Miyakogusa Predicted Gene

Lj0g3v0144389.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0144389.1 tr|I7LZP3|I7LZP3_TETTS CAP-Gly domain containing
protein OS=Tetrahymena thermophila (strain SB210)
G,36.96,3e-18,Ubiquitin-like,NULL; seg,NULL; no description,NULL;
DYNACTIN 1-RELATED MICROTUBULE-BINDING,NULL,CUFF.8761.1
         (175 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10220.1 | Symbols:  | tubulin folding cofactor B | chr3:3161...   231   3e-61

>AT3G10220.1 | Symbols:  | tubulin folding cofactor B |
           chr3:3161977-3164037 FORWARD LENGTH=243
          Length = 243

 Score =  231 bits (588), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 107/160 (66%), Positives = 133/160 (83%)

Query: 1   MASSLQKIDGDETVLLRVTHSNLKTFNPDIRFSLQLTVEAVKEKLWKKCGTSVNSMHLEL 60
           MA+S  +++GD++V L +TH+NLK+F+ D RFS Q++VEAVKEKLWKKCGTSVNSM LEL
Sbjct: 1   MATSRLQLEGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALEL 60

Query: 61  YDDTHVKITDLTDNSKPLGFYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDD+  K+  L+D+S+PLGF+SP DGFRLH++DLDPSSVT+GGWLEDTSLVEKY ISEE 
Sbjct: 61  YDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEED 120

Query: 121 FNKREGTFRKYKEKLTSQIPSNVEAKIPDNYMEDLCVDIK 160
           + KR  +FRK+KEK  SQ P   EAK  +NYMEDLC +IK
Sbjct: 121 YAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIK 160