Miyakogusa Predicted Gene

Lj0g3v0143149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0143149.1 CUFF.8721.1
         (428 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24270.2 | Symbols: EMB140 | EMBRYO DEFECTIVE 140 | chr4:1258...   463   e-130
AT4G24270.1 | Symbols: EMB140 | EMBRYO DEFECTIVE 140 | chr4:1258...   462   e-130
AT1G17760.1 | Symbols: CSTF77, ATCSTF77 | Tetratricopeptide repe...    49   9e-06

>AT4G24270.2 | Symbols: EMB140 | EMBRYO DEFECTIVE 140 |
           chr4:12581765-12587293 REVERSE LENGTH=817
          Length = 817

 Score =  463 bits (1191), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/376 (57%), Positives = 286/376 (76%), Gaps = 3/376 (0%)

Query: 51  PSNYDSHLQYIKLLRGMGDVDKLRRARESMSEMFPLTPAMWQEWIKDEISLNTASGPEAF 110
           P NYD+++QYIKLLR   +++KLR+ARE+MS +FPL+P++W EW +DE SL   +  E  
Sbjct: 63  PYNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASL---AASENV 119

Query: 111 SEILKLYERGVFDYLSVSLWCDYINFVQEFDPMVRQCSPTGISKSRDLFESALTAAGLHV 170
            EI+ LYERG+ DY SVSLWCDY++F+ EFDP VR     GISK R LFE A+ AAG HV
Sbjct: 120 PEIVMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHV 179

Query: 171 AQGSKIWEAYRQYELAILLTIEETDTQAKEKQIQRIRSLFHRQLSVPHAGMNSTLVAYKT 230
            +G++IWE YR++E  +L TI+E D + + KQIQRIRS+FHR LSVP   ++STL+AYKT
Sbjct: 180 TEGNRIWEGYREFEQGVLATIDEADIEERNKQIQRIRSIFHRHLSVPLENLSSTLIAYKT 239

Query: 231 WEVEQGNLHDVESNDLVDKYPHVASAYQKALEMYNARVHLEEQVSNPDISDSERLQHYMN 290
           WE+EQG   D+ S+DL      VA A +KA +MY+ R HLEE +S  D+SD+E+ Q +MN
Sbjct: 240 WELEQGIDLDIGSDDLSKVSHQVAVANKKAQQMYSERAHLEENISKQDLSDTEKFQEFMN 299

Query: 291 YLKFEQSSGMPARVQVLYERSIADFPISPDLWLDYTCYLDKTLKAGNIVSNVYSRATKNC 350
           Y+KFE++SG P RVQ +YER++A++P+S DLW+DYT YLDKTLK G  +++ YSRAT++C
Sbjct: 300 YIKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRATRSC 359

Query: 351 SWVGQLWGQYMLSLERVHASEEDLAKIFEKSLQYTFSTLDEYLDLFLTRVDGLRRRMEST 410
            W G LW +Y+L+LER  ASE+++  +FEKSLQ TFS+ +EYLDL+LTRVDGLRRRM ST
Sbjct: 360 PWTGDLWARYLLALERGSASEKEIYDVFEKSLQCTFSSFEEYLDLYLTRVDGLRRRMLST 419

Query: 411 IEENLLEYKIIRETFQ 426
                L+Y +IRETFQ
Sbjct: 420 RMLEALDYSLIRETFQ 435


>AT4G24270.1 | Symbols: EMB140 | EMBRYO DEFECTIVE 140 |
           chr4:12581765-12587293 REVERSE LENGTH=816
          Length = 816

 Score =  462 bits (1190), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/376 (57%), Positives = 286/376 (76%), Gaps = 3/376 (0%)

Query: 51  PSNYDSHLQYIKLLRGMGDVDKLRRARESMSEMFPLTPAMWQEWIKDEISLNTASGPEAF 110
           P NYD+++QYIKLLR   +++KLR+ARE+MS +FPL+P++W EW +DE SL   +  E  
Sbjct: 63  PYNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASL---AASENV 119

Query: 111 SEILKLYERGVFDYLSVSLWCDYINFVQEFDPMVRQCSPTGISKSRDLFESALTAAGLHV 170
            EI+ LYERG+ DY SVSLWCDY++F+ EFDP VR     GISK R LFE A+ AAG HV
Sbjct: 120 PEIVMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHV 179

Query: 171 AQGSKIWEAYRQYELAILLTIEETDTQAKEKQIQRIRSLFHRQLSVPHAGMNSTLVAYKT 230
            +G++IWE YR++E  +L TI+E D + + KQIQRIRS+FHR LSVP   ++STL+AYKT
Sbjct: 180 TEGNRIWEGYREFEQGVLATIDEADIEERNKQIQRIRSIFHRHLSVPLENLSSTLIAYKT 239

Query: 231 WEVEQGNLHDVESNDLVDKYPHVASAYQKALEMYNARVHLEEQVSNPDISDSERLQHYMN 290
           WE+EQG   D+ S+DL      VA A +KA +MY+ R HLEE +S  D+SD+E+ Q +MN
Sbjct: 240 WELEQGIDLDIGSDDLSKVSHQVAVANKKAQQMYSERAHLEENISKQDLSDTEKFQEFMN 299

Query: 291 YLKFEQSSGMPARVQVLYERSIADFPISPDLWLDYTCYLDKTLKAGNIVSNVYSRATKNC 350
           Y+KFE++SG P RVQ +YER++A++P+S DLW+DYT YLDKTLK G  +++ YSRAT++C
Sbjct: 300 YIKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRATRSC 359

Query: 351 SWVGQLWGQYMLSLERVHASEEDLAKIFEKSLQYTFSTLDEYLDLFLTRVDGLRRRMEST 410
            W G LW +Y+L+LER  ASE+++  +FEKSLQ TFS+ +EYLDL+LTRVDGLRRRM ST
Sbjct: 360 PWTGDLWARYLLALERGSASEKEIYDVFEKSLQCTFSSFEEYLDLYLTRVDGLRRRMLST 419

Query: 411 IEENLLEYKIIRETFQ 426
                L+Y +IRETFQ
Sbjct: 420 RMLEALDYSLIRETFQ 435


>AT1G17760.1 | Symbols: CSTF77, ATCSTF77 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr1:6110208-6116271
           REVERSE LENGTH=734
          Length = 734

 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/345 (20%), Positives = 143/345 (41%), Gaps = 44/345 (12%)

Query: 78  ESMSEMFPLTPAMWQEWIKDEISLNTASGPEAFSEILKLYERGVFDYLSVSLWCDYINFV 137
           E +  ++P +   W+++++ ++++N     +      +++ R +   L V LW  YI F+
Sbjct: 30  EQLLSLYPTSARFWKQYVEAQMAVNNDDATK------QIFSRCLLTCLQVPLWQCYIRFI 83

Query: 138 QEFDPMVRQCSPTGISKSRDLFESALTAAGLHVAQGSKIWEAYRQYELAILLTIEETDTQ 197
           ++   +  +    G  ++   FE  L   G  +A G  IW  Y    +A L ++   +  
Sbjct: 84  RK---VYDKKGAEGQEETTKAFEFMLNYIGTDIASGP-IWTEY----IAFLKSLPALNLN 135

Query: 198 AKEKQIQRIRSLFHRQLSVPHAGMNSTLVAYKTWEVEQGNLHDVESNDLVDKYPHVASAY 257
               +   +R ++HR +  P   +      +K +E  +  ++   +  LV++Y      +
Sbjct: 136 EDLHRKTALRKVYHRAILTPTHHVEQL---WKDYENFENTVNRQLAKGLVNEY---QPKF 189

Query: 258 QKALEMYNARVHLEEQVS------NPDISDSERLQ--HYMNYLKFEQSSGMPARVQV--- 306
             A  +Y  R    E++        P  +  E  Q   +  +L FE+  G P R+     
Sbjct: 190 NSARAVYRERKKYIEEIDWNMLAVPPTGTSKEETQWVAWKKFLSFEK--GNPQRIDTASS 247

Query: 307 ------LYERSIADFPISPDLWLDYTCYLDKTLKAGNIVSNVYSRATKNCSWVGQLWGQY 360
                  YE+ +      PD+W DY  +  K+  + +    V+ RA K      ++    
Sbjct: 248 TKRIIYAYEQCLMCLYHYPDVWYDYAEWHVKS-GSTDAAIKVFQRALKAIP-DSEMLKYA 305

Query: 361 MLSLERVHASEEDLAKIFEKSLQYTFSTLD--EYLDLFLTRVDGL 403
              +E    + +   K++E  L  + ++L   +YL  FL R +G+
Sbjct: 306 FAEMEESRGAIQSAKKLYENILGASTNSLAHIQYLR-FLRRAEGV 349