Miyakogusa Predicted Gene
- Lj0g3v0141589.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0141589.1 Non Chatacterized Hit- tr|I1NLP1|I1NLP1_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,37.42,6e-18,INTEGRAL MEMBRANE FAMILY PROTEIN,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; A_tha_TIGR01569: p,CUFF.8642.1
(163 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03700.1 | Symbols: | Uncharacterised protein family (UPF049... 209 7e-55
AT4G03540.1 | Symbols: | Uncharacterised protein family (UPF049... 197 3e-51
AT5G44550.1 | Symbols: | Uncharacterised protein family (UPF049... 96 8e-21
AT5G15290.1 | Symbols: | Uncharacterised protein family (UPF049... 82 1e-16
AT1G14160.1 | Symbols: | Uncharacterised protein family (UPF049... 77 3e-15
AT4G25040.1 | Symbols: | Uncharacterised protein family (UPF049... 69 2e-12
AT2G36100.1 | Symbols: | Uncharacterised protein family (UPF049... 69 2e-12
AT4G20390.1 | Symbols: | Uncharacterised protein family (UPF049... 68 2e-12
AT4G15610.1 | Symbols: | Uncharacterised protein family (UPF049... 68 3e-12
AT2G27370.1 | Symbols: | Uncharacterised protein family (UPF049... 64 3e-11
AT5G06200.1 | Symbols: | Uncharacterised protein family (UPF049... 59 1e-09
AT3G06390.1 | Symbols: | Uncharacterised protein family (UPF049... 57 7e-09
AT4G15630.1 | Symbols: | Uncharacterised protein family (UPF049... 55 2e-08
AT3G11550.1 | Symbols: | Uncharacterised protein family (UPF049... 53 9e-08
AT1G17200.1 | Symbols: | Uncharacterised protein family (UPF049... 50 1e-06
>AT1G03700.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr1:921038-921844 FORWARD LENGTH=164
Length = 164
Score = 209 bits (532), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/160 (61%), Positives = 127/160 (79%)
Query: 4 TRWICHLLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTV 63
T+ + L++RF AF A L AVI M TS ER+SF IS AKY++ AFKYFVIAN++VTV
Sbjct: 5 TQRLGGLVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTV 64
Query: 64 YGFLVFFLPAESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDSVP 123
Y FLV FLP ESLLW+ VV +DL+ TMLL SS+SAA+ +A+VGK+GN+ A WLPIC VP
Sbjct: 65 YSFLVLFLPKESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVP 124
Query: 124 KFCDQVTGALIAGFIAVIVYMILLLHSIHSVLDPLLLRKT 163
+FCDQ+TGALIAG +A+++Y+ LL+ SIH V+DP LLRK+
Sbjct: 125 RFCDQITGALIAGLVALVLYVFLLIFSIHHVVDPFLLRKS 164
>AT4G03540.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr4:1570042-1571483 FORWARD LENGTH=164
Length = 164
Score = 197 bits (500), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/160 (67%), Positives = 135/160 (84%)
Query: 4 TRWICHLLVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTV 63
T+ I L++R AF A L+A+IVM TS ERASFLAIS EAKYT+ AFKYFVIAN+VV+V
Sbjct: 5 TKRIGGLVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSV 64
Query: 64 YGFLVFFLPAESLLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDSVP 123
Y FLV FLP ESLLW+ VV +DLV TMLL SS+SAAL +A+VGKKGN+ A WLPIC VP
Sbjct: 65 YSFLVLFLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVP 124
Query: 124 KFCDQVTGALIAGFIAVIVYMILLLHSIHSVLDPLLLRKT 163
KFCDQ+TGALIAGF+A+++Y++LLL+S+H+V+DP LL+K+
Sbjct: 125 KFCDQITGALIAGFVALVLYVLLLLYSLHAVVDPFLLQKS 164
>AT5G44550.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr5:17942100-17943174 REVERSE LENGTH=197
Length = 197
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 96/168 (57%), Gaps = 18/168 (10%)
Query: 8 CHLLV--RFLAFAATLSAVIVMATSHERASFL---------AISFEAKYTNTPAFKYFVI 56
C +L+ R LAF+ATLSA IVM + E +F+ +F AK+ +TPAF +FV+
Sbjct: 16 CKILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVV 75
Query: 57 ANSVVTVYGFL-----VFFLPAESLLWRL--VVAMDLVFTMLLISSISAALTIAEVGKKG 109
AN++V+ + L +F E +RL V +D++ L+ ++ +AA +AEVGK G
Sbjct: 76 ANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNG 135
Query: 110 NSYAAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLHSIHSVLDP 157
N +A W ICD +CD GALIA F VI+ +I+ SI ++ P
Sbjct: 136 NKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLVQP 183
>AT5G15290.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr5:4967094-4967846 FORWARD LENGTH=187
Length = 187
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 1 MAKTRWICHLLVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIAN 58
M++ I ++R +AF T+ + I+M T+HE F I F+A+Y + PA +FV+AN
Sbjct: 21 MSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVAN 80
Query: 59 SVVTVYGFLVFFLPAESLLWR-------LVVAMDLVFTMLLISSISAALTIAEVGKKGNS 111
+VV+ Y L L ++ R L++ +D+ LL S S+A I + GN+
Sbjct: 81 AVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNN 140
Query: 112 YAAWLPICDSVPKFCDQVTGALIAGF 137
W IC FC++++G+LI F
Sbjct: 141 KTNWFAICQQFNSFCERISGSLIGSF 166
>AT1G14160.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr1:4840798-4841660 REVERSE LENGTH=209
Length = 209
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 11 LVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVYGFLV 68
++R A T+ + + M T+HE L+ + + KY++ P +FV+AN++ G+LV
Sbjct: 54 VLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAISG--GYLV 111
Query: 69 FFLP--------AESLLWRLVV-AMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPIC 119
LP ++ R+++ +D V L+ S SAA + +GN+ A W PIC
Sbjct: 112 LSLPVSIFHIFSTQAKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTANWPPIC 171
Query: 120 DSVPKFCDQVTGALIAGFIAVIVYMILLLHS 150
FC++++G+LI F AVI+ M+++++S
Sbjct: 172 QQFDGFCERISGSLIGSFCAVILLMLIVINS 202
>AT4G25040.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr4:12868320-12869319 FORWARD LENGTH=170
Length = 170
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 12 VRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTVYGFLVFFL 71
+R L A ++++ VM T+ E AS I+FEAKY+ + AF+Y V A V
Sbjct: 21 MRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCAATLFTLVW 80
Query: 72 PAESLLWR-LVVAM---DLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDSVPKFCD 127
++ R LV A+ DL+ T+ IS+ SAA VGK GN A WLPIC V +C
Sbjct: 81 ACLAVRRRGLVFALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQAGWLPICGYVHGYCS 140
Query: 128 QVTGALIAGFIAVIVYMIL 146
+VT +L F + I+ IL
Sbjct: 141 RVTISLAMSFASFILLFIL 159
>AT2G36100.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr2:15159744-15160669 REVERSE LENGTH=206
Length = 206
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 7 ICHLLVRFLAFAATLSAVIVMATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVY 64
I L+R A A T+ A VM T+ E F + F+A Y + PAF+YFVIA +VV Y
Sbjct: 47 IFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASY 106
Query: 65 GFLVFFLP--------AESLLWRLVVAM-DLVFTMLLISSISAALTIAEVGKKGNSYAAW 115
LV LP ++ RL++ + D + L S+ +AA +I + GN W
Sbjct: 107 --LVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNW 164
Query: 116 LPICDSVPKFCDQVTGALIAGFIA 139
LPIC FC V+ A++A IA
Sbjct: 165 LPICQQFGDFCQNVSTAVVADSIA 188
>AT4G20390.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr4:11007068-11007869 FORWARD LENGTH=197
Length = 197
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 16/139 (11%)
Query: 6 WICHLLVRFLAFAATLSAVIVMATSHERASF---------LAISFEAKYTNTPAFKYFVI 56
W L +R AF ATL+A IVM+ + E + + + AK+ +TPAF +FVI
Sbjct: 16 WKLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVI 75
Query: 57 ANSVVTVYGFL-----VFFLPAESLLWRL--VVAMDLVFTMLLISSISAALTIAEVGKKG 109
AN +V+ + L +F E RL + +D++ L+ ++ +AA+ +AE+GK G
Sbjct: 76 ANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNG 135
Query: 110 NSYAAWLPICDSVPKFCDQ 128
N +A W +CD +CD
Sbjct: 136 NKHAKWNKVCDRFTTYCDH 154
>AT4G15610.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr4:8909162-8910641 FORWARD LENGTH=193
Length = 193
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 3 KTRWICHLLVRFLAFAATLSAVIVMATSHERAS-FLAISF----EAKYTNTPAFKYFVIA 57
K+ + +++RF+ FAATL++++VM TS + + FL + A++TN+PA YFV+A
Sbjct: 24 KSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVA 83
Query: 58 NSVVTVYGFLVFFLPAES---------LLWRLVVAMDLVFTMLLISSISAALTIAEVGKK 108
SV Y + F+ + LL L + MD V ++ S+ A +A +G K
Sbjct: 84 LSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAI-MDAVMVGIVASATGAGGGVAYLGLK 142
Query: 109 GNSYAAWLPICDSVPKFCDQVTGAL 133
GN W IC KFC V GA+
Sbjct: 143 GNKEVRWGKICHIYDKFCRHVGGAI 167
>AT2G27370.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr2:11708628-11709905 REVERSE LENGTH=221
Length = 221
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 39 ISFEAKYTNTPAFKYFVIANSVVTVYGFLVFFLPAE--SLLWRLVVA-------MDLVFT 89
+ F+A YT+ P FVI NS+V G+L LP +L L V D V
Sbjct: 95 LQFQADYTDLPTMSSFVIVNSIVG--GYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMM 152
Query: 90 MLLISSISAALTIAEVGKKGNSYAAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLH 149
L + + SA+ I + GNS + WLP+C FC +GA++A FIA + M L++
Sbjct: 153 GLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVIL 212
Query: 150 S 150
S
Sbjct: 213 S 213
>AT5G06200.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr5:1877333-1878116 FORWARD LENGTH=202
Length = 202
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 27 MATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVYGFLVFFLPAE--SLLWRLVV 82
M TS E F + FEA Y + P F++FV+A ++V G+LV LP +++ L V
Sbjct: 63 MGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVA--GYLVLSLPFSVVTIVRPLAV 120
Query: 83 AMDLVF-------TMLLISSISAALTIAEVGKKGNSYAAWLPICDSVPKFCDQVTGALIA 135
A L+ L ++ SAA I + GN+ WLPIC FC + +GA+++
Sbjct: 121 APRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVS 180
Query: 136 GFIAVIVYMILLLHSIHSVLDP 157
F +V IL++ S S+ P
Sbjct: 181 AFASVTFLAILVVISGVSLKRP 202
>AT3G06390.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr3:1938913-1939707 REVERSE LENGTH=199
Length = 199
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 9 HLLVRFLAFAATLSAVIVMATSH--ERASFLAIS----FEAKYTNTPAFKYFVIANSVVT 62
++ R L F+ATL+A+IVM TS E +S A++ ++PAF YFV+A V +
Sbjct: 38 DIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVAS 97
Query: 63 VYGFLVFFLPAESLLWR---------LVVAMDLVFTMLLISSISAALTIAEVGKKGNSYA 113
Y L+ L + SLL + + ++D+V +L S+ A +A + KGN
Sbjct: 98 FYA-LISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIALKGNEEV 156
Query: 114 AWLPICDSVPKFC 126
W IC+ KFC
Sbjct: 157 GWNKICNVYDKFC 169
>AT4G15630.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr4:8917527-8918683 FORWARD LENGTH=190
Length = 190
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 4 TRWICHLLVRFLAFAATLSAVIVMATSHERASF----------LAISFEAKYTNTPAFKY 53
+R L +R LA T+ A V+ + + L +S AK + AF Y
Sbjct: 23 SRKGLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVY 82
Query: 54 FVIANSVVTVYGFLVFFL-------PAESLLWRLVVAMDLVFTMLLISSISAALTIAEVG 106
+ AN++ Y + + ++SLL +++ DL+ LL SS AA I +G
Sbjct: 83 NISANAIACGYTAISIVIVMISKGKRSKSLLMAVLIG-DLMMVALLFSSTGAAGAIGLMG 141
Query: 107 KKGNSYAAWLPICDSVPKFCDQVTGALIAGFIAVIVYMILLLHSIHSVLDPLLL 160
+ GN + W +C KFC+Q ++ IA +V+M+L+ VLD L L
Sbjct: 142 RHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLV------VLDALKL 189
>AT3G11550.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr3:3638262-3639052 FORWARD LENGTH=204
Length = 204
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 26 VMATSHERASFLA--ISFEAKYTNTPAFKYFVIANSVVTVYGFLVFFLPAE--SLLWRLV 81
M TS E F + FEA Y + P F++FVIA ++V G+LV LP ++L L
Sbjct: 64 TMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVG--GYLVLSLPISVVTILRPLA 121
Query: 82 VAMDLVFTMLLISSIS-------AALTIAEVGKKGNSYAAWLPICDSVPKFCDQVTG 131
A L+ +L ++ +A I+ + GN WLPIC FC + +G
Sbjct: 122 TAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSG 178
>AT1G17200.1 | Symbols: | Uncharacterised protein family (UPF0497)
| chr1:5878493-5879871 FORWARD LENGTH=204
Length = 204
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 11 LVRFLAFAATLSAVIVMATSHERASFLAISFEAKYTNTPAFKYFVIANSVVTVYGFL--- 67
++R ++A++VM E F +IS Y+N AF+Y V AN + Y L
Sbjct: 36 MLRLAPVGLCVAALVVMLKDSETNEFGSIS----YSNLTAFRYLVHANGICAGYSLLSAA 91
Query: 68 VFFLPAES----LLWRLVVAMDLVFTMLLISSISAALTIAEVGKKGNSYAAWLPICDSVP 123
+ +P S +W +D + T L++++ + + + + G+S W C S
Sbjct: 92 IAAMPRSSSTMPRVWTFFC-LDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYG 150
Query: 124 KFCDQVTGALIAGFIAVIVYMILLL---HSIHSVLDP 157
FC + T ++I F V Y++L L + + + DP
Sbjct: 151 GFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDP 187