Query: 424 KWREACQFFVEMIEK-GFLPQKVTFET 449
+A + +EM++K G+ +V FET
Sbjct: 1168 NTVKASE-MMEMMQKCGY---EVDFET 1190
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 176/443 (39%), Gaps = 55/443 (12%)
Query: 79 SKIALSLFNYAKSLPNPPLSHSSFHLLIDTMAKVRQFDLAWQLI-------TEMDQRSLT 131
S+ A+ LF++ + PL+ S + +LID + +V + + A+++ E++ ++
Sbjct: 199 SRKAVMLFDWMRRKGLVPLT-SCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNID 257
Query: 132 PNPSTF-LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKR---------H 181
L+ + + V + + + L L Y K+ +N +
Sbjct: 258 SIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIG-YNEKQDFEDLLSFIGE 316
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
++ PDV + +++ C+ E A ++ E+ G + + VT+ +L+ C
Sbjct: 317 VKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCC------- 369
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
+E I+ A E+ +G +PDV S++ +L R Q + MKE G+
Sbjct: 370 ---YEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMML 426
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
+++T+ ++ + E+A+ + ++M G+ + + + + A++L
Sbjct: 427 SLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRL- 485
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTL-----LI 416
K D S + ++L D+ D E V LD L LI
Sbjct: 486 -KRDNDSTFSKAEFFDDLGNGLYLHTDL---------DAYEQRVNMVLDRSVLPEFNSLI 535
Query: 417 HGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQS--------DMLRTWRRLKK 468
E + A + EM G + +F L R L S +L W +L
Sbjct: 536 VRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAY 595
Query: 469 KLDEESISFGSEFQNYQLKPYRR 491
+LD E+++F Q Y K + R
Sbjct: 596 QLDGETLNF--LVQEYCKKGFSR 616
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 139/318 (43%), Gaps = 51/318 (16%)
Query: 171 AAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLL 230
AA +F G C F+ + +I G+ + E A F NEM++RG EP+ TY LL
Sbjct: 85 AASIFRGIDDPCTFD-----FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 231 NGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDK 290
R ++IR+ ++ ++ + G+E DV + ++++Y R + +LS
Sbjct: 140 KACTRL----------KSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAV 189
Query: 291 FRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVR------------SGVSPCA 338
F ++ + T A+++S++ A G + LF M S + CA
Sbjct: 190 FEKLESK----TAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACA 245
Query: 339 VTYNCFFKEYRGRKDADSALK--LFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
T G + ++ L + + E + T+ L+ M++K + I
Sbjct: 246 NT---------GALNLGMSIHGFLLRNISELNIIVQTS-----LVDMYVKCGCLDKALHI 291
Query: 397 WRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQ 456
++ M++ +L Y+ +I GL + A + F +MI++G P V + ++
Sbjct: 292 FQKMEKRN---NLT-YSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSH 347
Query: 457 SDMLRTWRRLKKKLDEES 474
S +++ RR+ ++ +E
Sbjct: 348 SGLVKEGRRVFAEMLKEG 365
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVER-GIEPNVVTYNVLLNGVCRKVSLHPEER 244
PDV Y ++ + G V L+ M E + N++TYN +LNG+ RK R
Sbjct: 210 PDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGM-RKAC-----R 263
Query: 245 FERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVA 304
F+ + +++EM + GIEPD+ S++ V+ R+ + SL F MK++ I P+V
Sbjct: 264 FDMCL----VIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVY 319
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEM 329
Y ++I CL G + A L DE+
Sbjct: 320 VYRALIDCLKKSGDFQSALQLSDEL 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 194 LIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDAD 253
+I+ + + +++ L EM E +P+V+TYN +L+ + R + +
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRA----------GLVNEIL 232
Query: 254 KVFDEMRER-GIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKC 312
V M+E + ++ +++ VL+ +A + + L + M + GI P + +YT+VI
Sbjct: 233 GVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDS 292
Query: 313 LASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
L G ++++ LFDEM + + P Y + D SAL+L ++K
Sbjct: 293 LGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKN 346
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 105 LIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEHFTVLLDTLCK 164
+I A+ RQ D ++ EM + P+ T+ +LD L +
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITY------------------NSVLDILGR 224
Query: 165 YGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVV 224
G V V + K C + ++ Y ++ G K R + NEMV+ GIEP+++
Sbjct: 225 AGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLL 284
Query: 225 TYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKP 284
+Y +++ + R ++++ ++FDEM++R I P V + ++ ++
Sbjct: 285 SYTAVIDSLGR----------SGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDF 334
Query: 285 QLSL 288
Q +L
Sbjct: 335 QSAL 338
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 250 RDADKVF---DEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQ-GICPTVAT 305
R DKV EM+E +PDV +++ VL + RA L MKE + + T
Sbjct: 191 RQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIIT 250
Query: 306 YTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMK 365
Y +V+ + R + +++EMV+ G+ P ++Y + +L+LF +MK
Sbjct: 251 YNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMK 310
Query: 366 EDGLCSPTAHTYGVLLQMFLKA 387
+ + P+ + Y L+ K+
Sbjct: 311 QRQI-RPSVYVYRALIDCLKKS 331
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 14/214 (6%)
Query: 187 DVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFE 246
+V M+T LI G+ K R A +M+ I PN T +L C +
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVS-CSSLG-------- 326
Query: 247 RTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATY 306
++R V M GIE D +F+ + +Y+R Q++ F MM E+ V ++
Sbjct: 327 -SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER----NVISW 381
Query: 307 TSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKE 366
+S+I G E+A F +M V P +VT+ + K F+ M
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 367 DGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
D P Y ++ + +A IG K +M
Sbjct: 442 DYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 38/325 (11%)
Query: 156 TVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMV 215
T L++ K G ++ A VF G++R DV Y LI G+ G A EM
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGGSER------DVFGYNALISGFVVNGSPLDAMETYREMR 153
Query: 216 ERGIEPNVVTYNVLLNGV-------CRKV-SLHPEERFER----------------TIRD 251
GI P+ T+ LL G +KV L + F+ ++ D
Sbjct: 154 ANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVED 213
Query: 252 ADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIK 311
A KVFDE+ +R D ++ +++ YS+ + + +L F M+E+G+ + T TSV+
Sbjct: 214 AQKVFDELPDR---DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 312 CLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCS 371
G +++ + V++G V N Y K + A +F+ M E L +
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFT 330
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQF 431
+ VL D G + ++ M SG+ PD+ T ++ R+ +
Sbjct: 331 WNS----VLCVHDYCGDHDGTLA-LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREI 385
Query: 432 FVEMIEKGFLPQKVTFETLYRGLIQ 456
MI G L +K + E ++ L+
Sbjct: 386 HGYMIVSGLLNRKSSNEFIHNSLMD 410
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 183 RFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPE 242
+++ D+ + L+ +CK G +E A N+M ER +V+T++ +++G+ +
Sbjct: 288 KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQN------ 337
Query: 243 ERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKE-QGICP 301
++A K+F+ M+ G +P+ + VL S A + FR MK+ GI P
Sbjct: 338 ----GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 302 TVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLF 361
Y +I L G+L+DA L +EM P AVT+ R +++ L +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGACRVQRNM--VLAEY 448
Query: 362 KKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGV 405
K L A TY +L ++ + V+EI M++ G+
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 67/263 (25%)
Query: 249 IRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTS 308
+ DA ++FD+M +R +V S++ ++ YS+ Q +L+ +M + P V TY+S
Sbjct: 112 LNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 309 V--------------------------------IKCLASCGRLEDAEGLFDEMVRSGVSP 336
V I A G EDA +FDEMV
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGD--- 224
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGV--------LLQMFLKAD 388
A+ +N + +D AL+LFK+MK G + A V LL++ ++A
Sbjct: 225 -AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 389 MIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFE 448
+ +VK DL L L+ C+ +A + F +M E+ +T+
Sbjct: 284 -VHIVK----------YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV----ITWS 328
Query: 449 TLYRGLIQS----DMLRTWRRLK 467
T+ GL Q+ + L+ + R+K
Sbjct: 329 TMISGLAQNGYSQEALKLFERMK 351
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 24/302 (7%)
Query: 138 LVLIRRLVSDTKTTSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYG 197
LV R + D + T L+DT K G ++ A VF K + +V T +I G
Sbjct: 161 LVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK-----DENVVCCTSMISG 215
Query: 198 WCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFD 257
+ G VE A+ N + ++V YN ++ G R E +R++ ++
Sbjct: 216 YMNQGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRS-----GETAKRSV----DMYI 262
Query: 258 EMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCG 317
M+ G P++++F+ V+ S ++ + + G+ + +S++ A CG
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 318 RLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTY 377
+ DA +FD+M V ++ Y + + AL+LF +MKE + P T+
Sbjct: 323 GINDARRVFDQMQEKNV----FSWTSMIDGYGKNGNPEEALELFTRMKEFRI-EPNYVTF 377
Query: 378 GVLLQMFLKADMIGVVKEIWRDM-KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMI 436
L + ++ EI+ M ++ + P ++ Y ++ + +A +F M
Sbjct: 378 LGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
Query: 437 EK 438
E+
Sbjct: 438 ER 439
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 160/390 (41%), Gaps = 57/390 (14%)
Query: 95 PPLSHSSFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVLIRRLVSDTKTTSEH 154
P S S+ LI + + DLA +L +M P V+I
Sbjct: 140 PHRSEVSWTALISGYIRCGELDLASKLFDQM--------PHVKDVVI------------- 178
Query: 155 FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEM 214
+ ++D K G + A +F+ + V +T +I+G+C + ++ A+ + M
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMT-----HKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 215 VERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRER-GIEPDVTSFSI 273
ER N+V++N ++ G C+ + P+E ++F EM+ ++PD +
Sbjct: 234 PER----NLVSWNTMIGGYCQ--NKQPQEGI--------RLFQEMQATTSLDPDDVTILS 279
Query: 274 VLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSG 333
VL S L ++ + + V T+++ + CG +E A+ +FDEM
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 334 VSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVV 393
V+ ++N Y +A +AL LF M + P T +L + + G+V
Sbjct: 340 VA----SWNAMIHGYALNGNARAALDLFVTMMIEE--KPDEIT---MLAVITACNHGGLV 390
Query: 394 KE---IWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETL 450
+E + M+E G+ ++ Y ++ L +EA M F P + +
Sbjct: 391 EEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM---PFEPNGIILSSF 447
Query: 451 YRGLIQ-SDMLRTWRRLKKKLDEESISFGS 479
Q D+ R R LKK ++ E + G+
Sbjct: 448 LSACGQYKDIERAERILKKAVELEPQNDGN 477
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 112/292 (38%), Gaps = 54/292 (18%)
Query: 219 IEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVY 278
+EP++V YN +LN + + VF E+R+ G+ P+ ++ + + V
Sbjct: 337 LEPDLVVYNAILNACVPTLQW----------KAVSWVFVELRKNGLRPNGATYGLAMEVM 386
Query: 279 SRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGV---- 334
+ K D FR MK G P TY +++ L G++E+A +M + GV
Sbjct: 387 LESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTG 446
Query: 335 --------------------------------SPCAVTYNCFFKEYRGRKDADSALKLFK 362
P +T+ D + +F+
Sbjct: 447 SVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQ 506
Query: 363 KMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM---KESGVGPDLDLYTLLIHGL 419
MK+ C P T ++L+++ + DM KE++ ++ KE+ + P+ Y+ ++
Sbjct: 507 YMKDK--CDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEAS 564
Query: 420 CERKKWREACQFFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 471
+W + M+ G+ + ++ LI++ W L+ D
Sbjct: 565 ARSLQWEYFEHVYQTMVLSGYQMDQTKHASM---LIEASRAGKWSLLEHAFD 613
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 34/270 (12%)
Query: 142 RRLVSDTKTTSEH-FTVLLDTLCKYGYVKLAAEVFNGNKRHCR-----FNPDVKMYTVLI 195
RR++S + S + FT ++ + +++ G HC F D + L+
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRI------GKGVHCHAVVSGFGLDTYVQAALV 149
Query: 196 YGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERT--IRDAD 253
+ K G +E A+ + M E+ I V +N L++G FE+ +A
Sbjct: 150 TFYSKCGDMEGARQVFDRMPEKSI----VAWNSLVSG------------FEQNGLADEAI 193
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
+VF +MRE G EPD +F +L ++ L + + +G+ V T++I
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPT 373
+ CG + A +FD+M + V+ + Y A++LF KM++D P
Sbjct: 254 SRCGDVGKAREVFDKMKETNVA----AWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPN 309
Query: 374 AHTYGVLLQMFLKADMIGVVKEIWRDMKES 403
T+ +L A ++ + +++ M +S
Sbjct: 310 NVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 221 PNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSR 280
PN+ YN L+NG F T+ +F +R+ G+ +F +VL +R
Sbjct: 74 PNIFLYNSLINGFVNN------HLFHETL----DLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 281 AHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVT 340
A +L +D ++ + G VA TS++ + GRL DA LFDE+ V VT
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV----VT 179
Query: 341 YNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDM 400
+ F Y A+ LFKKM E G+ P ++ +L + + + I + M
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGV-KPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 401 KESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKVTFETLYRG 453
+E + + + T L++ + K +A F M+EK VT+ T+ +G
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI----VTWSTMIQG 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 130/321 (40%), Gaps = 60/321 (18%)
Query: 182 CRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHP 241
C FN DV T L+ + GR+ A +E+ +R +VVT+ L +G H
Sbjct: 140 CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTS-GRH- 193
Query: 242 EERFERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKF--RMMKEQGI 299
R+A +F +M E G++PD S+ IV + + H L ++ + M+E +
Sbjct: 194 --------REAIDLFKKMVEMGVKPD--SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 300 CPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALK 359
T+++ A CG++E A +FD MV + VT++ + Y ++
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI----VTWSTMIQGYASNSFPKEGIE 299
Query: 360 LFKKMKEDGL-------------CSPTA----HTYGV-----------------LLQMFL 385
LF +M ++ L C+ +G+ L+ M+
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
K + E++++MKE D+ + I GL + + + F + + G P
Sbjct: 360 KCGAMARGFEVFKEMKE----KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 446 TFETLYRGLIQSDMLRTWRRL 466
TF L G + + +++ R
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRF 436
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 19/248 (7%)
Query: 158 LLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRVETAQSFLNEMVER 217
L+D K G ++++ ++F G+ R D + +I G+ + G E +M+E+
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAER---DQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 218 GIEPNVVTYNVLLNGVCRKVSLHPEERFER-TIRDADKVFDEMRERGIEPDVTSFSIVLH 276
I PN VT +L + S+ ++ +IR ++ +V S ++
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-----------LDQNVFVASALVD 564
Query: 277 VYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSP 336
+YS+A + + D F KE+ TYT++I G E A LF M SG+ P
Sbjct: 565 MYSKAGAIKYAEDMFSQTKER----NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP 620
Query: 337 CAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEI 396
A+T+ D LK+F++M+E P++ Y + M + + E
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEF 680
Query: 397 WRDMKESG 404
+ + E G
Sbjct: 681 VKGLGEEG 688
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 20/262 (7%)
Query: 129 SLTPNPSTFLV--LIRRLVSDTKTTSEH-FTVLLDTLCKYGYVKLAAEVFNGNKRHCRFN 185
S +PNP LV + R+ S K+ S+ + + +L G A E+ R+ +
Sbjct: 344 SGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKA-MRNAGYE 402
Query: 186 PDVKMYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERF 245
PD Y+ L++G CK R+E A+ L++M +G P++ T+ +L+ G C+ L
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDK---- 458
Query: 246 ERTIRDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQ-LSLDKFRMMKEQGICPTVA 304
A F M E+G + D +++ + +K + S+ M+K + P +
Sbjct: 459 ------ALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQS 512
Query: 305 TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKM 364
TY +I L + E+A L M + A ++ + ++ +DA L +
Sbjct: 513 TYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSK 572
Query: 365 KEDGLCSPTAHTYGVLLQMFLK 386
SP+ Y +++ F +
Sbjct: 573 D-----SPSFAAYFHVIEAFYR 589
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 60/285 (21%)
Query: 209 SFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGIEPDV 268
S ++EM G + ++ TY + + + + R + + K+++ M + +P +
Sbjct: 284 SVVDEMKTAGYDMDLDTY----------IKVSRQFQKSRMMAETVKLYEYMMDGPFKPSI 333
Query: 269 TSFSIVLHVYSRAHKPQLSLDKFRMMKE---QGICPTVATYTSVIKCLASCGRLEDAEGL 325
S++L S + P L L FR+ ++ G + A Y + + L S GR ++AE +
Sbjct: 334 QDCSLLLRYLSGSPNPDLDL-VFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEI 392
Query: 326 FDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFL 385
M +G P +TY+ +F GLC
Sbjct: 393 TKAMRNAGYEPDNITYSQL---------------VF------GLC--------------- 416
Query: 386 KADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREACQFFVEMIEKGFLPQKV 445
KA + + + M+ G PD+ +T+LI G C+ + +A F M+EKGF
Sbjct: 417 KAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSN 476
Query: 446 TFETLYRGLIQSDMLRTWRRLKKKLDEESISFGSEFQNYQLKPYR 490
+ L G + + K + SI +N +KP++
Sbjct: 477 LLDVLIDGFV----------IHNKFEGASIFLMEMVKNANVKPWQ 511
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 19/246 (7%)
Query: 190 MYTVLIYGWCKLGRVETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 249
++++++ G+ ++G V A++ + R ++V +N L+ G + + +
Sbjct: 210 VWSLMMSGYFRIGDVHEARAIFYRVFAR----DLVIWNTLIAG-------YAQNGYSD-- 256
Query: 250 RDADKVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSV 309
DA F M+ G EPD + S +L +++ + + + ++ +GI ++
Sbjct: 257 -DAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNAL 315
Query: 310 IKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRGRKDADSALKLFKKMKEDGL 369
I A CG LE+A +F+ + V+ C +C +G++ AL++F M+ L
Sbjct: 316 IDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKE----ALEMFSTMESLDL 371
Query: 370 CSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLDLYTLLIHGLCERKKWREAC 429
P T+ +L + + +I+ +MK V P++ + LIH L K +EA
Sbjct: 372 -KPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAY 430
Query: 430 QFFVEM 435
+ EM
Sbjct: 431 RLVKEM 436
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 161/366 (43%), Gaps = 74/366 (20%)
Query: 101 SFHLLIDTMAKVRQFDLAWQLITEMDQRSLTPNPSTFLVL---------------IRRLV 145
S++L+I ++++++ + +L+ EM++ ++P T L++ + V
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 146 SDTKT--TSEHFTVLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGR 203
S+ KT + L++ G + +A +F K DV +T ++ G+ + G
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-----DVISWTSIVKGYVERGN 317
Query: 204 VETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERG 263
++ A+++ ++M R + +++ ++++G R + ++ ++F EM+ G
Sbjct: 318 LKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFN----------ESLEIFREMQSAG 363
Query: 264 IEPDVTSFSIVLHVYSRAHKPQLSL--------DKFRMMKEQGI------------CPTV 303
+ PD F++V + + AH L + DK ++ + + C
Sbjct: 364 MIPD--EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 304 A-------------TYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRG 350
A T+T+++ LA+ G+ ++A +F +M + P +TY
Sbjct: 422 AQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
Query: 351 RKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPDLD 410
D A K F KM+ D P+ YG ++ M +A G+VKE + +++ + P+
Sbjct: 482 SGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA---GLVKEAYEILRKMPMNPNSI 538
Query: 411 LYTLLI 416
++ L+
Sbjct: 539 VWGALL 544
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 149 KTTSEHFT----VLLDTLCKYGYVKLAAEVFNGNKRHCRFNPDVKMYTVLIYGWCKLGRV 204
K +E FT + D L K G A E+F+ K R PDV +T ++ + G+
Sbjct: 190 KMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRM-PDVVAHTAIVEAYANAGQA 248
Query: 205 ETAQSFLNEMVERGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRDADKVFDEMRERGI 264
+ M+ G+ PN TY+VL+ G+ H +DA K EM G+
Sbjct: 249 KETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTH---------KDAKKYLLEMMGNGM 299
Query: 265 EPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICP 301
P+ +++ V + R K + + + + MK +G P
Sbjct: 300 SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVP 336
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 254 KVFDEMRERGIEPDVTSFSIVLHVYSRAHKPQLSLDKFRMMKEQGICPTVATYTSVIKCL 313
++F +MR G + L R H+ +L+ F +K++ P V +T++++
Sbjct: 186 EIFHKMRTEGFTNEAVKMFDALSKDGRTHE---ALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 314 ASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFK--EYRGRKDADSALKLFKKMKEDGLCS 371
A+ G+ ++ +F M+ SGVSP A TY+ K G+ D A K +M +G+ S
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKD-AKKYLLEMMGNGM-S 300
Query: 372 PTAHTYGVLLQMFLKADMIGVVKEIWRDMKESGVGPD 408
P A TY + + F++ +E+ ++MK G PD
Sbjct: 301 PNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 8/163 (4%)
Query: 291 FRMMKEQGICPTVATYTSVIKCLASCGRLEDAEGLFDEMVRSGVSPCAVTYNCFFKEYRG 350
F M+ +G + L+ GR +A LF ++ P V + + Y
Sbjct: 188 FHKMRTEGFTNEA---VKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYAN 244
Query: 351 RKDADSALKLFKKMKEDGLCSPTAHTYGVLLQMFLKAD--MIGVVKEIWRDMKESGVGPD 408
A LK+F +M G+ SP A+TY VL++ L AD K+ +M +G+ P+
Sbjct: 245 AGQAKETLKVFMRMLASGV-SPNAYTYSVLIKG-LAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 409 LDLYTLLIHGLCERKKWREACQFFVEMIEKGFLP-QKVTFETL 450
YT + K A + EM KGF+P +K E L
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 345