Miyakogusa Predicted Gene

Lj0g3v0142769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0142769.1 Non Chatacterized Hit- tr|I3ST46|I3ST46_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.44,0,Peptidase_S24,Peptidase S24/S26A/S26B; LexA/Signal
peptidase,Peptidase S24/S26A/S26B/S26C; SIGNALPTA,CUFF.9169.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52600.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...   342   6e-95
AT3G15710.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family pr...   315   1e-86

>AT1G52600.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr1:19590612-19592486 FORWARD LENGTH=180
          Length = 180

 Score =  342 bits (878), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 167/180 (92%), Positives = 175/180 (97%)

Query: 1   MGWIGETVDSVKSLQIRQVLTQAVTLGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEP 60
           MGWIGETVDS+KS+QIRQ+ TQA++LGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEP
Sbjct: 1   MGWIGETVDSIKSIQIRQLFTQAISLGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEP 60

Query: 61  GFKRGDILFLRMSKEPIRAGEIVVFNVDGREIPIVHRVIKVHEREDNGEVDVLTKGDNNY 120
           GFKRGDILFL MSK+PIRAGEIVVFNVDGR+IPIVHRVIKVHERE+ GEVDVLTKGDNNY
Sbjct: 61  GFKRGDILFLHMSKDPIRAGEIVVFNVDGRDIPIVHRVIKVHERENTGEVDVLTKGDNNY 120

Query: 121 GDDRLLYAHGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD 180
           GDDRLLYA GQLWL RHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD
Sbjct: 121 GDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD 180


>AT3G15710.1 | Symbols:  | Peptidase S24/S26A/S26B/S26C family
           protein | chr3:5323564-5324785 REVERSE LENGTH=180
          Length = 180

 Score =  315 bits (806), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 158/180 (87%), Positives = 167/180 (92%)

Query: 1   MGWIGETVDSVKSLQIRQVLTQAVTLGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEP 60
           MG+IGETVDS+KS++IRQVLTQA+TLGMIVTSALIIWKAL+CVTGSESPVVVVLS SMEP
Sbjct: 1   MGFIGETVDSIKSIKIRQVLTQAITLGMIVTSALIIWKALICVTGSESPVVVVLSESMEP 60

Query: 61  GFKRGDILFLRMSKEPIRAGEIVVFNVDGREIPIVHRVIKVHEREDNGEVDVLTKGDNNY 120
           GF+RGDILFLRM+ EPIRAGEIVVF+VDGREIPIVHR IKVHER D   VDVLTKGDNN 
Sbjct: 61  GFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAIKVHERGDTKAVDVLTKGDNND 120

Query: 121 GDDRLLYAHGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD 180
            DD  LYA GQLWL RHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD
Sbjct: 121 IDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD 180