Miyakogusa Predicted Gene
- Lj0g3v0141269.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0141269.1 Non Chatacterized Hit- tr|I1LR43|I1LR43_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.78,0,FAMILY NOT
NAMED,NULL; no description,DNA-binding pseudobarrel domain;
DNA-binding pseudobarrel
doma,NODE_57917_length_2751_cov_12.026899.path2.1
(671 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 682 0.0
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 664 0.0
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 320 2e-87
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 231 9e-61
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 231 1e-60
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 218 1e-56
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 212 8e-55
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 212 8e-55
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 211 2e-54
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 210 2e-54
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 210 3e-54
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 210 3e-54
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 210 3e-54
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 209 5e-54
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 208 9e-54
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 204 1e-52
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 201 2e-51
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 199 5e-51
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 199 6e-51
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 199 7e-51
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 199 7e-51
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 199 7e-51
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 191 2e-48
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 189 8e-48
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 185 1e-46
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 184 2e-46
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 173 3e-43
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 172 9e-43
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 171 1e-42
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 167 3e-41
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 166 4e-41
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 166 4e-41
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 156 4e-38
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 156 5e-38
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 150 2e-36
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 130 3e-30
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 130 4e-30
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 115 7e-26
ATMG00940.1 | Symbols: ORF164 | DNA binding | chrM:251403-251897... 92 1e-18
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 57 3e-08
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 57 5e-08
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 56 6e-08
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 55 1e-07
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 55 2e-07
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 55 2e-07
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 52 1e-06
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 52 1e-06
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 50 6e-06
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/726 (54%), Positives = 470/726 (64%), Gaps = 91/726 (12%)
Query: 3 EGEKSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-SLPPFILCNVAA 61
E EKSLDPQLWHACAG MVQ+P +NS VFYF QGH EHAH D +PP ILC V +
Sbjct: 2 EQEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVPPLILCRVVS 61
Query: 62 VKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXX---------NSEKPASFAKTLTQ 112
VKF+AD ETDEVFAK+ L+PL + EKPASFAKTLTQ
Sbjct: 62 VKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQ 121
Query: 113 SDANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLT 152
SDANNGGGFSVPRYCAE I HGE WKFRHIYRGTPRRHLLT
Sbjct: 122 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLT 181
Query: 153 TGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXX 212
TGWSTFVNQKKL+AGDS+VFLR+E+G+L VGIRRAK+
Sbjct: 182 TGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSD------------- 228
Query: 213 XXXIGPYGAFSFFLREENKTL---------RNGCVGGGGDLSGRARVRPEAVIEAVTLAA 263
PY FS FLR++ T RNG G +GR RV EAV EAV AA
Sbjct: 229 ----NPYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRV--EAVAEAVARAA 282
Query: 264 SNQPFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIAS 323
Q FEVVYYPRASTPEFC+KA+ V++AMR++WCSGMRFKM FETEDSSRISWFMGT+++
Sbjct: 283 CGQAFEVVYYPRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSA 342
Query: 324 VQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLR 383
VQV DP+RWPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IH +PFS PRKK+R
Sbjct: 343 VQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFS-PRKKIR 401
Query: 384 FPQHPDFPLD-VRFP--TPTFSGNQLGPNVPLIC-LSDNAPASIQGARHAQIGISLSDIH 439
PQ +FP +FP +P F+ N G ++ + ++NAPA IQGAR AQ
Sbjct: 402 IPQPFEFPFHGTKFPIFSPGFANNGGGESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPS 461
Query: 440 LSNKLQLGLFPTNIQLHSG---ISNGNMTNH------DESKESLSCLLTMGKS--IKSLE 488
L + L L + N +LHS +S+ N +H E+ ++SC LTMG ++ +
Sbjct: 462 LLSDLNLSSYTGNNKLHSPAMFLSSFNPRHHHYQARDSENSNNISCSLTMGNPAMVQDKK 521
Query: 489 KSV-DVKKHQFLLFGQPILTEQQISNSCSREVLSHNNSGKNSLAVNEDKEKCFFDSPGKA 547
KSV VK HQF+LFGQPILTEQQ+ N + L +
Sbjct: 522 KSVGSVKTHQFVLFGQPILTEQQVMNRKRFLEEEAEAEEEKGLVA-------------RG 568
Query: 548 SSAEFSWQLGLDTGHCKVFLESEDVGRSLDLSCLGSYEELYMRLANLFGL-ERSEMLNHV 606
+ +S Q GL+TGHCKVF+ESEDVGR+LDLS +GSY+ELY +LA +F + ERS++L HV
Sbjct: 569 LTWNYSLQ-GLETGHCKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLTHV 627
Query: 607 LYRDATGAVKQTGEEPFSDFMKTAKRLTILTDSGSKSIR-AWITGTRNGEHGLDASNQTG 665
+YRDA G +K+ G+EPFSDFMK KRLTI D G ++R WITG R GE+G+DAS +TG
Sbjct: 628 VYRDANGVIKRIGDEPFSDFMKATKRLTIKMDIGGDNVRKTWITGIRTGENGIDASTKTG 687
Query: 666 PLSIFA 671
PLSIFA
Sbjct: 688 PLSIFA 693
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/687 (53%), Positives = 447/687 (65%), Gaps = 69/687 (10%)
Query: 1 MKEG-EKSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-SLPPFILCN 58
MK G EK LDPQLWHACAGGMV+MP +NS+VFYFPQGHAE+A+ VD +PP +LC
Sbjct: 8 MKGGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDFGNLPIPPMVLCR 67
Query: 59 VAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXX-----XXXXXXNSEKPASFAKTLTQS 113
V A+K+MAD E+DEVFAK+RL+PL++ NSEK SFAKTLTQS
Sbjct: 68 VLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQS 127
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
DANNGGGFSVPRYCAE I HG++WKFRHIYRGTPRRHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTT 187
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXX 213
GWS FVNQKKLVAGDS+VF+RAENG+L VGIRRAK+
Sbjct: 188 GWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNP--------- 238
Query: 214 XXIGPYGAFSFFLREE--NKTLRNGCVGGGGDLSGR-ARVRPEAVIEAVTLAASNQPFEV 270
IG +S LRE+ N R+ C L+ R +V E+VIEA TLA S +PFEV
Sbjct: 239 --IGGSCGYSSLLREDESNSLRRSNC-----SLADRKGKVTAESVIEAATLAISGRPFEV 291
Query: 271 VYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPV 330
VYYPRAST EFC+KA +AAMR+ WCSGMRFKM FETEDSSRISWFMGT+++V V DP+
Sbjct: 292 VYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPI 351
Query: 331 RWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLRFPQHPDF 390
RWPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I T FSPPRKK+R PQHPD+
Sbjct: 352 RWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDY 411
Query: 391 -PLDVRFPTPTFSGNQLGPNVPLICLSDNAPASIQGAR---HAQIGISLSDIHLSNKLQL 446
L P P+F N L + PL + DN P +QGAR H G+S SD+H L
Sbjct: 412 NNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLH-HYYLNR 470
Query: 447 GLFPTNIQLHSGISNGNMTNHDESKESLSCLLTMGKSIKSLEKSVDVKKHQFLLFGQPIL 506
P + + N D E C LTMG + + KS KK +LFG+ IL
Sbjct: 471 PPPPPPPSSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPCNDTKS---KKSHIVLFGKLIL 527
Query: 507 TEQQISNSCSREV-------LSHNNSGKNSLAVNEDKEKCFFDSPGKAS--SAEFSWQLG 557
E+Q+S S + +S S +N +A E F S + S S + G
Sbjct: 528 PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGRE------FSSSDEGSPCSKKVHDASG 581
Query: 558 LDTGHCKVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLERSEMLNHVLYRDATGAVKQ 617
L+TGHCKVF+ES+DVGR+LDLS LGSYEEL +L+++FG+++SEML+ VLYRDA+GA+K
Sbjct: 582 LETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEMLSSVLYRDASGAIKY 641
Query: 618 TGEEPFSDFMKTAKRLTILTDSGSKSI 644
G EPFS+F+KTA+RLTILT+ GS+S+
Sbjct: 642 AGNEPFSEFLKTARRLTILTEQGSESV 668
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/567 (35%), Positives = 285/567 (50%), Gaps = 68/567 (11%)
Query: 6 KSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRGSLPPFILCNVAAVKFM 65
+ +DP +W ACAG VQ+P ++SRV+YFPQGH EH + S + C + +++ +
Sbjct: 14 REVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPVPCIITSIQLL 73
Query: 66 ADPETDEVFAKMRLVPLRNSXXXXXXXX-----XXXXXNSEKPASFAKTLTQSDANNGGG 120
ADP TDEVFA + L P+ ++ K +FAK LT SDANNGGG
Sbjct: 74 ADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNGGG 133
Query: 121 FSVPRYCAEA--------------------IHGELWKFRHIYRGTPRRHLLTTGWSTFVN 160
FSVPR+CA++ IHG +W FRHIYRGTPRRHLLTTGWS FVN
Sbjct: 134 FSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVN 193
Query: 161 QKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYG 220
KKL+AGDSVVF+R E+++G+RR Y
Sbjct: 194 SKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNG------------YY 241
Query: 221 AFSFFLREEN----KTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRA 276
+ S +E++ KT R SG ++ EAV +A+ A+ PFEVV+YP A
Sbjct: 242 SQSSVAKEDDGSPKKTFRR---------SGNGKLTAEAVTDAINRASQGLPFEVVFYPAA 292
Query: 277 STPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASV-QVVDPVRWPNS 335
EF ++A V+++M + W G R KM ETEDSSRI+WF G ++S Q P W S
Sbjct: 293 GWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGP--WRGS 350
Query: 336 PWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLRFPQHPDFPL--- 392
PW+ LQ+ WDEP++LQNVKRV+PW VE+ ++ +H TPF PP K+L++PQ L
Sbjct: 351 PWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPF-PPAKRLKYPQPGGGFLSGD 408
Query: 393 --DVRFPTPTFSGNQLGPNVPLICLSDNAPASIQGARHAQIG-------ISLSDIHLSNK 443
++ +P S P + PA +QGAR G I + L
Sbjct: 409 DGEILYPQSGLSSAAAPDPSPSMFSYSTFPAGMQGARQYDFGSFNPTGFIGGNPPQLFTN 468
Query: 444 LQLGLFPTNIQLHSGISN-GNMTNHDESKESLSCLLTMGKSIKSLEKSVDVKKHQFLLFG 502
L P ++ + + N G+ + + S S + L+ G + + K + LFG
Sbjct: 469 NFLSPLPDLGKVSTEMMNFGSPPSDNLSPNSNTTNLSSGNDLVGNRGPLSKKVNSIQLFG 528
Query: 503 QPILTEQQISNSCSREVLSHNNSGKNS 529
+ I E+ + + L + K S
Sbjct: 529 KIITVEEHSESGPAESGLCEEDGSKES 555
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 197/412 (47%), Gaps = 109/412 (26%)
Query: 3 EGEKSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRG------SLPPF 54
EGEK L+ +LWHACAG +V +P SRV YFPQGH+E A TN ++ G SLPP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPAS-FAKTLTQS 113
++C + V AD ETDEV+A+M L PL S++P++ F KTLT S
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTAS 133
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE + H WKFRHI+RG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 193
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXX 213
GWS FV+ K+LVAGDSV+
Sbjct: 194 GWSVFVSAKRLVAGDSVI------------------------------------------ 211
Query: 214 XXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAA---------- 263
F+R E L G R RP+ ++ + L++
Sbjct: 212 -----------FIRNEKNQLFLGI---------RHATRPQTIVPSSVLSSDSMHIGLLAA 251
Query: 264 ------SNQPFEVVYYPRASTPEFCIKASA-VKAAMRVQWCSGMRFKMPFETEDSSRISW 316
+N F V ++PRAS EF I+ S +KA + GMRF+M FETE+SS +
Sbjct: 252 AAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRR 310
Query: 317 FMGTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMP 368
+MGTI + +D VRWPNS WR ++V WDE + RVS W +E ++ P
Sbjct: 311 YMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 197/412 (47%), Gaps = 109/412 (26%)
Query: 3 EGEKSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRG------SLPPF 54
EGEK L+ +LWHACAG +V +P SRV YFPQGH+E A TN ++ G SLPP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPAS-FAKTLTQS 113
++C + V AD ETDEV+A+M L PL S++P++ F KTLT S
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTAS 133
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE + H WKFRHI+RG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 193
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXX 213
GWS FV+ K+LVAGDSV+
Sbjct: 194 GWSVFVSAKRLVAGDSVI------------------------------------------ 211
Query: 214 XXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAA---------- 263
F+R E L G R RP+ ++ + L++
Sbjct: 212 -----------FIRNEKNQLFLGI---------RHATRPQTIVPSSVLSSDSMHIGLLAA 251
Query: 264 ------SNQPFEVVYYPRASTPEFCIKASA-VKAAMRVQWCSGMRFKMPFETEDSSRISW 316
+N F V ++PRAS EF I+ S +KA + GMRF+M FETE+SS +
Sbjct: 252 AAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRR 310
Query: 317 FMGTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMP 368
+MGTI + +D VRWPNS WR ++V WDE + RVS W +E ++ P
Sbjct: 311 YMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 191/409 (46%), Gaps = 89/409 (21%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEH-AHTNVDLRGSLPPF-----ILCNVAAVKF 64
+LWHACAG + +P+ + V YFPQGH E A + +P F I+C V V+
Sbjct: 65 ELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKFDLNPQIVCRVVNVQL 124
Query: 65 MADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEK-----------PASFAKTLTQS 113
+A+ +TDEV+ ++ L+PL+ E+ P F KTLT S
Sbjct: 125 LANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTAS 184
Query: 114 DANNGGGFSVPRYCAEA--------------------IHGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE +HG WKFRHIYRG PRRHLLTT
Sbjct: 185 DTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTT 244
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXX 213
GWS FV+QK LV+GD+V+FLR E GEL +GIRRA +
Sbjct: 245 GWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAAR------------------------ 280
Query: 214 XXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQP-FEVVY 272
P + E +N C ++ V A S + F V Y
Sbjct: 281 ----PRNGLPDSIIE-----KNSCSN---------------ILSLVANAVSTKSMFHVFY 316
Query: 273 YPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRW 332
PRA+ EF I ++R C G RF+M FE +DS G + V +DP RW
Sbjct: 317 SPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPE-RRCAGVVTGVCDLDPYRW 375
Query: 333 PNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKK 381
PNS WR L V WDE + + +RVSPW ++ ++P H + S PR K
Sbjct: 376 PNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HLSIQSSPRPK 422
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 186/396 (46%), Gaps = 91/396 (22%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTN---VDLR---GSLPPFILCNVAAV 62
+LW ACAG +V++P+ RVFYFPQGH E A TN VD +LPP ILC V +V
Sbjct: 21 ELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSV 80
Query: 63 KFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASFAKTLTQSDANNGGGFS 122
A+ ETDEV+A++ L P + SF K LT SD + GGFS
Sbjct: 81 TLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFS 140
Query: 123 VPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQK 162
V R A +HG W+F+HI+RG PRRHLLTTGWSTFV K
Sbjct: 141 VLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 200
Query: 163 KLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYGAF 222
+LVAGD+ VFLR E G+L VG+RR K P
Sbjct: 201 RLVAGDAFVFLRGETGDLRVGVRRLAKQQSTM-----------------------PASVI 237
Query: 223 SFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTPEFC 282
S ++++R G + AVT + F V Y PR S +F
Sbjct: 238 S------SQSMRLGVLATAS--------------HAVT---TTTIFVVFYKPRIS--QFI 272
Query: 283 IKASAVKAAMRVQWCSGMRFKMPFETEDS-SRISWFMGTIASVQVVDPVRWPNSPWRLLQ 341
I + AM+ + GMR++M FE E+S RI F GTI + +WP S WR LQ
Sbjct: 273 ISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTIIGSGDLSS-QWPASKWRSLQ 329
Query: 342 VNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSP 377
+ WDEP +Q +VSPW +E PFSP
Sbjct: 330 IQWDEPSSIQRPNKVSPWEIE-----------PFSP 354
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 188/402 (46%), Gaps = 91/402 (22%)
Query: 5 EKSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTN---VDLR---GSLPPFIL 56
+ L +LW ACAG +V++P+ RVFYFPQGH E A TN VD +LPP IL
Sbjct: 36 DDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKIL 95
Query: 57 CNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASFAKTLTQSDAN 116
C V +V A+ ETDEV+A++ L P + SF K LT SD +
Sbjct: 96 CRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTS 155
Query: 117 NGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWS 156
GGFSV R A +HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 156 THGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWS 215
Query: 157 TFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXI 216
TFV K+LVAGD+ VFLR E G+L VG+RR K
Sbjct: 216 TFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTM---------------------- 253
Query: 217 GPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRA 276
P S ++++R G + AVT + F V Y PR
Sbjct: 254 -PASVIS------SQSMRLGVLATAS--------------HAVT---TTTIFVVFYKPRI 289
Query: 277 STPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDS-SRISWFMGTIASVQVVDPVRWPNS 335
S +F I + AM+ + GMR++M FE E+S RI F GTI + +WP S
Sbjct: 290 S--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTIIGSGDLSS-QWPAS 344
Query: 336 PWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSP 377
WR LQ+ WDEP +Q +VSPW +E PFSP
Sbjct: 345 KWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSP 375
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 187/416 (44%), Gaps = 83/416 (19%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRGSLPPFILCNVAAVKFMADPET 70
+LWHACAG ++ +P+ S V YFPQGH E A LPP + C + VK A+ T
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAAIYGLPPHVFCRILDVKLHAETTT 113
Query: 71 DEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEK----------PASFAKTLTQSDANNGGG 120
DEV+A++ L+P E+ P F KTLT SD + GG
Sbjct: 114 DEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGG 173
Query: 121 FSVPRYCAEA--------------------IHGELWKFRHIYRGTPRRHLLTTGWSTFVN 160
FSVPR AE +HG W+FRHIYRG PRRHLLTTGWS FVN
Sbjct: 174 FSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVN 233
Query: 161 QKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYG 220
+KKLV+GD+V+FLR ++G+L +G+RRA + I +
Sbjct: 234 KKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHAISTHS 293
Query: 221 AFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTPE 280
FS P+A + A + +VV YP
Sbjct: 294 VFSI------------------------SYNPKASWSNFIIPAP-KFLKVVDYP------ 322
Query: 281 FCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLL 340
FCI GMRFK E+ED+S G I+ + +DP+RWP S WR L
Sbjct: 323 FCI---------------GMRFKARVESEDASE-RRSPGIISGISDLDPIRWPGSKWRCL 366
Query: 341 QVNWDEPDLLQNVKRVSPWLVE---LVSNMPAIHFTPFSPPRKKLRFPQ-HPDFPL 392
V WD+ + +RVSPW +E +SN + F P R ++ F PD P+
Sbjct: 367 LVRWDDIVANGHQQRVSPWEIEPSGSISNSGS--FVTTGPKRSRIGFSSGKPDIPV 420
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 200/696 (28%), Positives = 289/696 (41%), Gaps = 154/696 (22%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRGSLPPF-----ILCNVAAVK 63
+LWHACAG +V +P+ RV+YFP+GH E A + L +P F ILC V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASFAKTLTQSDANNGGGFSV 123
A+PETDEV+A++ L+P + SF KTLT SD + GGFSV
Sbjct: 82 RRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141
Query: 124 PR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKK 163
R A +H W FRHI+RG PRRHLLTTGWS FV+ KK
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201
Query: 164 LVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYGAFS 223
LVAGD+ +FLR EN EL VG+RR + I FS
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261
Query: 224 FFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTPEFCI 283
F + R E ++ V Y A T + +
Sbjct: 262 VFYKPRTS-------------------RSEFIV------------SVNRYLEAKTQKLSV 290
Query: 284 KASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLLQVN 343
MR FKM FE E++ F GTI VQ W +S WR L+V
Sbjct: 291 -------GMR--------FKMRFEGEEAPEKR-FSGTIVGVQENKSSVWHDSEWRSLKVQ 334
Query: 344 WDEPDLLQNVKRVSPWLVE-LVSNMPAIHFTPFSPPRKKLRFPQHPDFPLDVRFPTPTFS 402
WDEP + +RVSPW +E LV+N TP S P+ PQ P P+P
Sbjct: 335 WDEPSSVFRPERVSPWELEPLVANS-----TPSSQPQP----PQRNKRPRPPGLPSPA-- 383
Query: 403 GNQLGPNVPLICLSDNAPASI----QGARHAQIGISLSDIHLSNKLQLGLFPTNIQLHSG 458
GP+ + + P+S+ A+ A G H NK G
Sbjct: 384 ---TGPSDGVWKSPADTPSSVPLFSPPAKAATFG------HGGNK------------SFG 422
Query: 459 ISNGNM---TNHDESKESLSCLLTMGKSIKSLEKSVDVKKHQFLLFGQPILTEQQISNSC 515
+S G+ TN D + ES + +S + + + +V + LFG ++ +
Sbjct: 423 VSIGSAFWPTNADSAAESFASAFN-NESTEKKQTNGNVCR----LFGFELVENVNVDECF 477
Query: 516 SREVLS------------HNNSGKNS--LAVNE--------DKEKCFFDSPGKASSAEFS 553
S +S +SG+ S L +N+ D EK SP ++ S +
Sbjct: 478 SAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIR 537
Query: 554 WQLGLDTGHCKVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLERSEMLN-----HVLY 608
KV ++ VGR++DL+ YE+L+ +L +F + + E+L V+Y
Sbjct: 538 -------SCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDI-KGELLESTKKWQVVY 589
Query: 609 RDATGAVKQTGEEPFSDFMKTAKRLTILTDSGSKSI 644
D + G++P+++F +++ I T K +
Sbjct: 590 TDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 625
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 195/419 (46%), Gaps = 80/419 (19%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRGSLP------P 53
EGEK L+ +LWHACAG +V +P V SRV YFPQGH+E A TN ++ +P P
Sbjct: 14 EGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHP 73
Query: 54 FILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPAS-FAKTLTQ 112
++C + V AD ETDEV+A+M L PL S +P + F KTLT
Sbjct: 74 QLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTA 133
Query: 113 SDANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLT 152
SD + GGFSVPR AE + H WKFRHI+RG P+RHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 193
Query: 153 TGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXX 212
TGWS FV+ K+LVAGDSV+F+ + +L +GIRRA +
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253
Query: 213 XXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVY 272
F+ F R P + + LA + VY
Sbjct: 254 AHAAATNSRFTIFY--------------------NPRASPSEFV--IPLAKY---VKAVY 288
Query: 273 YPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRW 332
+ R V MR F+M FETE+SS + +MGTI + +DP RW
Sbjct: 289 HTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGICDLDPTRW 327
Query: 333 PNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLRFPQHPDFP 391
NS WR ++V WDE + RVS W +E ++ P ++ +PF +L+ P P P
Sbjct: 328 ANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPFP---LRLKRPWPPGLP 382
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 197/692 (28%), Positives = 284/692 (41%), Gaps = 141/692 (20%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRGSLPPF-----ILCNVAAVK 63
+LWHACAG +V +P+ RV+YFP+GH E A + L +P F ILC V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASFAKTLTQSDANNGGGFSV 123
A+PETDEV+A++ L+P + SF KTLT SD + GGFSV
Sbjct: 82 RRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141
Query: 124 PR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKK 163
R A +H W FRHI+RG PRRHLLTTGWS FV+ KK
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201
Query: 164 LVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYGAFS 223
LVAGD+ +FLR EN EL VG+RR + I FS
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261
Query: 224 FFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTPEFCI 283
F + R E ++ V Y A T + +
Sbjct: 262 VFYKPRTS-------------------RSEFIV------------SVNRYLEAKTQKLSV 290
Query: 284 KASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLLQVN 343
MR FKM FE E++ F GTI VQ W +S WR L+V
Sbjct: 291 -------GMR--------FKMRFEGEEAPEKR-FSGTIVGVQENKSSVWHDSEWRSLKVQ 334
Query: 344 WDEPDLLQNVKRVSPWLVE-LVSNMPAIHFTPFSPPRKKLRFPQHPDFPLDVRFPTPTFS 402
WDEP + +RVSPW +E LV+N TP S P+ PQ P P+P
Sbjct: 335 WDEPSSVFRPERVSPWELEPLVANS-----TPSSQPQP----PQRNKRPRPPGLPSPA-- 383
Query: 403 GNQLGPNVPLICLSDNAPASIQGARHAQIGISLSDIHLSNKLQLGLFPTNIQLHSGISNG 462
GP + P + G + S S + F G+S G
Sbjct: 384 ---TGP---------SGPVTPDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIG 431
Query: 463 NM---TNHDESKESLSCLLTMGKSIKSLEKSVDVKKHQFLLFGQPILTEQQISNSCSREV 519
+ TN D + ES + +S + + + +V + LFG ++ + S
Sbjct: 432 SAFWPTNADSAAESFASAFN-NESTEKKQTNGNVCR----LFGFELVENVNVDECFSAAS 486
Query: 520 LS------------HNNSGKNS--LAVNE--------DKEKCFFDSPGKASSAEFSWQLG 557
+S +SG+ S L +N+ D EK SP ++ S +
Sbjct: 487 VSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIR---- 542
Query: 558 LDTGHCKVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLERSEMLN-----HVLYRDAT 612
KV ++ VGR++DL+ YE+L+ +L +F + + E+L V+Y D
Sbjct: 543 ---SCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDI-KGELLESTKKWQVVYTDDE 598
Query: 613 GAVKQTGEEPFSDFMKTAKRLTILTDSGSKSI 644
+ G++P+++F +++ I T K +
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 197/692 (28%), Positives = 284/692 (41%), Gaps = 141/692 (20%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRGSLPPF-----ILCNVAAVK 63
+LWHACAG +V +P+ RV+YFP+GH E A + L +P F ILC V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASFAKTLTQSDANNGGGFSV 123
A+PETDEV+A++ L+P + SF KTLT SD + GGFSV
Sbjct: 82 RRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141
Query: 124 PR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKK 163
R A +H W FRHI+RG PRRHLLTTGWS FV+ KK
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201
Query: 164 LVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYGAFS 223
LVAGD+ +FLR EN EL VG+RR + I FS
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261
Query: 224 FFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTPEFCI 283
F + R E ++ V Y A T + +
Sbjct: 262 VFYKPRTS-------------------RSEFIV------------SVNRYLEAKTQKLSV 290
Query: 284 KASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLLQVN 343
MR FKM FE E++ F GTI VQ W +S WR L+V
Sbjct: 291 -------GMR--------FKMRFEGEEAPEKR-FSGTIVGVQENKSSVWHDSEWRSLKVQ 334
Query: 344 WDEPDLLQNVKRVSPWLVE-LVSNMPAIHFTPFSPPRKKLRFPQHPDFPLDVRFPTPTFS 402
WDEP + +RVSPW +E LV+N TP S P+ PQ P P+P
Sbjct: 335 WDEPSSVFRPERVSPWELEPLVANS-----TPSSQPQP----PQRNKRPRPPGLPSPA-- 383
Query: 403 GNQLGPNVPLICLSDNAPASIQGARHAQIGISLSDIHLSNKLQLGLFPTNIQLHSGISNG 462
GP + P + G + S S + F G+S G
Sbjct: 384 ---TGP---------SGPVTPDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIG 431
Query: 463 NM---TNHDESKESLSCLLTMGKSIKSLEKSVDVKKHQFLLFGQPILTEQQISNSCSREV 519
+ TN D + ES + +S + + + +V + LFG ++ + S
Sbjct: 432 SAFWPTNADSAAESFASAFN-NESTEKKQTNGNVCR----LFGFELVENVNVDECFSAAS 486
Query: 520 LS------------HNNSGKNS--LAVNE--------DKEKCFFDSPGKASSAEFSWQLG 557
+S +SG+ S L +N+ D EK SP ++ S +
Sbjct: 487 VSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIR---- 542
Query: 558 LDTGHCKVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLERSEMLN-----HVLYRDAT 612
KV ++ VGR++DL+ YE+L+ +L +F + + E+L V+Y D
Sbjct: 543 ---SCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDI-KGELLESTKKWQVVYTDDE 598
Query: 613 GAVKQTGEEPFSDFMKTAKRLTILTDSGSKSI 644
+ G++P+++F +++ I T K +
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 202/699 (28%), Positives = 292/699 (41%), Gaps = 158/699 (22%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRGSLPPF-----ILCNVAAVK 63
+LWHACAG +V +P+ RV+YFP+GH E A + L +P F ILC V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASFAKTLTQSDANNGGGFSV 123
A+PETDEV+A++ L+P + SF KTLT SD + GGFSV
Sbjct: 82 RRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141
Query: 124 PR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKK 163
R A +H W FRHI+RG PRRHLLTTGWS FV+ KK
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201
Query: 164 LVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYGAFS 223
LVAGD+ +FLR EN EL VG+RR + I FS
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261
Query: 224 FFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTPEFCI 283
F + R E ++ V Y A T + +
Sbjct: 262 VFYKPRTS-------------------RSEFIV------------SVNRYLEAKTQKLSV 290
Query: 284 KASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLLQVN 343
MR FKM FE E++ F GTI VQ W +S WR L+V
Sbjct: 291 -------GMR--------FKMRFEGEEAPEKR-FSGTIVGVQENKSSVWHDSEWRSLKVQ 334
Query: 344 WDEPDLLQNVKRVSPWLVE-LVSNMPAIHFTPFS---PPRKKLRFPQHPDFPLDVRFPTP 399
WDEP + +RVSPW +E LV+N TP S PP++ R P+ P P P+
Sbjct: 335 WDEPSSVFRPERVSPWELEPLVANS-----TPSSQPQPPQRNKR-PRPPGLPSPATGPS- 387
Query: 400 TFSGNQLGPNVPLICLSDNAPASI----QGARHAQIGISLSDIHLSNKLQLGLFPTNIQL 455
GP+ +D P+S+ A+ A G H NK
Sbjct: 388 -------GPDGVWKSPAD-TPSSVPLFSPPAKAATFG------HGGNK------------ 421
Query: 456 HSGISNGNM---TNHDESKESLSCLLTMGKSIKSLEKSVDVKKHQFLLFGQPILTEQQIS 512
G+S G+ TN D + ES + +S + + + +V + LFG ++ +
Sbjct: 422 SFGVSIGSAFWPTNADSAAESFASAFN-NESTEKKQTNGNVCR----LFGFELVENVNVD 476
Query: 513 NSCSREVLS------------HNNSGKNS--LAVNE--------DKEKCFFDSPGKASSA 550
S +S +SG+ S L +N+ D EK SP ++ S
Sbjct: 477 ECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSR 536
Query: 551 EFSWQLGLDTGHCKVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLERSEMLN-----H 605
+ KV ++ VGR++DL+ YE+L+ +L +F + + E+L
Sbjct: 537 QIR-------SCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDI-KGELLESTKKWQ 588
Query: 606 VLYRDATGAVKQTGEEPFSDFMKTAKRLTILTDSGSKSI 644
V+Y D + G++P+++F +++ I T K +
Sbjct: 589 VVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 627
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 194/418 (46%), Gaps = 80/418 (19%)
Query: 4 GEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRGSLP------PF 54
GEK L+ +LWHACAG +V +P V SRV YFPQGH+E A TN ++ +P P
Sbjct: 17 GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 76
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPAS-FAKTLTQS 113
++C + V AD ETDEV+A+M L PL S +P + F KTLT S
Sbjct: 77 LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTAS 136
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE + H WKFRHI+RG P+RHLLTT
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTT 196
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXX 213
GWS FV+ K+LVAGDSV+F+ + +L +GIRRA +
Sbjct: 197 GWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 256
Query: 214 XXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYY 273
F+ F R P + + LA + VY+
Sbjct: 257 HAAATNSRFTIFY--------------------NPRASPSEFV--IPLAKY---VKAVYH 291
Query: 274 PRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWP 333
R V MR F+M FETE+SS + +MGTI + +DP RW
Sbjct: 292 TR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGICDLDPTRWA 330
Query: 334 NSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLRFPQHPDFP 391
NS WR ++V WDE + RVS W +E ++ P ++ +PF +L+ P P P
Sbjct: 331 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPFP---LRLKRPWPPGLP 384
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 185/401 (46%), Gaps = 87/401 (21%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAEH--AHTNVDLRG------SLPPFILCNVAAV 62
+LW CAG +V++P+ RVFYFPQGH E A TN + LPP ILC V V
Sbjct: 25 ELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDV 84
Query: 63 KFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASFAKTLTQSDANNGGGFS 122
A+ ETDEV+A++ L P + ++ SF K LT SD + GGFS
Sbjct: 85 TLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFS 144
Query: 123 VPRYCAEA--------------------IHGELWKFRHIYRGTPRRHLLTTGWSTFVNQK 162
V R A +HG W+F+HI+RG PRRHLLTTGWSTFV+ K
Sbjct: 145 VLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSK 204
Query: 163 KLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYGAF 222
+LVAGD+ VFLR ENG+L VG+RR
Sbjct: 205 RLVAGDAFVFLRGENGDLRVGVRR------------------------------------ 228
Query: 223 SFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYY-PRASTPEF 281
L T+ + G V+ + A VV+Y PR S +F
Sbjct: 229 ---LARHQSTMPTSVISSQSMHLG--------VLATASHAVRTTTIFVVFYKPRIS--QF 275
Query: 282 CIKASAVKAAMRVQWCSGMRFKMPFETEDS-SRISWFMGTIASVQVVDPVRWPNSPWRLL 340
+ + A++ + G RF+M FE E+S RI F GTI + +WP S WR L
Sbjct: 276 IVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERI--FTGTIVGSGDLS-SQWPASKWRSL 332
Query: 341 QVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKK 381
QV WDEP +Q +VSPW +E P + +P S P ++
Sbjct: 333 QVQWDEPTTVQRPDKVSPWEIE-----PFLATSPISTPAQQ 368
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 198/686 (28%), Positives = 289/686 (42%), Gaps = 125/686 (18%)
Query: 4 GEKSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTN---VDLRGS-----LPPFI 55
G + L +LW CAG +V +PQ RV+YFPQGH E + VDL LPP I
Sbjct: 5 GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKI 64
Query: 56 LCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQS 113
LCNV V A+ +TDEV+A++ L+P+ + ++P SF+K LT S
Sbjct: 65 LCNVMNVSLQAEKDTDEVYAQITLIPV-GTEVDEPMSPDPSPPELQRPKVHSFSKVLTAS 123
Query: 114 DANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTT 153
D + GGFSV R AE +HG WKF+HI+RG PRRHLLTT
Sbjct: 124 DTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTT 183
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXX 213
GWSTFV K+LVA G+ +V
Sbjct: 184 GWSTFVTSKRLVA-----------GDTFV------------------------------- 201
Query: 214 XXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPE------AVIEAVTLAASNQP 267
FLR EN LR G S V+ A +
Sbjct: 202 -----------FLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKT 250
Query: 268 FEVVYY-PRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQV 326
+VYY PR S +F I + AM ++ GMRFKM FE EDS + GT+ V+
Sbjct: 251 MFIVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVKD 307
Query: 327 VDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLRFPQ 386
P W +S WR L+V+WDEP + +VSPW +E N + P S K R Q
Sbjct: 308 CSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENV---PKSVMLKNKRPRQ 363
Query: 387 HPDF-PLDVRFPTPTFSGNQLGP--NVPLICLSDNAPASIQGARHAQIGISLSDIHLSNK 443
+ LDV + L C++ + Q R A SD L+N
Sbjct: 364 VSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQWSSPQQCHRDANEDAKKSDW-LNNS 422
Query: 444 LQLGLFPTNIQLHSGISNGNMTNHDESK-ESLSCLLTMGKSIKSLEKSVDVKKHQFLLFG 502
+ +N+ S +++ ++ ++ K E+ + G + S +V +K +
Sbjct: 423 YSV----SNVAKDSTLNDQMVSPVEQKKPETTANYRLFGIDLMSSSLAVPEEKTAPM--- 475
Query: 503 QPILTEQQISNSCSREVLSHNNSGKNSLAVNEDKEKCFFDSPGKASSAEF-SWQLGLDTG 561
+PI N + SH++ V+E+K++ P + S E S Q
Sbjct: 476 RPI-------NISKPTMDSHSDPKSEISKVSEEKKQ----EPAEGSPKEVQSKQSSSTRS 524
Query: 562 HCKVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLE---RSEMLNHVLYRDATGAVKQT 618
KV ++ VGR++DL+ L Y EL + LF ++ RS +++ D G +
Sbjct: 525 RTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLV 584
Query: 619 GEEPFSDFMKTAKRLTILTDSGSKSI 644
G++P+ +F KR+ I + K +
Sbjct: 585 GDDPWPEFCNMVKRIFIWSKEEVKKM 610
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 175/396 (44%), Gaps = 99/396 (25%)
Query: 8 LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEH--------AHTNVDLRGSLPPFILCNV 59
++ +LWHACAG +V +PQV S V+YF QGH+E A T V +LP ++C V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 60 AAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASF-AKTLTQSDANNG 118
V AD ++DE++A+M L P+ + S+ P F KTLT SD +
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTH 170
Query: 119 GGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTTGWSTF 158
GGFSVPR AE + H W FRHIYRG P+RHLLTTGWS F
Sbjct: 171 GGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLF 230
Query: 159 VNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGP 218
V K+ LRA
Sbjct: 231 VGSKR---------LRA------------------------------------------- 238
Query: 219 YGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTL-----------AASNQP 267
G F+R+E L G + + P +V+ A ++ A+ P
Sbjct: 239 -GDSVLFIRDEKSQLMVGVRRA----NRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 293
Query: 268 FEVVYYPRASTPEFCIK-ASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQV 326
F + Y PRA EF I A KA Q GMRF M FETEDS + +MGTI +
Sbjct: 294 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVGISD 352
Query: 327 VDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVE 362
+DP+RWP S WR LQV WDEP RVSPW +E
Sbjct: 353 LDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 185/422 (43%), Gaps = 103/422 (24%)
Query: 4 GEKSLDPQ------LWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------S 50
E++LDP+ LWHACAG +V +P+ + RVFYFPQGH E + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 51 LPPFILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSE-KPASFAKT 109
LP +LC V V A+ +TDEV+A++ L+P N + SF KT
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKT 167
Query: 110 LTQSDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRH 149
LT SD + GGFSV R A+ +H W+FRHI+RG PRRH
Sbjct: 168 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRH 227
Query: 150 LLTTGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXX 209
LL +GWS FV+ K+LVAGD+ +
Sbjct: 228 LLQSGWSVFVSSKRLVAGDAFI-------------------------------------- 249
Query: 210 XXXXXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTL-------- 261
FLR EN LR VG + + V P +VI + ++
Sbjct: 250 ---------------FLRGENGELR---VGVRRAMRQQGNV-PSSVISSHSMHLGVLATA 290
Query: 262 ---AASNQPFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFM 318
++ F V Y PR S EF + +++ + GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 319 GTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPP 378
GTI ++ DP RWP S WR L+V WDE + RVSPW VE PA+ P P
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRP 409
Query: 379 RK 380
++
Sbjct: 410 KR 411
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 185/422 (43%), Gaps = 103/422 (24%)
Query: 4 GEKSLDPQ------LWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------S 50
E++LDP+ LWHACAG +V +P+ + RVFYFPQGH E + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 51 LPPFILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSE-KPASFAKT 109
LP +LC V V A+ +TDEV+A++ L+P N + SF KT
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKT 167
Query: 110 LTQSDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRH 149
LT SD + GGFSV R A+ +H W+FRHI+RG PRRH
Sbjct: 168 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRH 227
Query: 150 LLTTGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXX 209
LL +GWS FV+ K+LVAGD+ +
Sbjct: 228 LLQSGWSVFVSSKRLVAGDAFI-------------------------------------- 249
Query: 210 XXXXXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTL-------- 261
FLR EN LR VG + + V P +VI + ++
Sbjct: 250 ---------------FLRGENGELR---VGVRRAMRQQGNV-PSSVISSHSMHLGVLATA 290
Query: 262 ---AASNQPFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFM 318
++ F V Y PR S EF + +++ + GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 319 GTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPP 378
GTI ++ DP RWP S WR L+V WDE + RVSPW VE PA+ P P
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRP 409
Query: 379 RK 380
++
Sbjct: 410 KR 411
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 185/422 (43%), Gaps = 103/422 (24%)
Query: 4 GEKSLDPQ------LWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------S 50
E++LDP+ LWHACAG +V +P+ + RVFYFPQGH E + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 51 LPPFILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSE-KPASFAKT 109
LP +LC V V A+ +TDEV+A++ L+P N + SF KT
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKT 167
Query: 110 LTQSDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRH 149
LT SD + GGFSV R A+ +H W+FRHI+RG PRRH
Sbjct: 168 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRH 227
Query: 150 LLTTGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXX 209
LL +GWS FV+ K+LVAGD+ +
Sbjct: 228 LLQSGWSVFVSSKRLVAGDAFI-------------------------------------- 249
Query: 210 XXXXXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTL-------- 261
FLR EN LR VG + + V P +VI + ++
Sbjct: 250 ---------------FLRGENGELR---VGVRRAMRQQGNV-PSSVISSHSMHLGVLATA 290
Query: 262 ---AASNQPFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFM 318
++ F V Y PR S EF + +++ + GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 319 GTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPP 378
GTI ++ DP RWP S WR L+V WDE + RVSPW VE PA+ P P
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRP 409
Query: 379 RK 380
++
Sbjct: 410 KR 411
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 185/422 (43%), Gaps = 103/422 (24%)
Query: 4 GEKSLDPQ------LWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------S 50
E++LDP+ LWHACAG +V +P+ + RVFYFPQGH E + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 51 LPPFILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSE-KPASFAKT 109
LP +LC V V A+ +TDEV+A++ L+P N + SF KT
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKT 167
Query: 110 LTQSDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRH 149
LT SD + GGFSV R A+ +H W+FRHI+RG PRRH
Sbjct: 168 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRH 227
Query: 150 LLTTGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXX 209
LL +GWS FV+ K+LVAGD+ +
Sbjct: 228 LLQSGWSVFVSSKRLVAGDAFI-------------------------------------- 249
Query: 210 XXXXXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTL-------- 261
FLR EN LR VG + + V P +VI + ++
Sbjct: 250 ---------------FLRGENGELR---VGVRRAMRQQGNV-PSSVISSHSMHLGVLATA 290
Query: 262 ---AASNQPFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFM 318
++ F V Y PR S EF + +++ + GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 319 GTIASVQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPP 378
GTI ++ DP RWP S WR L+V WDE + RVSPW VE PA+ P P
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRP 409
Query: 379 RK 380
++
Sbjct: 410 KR 411
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 185/667 (27%), Positives = 276/667 (41%), Gaps = 141/667 (21%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRG-----SLPPFILCNVAAVK 63
QLW CAG + +P++ +V+YFPQG+ E A T +L LP + C V A+
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQSDANNGGGF 121
+ +DE +AK+ L+P N +P SF K LT SD + G F
Sbjct: 87 LKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASDISANGVF 146
Query: 122 SVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQ 161
SVP+ A +HG W FRH YRGTP+RHLLTTGW+ F
Sbjct: 147 SVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTS 206
Query: 162 KKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPYGA 221
KKLV GD +VF+R E GEL VGIRRA+ P
Sbjct: 207 KKLVKGDVIVFVRGETGELRVGIRRARHQQGNI-----------------------PSSI 243
Query: 222 FSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQ-PFEVVYYPRASTPE 280
S +R+G + A NQ F VVY PR+S +
Sbjct: 244 VSI------DCMRHGVIASAKH------------------AFDNQCMFIVVYKPRSS--Q 277
Query: 281 FCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLL 340
F + A+ ++ G RF M FE +D S +F GTI V P W S WR L
Sbjct: 278 FIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYF-GTIIGVSNFSP-HWKCSDWRSL 335
Query: 341 QVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLRFPQHPDFPLDVRFPTPT 400
+V WDE +VSPW +E + MPA++ P S K R + +F
Sbjct: 336 EVQWDEFASFLRPNKVSPWEIEHL--MPALN-VPRSSFLKNKRLREVNEF---------G 383
Query: 401 FSGNQLGPNVPLICLSDNAPASIQGARHAQIGISLSDIHLS----NKLQLGLFPTNIQLH 456
S + L P P QG Q+ ++ S +++S + + P+ + +
Sbjct: 384 SSSSHLLP-----------PILTQGQEIGQLSVA-SPMNISLLYRETTEDAMNPSRLLMS 431
Query: 457 SGISNGNMTNHDESKESLSCLLTMGKSIKSLEKSVDVKK-HQFLLFGQPILTEQQISNSC 515
+ N++ + + +E+++ K F LFG + T I +
Sbjct: 432 YPVQPMPKRNYN------------NQMVTQIEENITTKAGTNFRLFGVSLATPPVIKDPI 479
Query: 516 SREVLSHNNSGKNSLAVNEDK---EKCFFDSPGKASSAEFSWQLGLDTGHC-KVFLESED 571
+ G + + E K + SP K S +FS T C KV ++
Sbjct: 480 EQ-------IGSDISKLTEGKKFGQSQTLRSPTKIQSKQFS-----STRTCTKVQMQGVT 527
Query: 572 VGRSLDLSCLGSYEELYMRLANLFGLE-RSEMLNH--VLYRDATGAVKQTGEEPFSDFMK 628
+GR++DLS L Y++L + L LF L+ + + N +++ + G++P+ +F
Sbjct: 528 IGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCN 587
Query: 629 TAKRLTI 635
KR+ I
Sbjct: 588 MVKRIYI 594
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 185/684 (27%), Positives = 288/684 (42%), Gaps = 147/684 (21%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRG-----SLPPF 54
+G KS + QLW CAG + +P++ V+YFPQG+ E A T +L LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSK 77
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQ 112
+ C V A+ + +DE++A++ L+P N +P SF K LT
Sbjct: 78 LQCRVIAIHLKVENNSDEIYAEITLMP-----DTTQVVIPTQSENRFRPLVNSFTKVLTA 132
Query: 113 SDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLT 152
SD + GGFSVP+ A +H W+FRH YRGTP+RH LT
Sbjct: 133 SDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLT 192
Query: 153 TGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXX 212
TGW+ F+ KKLV GD +VF+R E GEL VGIRRA+
Sbjct: 193 TGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNI------------------ 234
Query: 213 XXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQ-PFEVV 271
P S +R+G + A NQ F VV
Sbjct: 235 -----PSSIVSI------DCMRHGVIASAKH------------------AFDNQCIFIVV 265
Query: 272 YYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVR 331
Y PR+S +F + A+ ++ G RF M FE +D S +F GTI V P
Sbjct: 266 YKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDFSP-H 321
Query: 332 WPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSPPRKKLRFPQHPDFP 391
W S WR L+V WDE +VSPW +E + +PA++ P S K R + +F
Sbjct: 322 WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--VPALN-VPRSSLLKNKRLREVNEF- 377
Query: 392 LDVRFPTPTFSGNQLGPNVPLICLSDNAPASIQGARHAQIGISLSDIHLS----NKLQLG 447
S + L P P QG Q+ ++ S +++S + +
Sbjct: 378 --------GSSSSHLLP-----------PILTQGQEIGQLSVA-SPMNISLRYRDTTEAA 417
Query: 448 LFPTNIQLHSGISNGNMTNHDESKESLSCLLTMGKSIKSLEKSVDVKK-HQFLLFGQPIL 506
+ P+ + + + N++ + + +E+++ K F LFG +
Sbjct: 418 MNPSRLLMSYPVQPMPKLNYN------------NQMVTQIEENITTKAGTNFRLFGVTLD 465
Query: 507 TEQQISNSCSREVLSHNNSGKNSLAVNEDK---EKCFFDSPGKASSAEFSWQLGLDTGHC 563
T I + + G + + E K + SP + S +FS + C
Sbjct: 466 TPPMIKDPIKQ-------IGSDISKLTERKKFGQSQTLRSPIEIQSKQFS-----SSRTC 513
Query: 564 -KVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLE-RSEMLNH--VLYRDATGAVKQTG 619
KV ++ +GR++DLS L Y++L + L LF ++ + + N + + D+ G G
Sbjct: 514 TKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVG 573
Query: 620 EEPFSDFMKTAKRLTILTDSGSKS 643
++P+ +F K K++ I + K+
Sbjct: 574 DDPWPEFCKMVKKILIYSKEEVKN 597
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 184/678 (27%), Positives = 278/678 (41%), Gaps = 151/678 (22%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNV-----DLR--GSLPPF 54
+G KS + QLW CAG + +P++ +V+YFPQGH E T+ +L+ LP
Sbjct: 18 DGSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSK 77
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQ 112
+ C V A+ + +DE +A++ L+P N +P SF K LT
Sbjct: 78 LQCRVIAIHLKVENNSDETYAEITLMP-----DTTQVVIPTQNENQFRPLVNSFTKVLTA 132
Query: 113 SDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLT 152
SD + GGF VP+ A +HG W+F H YRGTP+RHLLT
Sbjct: 133 SDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLT 192
Query: 153 TGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXX 212
TGW+ F KKLVAGD +VF+R E GEL VGIRRA+
Sbjct: 193 TGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNI------------------ 234
Query: 213 XXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQ-PFEVV 271
P S +R+G V+ + A NQ F VV
Sbjct: 235 -----PSSIVSI------DCMRHG------------------VVASAKHAFDNQCMFTVV 265
Query: 272 YYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVR 331
Y PR+S +F + A+ ++ G RF M E +D S F GTI V P
Sbjct: 266 YKPRSS--KFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCF-GTIIGVSDFSP-H 321
Query: 332 WPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHF-TPFSPPRKKLRFPQHPDF 390
W S WR L+V WDE K+VSPW +E + MPAI+ F K+LR
Sbjct: 322 WKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINVPRSFLLKNKRLR------- 372
Query: 391 PLDVRFPTPTFSGNQLGPNVPLICLSDNAPASIQGARHAQIGISLSDIHLSNKLQLGLFP 450
N++G + + P QG + Q+ ++ P
Sbjct: 373 -----------EVNEIGSSSSHLL----PPILTQGQENEQLSVA--------------SP 403
Query: 451 TNIQLHSGISNGNMTNHDE-----SKESLSCLLTMGKSIKSLEKSVDVKK-HQFLLFGQP 504
NI L + + N + + + L + + +E+++ K F LFG
Sbjct: 404 MNISLRYRDATEDAMNPSKLLMSYPVQPMPKLNYNNQMVTEMEENITTKTGTNFRLFGVT 463
Query: 505 ILTEQQISNSCSR---EVLSHNNSGKNSLAVNEDKEKCFFDSPGKASSAEFSWQLGLDTG 561
+ T I + E+ K L+ SP + + +FS +
Sbjct: 464 LDTPPVIKDPIEEIGSEISKLTEGKKFGLSQT-------LRSPTEIQNKQFS-----SSR 511
Query: 562 HC-KVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLE---RSEMLNHVLYRDATGAVKQ 617
C KV ++ +GR++DLS L Y++L + L LF ++ ++ + + D+
Sbjct: 512 TCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKML 571
Query: 618 TGEEPFSDFMKTAKRLTI 635
G++P+ +F K++ I
Sbjct: 572 VGDDPWPEFCNMVKKIFI 589
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 176/400 (44%), Gaps = 95/400 (23%)
Query: 4 GEKSLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTN---VDLRGS-----LPPFI 55
G + L +LW CAG +V +PQ RV+YFPQGH E + VDL LPP I
Sbjct: 5 GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKI 64
Query: 56 LCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQS 113
LCNV V A+ +TDEV+A++ L+P+ + ++P SF+K LT S
Sbjct: 65 LCNVMNVSLQAEKDTDEVYAQITLIPV-GTEVDEPMSPDPSPPELQRPKVHSFSKVLTAS 123
Query: 114 DANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTT 153
D + GGFSV R AE +HG WKF+HI+RG PRRHLLTT
Sbjct: 124 DTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTT 183
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXX 213
GWSTFV K+LVA G+ +V
Sbjct: 184 GWSTFVTSKRLVA-----------GDTFV------------------------------- 201
Query: 214 XXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPE------AVIEAVTLAASNQP 267
FLR EN LR G S V+ A +
Sbjct: 202 -----------FLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKT 250
Query: 268 FEVVYY-PRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQV 326
+VYY PR S +F I + AM ++ GMRFKM FE EDS + GT+ V+
Sbjct: 251 MFIVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVKD 307
Query: 327 VDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSN 366
P W +S WR L+V+WDEP + +VSPW +E N
Sbjct: 308 CSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVN 346
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 167/387 (43%), Gaps = 81/387 (20%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRG-----SLPPF 54
+G KS + QLW CAG + +P++ V+YFPQG+ E A T +L LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSK 77
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQ 112
+ C V A+ + +DE +A++ L+P N +P SF K LT
Sbjct: 78 LQCRVIAIHLKVENNSDETYAEITLMP-----DTTQVVIPTQSENQFRPLVNSFTKVLTA 132
Query: 113 SDANNGGGFSVPR----------------YCAEAIHGELWKFRHIYRGTPRRHLLTTGWS 156
SD + GGF VP+ A+ +HG W+FRH YRGTP+RH LTTGW+
Sbjct: 133 SDTSAYGGFFVPKKHAIECLPPLPLPAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWN 192
Query: 157 TFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXI 216
F KKLV GD +VF+R E GEL VGIRRA+
Sbjct: 193 EFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNI---------------------- 230
Query: 217 GPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQ-PFEVVYYPR 275
P S +R+G + A NQ F VVY P
Sbjct: 231 -PSSIVSI------DCMRHGVIASAKH------------------ALDNQCIFIVVYKPS 265
Query: 276 ASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNS 335
+ +F + AM ++ G RF M FE +D S +F GTI V P W S
Sbjct: 266 IRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYF-GTIIGVNDFSP-HWKCS 323
Query: 336 PWRLLQVNWDEPDLLQNVKRVSPWLVE 362
WR L+V WDE +VSPW +E
Sbjct: 324 EWRSLEVQWDEFASFSRPNKVSPWEIE 350
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 176/405 (43%), Gaps = 95/405 (23%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRG-----SLPPF 54
+G KS + QLW CAG + +P++ +V+YFPQGH E A T +L P
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSK 77
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQ 112
+ C V A++ + +DE +A++ L+P N +P SF K LT
Sbjct: 78 LQCRVIAIQLKVENNSDETYAEITLMP-----DTTQVVIPTQNQNQFRPLVNSFTKVLTA 132
Query: 113 SDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLT 152
SD + GGFSVP+ A +HG W+FRHIYRGT +RHLLT
Sbjct: 133 SDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLT 192
Query: 153 TGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXX 212
GW+ F KKLV GD +VF+R E GEL VGIRRA
Sbjct: 193 IGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNI------------------ 234
Query: 213 XXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQ-PFEVV 271
P S +++R+G +I + A NQ F VV
Sbjct: 235 -----PSSIVSI------ESMRHG------------------IIASAKHAFDNQCMFIVV 265
Query: 272 YYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVR 331
Y PR+S +F + + ++ G RF M FE +D S F GTI V P
Sbjct: 266 YKPRSS--QFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSF-GTIIGVSDFSP-H 321
Query: 332 WPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFS 376
W S WR L+V WDE +VSPW +E H TP+S
Sbjct: 322 WKCSEWRSLEVQWDEFASFPRPNQVSPWDIE--------HLTPWS 358
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 121/216 (56%), Gaps = 29/216 (13%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------SLPPF 54
EGEK ++ QLWHACAG +V +P V S V YFPQGH+E ++ + +LP
Sbjct: 14 EGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSK 73
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASF-AKTLTQS 113
++C + +V AD ETDEV+A+M L P+ + +P F KTLT S
Sbjct: 74 LICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTAS 133
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE I H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTT 193
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKK 189
GWS FV+ K+L AGDSV+F+R E +L +GIRRA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANR 229
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 267 PFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQV 326
PF + + PRAS EF + + A+ Q GMRF+M FETED + +MGT+ +
Sbjct: 261 PFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTGISD 319
Query: 327 VDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPF---SPPRKKLR 383
+DPVRW S WR LQV WDE RVS W +E V TPF PP + +
Sbjct: 320 LDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV-------ITPFYICPPPFFRPK 372
Query: 384 FPQHPDFPLD 393
+P+ P P D
Sbjct: 373 YPRQPGMPDD 382
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 120/216 (55%), Gaps = 29/216 (13%)
Query: 3 EGEK-SLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------SLPPF 54
EGE+ +++ +LWHACAG ++ +P S V YFPQGH+E ++ + +LP
Sbjct: 15 EGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSK 74
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASF-AKTLTQS 113
++C + V ADPETDEV+A+M L P+ + +P F KTLT S
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE I H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKK 189
GWS FV+ K+L AGDSV+F+R +L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 267 PFEVVYYPRASTP-EFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQ 325
PF + Y PR + P EF + + AM Q GMRF+M FETE+ + +MGT+ +
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 326 VVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPF---SPPRKKL 382
+DPVRW NS WR LQ+ WDE RVS W +E V TPF PP +
Sbjct: 321 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRP 373
Query: 383 RFPQHPDFPLD 393
RF P P D
Sbjct: 374 RFSGQPGMPDD 384
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 120/216 (55%), Gaps = 29/216 (13%)
Query: 3 EGEK-SLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------SLPPF 54
EGE+ +++ +LWHACAG ++ +P S V YFPQGH+E ++ + +LP
Sbjct: 15 EGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSK 74
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASF-AKTLTQS 113
++C + V ADPETDEV+A+M L P+ + +P F KTLT S
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE I H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKK 189
GWS FV+ K+L AGDSV+F+R +L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 267 PFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQV 326
PF + Y PRA+ EF + + AM Q GMRF+M FETE+ + +MGT+ +
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 320
Query: 327 VDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPF---SPPRKKLR 383
+DPVRW NS WR LQ+ WDE RVS W +E V TPF PP + R
Sbjct: 321 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRPR 373
Query: 384 FPQHPDFPLD 393
F P P D
Sbjct: 374 FSGQPGMPDD 383
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 120/216 (55%), Gaps = 29/216 (13%)
Query: 3 EGEK-SLDPQLWHACAGGMVQMPQVNSRVFYFPQGHAEHAHTNVDLRG-------SLPPF 54
EGE+ +++ +LWHACAG ++ +P S V YFPQGH+E ++ + +LP
Sbjct: 15 EGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSK 74
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPASF-AKTLTQS 113
++C + V ADPETDEV+A+M L P+ + +P F KTLT S
Sbjct: 75 LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 114 DANNGGGFSVPRYCAEAI--------------------HGELWKFRHIYRGTPRRHLLTT 153
D + GGFSVPR AE I H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 154 GWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKK 189
GWS FV+ K+L AGDSV+F+R +L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 267 PFEVVYYPRASTP-EFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQ 325
PF + Y PR + P EF + + AM Q GMRF+M FETE+ + +MGT+ +
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 326 VVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPF---SPPRKKL 382
+DPVRW NS WR LQ+ WDE RVS W +E V TPF PP +
Sbjct: 321 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRP 373
Query: 383 RFPQHPDFPLD 393
RF P P D
Sbjct: 374 RFSGQPGMPDD 384
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 177/685 (25%), Positives = 269/685 (39%), Gaps = 153/685 (22%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRG-----SLPPF 54
+G KS + QLW CAG + +P++ +++YFPQG+ E A T +L LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSK 77
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQ 112
+ C V A++ + +DE +A++ L+P N +P SF K LT
Sbjct: 78 LQCRVIAIQLKVENNSDETYAEITLMP-----DTTQVVIPTQNENQFRPLVNSFTKVLTA 132
Query: 113 SDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLT 152
SD + GGF VP+ A +HG W+F H YRGTP+RHLLT
Sbjct: 133 SDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLT 190
Query: 153 TGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXX 212
TGW+ F KKLVA G++ V +R
Sbjct: 191 TGWNAFTTSKKLVA-----------GDVIVFVR--------------------------- 212
Query: 213 XXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQ-PFEVV 271
G G +R N S R VI + A NQ F VV
Sbjct: 213 ----GETGELRVGIRRAGHQQGNIPSSIISIESMR-----HGVIASAKHAFDNQCMFIVV 263
Query: 272 YYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVR 331
Y PR+S +F + A+ ++ G RF M FE +D S +F GTI V P
Sbjct: 264 YKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDFSP-H 319
Query: 332 WPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHF-TPFSPPRKKLRFPQHPDF 390
W S WR L+V WDE +VSPW +E + MPA++ P K+LR
Sbjct: 320 WKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNVPRPSLLKNKRLR------- 370
Query: 391 PLDVRFPTPTFSGNQLGPNVPLICLSDNAPASIQGARHAQIGISLSDIHLSNKLQLGLFP 450
N++G + + P QG Q+ ++ P
Sbjct: 371 -----------EVNEIGSSSSHLL----PPILTQGQEIGQLSVA--------------SP 401
Query: 451 TNIQLHSGISNGNMTNHDE-----SKESLSCLLTMGKSIKSLEKSVDVKK-HQFLLFGQP 504
NI L + ++ N + + L + + +E+++ K F LFG
Sbjct: 402 MNISLTYRDTTEDVMNPSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKTGTNFRLFGVS 461
Query: 505 ILTEQQISNSCSREVLSHNNSGKNSLAVNEDK---EKCFFDSPGKASSAEFSWQLGLDTG 561
++T I + G + E K + SP + S +FS T
Sbjct: 462 LVTPSVIKDPIEE-------IGSEISKLTEGKKFGQSQTLRSPTEIQSKQFS-----STR 509
Query: 562 HC-KVFLESEDVGRSLDLSCLGSYEELYMRLANLFGLE---RSEMLNHVLYRDATGAVKQ 617
C KV ++ + R++DLS L Y++L + L LF L+ ++ + + D+
Sbjct: 510 TCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDKML 569
Query: 618 TGEEPFSDFMKTAKRLTILTDSGSK 642
G++P+ +F K++ I G K
Sbjct: 570 VGDDPWPEFCNMVKKILIFKRGGQK 594
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 163/383 (42%), Gaps = 86/383 (22%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRGSLPPFIL-----CNVAAVK 63
+LW+ CAG + +P+ +V+YFPQGH E T +L P F L C V A+
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAID 84
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPAS--FAKTLTQSDANNGGGF 121
D TDEV+A++ L+P ++ +P F+K LT SD + GG
Sbjct: 85 RKVDKNTDEVYAQISLMP-----DTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 122 SVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTG--WSTFV 159
+P+ A+ ++G+ W F+H++RGTP+RH+ T+G WS F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 160 NQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXXXXXXXXXXXXXIGPY 219
K+L+ GD V LR ENGEL GIRRAK
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHI------------------------- 234
Query: 220 GAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTP 279
+ + C+ G VI +V A + V Y + S+
Sbjct: 235 ---------PSSVISANCMQHG-------------VIASVVNAFKTKCMFNVVY-KPSSS 271
Query: 280 EFCIKASAVKAAMRVQWCSGMRFKMPFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRL 339
+F I AM + G RF+M FE +D S + GTI V + P W +S WR
Sbjct: 272 QFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE-KRYDGTIIGVNDMSP-HWKDSEWRS 329
Query: 340 LQVNWDEPDLLQNVKRVSPWLVE 362
L+V WDE +VSPW +E
Sbjct: 330 LKVQWDELSPFLRPNQVSPWDIE 352
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 134/294 (45%), Gaps = 83/294 (28%)
Query: 105 SFAKTLTQSDANNGGGFSVPR--------------------YCAEAIHGELWKFRHIYRG 144
SF K LT SD + GGFSV R A +HG W+F+HI+RG
Sbjct: 36 SFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRG 95
Query: 145 TPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGELYVGIRRAKKXXXXXXXXXXXXXXX 204
PRRHLLTTGWSTFV K+LVAGD+ VFLR E G+L VG+RR K
Sbjct: 96 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTM---------- 145
Query: 205 XXXXXXXXXXXIGPYGAFSFFLREENKTLRNGCVGGGGDLSGRARVRPEAVIEAVTLAAS 264
P S ++++R G + AVT +
Sbjct: 146 -------------PASVIS------SQSMRLGVLATAS--------------HAVT---T 169
Query: 265 NQPFEVVYYPRASTPEFCIKASAVKAAMRVQWCSGMRFKMPFETEDS-SRISWFMGTIAS 323
F V Y PR S +F I + AM+ + GMR++M FE E+S RI F GTI
Sbjct: 170 TTIFVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTIIG 225
Query: 324 VQVVDPVRWPNSPWRLLQVNWDEPDLLQNVKRVSPWLVELVSNMPAIHFTPFSP 377
+ +WP S WR LQ+ WDEP +Q +VSPW +E PFSP
Sbjct: 226 SGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSP 267
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 36/209 (17%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRGSLPPFIL-----CNVAAVK 63
+LW+ CAG + +P+ +V+YFPQGH E T +L P F L C V A+
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAID 84
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPAS--FAKTLTQSDANNGGGF 121
D TDEV+A++ L+P ++ +P F+K LT SD + GG
Sbjct: 85 RKVDKNTDEVYAQISLMP-----DTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 122 SVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTG--WSTFV 159
+P+ A+ ++G+ W F+H++RGTP+RH+ T+G WS F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 160 NQKKLVAGDSVVFLRAENGELYVGIRRAK 188
K+L+ GD V LR ENGEL GIRRAK
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAK 228
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 36/209 (17%)
Query: 11 QLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLRGSLPPFIL-----CNVAAVK 63
+LW+ CAG + +P+ +V+YFPQGH E T +L P F L C V A+
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAID 84
Query: 64 FMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPAS--FAKTLTQSDANNGGGF 121
D TDEV+A++ L+P ++ +P F+K LT SD + GG
Sbjct: 85 RKVDKNTDEVYAQISLMP-----DTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGL 139
Query: 122 SVPR--------------------YCAEAIHGELWKFRHIYRGTPRRHLLTTG--WSTFV 159
+P+ A+ ++G+ W F+H++RGTP+RH+ T+G WS F
Sbjct: 140 IIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 199
Query: 160 NQKKLVAGDSVVFLRAENGELYVGIRRAK 188
K+L+ GD V LR ENGEL GIRRAK
Sbjct: 200 TTKRLIVGDIFVLLRGENGELRFGIRRAK 228
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 101/215 (46%), Gaps = 42/215 (19%)
Query: 3 EGEKS-LDPQLWHACAGGMVQMPQVNSRVFYFPQGHAE--HAHTNVDLR-----GSLPPF 54
+G KS + QLW CAG + +P++ +V+YFPQGH E A T +L LP
Sbjct: 18 DGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSK 77
Query: 55 ILCNVAAVKFMADPETDEVFAKMRLVPLRNSXXXXXXXXXXXXXNSEKPA--SFAKTLTQ 112
+ C V A+ + +DE + ++ L+P N +P SF K LT
Sbjct: 78 LQCRVIAIHLKVENNSDETYVEITLMP-----DTTQVVIPTENENQFRPIVNSFTKVLTA 132
Query: 113 SDANNGGGFSVPRYCAEAI----------------------HGELWKFRHIYRGTPRRHL 150
SD + G FSVP C AI HG W+F+H YR PR
Sbjct: 133 SDTSAQGEFSVP--CKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD- 188
Query: 151 LTTGWSTFVNQKKLVAGDSVVFLRAENGELYVGIR 185
TTGW+ F KKLV GD +VF R E GEL VGIR
Sbjct: 189 -TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>ATMG00940.1 | Symbols: ORF164 | DNA binding | chrM:251403-251897
REVERSE LENGTH=164
Length = 164
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 235 NGCVGGGGDLSGRARVRPEAVIEAVTLAASNQPFEVVYYPRASTPEFCIKASAVKAAMRV 294
+G G +G+ ++ EAV EA+ AA PFEVVYYP A +F +KA V+A+M +
Sbjct: 47 DGSAKKGFRRTGKGKLTAEAVSEAINRAAQGLPFEVVYYPTAGWSDFVVKAEDVEASMAI 106
Query: 295 QWCSGMRFKMPFETEDSSRISWFMGTI-ASVQVVDPVRWPNSPW 337
W G R KM ETEDSSRI+WF G + + Q P W SPW
Sbjct: 107 FWTPGTRVKMAMETEDSSRITWFQGIVFYTYQETGP--WRGSPW 148
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 101 EKPASFAKTLTQSDANNGGGFSVP-----RY-----------------CAEAIHGELWKF 138
EK A F K LT SD +P RY C E G+ W+F
Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRF 92
Query: 139 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVF--LRAENGELYVGIRR 186
R+ Y + + ++LT GWS +V +K L AGD V+F R++ G ++G RR
Sbjct: 93 RYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 101 EKPASFAKTLTQSDANNGGGFSVP-----RY-----------------CAEAIHGELWKF 138
EK A F K LT SD +P RY C E G+ W+F
Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRF 92
Query: 139 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVF--LRAENGELYVGIRR 186
R+ Y + + ++LT GWS +V +K L AGD V+F R++ G ++G RR
Sbjct: 93 RYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 22/102 (21%)
Query: 104 ASFAKTLTQSDANNGGGFSVPRYCAEA--------------------IHGELWKFRHIYR 143
A F K +T SD +P++ AE ++G++W+FR+ Y
Sbjct: 186 ALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW 245
Query: 144 GTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRA--ENGELYVG 183
+ + ++LT GWS FV +K L AGD V F R+ ++ +LY+G
Sbjct: 246 NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 106 FAKTLTQSDANNGGGFSVPRYCAEAI-----------------HGELWKFRHIYRGTPRR 148
F K LT SD +P+ AE +G++W+FR+ Y + +
Sbjct: 36 FDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDFQDKNGKMWRFRYSYWNSSQS 95
Query: 149 HLLTTGWSTFVNQKKLVAGDSVVFLRA 175
+++T GWS FV +KKL AGD+V F R
Sbjct: 96 YVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
Query: 106 FAKTLTQSDANNGGGFSVPRYCAEA----------------------IHGELWKFRHIYR 143
F KT+T SD +P++ AE ++G++W+FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 144 GTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRA--ENGELYVG 183
+ + ++LT GWS FV +K+L AGD + F R+ ++ + ++G
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIG 284
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 24/109 (22%)
Query: 101 EKPASFAKTLTQSDANNGGGFSVPRYCAEAI-------------------HGELWKFRHI 141
EK F K +T SD +P+ AE +G++W+FR+
Sbjct: 51 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110
Query: 142 YRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLR-----AENGELYVGIR 185
Y + + +++T GWS FV +KKL AGD V F R +E +LY+ R
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWR 159
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 129 EAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGE--LYV 182
E ++G++W+FR+ Y + + ++LT GWS FV +K L AGD V F R+ E LY+
Sbjct: 232 EDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYI 287
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 129 EAIHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGE--LYV 182
E ++G++W+FR+ Y + + ++LT GWS FV +K L AGD V F R+ E LY+
Sbjct: 232 EDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYI 287
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 24/113 (21%)
Query: 101 EKPASFAKTLTQSDANNGGGFSVPRYCAEAI----------------------HGELWKF 138
E+ F K +T SD +P+ AE G W+F
Sbjct: 18 EREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRF 77
Query: 139 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLR--AENGELYVGIRRAKK 189
R+ Y + + +++T GWS FV KKL AGD V F R +LY+ RR K
Sbjct: 78 RYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPK 130