Miyakogusa Predicted Gene

Lj0g3v0140849.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0140849.2 Non Chatacterized Hit- tr|I3SRE7|I3SRE7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0.00000000000002, ,CUFF.8601.2
         (40 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10090.1 | Symbols:  | Early-responsive to dehydration stress...    68   1e-12
AT1G58520.1 | Symbols: RXW8 | lipases;hydrolases, acting on este...    66   4e-12
AT3G01100.1 | Symbols: HYP1, ATHYP1 | hypothetical protein 1 | c...    53   4e-08
AT3G01100.2 | Symbols: HYP1, ATHYP1 | hypothetical protein 1 | c...    52   1e-07
AT1G69450.2 | Symbols:  | Early-responsive to dehydration stress...    47   3e-06
AT1G69450.1 | Symbols:  | Early-responsive to dehydration stress...    47   3e-06

>AT1G10090.1 | Symbols:  | Early-responsive to dehydration stress
          protein (ERD4) | chr1:3290572-3295271 REVERSE
          LENGTH=762
          Length = 762

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/40 (77%), Positives = 35/40 (87%)

Query: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPGNVSVYFGR 40
          MD++ALLTSAGINIA+CVVL S YS+LRKQP N  VYFGR
Sbjct: 1  MDVSALLTSAGINIAICVVLVSLYSILRKQPANYCVYFGR 40


>AT1G58520.1 | Symbols: RXW8 | lipases;hydrolases, acting on ester
          bonds | chr1:21733543-21738165 FORWARD LENGTH=746
          Length = 746

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/40 (72%), Positives = 35/40 (87%)

Query: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPGNVSVYFGR 40
          M+I+ALLTSAGINI++C+VL S YS+LRKQP N  VYFGR
Sbjct: 1  MEISALLTSAGINISICIVLLSLYSILRKQPANYCVYFGR 40


>AT3G01100.1 | Symbols: HYP1, ATHYP1 | hypothetical protein 1 |
          chr3:35013-38176 REVERSE LENGTH=703
          Length = 703

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 31/40 (77%)

Query: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPGNVSVYFGR 40
          M ++ALLTS GIN+ +C + F+ YS+LRKQP NV+VY  R
Sbjct: 1  MLLSALLTSVGINLGLCFLFFTLYSILRKQPSNVTVYGPR 40


>AT3G01100.2 | Symbols: HYP1, ATHYP1 | hypothetical protein 1 |
          chr3:35810-38176 REVERSE LENGTH=596
          Length = 596

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 31/40 (77%)

Query: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPGNVSVYFGR 40
          M ++ALLTS GIN+ +C + F+ YS+LRKQP NV+VY  R
Sbjct: 1  MLLSALLTSVGINLGLCFLFFTLYSILRKQPSNVTVYGPR 40


>AT1G69450.2 | Symbols:  | Early-responsive to dehydration stress
          protein (ERD4) | chr1:26107120-26110006 REVERSE
          LENGTH=711
          Length = 711

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 28/40 (70%)

Query: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPGNVSVYFGR 40
          M ++ALL S GIN  +CV+LF  YSVLRKQP N  V+  R
Sbjct: 1  MLLSALLMSVGINSCLCVLLFILYSVLRKQPRNYEVFLPR 40


>AT1G69450.1 | Symbols:  | Early-responsive to dehydration stress
          protein (ERD4) | chr1:26107120-26110006 REVERSE
          LENGTH=711
          Length = 711

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 28/40 (70%)

Query: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPGNVSVYFGR 40
          M ++ALL S GIN  +CV+LF  YSVLRKQP N  V+  R
Sbjct: 1  MLLSALLMSVGINSCLCVLLFILYSVLRKQPRNYEVFLPR 40