Miyakogusa Predicted Gene

Lj0g3v0141249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0141249.1 Non Chatacterized Hit- tr|H3AWJ6|H3AWJ6_LATCH
Uncharacterized protein OS=Latimeria chalumnae
GN=EXTL,30.6,8e-19,EXOSTOSIN-LIKE GLYCOSYLTRANSFERASE,NULL; EXOSTOSIN
(HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED,NUL,gene.g10726.t1.1
         (322 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80290.2 | Symbols:  | Nucleotide-diphospho-sugar transferase...   335   3e-92
AT1G80290.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...   334   4e-92
AT5G04500.1 | Symbols:  | glycosyltransferase family protein 47 ...    71   1e-12
AT3G55830.1 | Symbols: EPC1 | Nucleotide-diphospho-sugar transfe...    66   3e-11

>AT1G80290.2 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr1:30188420-30189574 FORWARD
           LENGTH=337
          Length = 337

 Score =  335 bits (859), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 168/303 (55%), Positives = 203/303 (66%), Gaps = 8/303 (2%)

Query: 24  DPCGPKSKRDPLTLRPDKITVLINGFSESRIPLLQSIAATYXXXXXXXXXXXXWGNPSTP 83
           DPC   ++R+   LR D+ITVLING+SE RIPLLQ+I A+Y            WGNPSTP
Sbjct: 38  DPCDATNQREFQKLRSDQITVLINGYSEYRIPLLQTIVASYSSSSIVSSILVLWGNPSTP 97

Query: 84  PHILDQLSLNLSSAGPISILRQTSGSL----NARFLPRPDHIHTLAVLICDDDVEVDTVS 139
             +LDQL  NL+   P S             NARFLPR   + T AVLICDDDVE+D  S
Sbjct: 98  DQLLDQLYQNLTQYSPGSASISLIQQSSSSLNARFLPRS-SVDTRAVLICDDDVEIDQRS 156

Query: 140 FEFAFRVWSANNHRLIGLFARSHDLDLNRKEWLYTVHPDRFSIVLTKFMILNSDYLYKYS 199
            EFAF VW +N  RL+G F RSH  DL  KEW+YTVHPD++SIVLTKFM++  DYL++YS
Sbjct: 157 LEFAFSVWKSNPDRLVGTFVRSHGFDLQGKEWIYTVHPDKYSIVLTKFMMMKQDYLFEYS 216

Query: 200 CEGGARMAELRRVVDSARNCEDILMNFVVADWNGVGPVLVGAEKVRDYGDARNDGDDEXX 259
           C+GG  M E+R +VD  RNCEDILMNFV AD    GP++VGAE+VRD+GDARN+  +E  
Sbjct: 217 CKGGVEMEEMRMIVDQMRNCEDILMNFVAADRLRAGPIMVGAERVRDWGDARNEEVEERV 276

Query: 260 XXXXXXXXXXXXXXXXXXXXWCITEFHRVLGRMPLRYSYGKVVDSVGEQGLCQKSGKLVF 319
                                CI EFHRV+G+MPL YSYGKVV+SVGEQGLC+K+GKLVF
Sbjct: 277 RDVGLSSRRVEHRKRRGN---CIREFHRVMGKMPLMYSYGKVVNSVGEQGLCRKAGKLVF 333

Query: 320 CDQ 322
           CD+
Sbjct: 334 CDR 336


>AT1G80290.1 | Symbols:  | Nucleotide-diphospho-sugar transferases
           superfamily protein | chr1:30188585-30189574 FORWARD
           LENGTH=329
          Length = 329

 Score =  334 bits (857), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 168/303 (55%), Positives = 203/303 (66%), Gaps = 8/303 (2%)

Query: 24  DPCGPKSKRDPLTLRPDKITVLINGFSESRIPLLQSIAATYXXXXXXXXXXXXWGNPSTP 83
           DPC   ++R+   LR D+ITVLING+SE RIPLLQ+I A+Y            WGNPSTP
Sbjct: 30  DPCDATNQREFQKLRSDQITVLINGYSEYRIPLLQTIVASYSSSSIVSSILVLWGNPSTP 89

Query: 84  PHILDQLSLNLSSAGPISILRQTSGSL----NARFLPRPDHIHTLAVLICDDDVEVDTVS 139
             +LDQL  NL+   P S             NARFLPR   + T AVLICDDDVE+D  S
Sbjct: 90  DQLLDQLYQNLTQYSPGSASISLIQQSSSSLNARFLPRS-SVDTRAVLICDDDVEIDQRS 148

Query: 140 FEFAFRVWSANNHRLIGLFARSHDLDLNRKEWLYTVHPDRFSIVLTKFMILNSDYLYKYS 199
            EFAF VW +N  RL+G F RSH  DL  KEW+YTVHPD++SIVLTKFM++  DYL++YS
Sbjct: 149 LEFAFSVWKSNPDRLVGTFVRSHGFDLQGKEWIYTVHPDKYSIVLTKFMMMKQDYLFEYS 208

Query: 200 CEGGARMAELRRVVDSARNCEDILMNFVVADWNGVGPVLVGAEKVRDYGDARNDGDDEXX 259
           C+GG  M E+R +VD  RNCEDILMNFV AD    GP++VGAE+VRD+GDARN+  +E  
Sbjct: 209 CKGGVEMEEMRMIVDQMRNCEDILMNFVAADRLRAGPIMVGAERVRDWGDARNEEVEERV 268

Query: 260 XXXXXXXXXXXXXXXXXXXXWCITEFHRVLGRMPLRYSYGKVVDSVGEQGLCQKSGKLVF 319
                                CI EFHRV+G+MPL YSYGKVV+SVGEQGLC+K+GKLVF
Sbjct: 269 RDVGLSSRRVEHRKRRGN---CIREFHRVMGKMPLMYSYGKVVNSVGEQGLCRKAGKLVF 325

Query: 320 CDQ 322
           CD+
Sbjct: 326 CDR 328


>AT5G04500.1 | Symbols:  | glycosyltransferase family protein 47 |
           chr5:1283604-1286155 FORWARD LENGTH=765
          Length = 765

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 8/160 (5%)

Query: 79  NPSTPPHILDQLSLNLSSAGPISILRQTSGSLNARFLPRPDHIHTLAVLICDDDVEVDTV 138
           N   PP + +     L SA P+ I  Q   SLN RF   P  I T AVL  DDD+ +   
Sbjct: 553 NKGPPPDLSE-----LDSAVPVRIRVQKQNSLNNRFEIDP-LIKTRAVLELDDDIMMPCD 606

Query: 139 SFEFAFRVWSANNHRLIGLFARSHDLDLNRKEWLYTVHPDRFSIVLTKFMILNSDYLYKY 198
             E  FRVW  +  RL+G + R  D  +      +      ++++LT    ++  + +  
Sbjct: 607 DIEKGFRVWREHPERLVGFYPRFVDQTMTYSAEKFARSHKGYNMILTGAAFMDVRFAFDM 666

Query: 199 SCEGGARMAELRRVVDSARNCEDILMNFVVADWNGVGPVL 238
                A++   R  VD   NCEDIL+NF+ A+ +G G  +
Sbjct: 667 YQSDKAKLG--RVFVDEQFNCEDILLNFLYANASGSGKAV 704


>AT3G55830.1 | Symbols: EPC1 | Nucleotide-diphospho-sugar
           transferases superfamily protein |
           chr3:20715101-20717133 FORWARD LENGTH=334
          Length = 334

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 42/279 (15%)

Query: 43  TVLINGFSESRIPLLQSIAATYXXXXXXXXXXXXWGNPSTPPHILDQLSLNL----SSAG 98
           T+L+N +   R  LL+   + Y            W  P+ P   L +   N+    +  G
Sbjct: 75  TLLMNTWK--RYDLLKKSVSHYASCSRLDSIHIVWSEPNPPSESLKEYLHNVLKKKTRDG 132

Query: 99  PISILR---QTSGSLNARFLPRPDHIHTLAVLICDDDVEVDTVSFEFAFRVWSANNHRLI 155
               LR       SLN RF    D + T AV   DDD+     + +FAF VW +    ++
Sbjct: 133 HEVELRFDINKEDSLNNRFKEIKD-LKTDAVFSIDDDIIFPCHTVDFAFNVWESAPDTMV 191

Query: 156 GLFARSHDLDLNRKE--------WLYTVHPDRFSIVLTKFMILNSDYLYKYSCEGGARMA 207
           G   R H  + +  +        W        +S+VL+K    +  YL  Y+    +  A
Sbjct: 192 GFVPRVHWPEKSNDKANYYTYSGWWSVWWSGTYSMVLSKAAFFHKKYLSLYT---NSMPA 248

Query: 208 ELRRVVDSARNCEDILMNFVVADWNGVGPVLVGAE--KVRDYGDARNDGDDEXXXXXXXX 265
            +R      RNCEDI M+F++A+      + V  +  ++   G +   G  E        
Sbjct: 249 SIREFTTKNRNCEDIAMSFLIANATNAPAIWVKGKIYEIGSTGISSIGGHTEKRTH---- 304

Query: 266 XXXXXXXXXXXXXXWCITEFHRVLGRMPLRYSYGKVVDS 304
                          C+  F    G+MPL Y+  K VDS
Sbjct: 305 ---------------CVNRFVAEFGKMPLVYTSMKAVDS 328