Miyakogusa Predicted Gene

Lj0g3v0142759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0142759.1 Non Chatacterized Hit- tr|B9RD37|B9RD37_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,73.33,8e-16,FAMILY NOT NAMED,NULL,gene.g10837.t1.1
         (115 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44970.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    78   1e-15
AT2G44970.2 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    78   1e-15

>AT2G44970.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr2:18548999-18552019 REVERSE LENGTH=503
          Length = 503

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 5/60 (8%)

Query: 3   EIIEYIEETYWGSKKRVLLLGHSK-GVHAAAALSLYWYDLNE----IGIAQSPYGGTPIA 57
           EI EYIEE  WGS KRVLLLGHSK G+ AAAALSLYW +L +    + +AQSPYGG+PIA
Sbjct: 259 EIKEYIEELCWGSNKRVLLLGHSKGGIDAAAALSLYWPELKDKVAGLVLAQSPYGGSPIA 318



 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 7/55 (12%)

Query: 67  ASVVVGPKQKMDHAWTVYTPLN------DASQVCEALLSLLVEM-AEQSHELAIK 114
            SVVV PK+K+DHAW VY+ LN      DA+QVCEALL+LLV++  E+  +LA K
Sbjct: 447 GSVVVRPKRKLDHAWMVYSSLNEVPLEADAAQVCEALLTLLVQVEQERQQKLATK 501


>AT2G44970.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr2:18548999-18552019 REVERSE LENGTH=502
          Length = 502

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 5/60 (8%)

Query: 3   EIIEYIEETYWGSKKRVLLLGHSK-GVHAAAALSLYWYDLNE----IGIAQSPYGGTPIA 57
           EI EYIEE  WGS KRVLLLGHSK G+ AAAALSLYW +L +    + +AQSPYGG+PIA
Sbjct: 258 EIKEYIEELCWGSNKRVLLLGHSKGGIDAAAALSLYWPELKDKVAGLVLAQSPYGGSPIA 317



 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 7/55 (12%)

Query: 67  ASVVVGPKQKMDHAWTVYTPLN------DASQVCEALLSLLVEM-AEQSHELAIK 114
            SVVV PK+K+DHAW VY+ LN      DA+QVCEALL+LLV++  E+  +LA K
Sbjct: 446 GSVVVRPKRKLDHAWMVYSSLNEVPLEADAAQVCEALLTLLVQVEQERQQKLATK 500