Miyakogusa Predicted Gene

Lj0g3v0140559.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0140559.4 tr|C1DZ92|C1DZ92_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_98657
,33.7,0.000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL; ANTIGEN
MLAA-22-RELATED,NULL; Apt1,FMP27,  C-terminal,CUFF.8587.4
         (408 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58250.1 | Symbols: SAB | Golgi-body localisation protein dom...   394   e-110
AT1G58250.2 | Symbols: SAB | Golgi-body localisation protein dom...   394   e-110
AT5G49680.2 | Symbols:  | Golgi-body localisation protein domain...   349   2e-96

>AT1G58250.1 | Symbols: SAB | Golgi-body localisation protein domain
            ;RNA pol II promoter Fmp27 protein domain |
            chr1:21587317-21601373 REVERSE LENGTH=2607
          Length = 2607

 Score =  394 bits (1011), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/388 (55%), Positives = 265/388 (68%), Gaps = 14/388 (3%)

Query: 1    MYRMMWGYFFHDEERDSQRRQEVWKVSTTAGARRVKKGXXXXXXXXXXXXXXXXXXXXXX 60
            MYRMMW YFF +EE+DSQ RQEVWK+STTAG++RVKKG                      
Sbjct: 2214 MYRMMWEYFFPEEEQDSQSRQEVWKISTTAGSKRVKKGLVGHESSGHAIKDVEASRMSSS 2273

Query: 61   XVFSTMLFPATSQPSVRVDSAQASKAQNVRSNPGTSSTPELMRTSSFDRTWEETVAESVA 120
             + ++    + S      DS Q S    +RS+ G S+  EL RTSSFDR  EE VAE +A
Sbjct: 2274 ALSASAAVQSQSND----DSVQKSNVICLRSSTGASAQ-ELRRTSSFDR--EENVAEPIA 2326

Query: 121  DELVLQSFSSHKNGPFGFTELQDEAFKNKSKDSKGVKAGHSSLEETKVAKSLEEKKSRPR 180
            +ELVLQ+ S + +      E Q++  K K K+ K VK+G SS EE K  KS EEKKSRPR
Sbjct: 2327 NELVLQAHSCNVSSSI---EQQEDFSKQKVKEIKPVKSGRSSHEEKKAGKSHEEKKSRPR 2383

Query: 181  KIIEFHNIKISQVELLVTYEGQRFVVNDLKLLMDQFHRAEFTGTWRKLFSRVKKHIIWGV 240
            K++EFHNIKISQVELLVTYEG RFVVNDLKLLMD FHR EFTGTWR+LFSRVKKHIIWGV
Sbjct: 2384 KMMEFHNIKISQVELLVTYEGSRFVVNDLKLLMDTFHRVEFTGTWRRLFSRVKKHIIWGV 2443

Query: 241  LKSVAGMQGRKFINKGQSQPSGAGVPEIDINFSDNEGHAGKPDKYPLSWPKRPNDGAGDK 300
            LKSV GMQG+KF +K  +        + D+N SDN+   GKPD+  ++W KR +DGAGD 
Sbjct: 2444 LKSVTGMQGKKFKDKSHNNREST---DNDLNLSDND-QTGKPDQQQVTWFKRQSDGAGDG 2499

Query: 301  FVTSMKGLFNTQRRKAKAFVLKTMKGGADSDMQGDWSENDAEIIPFARQLSVVKTKKLIK 360
            FVTS++GLFNTQRRKAKAFVL+TM+G A++D  GDWS++D E  PFARQL++ K K+LI+
Sbjct: 2500 FVTSIRGLFNTQRRKAKAFVLRTMRGEAENDFHGDWSDSDVEFSPFARQLTITKAKRLIR 2559

Query: 361  QHSKKLFXXXXXXXXXXXXEALPSSPRE 388
            +H+KK              E+LPSSP E
Sbjct: 2560 RHTKKFRPRSQRGSTSQQRESLPSSPIE 2587


>AT1G58250.2 | Symbols: SAB | Golgi-body localisation protein domain
            ;RNA pol II promoter Fmp27 protein domain |
            chr1:21587317-21601373 REVERSE LENGTH=2655
          Length = 2655

 Score =  394 bits (1011), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/388 (55%), Positives = 265/388 (68%), Gaps = 14/388 (3%)

Query: 1    MYRMMWGYFFHDEERDSQRRQEVWKVSTTAGARRVKKGXXXXXXXXXXXXXXXXXXXXXX 60
            MYRMMW YFF +EE+DSQ RQEVWK+STTAG++RVKKG                      
Sbjct: 2262 MYRMMWEYFFPEEEQDSQSRQEVWKISTTAGSKRVKKGLVGHESSGHAIKDVEASRMSSS 2321

Query: 61   XVFSTMLFPATSQPSVRVDSAQASKAQNVRSNPGTSSTPELMRTSSFDRTWEETVAESVA 120
             + ++    + S      DS Q S    +RS+ G S+  EL RTSSFDR  EE VAE +A
Sbjct: 2322 ALSASAAVQSQSND----DSVQKSNVICLRSSTGASAQ-ELRRTSSFDR--EENVAEPIA 2374

Query: 121  DELVLQSFSSHKNGPFGFTELQDEAFKNKSKDSKGVKAGHSSLEETKVAKSLEEKKSRPR 180
            +ELVLQ+ S + +      E Q++  K K K+ K VK+G SS EE K  KS EEKKSRPR
Sbjct: 2375 NELVLQAHSCNVSSSI---EQQEDFSKQKVKEIKPVKSGRSSHEEKKAGKSHEEKKSRPR 2431

Query: 181  KIIEFHNIKISQVELLVTYEGQRFVVNDLKLLMDQFHRAEFTGTWRKLFSRVKKHIIWGV 240
            K++EFHNIKISQVELLVTYEG RFVVNDLKLLMD FHR EFTGTWR+LFSRVKKHIIWGV
Sbjct: 2432 KMMEFHNIKISQVELLVTYEGSRFVVNDLKLLMDTFHRVEFTGTWRRLFSRVKKHIIWGV 2491

Query: 241  LKSVAGMQGRKFINKGQSQPSGAGVPEIDINFSDNEGHAGKPDKYPLSWPKRPNDGAGDK 300
            LKSV GMQG+KF +K  +        + D+N SDN+   GKPD+  ++W KR +DGAGD 
Sbjct: 2492 LKSVTGMQGKKFKDKSHNNREST---DNDLNLSDND-QTGKPDQQQVTWFKRQSDGAGDG 2547

Query: 301  FVTSMKGLFNTQRRKAKAFVLKTMKGGADSDMQGDWSENDAEIIPFARQLSVVKTKKLIK 360
            FVTS++GLFNTQRRKAKAFVL+TM+G A++D  GDWS++D E  PFARQL++ K K+LI+
Sbjct: 2548 FVTSIRGLFNTQRRKAKAFVLRTMRGEAENDFHGDWSDSDVEFSPFARQLTITKAKRLIR 2607

Query: 361  QHSKKLFXXXXXXXXXXXXEALPSSPRE 388
            +H+KK              E+LPSSP E
Sbjct: 2608 RHTKKFRPRSQRGSTSQQRESLPSSPIE 2635


>AT5G49680.2 | Symbols:  | Golgi-body localisation protein domain ;RNA
            pol II promoter Fmp27 protein domain |
            chr5:20176385-20188307 FORWARD LENGTH=2587
          Length = 2587

 Score =  349 bits (895), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 196/367 (53%), Positives = 240/367 (65%), Gaps = 48/367 (13%)

Query: 1    MYRMMWGYFFHDEERDSQRRQEVWKVSTTAGARRVKKGXXXXXXXXXXXXXXXXXXXXXX 60
            MY MMW Y F  EE+ SQRR+EVWKVSTT+G+RR +KG                      
Sbjct: 2221 MYTMMWEYIFPGEEQHSQRREEVWKVSTTSGSRR-RKGSFAQEAAALLAAS--------- 2270

Query: 61   XVFSTMLFPATSQPSVRVDSAQASKAQNVRSNPGTSSTPELMRTSSFDRTWEETVAESVA 120
                              D  Q SK Q+++S+    S  EL RTSSFDR+WEETVAESVA
Sbjct: 2271 ------------------DLGQGSKNQSLKSSTIRGSGRELRRTSSFDRSWEETVAESVA 2312

Query: 121  DELVLQSFSSHKNGPFGFTELQDEAFKNKSKDSKGVKAGHSSL-EETKVAKSLEEKKSRP 179
             ELVL S            E Q E+ K K KDSK  KAG  S+ EE K  KSLE+KKSRP
Sbjct: 2313 TELVLSSM-----------EHQGESSKGKLKDSKTSKAGGRSVHEEKKGEKSLEDKKSRP 2361

Query: 180  RKIIEFHNIKISQVELLVTYEGQRFVVNDLKLLMDQFHRAEFTGTWRKLFSRVKKHIIWG 239
            +KI++F  IKISQVELL+TYEG RFVVND+KL MD FHR EF+GTWR+LFSRVKKHIIWG
Sbjct: 2362 QKIMQFQTIKISQVELLITYEGSRFVVNDMKLCMDTFHRVEFSGTWRRLFSRVKKHIIWG 2421

Query: 240  VLKSVAGMQGRKFINKGQSQPSGAGVPEIDINFSDNEGHAGKPDKYPLSWPKRPNDGAGD 299
            VLKSV GMQ +KF +K       A VP+ DI   D +  +G+ D+   +W KRP D AGD
Sbjct: 2422 VLKSVTGMQMKKFKDK-------AHVPKDDIGLRDKD-ESGRTDQESGAWVKRPGDNAGD 2473

Query: 300  KFVTSMKGLFNTQRRKAKAFVLKTMKGGADSDMQGDWSENDAEIIPFARQLSVVKTKKLI 359
             FVTS++G+FNTQRRKAK FVL+TM+G A+ +  G+WS+N+++  PFARQL++ K KKLI
Sbjct: 2474 GFVTSIRGIFNTQRRKAKKFVLRTMRGEAEDNFPGEWSDNESDFSPFARQLTITKAKKLI 2533

Query: 360  KQHSKKL 366
            ++HSKK 
Sbjct: 2534 RRHSKKF 2540