Miyakogusa Predicted Gene
- Lj0g3v0140499.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0140499.1 gene.g10657.t1.1
(337 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 174 9e-44
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 145 5e-35
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 141 6e-34
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 139 3e-33
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 4e-33
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 6e-33
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 2e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 2e-32
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 3e-32
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 4e-32
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 6e-32
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 7e-32
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 8e-32
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 4e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 4e-30
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 6e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 6e-30
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 7e-30
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 2e-29
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 2e-29
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 2e-29
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 1e-28
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 9e-28
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 6e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 6e-27
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 118 6e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 7e-27
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 7e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 115 3e-26
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 112 4e-25
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 6e-25
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 6e-25
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 7e-25
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 109 3e-24
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 6e-24
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 8e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 7e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 102 4e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 100 2e-21
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 99 5e-21
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 98 7e-21
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 97 1e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 1e-20
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 7e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 7e-20
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 9e-20
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 7e-19
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 90 3e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 89 4e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 89 5e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 88 9e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 88 1e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 78 9e-15
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 72 4e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 4e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 1e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 4e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 67 2e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 62 5e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 62 7e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 58 9e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 58 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 57 1e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 2e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 52 4e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 5e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 52 5e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 2e-06
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 49 4e-06
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 4e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 49 5e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 49 5e-06
AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 | chr2:1... 49 7e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 175/374 (46%), Gaps = 80/374 (21%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACE 77
+R G E L+S+N V+ LC EG+++E VL +M D VTYNTLIK C+
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 78 AEKNH--------------NPS-IPYV-------------RIVELYHQMCVRELSPNETT 109
H PS I Y R +E QM VR L PNE T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 110 YRSMIRLF-----------------------------------CDRNRVEEAVGILRLMA 134
Y +++ F C ++E+A+ +L M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
EKGLSP SYS ++S FC++ ++ +AL +K EM++KGI PD Y LIQ C QRR
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 254
EA DL++EML G+ P TY L+ AYC++G+ K L +E+++KG L P
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL--------PD 554
Query: 255 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG-----FRRIRELRKA 309
+VTY+ LI+GL R EA +L + P +V+Y +I F+ + L K
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 310 FELKLEMDQKETCW 323
F +K M + + +
Sbjct: 615 FCMKGMMTEADQVF 628
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 156/309 (50%), Gaps = 21/309 (6%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPY 88
+ ++N +++ C G + A + +KM P+ VTYNTLI C+ K +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG---- 259
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+L M ++ L PN +Y +I C R++E +L M +G S +Y+ +
Sbjct: 260 ---FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I +CK +AL M EML G+ P V Y LI +C + A + +M +RG+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P RTY TLV+ + KG ++ + + E+ G FSPS+VTYNALI+G C
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG--------FSPSVVTYNALINGHCVT 428
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 328
+ ++A+ +L M E L PD VSYS V+SGF R ++ +A +K EM +K D
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI--KPDTI 486
Query: 329 TNESLVKDF 337
T SL++ F
Sbjct: 487 TYSSLIQGF 495
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 135/257 (52%), Gaps = 14/257 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P ++YN ++ A +++N I + V + +M ++SPN TY +IR FC
Sbjct: 167 PGVLSYNAVLDATIRSKRN----ISFAENV--FKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
++ A+ + M KG P+ +Y+ +I +CK +++ ++ M KG+ P++ +Y +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+I LC + R+ E + EM RG S TY+TL++ YC +G F + + E+++ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+PS++TY +LIH +C + A+E L M L P+E +Y+ ++ GF +
Sbjct: 341 --------LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 303 IRELRKAFELKLEMDQK 319
+ +A+ + EM+
Sbjct: 393 KGYMNEAYRVLREMNDN 409
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 61/282 (21%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
+R G +V++NA++ C GK+ +A AVLE M + PD V+Y+T++ C
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
S + + +M + + P+ TY S+I+ FC++ R +EA + M G
Sbjct: 463 -------SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
L P +Y+ +I+ +C ++ KAL++ EM++KG+ PDV Y +LI L Q R EA+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 198 DL--------------------------------------------------FQEMLLRG 207
L F+ ML +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
P G Y+ ++ +C G+ K + L E+++ GFL + VT
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 156/295 (52%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +V+ N+++ C ++ EA A++++M + PD VT+ TL+ + HN
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ----HNK 185
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V +VE +M V+ P+ TY ++I C R + A+ +L M + +
Sbjct: 186 ASEAVALVE---RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +I CK + + AL + EM +KGI PDV Y LI LC+ R +A L +ML
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R ++P T+++L++A+ +G+ + L DE+IQ+ S P++VTYN+LI+G
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR--------SIDPNIVTYNSLING 354
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R DEA +I M PD V+Y+ +I+GF + +++ EL +M ++
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 23/312 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAE----AVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G + ++++++ LC G+ +A +LE+ +P+ VT+N+LI A + K
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK---- 325
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ +L+ +M R + PN TY S+I FC +R++EA I LM K P +
Sbjct: 326 ---LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FCK K++ +E+ +M +G+ + Y LI A+ +F++M+
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY+TL++ C G+ K + E +QK + P + TYN + G
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQK-------SKMEPDIYTYNIMSEG 494
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+C + ++ ++ + + PD ++Y+ +ISGF + +A+ L ++M + P
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED---GP 551
Query: 325 L-DQDTNESLVK 335
L D T +L++
Sbjct: 552 LPDSGTYNTLIR 563
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 156/341 (45%), Gaps = 29/341 (8%)
Query: 6 RVSSTVATLKTFWNVPIRG--FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT-- 61
++ S +A +K F V G G L ++N ++ LC +L A A+L KM
Sbjct: 70 KLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL 129
Query: 62 --DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
P VT N+L+ C + V L QM P+ T+ +++
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNR-------ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
N+ EAV ++ M KG P +Y +I+ CK E AL + +M I DV
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
Y +I LC R + +A +LF EM +G+ P TY +L+ C G +S L +++
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
++ +P++VT+N+LI + EA ++ M + +DP+ V+Y+++I+G
Sbjct: 303 ER--------KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 300 F---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
F R+ E ++ F L + D C P D T +L+ F
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKD----CLP-DVVTYNTLINGF 390
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 23/287 (8%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ AV+ LC G+ A +L KM + D V Y+T+I + C+ +
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ +M + + P+ TY S+I C+ R +A +L M E+ ++P+ +
Sbjct: 260 -------LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I F K ++ +A ++ EM+ + I P++ Y LI C RL EA+ +F M+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P TY+TL+ +C + L ++ ++G + + VTY LIHG
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV--------GNTVTYTTLIHG 424
Query: 265 LCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
FFQ D A + + M + P+ ++Y+ ++ G + +L KA
Sbjct: 425 --FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 138/286 (48%), Gaps = 19/286 (6%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSI 86
E +V ++ V+ LC + +A + +M + PD TY++LI C + + S
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS- 295
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
L M R+++PN T+ S+I F ++ EA + M ++ + P+ +Y+
Sbjct: 296 ------RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
+I+ FC + + +A ++ M+ K PDV Y LI C +++++ +LF++M R
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
G+ TY TL+ + + + +++ G P+++TYN L+ GLC
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV--------HPNIMTYNTLLDGLC 461
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+ ++A+ + + + ++PD +Y+ + G + ++ ++L
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSI 86
+ +V++N+++ C +L EA+ + M DC VTYNTLI C+A+K
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK------ 395
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
V +EL+ M R L N TY ++I F + + A + + M G+ P+ +Y+
Sbjct: 396 -VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ CKN ++ KA+ + + + PD++ Y ++ + +C ++ + DLF + L+
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
G+ P Y+T++ +C KG + + L ++ + G L P TYN LI
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL--------PDSGTYNTLIRAHL 566
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
+ E+++ M D +Y V
Sbjct: 567 RDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 138/304 (45%), Gaps = 40/304 (13%)
Query: 49 KLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELS 104
KL EA + +M P V ++ L+ A + +K + ++ +M + +S
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK-------FDLVISFGEKMEILGVS 97
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
N TY MI C R+++ A+ IL M + G P + + +++ FC + +A+ +
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
+M++ G PD + L+ L + EA L + M+++G P TY ++ C
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFS----------------------------PSLV 256
+GE +L ++ ++KG + V +S P +
Sbjct: 218 RGEPDLALNLLNK-MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
TY++LI LC + R +A +L M E ++P+ V+++++I F + +L +A +L EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 317 DQKE 320
Q+
Sbjct: 337 IQRS 340
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 20/302 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +V++++++ LC +GK + +L +M PD VT++ LI + K
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK---- 330
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ELY++M R ++P+ TY S+I FC N + EA + LM KG P +
Sbjct: 331 ---LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +I+ +CK K + + + E+ KG+ P+ Y L+ C +L A++LFQEM+
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
RG+ P TY L++ C GE +K + E +QK + + + YN +IHG
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIF-EKMQK-------SRMTLGIGIYNIIIHG 499
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+C + D+A + + + + PD V+Y+ +I G + L +A L +M +++ C P
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGCTP 558
Query: 325 LD 326
D
Sbjct: 559 DD 560
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 149/287 (51%), Gaps = 19/287 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
LV+ + ++ LC +G++ EA ++++M + PD VTY ++ C K+ N ++
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC---KSGNSALA-- 229
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++L+ +M R + + Y +I C ++A+ + M KG+ +YS +I
Sbjct: 230 --LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C + + +M EM+ + I PDV + LI + + +LLEA++L+ EM+ RG++
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY++L++ +C + + + D ++ KG P +VTY+ LI+ C +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKG--------CEPDIVTYSILINSYCKAK 399
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
R D+ + + R + L P+ ++Y+ ++ GF + +L A EL EM
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 149/347 (42%), Gaps = 40/347 (11%)
Query: 6 RVSSTVATLKTFWNVP--IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM--- 60
R+ S VA K + V +G G E + + ++ C + KL A +VL +
Sbjct: 75 RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 134
Query: 61 -TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
+PD +T++TL+ C + R+VE+ + P+ T ++I C
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR-------PDLVTVSTLINGLCL 187
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
+ RV EA+ ++ M E G P +Y +++R CK+ AL++ +M ++ I V
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
Y ++I LC +A LF EM ++G+ TY +L+ C G++ + E+I
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 240 QKGFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPD 272
+ +P VT +P +TYN+LI G C
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
EA ++ M +PD V+YS +I+ + + + + L E+ K
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 46/233 (19%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G +++N+++ C E L EA + + M +PD VTY+ LI + C+A++ +
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ ++ + L PN TY +++ FC ++ A + + M +G+ P +
Sbjct: 405 -------MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 145 YSRIISRFCKNKEMGKALEM---------------------------KVE--------ML 169
Y ++ C N E+ KALE+ KV+ +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
DKG+ PDV Y ++I LC + L EA LF++M G +P TY+ L+ A+
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE- 77
R ++ G +++N +V C GKL A+ + ++M P VTY L+ C+
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
E N + +E++ +M ++ Y +I C+ ++V++A + +++KG
Sbjct: 469 GELN--------KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+ P +Y+ +I CK + +A + +M + G PD Y +LI+ L+ +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 198 DLFQEMLLRGMSPGGRTYDTLVE 220
+L +EM + G S T +++
Sbjct: 581 ELIEEMKVCGFSADSSTIKMVID 603
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 13/267 (4%)
Query: 56 VLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRI---VELYHQMCVRELSPNETTYRS 112
+LEK T + Y+++ +A ++ I +++ ++L+ M P +
Sbjct: 18 ILEKGTS--LLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNR 75
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
+ + + +G + M G+ + + +I+ +C+ K++ A + G
Sbjct: 76 LCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
PD + L+ C + R+ EA L M+ P T TL+ CLKG S+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 233 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 292
L D +++ G F P VTY +++ LC AL++ R M E + V
Sbjct: 196 VLIDRMVEYG--------FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 293 YSAVISGFRRIRELRKAFELKLEMDQK 319
YS VI + A L EM+ K
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMK 274
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 152/293 (51%), Gaps = 20/293 (6%)
Query: 36 SFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN +V LC G ++ A + +L++ DPD TYN++I C+ +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE-------VKEA 349
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
VE+ QM R+ SPN TY ++I C N+VEEA + R++ KG+ P +++ +I
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C + A+E+ EM KG PD Y +LI LC + +L EA ++ ++M L G +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY+TL++ +C + + + DE+ V S + VTYN LI GLC +R
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEM--------EVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
++A +++ M PD+ +Y+++++ F R +++KA ++ M C P
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEP 573
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 19/294 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++N ++ LC E ++ EA + +T PD T+N+LI+ C +NH ++
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC-LTRNHRVAM---- 420
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
EL+ +M + P+E TY +I C + +++EA+ +L+ M G + +Y+ +I
Sbjct: 421 --ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
FCK + +A E+ EM G+ + Y LI LC RR+ +A L +M++ G P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY++L+ +C G+ K + + G P +VTY LI GLC R
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG--------CEPDIVTYGTLISGLCKAGR 590
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+ A ++LR + ++ +Y+ VI G R R+ +A L EM ++ P
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 19/257 (7%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNH 82
+ G E ++N ++ LC +GKL EA +L++M C +TYNTLI C+A K
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
E++ +M V +S N TY ++I C RVE+A ++ M +G P
Sbjct: 488 EAE-------EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +++ FC+ ++ KA ++ M G PD+ YG LI LC R+ A L +
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
+ ++G++ Y+ +++ K + ++ +L E++++ P P V+Y +
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP-------PDAVSYRIVF 653
Query: 263 HGLCFFQRP-DEALEIL 278
GLC P EA++ L
Sbjct: 654 RGLCNGGGPIREAVDFL 670
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 41/322 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEK---- 80
G + + +FN ++K LC +LR A +LE M PD T+ T+++ E
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 81 --------NHNPSIPYVRIVELYHQMC-----------VRELS------PNETTYRSMIR 115
S V + + H C ++E+S P++ T+ +++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
C V+ A+ I+ +M ++G P +Y+ +IS CK E+ +A+E+ +M+ + P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
+ Y LI LC + ++ EA +L + + +G+ P T+++L++ CL L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
+E+ KG P TYN LI LC + DEAL +L+ M ++Y+
Sbjct: 424 EEMRSKG--------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 296 VISGFRRIRELRKAFELKLEMD 317
+I GF + + R+A E+ EM+
Sbjct: 476 LIDGFCKANKTREAEEIFDEME 497
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 21/293 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N ++ L L+ E KM+ PD T+N LIKA C A + P + ++
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR----PAILML 212
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E M L P+E T+ ++++ + + ++ A+ I M E G S S + I+ F
Sbjct: 213 E---DMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 153 CKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
CK + AL EM ++ G FPD + + L+ LC + A ++ ML G P
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY++++ C GE + + D++I + SP+ VTYN LI LC +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITR--------DCSPNTVTYNTLISTLCKENQV 381
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+EA E+ R + + PD +++++I G R R A EL EM K C P
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEP 433
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 20/283 (7%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEA 78
R T+ G + +FN++++ LC R A + E+M +PD TYN LI + C
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
K + ++ ++ +EL C R + TY ++I FC N+ EA I M G+
Sbjct: 449 GK-LDEALNMLKQMEL--SGCARSV----ITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
S ++ +Y+ +I CK++ + A ++ +M+ +G PD + Y L+ C + +A D
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
+ Q M G P TY TL+ C G L + KG + +P Y
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI------NLTPH--AY 613
Query: 259 NALIHGLCFFQRPDEALEILRGMPEML-LDPDEVSYSAVISGF 300
N +I GL ++ EA+ + R M E PD VSY V G
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 65/221 (29%)
Query: 168 MLDK-GIFPDVHAY-----------------------------------GLLIQLLCHQR 191
M+D+ G+ PD H Y +LI+ LC
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 192 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-- 249
+L A + ++M G+ P +T+ T+++ Y +G+ +++++++ G V+
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263
Query: 250 --------------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
F P T+N L++GLC A+EI+ M +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
DPD +Y++VISG ++ E+++A E+ +M ++ C P
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD-CSP 363
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++N+++ C G +++A +++ MT +PD VTY TLI C+A + S I
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP-HADSYSRIIS 150
QM L+P+ Y +I+ + + EA+ + R M E+ +P A SY +
Sbjct: 602 -----QMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 151 RFCKNK-EMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 187
C + +A++ VE+L+KG P+ + +L + L
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 150/295 (50%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +V+ ++++ C ++ +A A++++M + PD T+ TLI HN
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL----HNK 203
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V +V+ QM R P+ TY +++ C R ++ A+ +L+ M + +
Sbjct: 204 ASEAVALVD---QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ II CK K M AL + EM +KGI PDV Y LI LC+ R +A L +M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R ++P T+ L++A+ +G+ + L DE+I++ S P + TY++LI+G
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--------SIDPDIFTYSSLING 372
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R DEA + M P+ V+YS +I GF + + + + EL EM Q+
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 24/302 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ VV LC G + A ++L+KM + D V YNT+I C+ + +
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ +M + + P+ TY S+I C+ R +A +L M E+ ++P+ +
Sbjct: 278 -------LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+S +I F K ++ +A ++ EM+ + I PD+ Y LI C RL EA+ +F+ M+
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P TY TL++ +C + L E+ Q+G + + VTY LIHG
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV--------GNTVTYTTLIHG 442
Query: 265 LCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
FFQ D A + + M + + P+ ++Y+ ++ G + +L KA + E Q+ T
Sbjct: 443 --FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQRSTM 499
Query: 323 WP 324
P
Sbjct: 500 EP 501
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 19/287 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V+F+A++ EGKL EAE + ++M DPD TY++LI C ++
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK---- 383
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++ M ++ PN TY ++I+ FC RVEE + + R M+++GL + +Y+ +I
Sbjct: 384 ---HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
F + ++ A + +M+ G+ P++ Y +L+ LC +L +A +F+ + M
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY+ ++E C G+ + L F + SP+++ YN +I G C
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWEL--------FCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+EA +L+ M E P+ +Y+ +I R + + EL EM
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 19/278 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G + ++++++ LC G+ +A +L E+ +P+ VT++ LI A + K
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK---- 343
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V +LY +M R + P+ TY S+I FC +R++EA + LM K P+ +
Sbjct: 344 ---LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +I FCK K + + +E+ EM +G+ + Y LI R A+ +F++M+
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY+ L++ C G+ +K + E +Q+ ++ P + TYN +I G
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVF-EYLQR-------STMEPDIYTYNIMIEG 512
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+C + ++ E+ + + P+ ++Y+ +ISGF R
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 8/228 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V+L+ M P+ + ++ N+ E + + M G+S +YS I+
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ ++ AL + +M+ G PD+ L+ CH +R+ +A L +M+ G P
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T+ TL+ L + S+ L D+++Q+G P LVTY +++GLC
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRG--------CQPDLVTYGTVVNGLCKRGDI 239
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D AL +L+ M + ++ D V Y+ +I G + + + A L EMD K
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P V +N L+ A + K + ++ L QM +S + TY I FC R++
Sbjct: 81 PSIVEFNKLLSAVAKMNK-------FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ +L M + G P + S +++ +C +K + A+ + +M++ G PD +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
LI L + EA L +M+ RG P TY T+V C +G+ L + ++KG
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK-MEKG 252
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+V YN +I GLC ++ D+AL + M + PD +YS++IS
Sbjct: 253 -------KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 46/249 (18%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYV 89
+ ++++++ C +L EA+ + E M DC VTY+TLIK C+A++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG----- 417
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+EL+ +M R L N TY ++I F + A + + M G+ P+ +Y+ ++
Sbjct: 418 --MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 150 SRFCKNKEMGKAL-----------------------------------EMKVEMLDKGIF 174
CKN ++ KA+ E+ + KG+
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
P+V AY +I C + EA L ++M G P TY+TL+ A G+ L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 235 QDEVIQKGF 243
E+ GF
Sbjct: 596 IKEMRSCGF 604
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 12/172 (6%)
Query: 26 TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKN 81
+ G ++++N ++ LC GKL +A V E + +PD TYN +I+ C+A K
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ EL+ + ++ +SPN Y +MI FC + EEA +L+ M E G P+
Sbjct: 520 EDG-------WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
+ +Y+ +I ++ + + E+ EM G D GL+ +L H RL
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRL 623
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 52 EAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNE 107
A+ V ++M P+ +TYN L+ C+ N + +V Y Q E P+
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCK-----NGKLAKAMVVFEYLQRSTME--PDI 503
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
TY MI C +VE+ + ++ KG+SP+ +Y+ +IS FC+ +A + +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 227
M + G P+ Y LI+ + +L +EM G + T LV G
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGR 622
Query: 228 FSKVF 232
K F
Sbjct: 623 LDKSF 627
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 135 EKGLSPHADSYSRII-SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
E+ + + Y I+ +R ++ A+++ +M+ FP + + L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 194 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 253
L ++M G+S TY + +C + + S + ++++ G + P
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG--------YEP 151
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 313
+VT ++L++G C +R +A+ ++ M EM PD +++ +I G + +A L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 314 LEMDQKETCWP 324
+M Q+ C P
Sbjct: 212 DQMVQR-GCQP 221
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 158/292 (54%), Gaps = 19/292 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +FN ++K L EGK+ EA ++++M + PD VTYN+++ C ++ +
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC---RSGDT 209
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
S+ ++L +M R + + TY ++I C ++ A+ + + M KG+ +
Sbjct: 210 SLA----LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++ CK + + +M+ + I P+V + +L+ + + +L EA +L++EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
RG+SP TY+TL++ YC++ S+ ++ D +++ SP +VT+ +LI G
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--------NKCSPDIVTFTSLIKG 377
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
C +R D+ +++ R + + L + V+YS ++ GF + +++ A EL EM
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 158/330 (47%), Gaps = 39/330 (11%)
Query: 7 VSSTVATLKTFWNVPIRGFTAAGTEK----------------GLVSFNAVVKRLCGEGKL 50
+ S+V T +N +RG AG +++FN ++ EGKL
Sbjct: 259 IKSSVVT----YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 51 REAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPN 106
+EA + ++M P+ +TYNTL+ C + + + M + SP+
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-------NMLDLMVRNKCSPD 367
Query: 107 ETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 166
T+ S+I+ +C RV++ + + R ++++GL +A +YS ++ FC++ ++ A E+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
EM+ G+ PDV YG+L+ LC +L +A ++F+++ M G Y T++E C G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 286
+ ++L F P+++TY +I GLC EA +LR M E
Sbjct: 488 KVEDAWNL--------FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 287 DPDEVSYSAVISGFRRIRELRKAFELKLEM 316
P++ +Y+ +I R +L + +L EM
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 147/294 (50%), Gaps = 19/294 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +V++N++V+ LC GK + +L+ M P+ +T+N L+ + K
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ELY +M R +SPN TY +++ +C +NR+ EA +L LM SP +
Sbjct: 318 N-------ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I +C K + +++ + +G+ + Y +L+Q C ++ A +LFQEM+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY L++ C G+ K + ++ +QK + +V Y +I G
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFED-LQK-------SKMDLGIVMYTTIIEG 482
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+C + ++A + +P + P+ ++Y+ +ISG + L +A L +M++
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN- 83
G ++++N ++ C + +L EA +L+ M PD VT+ +LIK C ++ +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 84 --------------PSIPYVRIV-------------ELYHQMCVRELSPNETTYRSMIRL 116
++ Y +V EL+ +M + P+ TY ++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
CD ++E+A+ I + + + Y+ II CK ++ A + + KG+ P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
V Y ++I LC + L EA L ++M G +P TY+TL+ A+ G+ + L +
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 237 EVIQKGF 243
E+ GF
Sbjct: 568 EMKSCGF 574
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 21/310 (6%)
Query: 11 VATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCV 66
+ T+ +F++ R F++ G V F ++ + K +A A+ ++M P V
Sbjct: 32 LCTISSFFSSCERDFSS--ISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLV 89
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEA 126
++ A K N + + + +EL ++ N T MI FC + A
Sbjct: 90 DFSRFFSAIART-KQFNLVLDFCKQLEL------NGIAHNIYTLNIMINCFCRCCKTCFA 142
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
+L + + G P +++ +I ++ +A+ + M++ G PDV Y ++
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 187 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 246
+C A DL ++M R + TY T++++ C G L E+ KG
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG---- 258
Query: 247 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
S+VTYN+L+ GLC + ++ +L+ M + P+ ++++ ++ F + +L
Sbjct: 259 ----IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 307 RKAFELKLEM 316
++A EL EM
Sbjct: 315 QEANELYKEM 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 92 VELYHQMCVRE---LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+ + C R+ +S +R +R + ++A+ + + M P +SR
Sbjct: 35 ISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRF 94
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
S + K+ L+ ++ GI +++ ++I C + A + +++ G
Sbjct: 95 FSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY 154
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P T++TL++ L+G+ S+ L D +++ G P +VTYN++++G+C
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC--------QPDVVTYNSIVNGICRS 206
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
AL++LR M E + D +YS +I R + A L EM+ K
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 14 LKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYN 69
+K F N+ RG A V+++ +V+ C GK++ AE + ++M PD +TY
Sbjct: 388 MKVFRNISKRGLVANA-----VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 70 TLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGI 129
L+ C+ K + +E++ + ++ Y ++I C +VE+A +
Sbjct: 443 ILLDGLCDNGKLE-------KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 130 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 189
+ KG+ P+ +Y+ +IS CK + +A + +M + G P+ Y LI+
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 190 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
L + L +EM G S + +++
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 151/295 (51%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +V+ N+++ C ++ +A +++ +M + PD T+NTLI HN
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR----HNR 201
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V +V+ +M V+ P+ TY ++ C R ++ A+ +L+ M + + P
Sbjct: 202 ASEAVALVD---RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ II C K + AL + EM +KGI P+V Y LI+ LC+ R +A L +M+
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R ++P T+ L++A+ +G+ + L DE+I++ S P + TY++LI+G
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--------SIDPDIFTYSSLING 370
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R DEA + M P+ V+Y+ +I GF + + + + EL EM Q+
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 140/276 (50%), Gaps = 19/276 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ VV LC G + A ++L+KM +P V YNT+I A C KN N
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY-KNVND 274
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ L+ +M + + PN TY S+IR C+ R +A +L M E+ ++P+ +
Sbjct: 275 AL------NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+S +I F K ++ +A ++ EM+ + I PD+ Y LI C RL EA+ +F+ M+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P TY+TL++ +C + L E+ Q+G + + VTY LIHG
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV--------GNTVTYTTLIHG 440
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+ D A + + M + PD ++YS ++ G
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 19/287 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V+F+A++ EGKL EAE + ++M DPD TY++LI C ++
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK---- 381
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++ M ++ PN TY ++I+ FC RV+E + + R M+++GL + +Y+ +I
Sbjct: 382 ---HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
F + +E A + +M+ G+ PD+ Y +L+ LC+ ++ A +F+ + M
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY+ ++E C G+ + L F + P++VTY ++ G C
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDL--------FCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+EA + R M E PD +Y+ +I R + + EL EM
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 154/312 (49%), Gaps = 23/312 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G +V++N++++ LC G+ +A +L E+ +P+ VT++ LI A + K
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK---- 341
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V +LY +M R + P+ TY S+I FC +R++EA + LM K P+ +
Sbjct: 342 ---LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I FCK K + + +E+ EM +G+ + Y LI R A+ +F++M+
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY L++ C G+ + E +Q+ + P + TYN +I G
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVF-EYLQR-------SKMEPDIYTYNIMIEG 510
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+C + ++ ++ + + P+ V+Y+ ++SGF R +A L EM ++ P
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE---GP 567
Query: 325 L-DQDTNESLVK 335
L D T +L++
Sbjct: 568 LPDSGTYNTLIR 579
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 152/355 (42%), Gaps = 52/355 (14%)
Query: 16 TFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTL 71
+FW +R F+ + +S N + + KL +A + M P V ++ L
Sbjct: 36 SFW---VRDFSGVRYDYRKISINRL-----NDLKLDDAVNLFGDMVKSRPFPSIVEFSKL 87
Query: 72 IKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILR 131
+ A + K + ++ L QM +S N TY +I FC R+++ A+ +L
Sbjct: 88 LSAIAKMNK-------FDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 132 LMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR 191
M + G P + + +++ FC + A+ + +M++ G PD + LI L
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 192 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-- 249
R EA L M+++G P TY +V C +G+ L ++ Q P V
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 250 -------------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
P++VTYN+LI LC + R +A +L M E
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 285 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD--TNESLVKDF 337
++P+ V++SA+I F + +L +A +L EM ++ +D D T SL+ F
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS----IDPDIFTYSSLINGF 371
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 20 VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAA 75
+ + + G +++++ ++ LC GK+ A V E + +PD TYN +I+
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 76 CEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
C+A K + +L+ + ++ + PN TY +M+ FC + EEA + R M E
Sbjct: 512 CKAGKVEDGW-------DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
+G P + +Y+ +I ++ + + E+ EM D GL+ +L H RL
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGRL 621
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 150/295 (50%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G E +V+ ++++ C ++ EA A++++M P+ VT+NTLI HN
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL----HNK 201
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + +++ +M + P+ TY ++ C R + A +L M + L P
Sbjct: 202 ASEAMALID---RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ II CK K M AL + EM KGI P+V Y LI LC+ R +A L +M+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R ++P T+ L++A+ +G+ + L DE++++ S PS+VTY++LI+G
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR--------SIDPSIVTYSSLING 370
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R DEA ++ M PD V+Y+ +I GF + + + + E+ EM Q+
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 19/297 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G +V++++++ LC G+ +A +L E+ +PD T++ LI A + K
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK---- 341
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V +LY +M R + P+ TY S+I FC +R++EA + M K P +
Sbjct: 342 ---LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I FCK K + + +E+ EM +G+ + Y +LIQ L A+++F+EM+
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY+TL++ C G+ K + E +Q+ + P++ TYN +I G
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQR-------SKMEPTIYTYNIMIEG 510
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
+C + ++ ++ + + PD V+Y+ +ISGF R +A L EM + T
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 139/288 (48%), Gaps = 19/288 (6%)
Query: 26 TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKN 81
A G + LV++ VV LC G A +L KM +P + YNT+I C+ +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ + L+ +M + + PN TY S+I C+ R +A +L M E+ ++P
Sbjct: 273 DDA-------LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
++S +I F K ++ +A ++ EM+ + I P + Y LI C RL EA+ +F+
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 261
M+ + P TY+TL++ +C + + E+ Q+G + + VTYN L
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV--------GNTVTYNIL 437
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
I GL D A EI + M + P+ ++Y+ ++ G + +L KA
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 26/296 (8%)
Query: 8 SSTVA-TLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD---- 62
++TV+ + FW G T+ + L S N + E KL +A A+ +M
Sbjct: 25 AATVSPSFSFFWRRAFSGKTSYDYREKL-SRNGL-----SELKLDDAVALFGEMVKSRPF 78
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P + ++ L+ A + K + ++ L QM + N TY +I FC R++
Sbjct: 79 PSIIEFSKLLSAIAKMNK-------FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ +L M + G P+ + S +++ +C +K + +A+ + +M G P+ +
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
LI L + EA L M+ +G P TY +V C +G+ F+L +++ Q
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG- 250
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
P ++ YN +I GLC ++ D+AL + + M + P+ V+YS++IS
Sbjct: 251 -------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V++++++ C +L EA+ + E M PD VTYNTLIK C+ Y
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK----------YK 410
Query: 90 RI---VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
R+ +E++ +M R L N TY +I+ + A I + M G+ P+ +Y+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ CKN ++ KA+ + + + P ++ Y ++I+ +C ++ + DLF + L+
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
G+ P Y+T++ +C KG + L E+ + G LP
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G ++++N ++ LC GKL +A V E + +P TYN +I+ C+A K +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+L+ + ++ + P+ Y +MI FC + EEA + + M E G P++
Sbjct: 521 -------WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
Y+ +I ++ + + E+ EM G D GL+ +L H RL
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRL 621
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 12/214 (5%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA 78
R + G V++N +++ L G A+ + ++M P+ +TYNTL+ C+
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK- 478
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
N + +V Y Q ++ P TY MI C +VE+ + ++ KG+
Sbjct: 479 ----NGKLEKAMVVFEYLQR--SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
P +Y+ +IS FC+ +A + EM + G P+ Y LI+ + +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
L +EM G + T LV G K F
Sbjct: 593 LIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 155/300 (51%), Gaps = 23/300 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G ++ +++ C GK R+A +LE + PD +TYN +I C+A + +N
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + +M V SP+ TY +++R CD ++++A+ +L M ++ P +
Sbjct: 192 -------LSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I C++ +G A+++ EM D+G PDV Y +L+ +C + RL EA +M
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G P T++ ++ + C G + L ++++KG FSPS+VT+N LI+
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG--------FSPSVVTFNILINF 353
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
LC A++IL MP+ P+ +SY+ ++ GF + +++ +A E LE C+P
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY-LERMVSRGCYP 412
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 32/320 (10%)
Query: 18 WNVPIRGFTAAG-------------TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-- 62
+NV I G+ AG +V++N +++ LC GKL++A VL++M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 63 --PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDR 120
PD +TY LI+A C + + + ++L +M R +P+ TY ++ C
Sbjct: 235 CYPDVITYTILIEATC-----RDSGVGHA--MKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
R++EA+ L M G P+ +++ I+ C A ++ +ML KG P V +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
+LI LC + L A D+ ++M G P +Y+ L+ +C + + + + ++
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+G P +VTYN ++ LC + ++A+EIL + P ++Y+ VI G
Sbjct: 408 RGCY--------PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 301 RRIRELRKAFELKLEMDQKE 320
+ + KA +L EM K+
Sbjct: 460 AKAGKTGKAIKLLDEMRAKD 479
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 152/322 (47%), Gaps = 38/322 (11%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G +V++N +V +C EG+L EA L M P+ +T+N ++++ C +
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR---- 324
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ +L M + SP+ T+ +I C + + A+ IL M + G P++ S
Sbjct: 325 ---WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++ FCK K+M +A+E M+ +G +PD+ Y ++ LC ++ +A ++ ++
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS------------ 252
+G SP TY+T+++ G+ K L DE+ K P +T S
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 253 ---------------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
P+ VT+N+++ GLC ++ D A++ L M P+E SY+ +I
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 298 SGFRRIRELRKAFELKLEMDQK 319
G ++A EL E+ K
Sbjct: 562 EGLAYEGMAKEALELLNELCNK 583
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYV 89
+V++N ++ LC +GK+ +A +L +++ C +TYNT+I +A K
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG------- 466
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ ++L +M ++L P+ TY S++ +V+EA+ G+ P+A +++ I+
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
CK+++ +A++ V M+++G P+ +Y +LI+ L ++ EA +L E+ +G+
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +S+N ++ C E K+ A LE+M PD VTYNT++ A C+ K +
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
VE+ +Q+ + SP TY ++I + +A+ +L M K L P +
Sbjct: 434 -------VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS ++ + ++ +A++ E GI P+ + ++ LC R+ A D M+
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
RG P +Y L+E +G + L +E+ KG +
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 111 RSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 170
R M+R +EE L M G P + +I FC+ + KA ++ +
Sbjct: 110 RQMVRT----GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
G PDV Y ++I C + A + M +SP TY+T++ + C G+ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 231 VFHLQDEVIQKGFLPYYVT---------------------------SFSPSLVTYNALIH 263
+ D ++Q+ P +T +P +VTYN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
G+C R DEA++ L MP P+ ++++ ++
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
M+ G PD+ LI+ C + +A + + + G P TY+ ++ YC G
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG 186
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 286
E + + D + S SP +VTYN ++ LC + +A+E+L M +
Sbjct: 187 EINNALSVLDRM-----------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 287 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
PD ++Y+ +I R + A +L EM + C P
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTP 272
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 151/295 (51%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +V+ N+++ C ++ +A A++++M + PD VT+ TLI HN
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL----HNK 198
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V +++ +M R P+ TY +++ C R + A+ +L M + +
Sbjct: 199 ASEAVALID---RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +I CK + AL + EM +KG+ P+V Y LI LC+ R +A L +M+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R ++P T+ L++A+ KG+ K L +E+I++ S P++ TY++LI+G
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR--------SIDPNIFTYSSLING 367
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R EA ++L M P+ V+Y+ +I+GF + + + K EL EM Q+
Sbjct: 368 FCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 147/302 (48%), Gaps = 24/302 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ AVV LC G A +L KM + + V Y+T+I + C+ +
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ +M + + PN TY S+I C+ R +A +L M E+ ++P+ +
Sbjct: 273 -------LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+S +I F K ++ KA ++ EM+ + I P++ Y LI C RL EA+ + + M+
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P TY+TL+ +C K L E+ Q+G + + VTY LIHG
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV--------GNTVTYTTLIHG 437
Query: 265 LCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
FFQ D A + + M + + P+ ++Y+ ++ G + +L KA + E Q+ T
Sbjct: 438 --FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV-FEYLQRSTM 494
Query: 323 WP 324
P
Sbjct: 495 EP 496
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 125/242 (51%), Gaps = 19/242 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G ++++++++ LC G+ +A +L E+ +P+ VT++ LI A + K
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK---- 338
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V+ +LY +M R + PN TY S+I FC +R+ EA +L LM K P+ +
Sbjct: 339 ---LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FCK K + K +E+ EM +G+ + Y LI R A+ +F++M+
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY+ L++ C G+ +K + E +Q+ ++ P + TYN +I G
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQR-------STMEPDIYTYNIMIEG 507
Query: 265 LC 266
+C
Sbjct: 508 MC 509
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
LV+F+A++ +GKL +AE + E+M DP+ TY++LI C ++
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK---- 378
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+++EL M ++ PN TY ++I FC RV++ + + R M+++GL + +Y+ +I
Sbjct: 379 QMLEL---MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
F + ++ A + +M+ G+ P++ Y +L+ LC +L +A +F+ + M
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 210 PGGRTYDTLVEAYCLKGEF 228
P TY+ ++E C G++
Sbjct: 496 PDIYTYNIMIEGMCKAGKW 514
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ L+ M P+ + ++ N+ + + M G+S + +Y+ +I+
Sbjct: 63 IGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINC 122
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ + AL + +M+ G PD+ L+ CH R+ +A L +M+ G P
Sbjct: 123 FCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD 182
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T+ TL+ L + S+ L D ++Q+G P LVTY A+++GLC
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRG--------CQPDLVTYGAVVNGLCKRGDT 234
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D AL +L M ++ + V YS VI + R A L EM+ K
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 19/302 (6%)
Query: 20 VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAA 75
+ R F G + S+N V+ +C G+++EA +L M PD ++Y+T++
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 76 CEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
C + ++ +L M + L PN Y S+I L C ++ EA M
Sbjct: 292 CRFGELD-------KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
+G+ P Y+ +I FCK ++ A + EM + I PDV Y +I C ++E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A LF EM +G+ P T+ L+ YC G F + + +IQ G SP++
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--------CSPNV 456
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
VTY LI GLC D A E+L M ++ L P+ +Y+++++G + + +A +L E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 316 MD 317
+
Sbjct: 517 FE 518
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 22/290 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G E V+F ++ C G +++A V M P+ VTY TLI C+ +
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ EL H+M L PN TY S++ C +EEAV ++ GL+ +
Sbjct: 476 N-------ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++ +CK+ EM KA E+ EML KG+ P + + +L+ C L + L ML
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G++P T+++LV+ YC++ + ++ +G P TY L+ G
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV--------GPDGKTYENLVKG 640
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF---RRIRELRKAFE 311
C + EA + + M +YS +I GF ++ E R+ F+
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 40/334 (11%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V + ++ C G +R A +M PD +TY +I C+ V
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD-------MVE 404
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+L+H+M + L P+ T+ +I +C +++A + M + G SP+ +Y+ +I
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
CK ++ A E+ EM G+ P++ Y ++ LC + EA L E G++
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT--------------------- 249
TY TL++AYC GE K + E++ KG P VT
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 250 ------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
+P+ T+N+L+ C A I + M + PD +Y ++ G +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 304 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
R +++A+ L EM K + + T L+K F
Sbjct: 645 RNMKEAWFLFQEMKGKG--FSVSVSTYSVLIKGF 676
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 24/289 (8%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLIKAACEAEKNHNPSIPYV 89
F+ + L G LREA V EKM + C Y T + C K I +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFR 235
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E+ + N +Y +I C R++EA +L LM KG +P SYS ++
Sbjct: 236 EFPEV-------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ +C+ E+ K ++ M KG+ P+ + YG +I LLC +L EA + F EM+ +G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y TL++ +C +G+ K F + +P ++TY A+I G C
Sbjct: 349 PDTVVYTTLIDGFCKRGDI--------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
EA ++ M L+PD V+++ +I+G+ + ++ AF + M Q
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAAC---- 76
F AAG V++ ++ C G++ +A+ +L++M P VT+N L+ C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 77 --EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
+ EK L + M + ++PN TT+ S+++ +C RN ++ A I + M
Sbjct: 577 LEDGEK-------------LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
+G+ P +Y ++ CK + M +A + EM KG V Y +LI+ +++ L
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 195 EARDLFQEMLLRGMSPGGRTYD 216
EAR++F +M G++ +D
Sbjct: 684 EAREVFDQMRREGLAADKEIFD 705
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + + ++N++V LC G + EA ++ + + D VTY TL+ A C++ +
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
E+ +M + L P T+ ++ FC +E+ +L M KG++P+A +
Sbjct: 546 Q-------EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ ++ ++C + A + +M +G+ PD Y L++ C R + EA LFQEM
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+G S TY L++ + + +F + + D++ ++G
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 9/221 (4%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN-KEMG 159
++ + + ++ D + EA + M GL DS + ++R K+ +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 160 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
A+ + E + G+ +V +Y ++I +C R+ EA L M L+G +P +Y T+V
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 220 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 279
YC GE KV+ L + + +KG P+ Y ++I LC + EA E
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGL--------KPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 280 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
M + PD V Y+ +I GF + ++R A + EM ++
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 19/302 (6%)
Query: 20 VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAA 75
+ R F G + S+N V+ +C G+++EA +L M PD ++Y+T++
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 76 CEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
C + ++ +L M + L PN Y S+I L C ++ EA M
Sbjct: 292 CRFGELD-------KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
+G+ P Y+ +I FCK ++ A + EM + I PDV Y +I C ++E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A LF EM +G+ P T+ L+ YC G F + + +IQ G SP++
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--------CSPNV 456
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
VTY LI GLC D A E+L M ++ L P+ +Y+++++G + + +A +L E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 316 MD 317
+
Sbjct: 517 FE 518
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 22/290 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G E V+F ++ C G +++A V M P+ VTY TLI C+ +
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ EL H+M L PN TY S++ C +EEAV ++ GL+ +
Sbjct: 476 N-------ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++ +CK+ EM KA E+ EML KG+ P + + +L+ C L + L ML
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G++P T+++LV+ YC++ + ++ +G P TY L+ G
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV--------GPDGKTYENLVKG 640
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF---RRIRELRKAFE 311
C + EA + + M +YS +I GF ++ E R+ F+
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 40/334 (11%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V + ++ C G +R A +M PD +TY +I C+ V
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD-------MVE 404
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+L+H+M + L P+ T+ +I +C +++A + M + G SP+ +Y+ +I
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
CK ++ A E+ EM G+ P++ Y ++ LC + EA L E G++
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT--------------------- 249
TY TL++AYC GE K + E++ KG P VT
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 250 ------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
+P+ T+N+L+ C A I + M + PD +Y ++ G +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 304 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
R +++A+ L EM K + + T L+K F
Sbjct: 645 RNMKEAWFLFQEMKGKG--FSVSVSTYSVLIKGF 676
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 24/289 (8%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLIKAACEAEKNHNPSIPYV 89
F+ + L G LREA V EKM + C Y T + C K I +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFR 235
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E+ + N +Y +I C R++EA +L LM KG +P SYS ++
Sbjct: 236 EFPEV-------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ +C+ E+ K ++ M KG+ P+ + YG +I LLC +L EA + F EM+ +G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y TL++ +C +G+ K F + +P ++TY A+I G C
Sbjct: 349 PDTVVYTTLIDGFCKRGDI--------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
EA ++ M L+PD V+++ +I+G+ + ++ AF + M Q
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAAC---- 76
F AAG V++ ++ C G++ +A+ +L++M P VT+N L+ C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 77 --EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
+ EK L + M + ++PN TT+ S+++ +C RN ++ A I + M
Sbjct: 577 LEDGEK-------------LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
+G+ P +Y ++ CK + M +A + EM KG V Y +LI+ +++ L
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 195 EARDLFQEMLLRGMSPGGRTYD 216
EAR++F +M G++ +D
Sbjct: 684 EAREVFDQMRREGLAADKEIFD 705
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + + ++N++V LC G + EA ++ + + D VTY TL+ A C++ +
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
E+ +M + L P T+ ++ FC +E+ +L M KG++P+A +
Sbjct: 546 Q-------EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ ++ ++C + A + +M +G+ PD Y L++ C R + EA LFQEM
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+G S TY L++ + + +F + + D++ ++G
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 9/221 (4%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN-KEMG 159
++ + + ++ D + EA + M GL DS + ++R K+ +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228
Query: 160 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
A+ + E + G+ +V +Y ++I +C R+ EA L M L+G +P +Y T+V
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 220 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 279
YC GE KV+ L + + +KG P+ Y ++I LC + EA E
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGL--------KPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 280 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
M + PD V Y+ +I GF + ++R A + EM ++
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +V + ++V LC G+ R+A+++L MT PD +T+N LI A + K
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK---- 262
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ ELY++M ++PN TY S+I FC V+EA + LM KG P +
Sbjct: 263 ---FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FCK K++ A+++ EM KG+ + Y LIQ + A+++F M+
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
RG+ P RTY+ L+ C G+ K + +++ ++ + +P++ TYN L+HG
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE-----MDGVAPNIWTYNVLLHG 434
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
LC+ + ++AL + M + +D ++Y+ +I G + +++ A L
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 131/256 (51%), Gaps = 15/256 (5%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D T N L+ C++ + PY+ +M P+ T+ S+I FC NR+
Sbjct: 106 DLYTCNLLMNCFCQSSQ------PYLA-SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
EEA+ ++ M E G+ P Y+ II CKN + AL + +M + GI PDV Y L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
+ LC+ R +A L + M R + P T++ L++A+ +G+F L +E+I+
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR--- 275
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
S +P++ TY +LI+G C DEA ++ M PD V+Y+++I+GF +
Sbjct: 276 -----MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 304 RELRKAFELKLEMDQK 319
+++ A ++ EM QK
Sbjct: 331 KKVDDAMKIFYEMSQK 346
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 22/299 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +V + ++ LC G + A ++ ++M + PD V Y +L+ C + + +
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
L M R++ P+ T+ ++I F + +A + M ++P+ +
Sbjct: 232 D-------SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FC + +A +M M KG FPDV AY LI C +++ +A +F EM
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G++ TY TL++ + G+ K V Q+ F P++ TYN L+H
Sbjct: 345 QKGLTGNTITYTTLIQGF---GQVGK-----PNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 265 LCFFQRPDEALEILRGMPEMLLD---PDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
LC+ + +AL I M + +D P+ +Y+ ++ G +L KA + +M ++E
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 22/257 (8%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+ ++ +++ C EG + EA + M PD V Y +LI C+ +K +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA----- 336
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++++++M + L+ N TY ++I+ F + A + M +G+ P+ +Y+ ++
Sbjct: 337 --MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 150 SRFCKNKEMGKALEMKVEMLDK---GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
C N ++ KAL + +M + G+ P++ Y +L+ LC+ +L +A +F++M R
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
M G TY +++ C G+ +L + KG P++VTY +I GL
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG--------VKPNVVTYTTMISGLF 506
Query: 267 FFQRPDEALEILRGMPE 283
EA + R M E
Sbjct: 507 REGLKHEAHVLFRKMKE 523
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 114/248 (45%), Gaps = 11/248 (4%)
Query: 72 IKAAC---EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVG 128
++A C E +N S+ + ++L+ M P+ + ++ + + + +
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 129 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 188
+ + G+S + + +++ FC++ + A +M+ G PD+ + LI C
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 189 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 248
R+ EA + +M+ G+ P Y T++++ C G + L D++ G
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG------ 207
Query: 249 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 308
P +V Y +L++GLC R +A +LRGM + + PD ++++A+I F + +
Sbjct: 208 --IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 309 AFELKLEM 316
A EL EM
Sbjct: 266 AEELYNEM 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 13 TLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTY 68
+K F+ + +G T +++ +++ GK A+ V M P+ TY
Sbjct: 336 AMKIFYEMSQKGLTG-----NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 69 NTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL---SPNETTYRSMIRLFCDRNRVEE 125
N L+ C +N + + + ++ M RE+ +PN TY ++ C ++E+
Sbjct: 391 NVLLHCLC-----YNGKVK--KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443
Query: 126 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 185
A+ + M ++ + +Y+ II CK ++ A+ + + KG+ P+V Y +I
Sbjct: 444 ALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Query: 186 LLCHQRRLLEARDLFQEMLLRGMS 209
L + EA LF++M G+S
Sbjct: 504 GLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 148/292 (50%), Gaps = 17/292 (5%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSI 86
+ + +FN V+ LC GK+ +A V+E M P+ V+YNTLI C+ N
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNG---- 275
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
+ + +M ++SPN TT+ +I F + + ++ + + M ++ + P+ SY+
Sbjct: 276 KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
+I+ C ++ +A+ M+ +M+ G+ P++ Y LI C L EA D+F + +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
G P R Y+ L++AYC G+ F L++E+ ++G + P + TYN LI GLC
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV--------PDVGTYNCLIAGLC 447
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+ A ++ + L PD V++ ++ G+ R E RKA L EM +
Sbjct: 448 RNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 123/244 (50%), Gaps = 16/244 (6%)
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
++N + + YV Y +M R++ PN T+ +I C ++ +A ++ M G
Sbjct: 200 KENRSADVEYV-----YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 139 SPHADSYSRIISRFCK---NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
SP+ SY+ +I +CK N +M KA + EM++ + P++ + +LI L
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
+ +F+EML + + P +Y++L+ C G+ S+ ++D+++ G P+L
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG--------VQPNL 366
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
+TYNALI+G C EAL++ + P Y+ +I + ++ ++ F LK E
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 316 MDQK 319
M+++
Sbjct: 427 MERE 430
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N ++ C GK+ + A+ E+M PD TYN LI C N +I +
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC-----RNGNIEAAK-- 456
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+L+ Q+ + L P+ T+ ++ +C + +A +L+ M++ GL P +Y+ ++ +
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 153 CKNKEMGKALEMKVEM-LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
CK + A M+ +M ++ + +V +Y +L+Q + +L +A L EML +G+ P
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
TY+ +++E++ +GF+P
Sbjct: 576 RITYEI----------------VKEEMVDQGFVP 593
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 13/230 (5%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEK 80
+AG + L+++NA++ C L+EA +V + P YN LI A C+ K
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
+ L +M + P+ TY +I C +E A + + KGL P
Sbjct: 417 IDDG-------FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
++ ++ +C+ E KA + EM G+ P Y ++++ C + L A ++
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 201 QEM-LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
+M R + +Y+ L++ Y KG+ L +E+++KG +P +T
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
L+I LL + R + +++EM+ R + P T++ ++ A C G+ +K + +++
Sbjct: 194 LMIALL-KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM--- 249
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFF---QRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
V SP++V+YN LI G C + +A +L+ M E + P+ +++ +I
Sbjct: 250 -----KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 299 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 334
GF + L + ++ EM LDQD +++
Sbjct: 305 GFWKDDNLPGSMKVFKEM--------LDQDVKPNVI 332
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 31/159 (19%)
Query: 30 TEKGL---VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
T KGL V+F+ +++ C +G+ R+A +L++M+ P +TYN ++K C+ E N
Sbjct: 463 TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK-EGNL 521
Query: 83 NPSIPYVRIVELYHQM-CVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ + QM R L N +Y +++ + + ++E+A +L M EKGL P+
Sbjct: 522 KAA------TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+Y + K EM+D+G PD+ +
Sbjct: 576 RITYEIV----------------KEEMVDQGFVPDIEGH 598
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 148/293 (50%), Gaps = 19/293 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHN 83
+G + + + ++ LC EGK+ +AE +L K P+ V YNT+I C + +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC---RKGD 404
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++I + Q + P+ Y +IR FC+ +E A + M KG+SP +
Sbjct: 405 LVGARMKIEAMEKQ----GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ +I + + E K ++ EM D G P+V +YG LI LC +LLEA+ + ++M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
RG+SP R Y+ L++ C KG+ F E+++KG +LVTYN LI
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG--------IELNLVTYNTLID 572
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
GL + EA ++L + L PD +Y+++ISG+ +++ L EM
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 27/318 (8%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE 77
I G + +++N +++R C G++ AE + KM P TYN LI
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG--- 468
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ + + ++ +M PN +Y ++I C +++ EA + R M ++G
Sbjct: 469 ----YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+SP Y+ +I C ++ A EML KGI ++ Y LI L +L EA
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
DL E+ +G+ P TY++L+ Y G + L +E+ + G P+L T
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG--------IKPTLKT 636
Query: 258 YNALIHGLCFFQRPDEALEIL-RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
Y+ LI LC E +E+ R EM L PD + Y+ V+ + ++ KAF L+ +M
Sbjct: 637 YHLLIS-LC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 317 DQKETCWPLDQDTNESLV 334
+K LD+ T SL+
Sbjct: 692 IEKSI--GLDKTTYNSLI 707
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 136/289 (47%), Gaps = 19/289 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N ++ LC ++ +AE + ++M P +TYNTLI C+A NP +
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA---GNPEKSF---- 269
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
++ +M + P+ T+ ++++ VE+A +L+ M + G P A ++S + +
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
N++ AL + +D G+ + + +L+ LC + ++ +A ++ + +G+ P
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
Y+T+++ YC KG+ ++ E ++K P + YN LI C +
Sbjct: 390 VIYNTMIDGYCRKGDLVGA-RMKIEAMEK-------QGMKPDHLAYNCLIRRFCELGEME 441
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
A + + M + P +Y+ +I G+ R E K F++ EM+ T
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 23/295 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
GT +VS+ ++ LC KL EA+ V M D P YN LI C K +
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+M + + N TY ++I ++ EA +L ++ KGL P +
Sbjct: 549 -------FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +IS + + + + + EM GI P + Y LLI L C + + LF EM
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGEMS 660
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
L+ P Y+ ++ Y + G+ K F+LQ ++I+K S TYN+LI G
Sbjct: 661 LK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK--------SIGLDKTTYNSLILG 709
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ E ++ M ++P+ +Y+ ++ G +++ A+ EM +K
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
E P Y + I K ++GK LE+ M I+P V Y +LI LC +R+
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 254
+A LF EML R + P TY+TL++ YC G K F +++ + PS
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM--------KADHIEPS 283
Query: 255 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
L+T+N L+ GL ++A +L+ M ++ PD ++S + G+
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G E LV++N ++ L GKL EAE +L K PD TYN+LI A
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ-- 616
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
R + LY +M + P TY +I L C + +E RL E L P
Sbjct: 617 -----RCIALYEEMKRSGIKPTLKTYHLLISL-CTKEGIELTE---RLFGEMSLKPDLLV 667
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++ + + +M KA ++ +M++K I D Y LI +L E R L EM
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMN 727
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
R M P TY+ +V+ +C ++ + E+ +KGFL
Sbjct: 728 AREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 27/222 (12%)
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHAD-------------------SYSRIISRFCK 154
+R+ +NR+E A G+L + +P A SY + +
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
+K + +A ++ + ++GI+P + LL+ L ++ ++F +L P
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 181
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 274
Y ++A + K L + + PS+ YN LI GLC +R ++A
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHD--------RIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
++ M L P ++Y+ +I G+ + K+F+++ M
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 149/295 (50%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +V+ ++++ C ++ +A A++++M + PD +T+ TLI HN
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL----HNK 205
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V +V+ +M R PN TY ++ C R ++ A +L M + +
Sbjct: 206 ASEAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +I CK + AL + EM +KG+ P+V Y LI LC+ R +A L +M+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R ++P T++ L++A+ +G+ + L DE+I++ S P + TY++LI+G
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR--------SIDPDIFTYSSLING 374
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R DEA + M P+ V+Y+ +I+GF + + + + EL EM Q+
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 19/278 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G ++++++++ LC + +A +L E+ +P+ VT+N LI A + K
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK---- 345
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V +LY +M R + P+ TY S+I FC +R++EA + LM K P+ +
Sbjct: 346 ---LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FCK K + + +E+ EM +G+ + Y LI R A+ +F++M+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY+TL++ C G+ K + E +Q+ + P++ TYN +I G
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQR-------SKMEPTIYTYNIMIEG 514
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+C + ++ ++ + + PD + Y+ +ISGF R
Sbjct: 515 MCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 141/287 (49%), Gaps = 23/287 (8%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ VV LC G + A +L KM + + V Y+T+I + C+ +
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ +M + + PN TY S+I C+ R +A +L M E+ ++P+ +
Sbjct: 280 -------LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I F K ++ +A ++ EM+ + I PD+ Y LI C RL EA+ +F+ M+
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P TY+TL+ +C + L E+ Q+G + + VTY LIHG
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV--------GNTVTYTTLIHG 444
Query: 265 LCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
FFQ D A + + M + P+ ++Y+ ++ G + +L KA
Sbjct: 445 --FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYV 89
+ ++++++ C +L EA+ + E M DC VTYNTLI C+A++
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG----- 419
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
VEL+ +M R L N TY ++I F + A + + M G+ P+ +Y+ ++
Sbjct: 420 --VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
CKN ++ KA+ + + + P ++ Y ++I+ +C ++ + DLF + L+G+
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 210 PGGRTYDTLVEAYCLKG 226
P Y+T++ +C KG
Sbjct: 538 PDVIIYNTMISGFCRKG 554
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 40/304 (13%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P +N L+ A + +K + ++ L +M +S N TY +I FC R++
Sbjct: 83 PSIFEFNKLLSAIAKMKK-------FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV---- 238
LI L + EA L M+ RG P TY +V C +G+ F+L +++
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 239 IQKGFLPYYVTSFS-----------------------PSLVTYNALIHGLCFFQRPDEAL 275
I+ + Y S P+++TY++LI LC ++R +A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 276 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD--TNESL 333
+L M E ++P+ V+++A+I F + +L +A +L EM ++ +D D T SL
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS----IDPDIFTYSSL 371
Query: 334 VKDF 337
+ F
Sbjct: 372 INGF 375
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
R S YR ++R ++++A+G+ M + P +++++S K K+
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
+ + +M GI +++ Y +LI C + ++ A L +M+ G P T +L+
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
YC S L D++++ G + P +T+ LIHGL + EA+ ++
Sbjct: 164 GYCHGKRISDAVALVDQMVEMG--------YRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
M + P+ V+Y V++G + ++ AF L +M+
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 19/282 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V ++ ++ LC +G L A + +M D +TYNTLI C A + + +
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA----- 318
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+L M R++SPN T+ +I F ++ EA +L+ M ++G++P+ +Y+ +I
Sbjct: 319 --KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
FCK + +A++M M+ KG PD+ + +LI C R+ + +LF+EM LRG+
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY+TLV+ +C G+ EV +K F P +V+Y L+ GLC
Sbjct: 437 NTVTYNTLVQGFCQSGKL--------EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
++ALEI + + ++ D Y +I G ++ A++L
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E V FN ++ LC E ++ EA ++++M + P +T NTL+ C K +
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ R+VE Q PNE TY ++ + C + A+ +LR M E+ + A
Sbjct: 213 VVLIDRMVETGFQ-------PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS II CK+ + A + EM KG D+ Y LI C+ R + L ++M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R +SP T+ L++++ +G+ + L E++Q+G +P+ +TYN+LI G
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG--------IAPNTITYNSLIDG 377
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
C R +EA++++ M DPD ++++ +I+G+ + + EL EM
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 24/297 (8%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLI 72
F + I+GF A ++++N ++ C G+ + +L M P+ VT++ LI
Sbjct: 286 FNEMEIKGFKA-----DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+ + K +L +M R ++PN TY S+I FC NR+EEA+ ++ L
Sbjct: 341 DSFVKEGKLREAD-------QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M KG P +++ +I+ +CK + LE+ EM +G+ + Y L+Q C +
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
L A+ LFQEM+ R + P +Y L++ C GE K + F +
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI--------FGKIEKSKME 505
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+ Y +IHG+C + D+A ++ +P + D +Y+ +IS R L KA
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 20/286 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G +++N+++ C E +L EA + ++ K DPD +T+N LI C+A + +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+EL+ +M +R + N TY ++++ FC ++E A + + M + + P S
Sbjct: 423 -------LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y ++ C N E+ KALE+ ++ + D+ Y ++I +C+ ++ +A DLF +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
L+G+ R Y+ ++ C K SK L ++ ++G +P +TYN LI
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG--------HAPDELTYNILIRA 587
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
A E++ M P +VS ++ EL K+F
Sbjct: 588 HLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINMLSSGELDKSF 632
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P+ + +++ C RV EA+ ++ M E G P + + +++ C N ++ A+ +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
M++ G P+ YG ++ ++C + A +L ++M R + Y +++ C
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
G F+L +E+ KGF ++TYN LI G C R D+ ++LR M +
Sbjct: 276 DGSLDNAFNLFNEMEIKGF--------KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 285 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ P+ V++S +I F + +LR+A +L EM Q+
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 10/246 (4%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V+L+ M P + + + E + + + M KG++ + S +I+
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ +++ A +++ G PD + L+ LC + R+ EA +L M+ G P
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T +TLV CL G+ S L D +++ G F P+ VTY +++ +C +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETG--------FQPNEVTYGPVLNVMCKSGQT 244
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 331
A+E+LR M E + D V YS +I G + L AF L EM+ K + D T
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG--FKADIITYN 302
Query: 332 SLVKDF 337
+L+ F
Sbjct: 303 TLIGGF 308
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
+ ++AV + R M + P ++R+ S K K+ L + +M KGI ++
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
++I C R+L A +++ G P ++TL+ CL+ S+ L D +++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
G P+L+T N L++GLC + +A+ ++ M E P+EV+Y V++
Sbjct: 188 G--------HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 302 RIRELRKAFELKLEMDQKE 320
+ + A EL +M+++
Sbjct: 240 KSGQTALAMELLRKMEERN 258
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 20/300 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLE----KMTDPDCVTYNTLIKAACEAEKNHNP 84
G + + ++N +++ +C EG + A ++ K +PD ++YN L++A K
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK---- 313
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ +L +M + PN TY +I C ++EEA+ +L+LM EKGL+P A S
Sbjct: 314 ---WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y +I+ FC+ + A+E M+ G PD+ Y ++ LC + +A ++F ++
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G SP +Y+T+ A G+ + H+ E++ G P +TYN++I
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG--------IDPDEITYNSMISC 482
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
LC DEA E+L M P V+Y+ V+ GF + + A + LE C P
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV-LESMVGNGCRP 541
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 19/283 (6%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE 77
+R G E ++S+N +++ L +GK E E ++ KM DP+ VTY+ LI C
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
K + L M + L+P+ +Y +I FC R++ A+ L M G
Sbjct: 346 DGKIEEA-------MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
P +Y+ +++ CKN + +ALE+ ++ + G P+ +Y + L + A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
+ EM+ G+ P TY++++ C +G + F L + F PS+VT
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL--------LVDMRSCEFHPSVVT 510
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
YN ++ G C R ++A+ +L M P+E +Y+ +I G
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEK----------- 80
++NA++ C ++ +A VL++M PD VTYN +I + C K
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 81 ---NHNPS-IPYVRIVE-------------LYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
N P+ I Y ++E L +M R L P+ TY ++IR C V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
+ A ++R + KG P SY+ ++ + + ++ +M + P+V Y +L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
I LC ++ EA +L + M +G++P +YD L+ A+C +G + +I G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
L P +V YN ++ LC + D+ALEI + E+ P+ SY+ + S
Sbjct: 400 L--------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 304 RELRKAFELKLEM 316
+ +A + LEM
Sbjct: 452 GDKIRALHMILEM 464
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 140/316 (44%), Gaps = 40/316 (12%)
Query: 40 VVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELY 95
+ R C G E+ +LE M +PD + LIK +N ++ + I+E +
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL-RNIPKAVRVMEILEKF 153
Query: 96 HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 155
Q P+ Y ++I FC NR+++A +L M K SP +Y+ +I C
Sbjct: 154 GQ-------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 156 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTY 215
++ AL++ ++L P V Y +LI+ + + EA L EML RG+ P TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 216 DTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-----------------------SFS 252
+T++ C +G + F + + KG P ++ FS
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 253 ----PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 308
P++VTY+ LI LC + +EA+ +L+ M E L PD SY +I+ F R L
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 309 AFELKLEMDQKETCWP 324
A E LE + C P
Sbjct: 387 AIEF-LETMISDGCLP 401
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 15/218 (6%)
Query: 31 EKGLV----SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
EKGL S++ ++ C EG+L A LE M PD V YNT++ C+ K
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ +E++ ++ SPN ++Y +M A+ ++ M G+ P
Sbjct: 421 -------QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +IS C+ + +A E+ V+M P V Y +++ C R+ +A ++ +
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
M+ G P TY L+E G ++ L +++++
Sbjct: 534 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIF-------------------------------- 174
+I R C++ ++L + M+ KG
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 175 --PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
PDV AY LI C R+ +A + M + SP TY+ ++ + C +G+
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 233 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 292
+ ++++ + P+++TY LI DEAL+++ M L PD +
Sbjct: 214 KVLNQLLSD--------NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 293 YSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
Y+ +I G + + +AFE+ ++ K C P
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELK-GCEP 296
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 40/322 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA------ 78
G + ++++N ++ LC K +EAE L KM + PD TYNTLI C+
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 79 -----EKNHNPSIP-----------------YVRIVELYHQMCVRELSPNETTYRSMIRL 116
+ N +P R + L+++ + + PN Y ++I+
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
++ + EA + M+EKGL P +++ +++ CK + A + M+ KG FPD
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
+ + +LI Q ++ A ++ ML G+ P TY++L+ C +F V
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 237 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
+++KG +P+L T+N L+ LC +++ DEAL +L M ++PD V++ +
Sbjct: 521 TMVEKG--------CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 297 ISGFRRIRELRKAFELKLEMDQ 318
I GF + +L A+ L +M++
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEE 594
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 38/322 (11%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKL----REAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G L ++N ++ LC G+L R ++E+ PD +TYN LI C+ K
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++V L P+ TY ++I +C V+ A I+ G P +
Sbjct: 306 EVYLGKMVN-------EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y +I C E +AL + E L KGI P+V Y LI+ L +Q +LEA L EM
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT--------------- 249
+G+ P +T++ LV C G S L +I KG+ P T
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 250 ------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
P + TYN+L++GLC + ++ +E + M E P+ +++ ++
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 298 SGFRRIRELRKAFELKLEMDQK 319
R R+L +A L EM K
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNK 560
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 151/331 (45%), Gaps = 43/331 (12%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
A+G L +FN +++ LC +G ++E E +L+K+ P+ TYN I+ C+ +
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 83 NPSIPYVRIVELYHQMCVRELSP--NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
VR+V C+ E P + TY ++I C ++ +EA L M +GL P
Sbjct: 269 GA----VRMVG-----CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
+ +Y+ +I+ +CK + A + + + G PD Y LI LCH+ A LF
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT----------- 249
E L +G+ P Y+TL++ +G + L +E+ +KG +P T
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 250 ----------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
+ P + T+N LIHG + + ALEIL M + +DPD +Y
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 294 SAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+++++G + + E M +K C P
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEK-GCAP 529
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 141/294 (47%), Gaps = 18/294 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
G + ++ +N ++K L +G + EA + +M++ P+ T+N L+ C+
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ L M + P+ T+ +I + + ++E A+ IL +M + G+ P
Sbjct: 444 DAD-------GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +++ CK + +E M++KG P++ + +L++ LC R+L EA L +E
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M + ++P T+ TL++ +C G+ + L +K Y V+S +P TYN +I
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL----FRKMEEAYKVSSSTP---TYNIII 609
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
H A ++ + M + L PD +Y ++ GF + + ++ LEM
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+ +FN ++ + K+ A +L+ M DPD TYN+L+ C+ K +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK-------FE 513
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++E Y M + +PN T+ ++ C +++EA+G+L M K ++P A ++ +I
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 150 SRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
FCKN ++ A + +M + + Y ++I + + A LFQEM+ R +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P G TY +V+ +C G + + E+++ GF+ PSL T +I+ LC
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI--------PSLTTLGRVINCLCVE 685
Query: 269 QRPDEALEILRGMPEMLLDPDEVS 292
R EA I+ M + L P+ V+
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 40/321 (12%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH---- 82
E + S+NA++ L G +A V +M D PD ++ +K+ C+ + H
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 83 ---NPS--------IPYVRIV-------------ELYHQMCVRELSPNETTYRSMIRLFC 118
N S + Y +V EL+ +M +S +T+ ++R+ C
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 119 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 178
+ V+E +L + ++G+ P+ +Y+ I C+ E+ A+ M ++++G PDV
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 179 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
Y LI LC + EA +M+ G+ P TY+TL+ YC G + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 239 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+ GF+ P TY +LI GLC + AL + + P+ + Y+ +I
Sbjct: 348 VFNGFV--------PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 299 GFRRIRELRKAFELKLEMDQK 319
G + +A +L EM +K
Sbjct: 400 GLSNQGMILEAAQLANEMSEK 420
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 10/282 (3%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIP 87
G + L ++ +V+++L GK E VL M + V + L A KN+
Sbjct: 34 VGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGK 91
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
V ++ +M + P +Y +++ + D ++A + M ++G++P S++
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
+ FCK AL + M +G +V AY ++ + E +LF +ML G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+S T++ L+ C KG+ + L D+VI++G L P+L TYN I GLC
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL--------PNLFTYNLFIQGLCQ 263
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
D A+ ++ + E PD ++Y+ +I G + + ++A
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G L +FN +++ LC KL EA +LE+M +PD VT+ TLI C+
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++ E Y ++S + TY +I F ++ V A + + M ++ L P +
Sbjct: 586 YTLFRKMEEAY------KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y ++ FCK + + +EM++ G P + G +I LC + R+ EA + M+
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 205 LRGMSP 210
+G+ P
Sbjct: 700 QKGLVP 705
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 154/299 (51%), Gaps = 22/299 (7%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
I + G + + ++N ++ +C EG+ A VL +M + PD V+YN LI+ C
Sbjct: 283 ISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRG-CS 338
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ + Y +M + + P TY ++I N++E A ++R + EKG
Sbjct: 339 NNGDLEMAFAY------RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+ + +Y+ +I+ +C++ + KA + EM+ GI P Y LI +LC + + EA
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
+LF++++ +GM P +TL++ +C G + F L E+ + S +P VT
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM--------DMMSINPDDVT 504
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
YN L+ GLC + +EA E++ M + PD +SY+ +ISG+ + + + AF ++ EM
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 35/306 (11%)
Query: 18 WNVPIRGFTAAG------------TEKGLV----SFNAVVKRLCGEGKLREAEAVL---- 57
+N+ IRG + G ++G+V ++N ++ L E K+ AE ++
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 58 EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
EK D VTYN LI C+ H + + L+ +M + P + TY S+I +
Sbjct: 390 EKGIVLDSVTYNILINGYCQ----HGDA---KKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
C +N+ EA + + KG+ P + ++ C M +A + EM I PD
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
Y L++ LC + + EAR+L EM RG+ P +Y+TL+ Y KG+ F ++DE
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 238 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
++ G F+P+L+TYNAL+ GL Q + A E+LR M + P++ S+ +VI
Sbjct: 563 MLSLG--------FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Query: 298 SGFRRI 303
+
Sbjct: 615 EAMSNL 620
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN ++ LC EGKL++A+ L M P VTYNTL++ + I R+
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR-----IEGARL 281
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ +M + P+ TY ++ C+ R E +LR M E GL P + SY+ +I
Sbjct: 282 I--ISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRG 336
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
N ++ A + EM+ +G+ P + Y LI L + ++ A L +E+ +G+
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS------------------- 252
TY+ L+ YC G+ K F L DE++ G P T S
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 253 --------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
P LV N L+ G C D A +L+ M M ++PD+V+Y+ ++ G
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 305 ELRKAFELKLEMDQK 319
+ +A EL EM ++
Sbjct: 517 KFEEARELMGEMKRR 531
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 24/267 (8%)
Query: 53 AEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCV---RELSPNETT 109
A AV+ K++ P VT L+K + KN I L+ ++ + R + +
Sbjct: 108 AIAVISKLSSPKPVT--QLLKEVVTSRKNS--------IRNLFDELVLAHDRLETKSTIL 157
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
+ ++R C V+EA+ LM EKG P ++ + I++ + + A +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
I +V+ + ++I +LC + +L +A+ M + G+ P TY+TLV+ + L+G
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 289
+ E+ KG F P + TYN ++ +C R A E+LR M E+ L PD
Sbjct: 278 GARLIISEMKSKG--------FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPD 326
Query: 290 EVSYSAVISGFRRIRELRKAFELKLEM 316
VSY+ +I G +L AF + EM
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEM 353
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 54/327 (16%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E V+F+ ++ LC EG++ EA ++++M + P +T N L+ C K +
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ R+VE Q PNE TY ++++ C + A+ +LR M E+ + A
Sbjct: 197 VLLIDRMVETGFQ-------PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 145 YSRIISRFCKNKEMGKAL----EMKV-------------------------------EML 169
YS II CK+ + A EM++ +M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
+ I PDV A+ LI + +L EA +L +EM+ RG+SP TY +L++ +C + +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 289
K H+ D ++ KG P++ T+N LI+G C D+ LE+ R M + D
Sbjct: 370 KANHMLDLMVSKG--------CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 290 EVSYSAVISGFRRIRELRKAFELKLEM 316
V+Y+ +I GF + +L A EL EM
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEM 448
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 143/297 (48%), Gaps = 24/297 (8%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLI 72
F + I+GF A ++ + +++ C G+ + +L M PD V ++ LI
Sbjct: 270 FNEMEIKGFKA-----DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+ K EL+ +M R +SP+ TY S+I FC N++++A +L L
Sbjct: 325 DCFVKEGKLREAE-------ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M KG P+ +++ +I+ +CK + LE+ +M +G+ D Y LIQ C +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
L A++LFQEM+ R + P +Y L++ C GE K + E I+K +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF-EKIEK-------SKME 489
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+ YN +IHG+C + D+A ++ +P + PD +Y+ +I G + L +A
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 56/296 (18%)
Query: 17 FWNVPIRGFTAAG----------------TEKGLVSFNAVVKRLCGEGKLREAEAVLEKM 60
+ IRGF AG +V+F+A++ EGKLREAE + ++M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 61 T----DPDCVTYNTLIKAACEAEK----NH----------NPSIPYVRIV---------- 92
PD VTY +LI C+ + NH P+I I+
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 93 ----ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
EL+ +M +R + + TY ++I+ FC+ ++E A + + M + + P SY +
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
+ C N E KALE+ ++ + D+ Y ++I +C+ ++ +A DLF + L+G+
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
P +TY+ ++ C KG S+ L ++ + G SP+ TYN LI
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG--------HSPNGCTYNILIRA 571
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 17/271 (6%)
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEA 126
T + +I C K +I++L ++ P+ T+ ++I C RV EA
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYE-------PDTVTFSTLINGLCLEGRVSEA 161
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
+ ++ M E G P + + +++ C N ++ A+ + M++ G P+ YG ++++
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 187 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 246
+C + A +L ++M R + Y +++ C G F+L +E+ KGF
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF--- 278
Query: 247 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
++ Y LI G C+ R D+ ++LR M + + PD V++SA+I F + +L
Sbjct: 279 -----KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 307 RKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
R+A EL EM Q+ D T SL+ F
Sbjct: 334 REAEELHKEMIQRGI--SPDTVTYTSLIDGF 362
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V+L+ +M P + + + + + + + + M KG++ + + S +I+
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C+ +++ A +++ G PD + LI LC + R+ EA +L M+ G P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T + LV CL G+ S L D +++ G F P+ VTY ++ +C +
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETG--------FQPNEVTYGPVLKVMCKSGQT 228
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
A+E+LR M E + D V YS +I G + L AF L EM+ K
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 8/215 (3%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
+ +YR +R + ++AV + + M P +SR+ S + K+ L++
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
+M KGI +++ ++I C R+L A +++ G P T+ TL+ CL+
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G S+ L D +++ G P+L+T NAL++GLC + +A+ ++ M E
Sbjct: 156 GRVSEALELVDRMVEMG--------HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
P+EV+Y V+ + + A EL +M++++
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 51/234 (21%)
Query: 14 LKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYN 69
L+ F + +RG A V++N +++ C GKL A+ + ++M PD V+Y
Sbjct: 407 LELFRKMSLRGVVA-----DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 70 TLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGI 129
L+ C+ N P + +E++ ++ ++ + Y +I C+ ++V++A +
Sbjct: 462 ILLDGLCD---NGEPE----KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 130 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 189
+ KG+ P +Y+ +I CK KG
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCK----------------KG----------------- 541
Query: 190 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
L EA LF++M G SP G TY+ L+ A+ +G+ +K L +E+ + GF
Sbjct: 542 --SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+VS+ ++ LC G+ +A + EK+ + D YN +I C A K +
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW---- 512
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+L+ + ++ + P+ TY MI C + + EA + R M E G SP+ +Y+ +I
Sbjct: 513 ---DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR 191
+ K+ ++ E+ G D +++ +L R
Sbjct: 570 RAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 38/319 (11%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E ++F+ ++ LC EG++ EA ++++M + PD +T NTL+ C + K
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++VE Q PN TY ++ + C + A+ +LR M E+ + A
Sbjct: 213 MLLIDKMVEYGCQ-------PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS II CK+ + A + EM KGI ++ Y +LI C+ R + L ++M+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS------------ 252
R ++P T+ L++++ +G+ + L E+I +G P +T S
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 253 ---------------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
P++ T+N LI+G C R D+ LE+ R M + D V+Y+ +I
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 298 SGFRRIRELRKAFELKLEM 316
GF + +L A EL EM
Sbjct: 446 QGFCELGKLNVAKELFQEM 464
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 139/285 (48%), Gaps = 19/285 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G ++++N ++ C G+ + +L M +P+ VT++ LI + + K
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
EL+ +M R ++P+ TY S+I FC N +++A ++ LM KG P+ +
Sbjct: 353 E-------ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I+ +CK + LE+ +M +G+ D Y LIQ C +L A++LFQEM+
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R + P TY L++ C GE K + +++ + + + YN +IHG
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK--------SKMELDIGIYNIIIHG 517
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+C + D+A ++ +P + P +Y+ +I G + L +A
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 19/282 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V ++ ++ LC G L A + +M + +TYN LI C A + + +
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA----- 318
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+L M R+++PN T+ +I F ++ EA + + M +G++P +Y+ +I
Sbjct: 319 --KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
FCK + KA +M M+ KG P++ + +LI C R+ + +LF++M LRG+
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY+TL++ +C G+ + L E++ + P++VTY L+ GLC
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSR--------KVPPNIVTYKILLDGLCDNGE 488
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
++ALEI + + ++ D Y+ +I G ++ A++L
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 133/295 (45%), Gaps = 56/295 (18%)
Query: 18 WNVPIRGFTAAG----------------TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT 61
+N+ I GF AG +V+F+ ++ EGKLREAE + ++M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 62 D----PDCVTYNTLIKAACE--------------AEKNHNPSIPYVRIV----------- 92
PD +TY +LI C+ K +P+I I+
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 93 ---ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
EL+ +M +R + + TY ++I+ FC+ ++ A + + M + + P+ +Y ++
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C N E KALE+ ++ + D+ Y ++I +C+ ++ +A DLF + L+G+
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
PG +TY+ ++ C KG S+ L ++ + G +P TYN LI
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG--------HAPDGWTYNILIRA 587
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEK 80
+ G + + +FN ++ C ++ + + KM+ D VTYNTLI+ CE K
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
+ EL+ +M R++ PN TY+ ++ CD E+A+ I + + +
Sbjct: 454 LNVAK-------ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
Y+ II C ++ A ++ + KG+ P V Y ++I LC + L EA LF
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
++M G +P G TY+ L+ A+ G+ +K L +E+ + GF
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 52/310 (16%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD--- 119
P + ++ L A + ++ Y ++ L QM ++ ++ N T MI FC
Sbjct: 86 PTVIDFSRLFSAIAKTKQ-------YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 120 --------------------------------RNRVEEAVGILRLMAEKGLSPHADSYSR 147
RV EA+ ++ M E G P + +
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
+++ C + + +A+ + +M++ G P+ YG ++ ++C + A +L ++M R
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+ Y +++ C G F+L +E+ KG + +++TYN LI G C
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG--------ITTNIITYNILIGGFCN 310
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 327
R D+ ++LR M + ++P+ V++S +I F + +LR+A EL EM + D
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI--APDT 368
Query: 328 DTNESLVKDF 337
T SL+ F
Sbjct: 369 ITYTSLIDGF 378
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 8/218 (3%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
S +YR +R + ++A+ + R M P +SR+ S K K+ L
Sbjct: 49 FSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVL 108
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
+ +M KGI +++ ++I C R+L A +++ G P T+ TL+
Sbjct: 109 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL 168
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
CL+G S+ L D +++ G P L+T N L++GLC + EA+ ++ M
Sbjct: 169 CLEGRVSEALELVDRMVEMG--------HKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
E P+ V+Y V++ + + A EL +M+++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++L+ M P + + + + + + + M KG++ + + S +I+
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINC 132
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ +++ A +++ G P+ + LI LC + R+ EA +L M+ G P
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T +TLV CL G+ ++ L D++++ G P+ VTY +++ +C +
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYG--------CQPNAVTYGPVLNVMCKSGQT 244
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
A+E+LR M E + D V YS +I G + L AF L EM+ K
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 14 LKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYN 69
L+ F + +RG A V++N +++ C GKL A+ + ++M P+ VTY
Sbjct: 423 LELFRKMSLRGVVA-----DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 70 TLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGI 129
L+ C+ ++ + +E++ ++ ++ + Y +I C+ ++V++A +
Sbjct: 478 ILLDGLCDNGESE-------KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 130 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 189
+ KG+ P +Y+ +I CK + +A + +M + G PD Y +LI+
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 190 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
++ L +E+ G S T +++
Sbjct: 591 DGDATKSVKLIEELKRCGFSVDASTIKMVID 621
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 146/293 (49%), Gaps = 19/293 (6%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE 77
I A G + L ++ VV LC G + A ++L+KM + D V Y T+I A C
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
KN N ++ L+ +M + + PN TY S+IR C+ R +A +L M E+
Sbjct: 268 Y-KNVNDAL------NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
++P+ ++S +I F K ++ +A ++ EM+ + I PD+ Y LI C RL EA+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
+F+ M+ + P TY+TL++ +C + L E+ Q+G + + VT
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--------GNTVT 432
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
YN LI GL D A +I + M + PD ++YS ++ G + +L KA
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 38/317 (11%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
L S+N ++ C +L A AVL KM +PD VT ++L+ C ++
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA----- 169
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
V L QM V E PN T+ ++I N+ EAV ++ M +G P +Y ++
Sbjct: 170 --VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ CK ++ AL + +M I DV Y +I LC+ + + +A +LF EM +G+
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-------------------- 249
P TY++L+ C G +S L ++I++ P VT
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 250 -------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
S P + TY++LI+G C R DEA + M P+ V+Y+ +I GF +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 303 IRELRKAFELKLEMDQK 319
+ + + EL EM Q+
Sbjct: 408 AKRVEEGMELFREMSQR 424
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 21/300 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V+F+A++ EGKL EAE + ++M DPD TY++LI C ++
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK---- 380
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++ M ++ PN TY ++I+ FC RVEE + + R M+++GL + +Y+ +I
Sbjct: 381 ---HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ + A ++ +M+ G+ PD+ Y +L+ LC +L +A +F+ + M
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY+ ++E C G+ + L F + P+++ Y +I G C
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDL--------FCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 329
+EA + R M E P+ +Y+ +I R+R+ KA +L + + + D T
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDAST 607
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 136/305 (44%), Gaps = 42/305 (13%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P V +N L+ A + K + ++ L +M +S + +Y +I FC R++
Sbjct: 78 PSIVEFNKLLSAIAKMNK-------FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ +L M + G P + S +++ +C K + +A+ + +M P+ +
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
LI L + EA L M+ RG P TY T+V C +G+ L + ++KG
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKG 249
Query: 243 FLPYYVTSFS----------------------------PSLVTYNALIHGLCFFQRPDEA 274
+ V ++ P++VTYN+LI LC + R +A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD--TNES 332
+L M E ++P+ V++SA+I F + +L +A +L EM ++ +D D T S
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS----IDPDIFTYSS 365
Query: 333 LVKDF 337
L+ F
Sbjct: 366 LINGF 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V+L+ +M P+ + ++ N+ + + + M +S SY+ +I+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ ++ AL + +M+ G PD+ L+ CH +R+ EA L +M + P
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T++TL+ L + S+ L D ++ +G P L TY +++GLC
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARG--------CQPDLFTYGTVVNGLCKRGDI 236
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D AL +L+ M + ++ D V Y+ +I + + A L EMD K
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEA 78
+ + G +++++ ++ LC GKL +A V E + +PD TYN +I+ C+A
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
K + +L+ + ++ + PN Y +MI FC + EEA + R M E G
Sbjct: 514 GKVEDGW-------DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
P++ +Y+ +I ++ + + E+ EM G D ++I +L H RL
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRL 620
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 149/295 (50%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +V+ ++++ C ++ +A A++++M + PD T+ TLI HN
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL----HNK 203
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V +V+ QM R P+ TY +++ C R ++ A+ +L M + +
Sbjct: 204 ASEAVALVD---QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ II CK + + A+++ EM KGI P+V Y LI LC+ R +A L ML
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ ++P T++ L++A+ +G+ + L +E+IQ+ S P +TYN LI+G
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR--------SIDPDTITYNLLING 372
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R DEA ++ + M P+ +Y+ +I+GF + + + EL EM Q+
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 40/316 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ VV LC G + A +L KM + V +NT+I + C+
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR----- 272
Query: 85 SIPYVRI-VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+V + V+L+ +M + + PN TY S+I C+ R +A +L M EK ++P+
Sbjct: 273 ---HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ +I F K ++ +A ++ EM+ + I PD Y LLI C RL EA+ +F+ M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS----------- 252
+ + P +TY+TL+ +C L E+ Q+G + VT +
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 253 ----------------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
++TY+ L+HGLC + + D AL I + + + ++ + Y+ +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 297 ISGFRRIRELRKAFEL 312
I G + ++ +A++L
Sbjct: 510 IEGMCKAGKVGEAWDL 525
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 160/343 (46%), Gaps = 33/343 (9%)
Query: 6 RVSSTVATLKTFWNVPIRG--FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT-- 61
++ S VA + F V G G L +++ + C +L A AVL KM
Sbjct: 88 KLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 62 --DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
+PD VT ++L+ C +++ + V L QM P+ T+ ++I
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDA-------VALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
N+ EAV ++ M ++G P +Y +++ CK ++ AL + +M I +V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
+ +I LC R + A DLF EM +G+ P TY++L+ C G +S L ++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD--EALEILRGMPEMLLDPDEVSYSAVI 297
+K +P++VT+NALI FF+ EA ++ M + +DPD ++Y+ +I
Sbjct: 321 EK--------KINPNVVTFNALIDA--FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 298 SGF---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
+GF R+ E ++ F+ + D C P Q N +L+ F
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKD----CLPNIQTYN-TLINGF 408
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 22/288 (7%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPY 88
+V+FNA++ EGKL EAE + E+M DPD +TYN LI C +
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK--- 383
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+++ M ++ PN TY ++I FC RVE+ V + R M+++GL + +Y+ I
Sbjct: 384 ----QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I F + + A + +M+ + D+ Y +L+ LC +L A +F+ + M
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
Y+T++E C G+ + + L + S P +VTYN +I GLC
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDL-----------FCSLSIKPDVVTYNTMISGLCSK 548
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+ EA ++ R M E P+ +Y+ +I R + + EL EM
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 38/294 (12%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P V +N L+ A + K + ++ L QM +S + TY I FC R++
Sbjct: 81 PSIVEFNKLLSAVAKMNK-------FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ +L M + G P + S +++ +C +K + A+ + +M++ G PD +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD------ 236
LI L + EA L +M+ RG P TY T+V C +G+ +L +
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 237 ---------------------EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 275
EV F P++VTYN+LI+ LC + R +A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 276 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 329
+L M E ++P+ V+++A+I F + +L +A +L EM Q+ +D DT
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS----IDPDT 363
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V+L+ M P+ + ++ N+ E + + M G+S +YS I+
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ ++ AL + +M+ G PD+ L+ CH +R+ +A L +M+ G P
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T+ TL+ L + S+ L D+++Q+G P LVTY +++GLC
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRG--------CQPDLVTYGTVVNGLCKRGDI 239
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D AL +L M + + V ++ +I + R + A +L EM+ K
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVR 90
+++N ++ C +L EA+ + + M DC+ TYNTLI C+ ++ +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG------ 417
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLF--------------------------------- 117
VEL+ +M R L N TY ++I+ F
Sbjct: 418 -VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 118 --CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
C +++ A+ I + + + + + Y+ +I CK ++G+A ++ + I P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKP 533
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
DV Y +I LC +R L EA DLF++M G P TY+TL+ A + + L
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 236 DEVIQKGFL 244
E+ GF+
Sbjct: 594 KEMRSSGFV 602
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYV 89
+++++ ++ LC GKL A + + + + YNT+I+ C+A K
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK--------- 518
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ E + C + P+ TY +MI C + ++EA + R M E G P++ +Y+ +I
Sbjct: 519 -VGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
++ + + E+ EM G D L+ +L H RL
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRL 620
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 135 EKGLSPHADSYSRII-SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
E+ + + Y I+ +R ++ A+++ +M+ FP + + L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 194 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 253
L ++M G+S TY + +C + + S + ++++ G + P
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG--------YEP 151
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 313
+VT ++L++G C +R +A+ ++ M EM PD +++ +I G + +A L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 314 LEMDQKETCWP 324
+M Q+ C P
Sbjct: 212 DQMVQR-GCQP 221
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 142/293 (48%), Gaps = 19/293 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
AG + FN ++ + C EG + +A+ V +++T P V++NTLI C+ N +
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV-GNLD 292
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
L HQM P+ TY ++I C N+++ A G+ M ++GL P+
Sbjct: 293 EGF------RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
++ +I +N E+ E +ML KG+ PD+ Y L+ C L+ AR++ M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ RG+ P TY TL++ +C G+ ++ E+ Q G V ++AL+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG--------IELDRVGFSALVC 458
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
G+C R +A LR M + PD+V+Y+ ++ F + + + F+L EM
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 19/291 (6%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPS 85
T + +++A++ LC E K+ A + ++M P+ V + TLI + N
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG-----HSRNGE 360
Query: 86 IPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
I ++ E Y +M + L P+ Y +++ FC + A I+ M +GL P +Y
Sbjct: 361 IDLMK--ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+ +I FC+ ++ ALE++ EM GI D + L+ +C + R+++A +EML
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
G+ P TY +++A+C KG+ F L E+ G + PS+VTYN L++GL
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV--------PSVVTYNVLLNGL 530
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
C + A +L M + + PD+++Y+ ++ G R K + K E+
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 8/233 (3%)
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
P I Y ++ N + ++ FC + +A + + ++ L P S++
Sbjct: 220 PTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
+I+ +CK + + +K +M PDV Y LI LC + ++ A LF EM R
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
G+ P + TL+ + GE + +++ KG P +V YN L++G C
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL--------QPDIVLYNTLVNGFC 391
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
A I+ GM L PD+++Y+ +I GF R ++ A E++ EMDQ
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN 444
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 19/265 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G +V++N ++ LC E KL EA V+++M +P+ +TYNTLI C K
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK---- 353
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + L + R LSP+ TY ++ FC + A +++ M E+G+ P +
Sbjct: 354 ---LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I F ++ M KA+++++ M + G+ PDVH Y +LI C + ++ EA LF+ M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P Y+T++ YC +G + L E+ +K +P++ +Y +I
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK--------ELAPNVASYRYMIEV 522
Query: 265 LCFFQRPDEALEILRGMPEMLLDPD 289
LC ++ EA ++ M + +DP
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPS 547
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 143/285 (50%), Gaps = 19/285 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNP 84
G L ++N V+ +LC +G+ ++A V ++M + + VTYNTLI C K +
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++V+ QM ++PN TY ++I FC ++ +A+ + R + +GLSP +
Sbjct: 323 N----KVVD---QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++S FC+ + A +M EM ++GI P Y +LI + +A L M
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY L+ +C+KG+ ++ L +++K + P+ V YN +I G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK--------NCEPNEVIYNTMILG 487
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
C AL++L+ M E L P+ SY +I + R+ ++A
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 59/344 (17%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC---EAEKNHNPSIPY 88
SF ++K C G++ ++ +L ++T+ P+ V Y TLI C E EK +
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 89 VRI-------------------------VELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
++ E+Y +M + PN TY ++ C R
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
++A + M E+G+S + +Y+ +I C+ ++ +A ++ +M GI P++ Y L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
I C +L +A L +++ RG+SP TY+ LV +C KG+ S + E+ ++G
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 244 LPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEALE 276
P VT P + TY+ LIHG C + +EA
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 277 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
+ + M E +P+EV Y+ +I G+ + +A +L EM++KE
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 101/265 (38%), Gaps = 63/265 (23%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y +I + + ++ M + G P ++ ++ +++ + + E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
K + DV+++G+LI+ C + ++ DL E+ G SP Y TL++ C KGE
Sbjct: 157 SKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 230 KV-----------------------------------FHLQDEVIQKGFLPYYVT----- 249
K F + +++ + G P T
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 250 ----------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
S ++VTYN LI GLC + +EA +++ M ++
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 288 PDEVSYSAVISGFRRIRELRKAFEL 312
P+ ++Y+ +I GF + +L KA L
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSL 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD TY+ LI C + + S L+ M + PNE Y +MI +C
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEAS-------RLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
A+ +L+ M EK L+P+ SY +I CK ++ +A + +M+D GI P L
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSL 553
Query: 183 L 183
+
Sbjct: 554 I 554
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 44/356 (12%)
Query: 5 LRVSSTVATLKTFWNVPIRGFTAAG------------TEKGL-VS---FNAVVKRLCGEG 48
L++ + TL+TF + I GF G E+GL VS N ++ G
Sbjct: 266 LKLKGFMPTLETFGTM-INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG 324
Query: 49 -KLREAEAV---LEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELS 104
K+ AE++ + PD TYN LI C+ K V + + L
Sbjct: 325 YKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE-------VAVGFLDEASKKGLI 377
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
PN +Y +I+ +C + A +L MAE+G P +Y +I + M A+ M
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
KV+++D+G+ PD Y +L+ LC R L A+ LF EML R + P Y TL++ +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 225 KGEFS---KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
G+F KVF L ++KG +V +NA+I G C DEAL + M
Sbjct: 498 SGDFDEARKVFSLS---VEKG--------VKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Query: 282 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
E L PD+ +YS +I G+ + +++ A ++ M +K C P + T SL+ F
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM-EKNKCKP-NVVTYTSLINGF 600
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 134/340 (39%), Gaps = 62/340 (18%)
Query: 40 VVKRLCGEGKLREAEAVLE----KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELY 95
+VK +C EGK+ ++E K P+ V YNT+I C+ N + ++
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYL-------VF 263
Query: 96 HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL----------------- 138
++ ++ P T+ +MI FC + +L + E+GL
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRH 323
Query: 139 ------------------SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
P +Y+ +I+R CK + A+ E KG+ P+ +Y
Sbjct: 324 GYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY 383
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
LIQ C + A L +M RG P TY L+ + G +++ ++I
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+G SP YN L+ GLC R A + M + + PD Y+ +I GF
Sbjct: 444 RG--------VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 301 RR---IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
R E RK F L +E K +D + +++K F
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVK-----VDVVHHNAMIKGF 530
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +V++ ++ L G + +A + K+ D PD YN L+ C+ +
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR---- 465
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ L+ +M R + P+ Y ++I F +EA + L EKG+
Sbjct: 466 ---FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I FC++ + +AL M ++ + PD Y +I Q+ + A +F+ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
P TY +L+ +C +G+F ++ ++ F + P++VTY LI
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDF--------KMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 265 LCFFQRPDEALEILRGMPEMLLD----PDEVSYSAVISGFRR 302
L + LE E+++ P+EV+++ ++ GF +
Sbjct: 635 L---AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 34/257 (13%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +V NA++K C G L EA A + +M + PD TY+T+I + +
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD---- 570
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++++ M + PN TY S+I FC + + A + M + L P+ +
Sbjct: 571 ---MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 145 YSRIISRFCK-NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR--RLLEARD--- 198
Y+ +I K + + KA+ M+ P+ + L+Q + ++L D
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSN 687
Query: 199 -----LFQEMLLR----GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
LF E R G S Y++ + C+ G QD++++KG
Sbjct: 688 HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG------- 740
Query: 250 SFSPSLVTYNALIHGLC 266
FSP V++ A++HG C
Sbjct: 741 -FSPDPVSFAAILHGFC 756
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 121/324 (37%), Gaps = 65/324 (20%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC------EA 78
G +N ++ LC G+ A+ + +M D PD Y TLI EA
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
K + S+ V++ H + +MI+ FC ++EA+ + M E+ L
Sbjct: 505 RKVFSLSVEKGVKVDVVH-------------HNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
P +YS II + K ++M A+++ M P+V Y LI C Q A +
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAY---------------------CLKGEFS-------- 229
F+EM LR + P TY TL+ + C+ E +
Sbjct: 612 TFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Query: 230 ------KVF-------HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 276
KV H Q + + F +S YN+ + LC A
Sbjct: 672 VKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACM 731
Query: 277 ILRGMPEMLLDPDEVSYSAVISGF 300
M + PD VS++A++ GF
Sbjct: 732 FQDKMVKKGFSPDPVSFAAILHGF 755
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 116/262 (44%), Gaps = 16/262 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD + N+L+ ++ + + ++Y +MC R S + + +++ C+ +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDAR-------KVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
VE ++ KG P+ Y+ II +CK ++ A + E+ KG P + +G
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+I C + + + L E+ RG+ + +++A G + D G
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG------YKVDPAESIG 334
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
++ P + TYN LI+ LC + + A+ L + L P+ +SY+ +I + +
Sbjct: 335 WI--IANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 303 IRELRKAFELKLEMDQKETCWP 324
+E A +L L+M ++ C P
Sbjct: 393 SKEYDIASKLLLQMAER-GCKP 413
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +V+ ++++ C ++ +A A++++M + PD +T+ TLI HN
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL----HNK 130
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V +V+ +M R PN TY ++ C R ++ A +L M +
Sbjct: 131 ASEAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ II CK + + AL + EM KGI P+V Y LI LC R +A L +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ ++P T++ L++A+ +G+F + L D++I++ S P + TYN+LI+G
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--------SIDPDIFTYNSLING 299
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C R D+A ++ M PD +Y+ +I GF + + + EL EM +
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 152/312 (48%), Gaps = 23/312 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G +V++++++ LC G+ +A +L EK +P+ VT+N LI A + K
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK---- 270
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+V +L+ M R + P+ TY S+I FC +R+++A + M K P D+
Sbjct: 271 ---FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I FCK+K + E+ EM +G+ D Y LIQ L H A+ +F++M+
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY L++ C G+ K + D +QK + + Y +I G
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQK-------SEIKLDIYIYTTMIEG 439
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+C + D+ ++ + + P+ V+Y+ +ISG R L++A+ L +M + P
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED---GP 496
Query: 325 L-DQDTNESLVK 335
L D T +L++
Sbjct: 497 LPDSGTYNTLIR 508
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 163/341 (47%), Gaps = 29/341 (8%)
Query: 6 RVSSTVATLKTFWNVPIRG--FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT-- 61
++ S +A +K F V G G L ++N ++ C ++ A A+L KM
Sbjct: 15 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 74
Query: 62 --DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
+P VT ++L+ C ++ + V L QM P+ T+ ++I
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDA-------VALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
N+ EAV ++ M ++G P+ +Y +++ CK ++ A + +M I DV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
+ +I LC R + +A +LF+EM +G+ P TY +L+ C G +S L ++I
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
+K +P+LVT+NALI + EA ++ M + +DPD +Y+++I+G
Sbjct: 248 EK--------KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 300 F---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
F R+ + ++ FE + D C+P D DT +L+K F
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKD----CFP-DLDTYNTLIKGF 335
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 19/296 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ VV LC G + A +L KM + D V +NT+I + C+ +
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ +M + + PN TY S+I C R +A +L M EK ++P+ +
Sbjct: 205 -------LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I F K + +A ++ +M+ + I PD+ Y LI C RL +A+ +F+ M+
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P TY+TL++ +C L E+ +G + VTY LI G
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV--------GDTVTYTTLIQG 369
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
L D A ++ + M + PD ++YS ++ G +L KA E+ M + E
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 21/291 (7%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
AA E +V FN ++ LC + +A + ++M P+ VTY++LI C +
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ S +L M ++++PN T+ ++I F + EA + M ++ + P
Sbjct: 238 DAS-------QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +I+ FC + + KA +M M+ K FPD+ Y LI+ C +R+ + +LF+E
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-EVIQKGFLPYYVTSFSPSLVTYNAL 261
M RG+ TY TL++ +FH D + QK F P ++TY+ L
Sbjct: 351 MSHRGLVGDTVTYTTLIQG---------LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+ GLC + ++ALE+ M + + D Y+ +I G + ++ ++L
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 15/258 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P +N L+ A + +K + ++ L +M +S N TY +I FC R++
Sbjct: 8 PSIFEFNKLLSAIAKMKK-------FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
LI L + EA L M+ RG P TY +V C +G+ F+L +++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM---- 176
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+V +N +I LC ++ D+AL + + M + P+ V+YS++IS
Sbjct: 177 ----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 303 IRELRKAFELKLEMDQKE 320
A +L +M +K+
Sbjct: 233 YGRWSDASQLLSDMIEKK 250
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEA 78
+ + G +++++ ++ LC GKL +A V + M D Y T+I+ C+A
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
K + +L+ + ++ + PN TY +MI C + ++EA +L+ M E G
Sbjct: 444 GKVDDGW-------DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
P + +Y+ +I ++ + + E+ EM D GL+ +L H RL
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRL 550
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 18 WNVPIRGFTAA-----GTE-------KGLV----SFNAVVKRLCGEGKLREAEAVLEKMT 61
+N I+GF + GTE +GLV ++ +++ L +G A+ V ++M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 62 D----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
PD +TY+ L+ C K + +E++ M E+ + Y +MI
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGK-------LEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
C +V++ + ++ KG+ P+ +Y+ +IS C + + +A + +M + G PD
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEM 203
Y LI+ + +L +EM
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREM 526
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 143/299 (47%), Gaps = 25/299 (8%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHN 83
AG +V+FN V+ L G+ EA E ++E+ +P +TY+ L+K A+
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK---- 344
Query: 84 PSIPYVRIVELY---HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
RI + Y +M + PN Y ++I F + + +A+ I LM KGLS
Sbjct: 345 ------RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
+ +Y+ +I +CKN + A + EML G + ++ +I LLC A
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 260
EMLLR MSPGG TL+ C G+ SK L + + KGF+ TS NA
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--------NA 510
Query: 261 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
L+HGLC + DEA I + + D VSY+ +ISG ++L +AF EM ++
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 21/290 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAV----LEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
++ LC GK +A + L K D T N L+ CEA K RI
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA----FRIQ 528
Query: 93 -ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E+ + CV + +Y ++I C + +++EA L M ++GL P +YS +I
Sbjct: 529 KEILGRGCVMD----RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
++ +A++ + G+ PDV+ Y ++I C R E ++ F EM+ + + P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
Y+ L+ AYC G S L++++ KG SP+ TY +LI G+ R
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKG--------ISPNSATYTSLIKGMSIISRV 696
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
+EA + M L+P+ Y+A+I G+ ++ ++ K L EM K
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 19/281 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
VS+N ++ CG+ KL EA L++M PD TY+ LI K
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA------ 594
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
++ + + P+ TY MI C R EE M K + P+ Y+ +I
Sbjct: 595 -IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+C++ + ALE++ +M KGI P+ Y LI+ + R+ EA+ LF+EM + G+ P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y L++ Y G+ KV L E+ K + P+ +TY +I G
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSK--------NVHPNKITYTVMIGGYARDGN 765
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
EA +L M E + PD ++Y I G+ + + +AF+
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 138/329 (41%), Gaps = 38/329 (11%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACE 77
++ T G ++ +N ++ G L +A + ++ K TYNTLIK C+
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ N L +M + N+ ++ S+I L C + A+ + M +
Sbjct: 413 NGQADNAE-------RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+SP + +IS CK+ + KALE+ + L+KG D L+ LC +L EA
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-------- 249
+ +E+L RG +Y+TL+ C K + + F DE++++G P T
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 250 -------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
P + TY+ +I G C +R +E E M + P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 291 VSYSAVISGFRRIRELRKAFELKLEMDQK 319
V Y+ +I + R L A EL+ +M K
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHK 674
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 19/286 (6%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRIVE 93
NA++ LC GKL EA + +++ CV +YNTLI C +K + + ++
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC-GKKKLDEAFMFL---- 563
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
+M R L P+ TY +I + N+VEEA+ G+ P +YS +I C
Sbjct: 564 --DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
K + + E EM+ K + P+ Y LI+ C RL A +L ++M +G+SP
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
TY +L++ + + L +E+ +G P++ Y ALI G + +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGL--------EPNVFHYTALIDGYGKLGQMVK 733
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+LR M + P++++Y+ +I G+ R + +A L EM +K
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 116/235 (49%), Gaps = 16/235 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P T N L+ + A + + + E + +C + +SP+ + + I FC +
Sbjct: 224 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGK 275
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
VEEAV + M E G++P+ +++ +I +A K +M+++G+ P + Y +
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L++ L +R+ +A + +EM +G P Y+ L++++ G +K ++D ++ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
S + TYN LI G C + D A +L+ M + + ++ S+++VI
Sbjct: 396 --------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLI 72
FW+ R G + +++ ++ C + E + ++M P+ V YN LI
Sbjct: 597 FWDDCKRN----GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+A C + + +EL M + +SPN TY S+I+ +RVEEA +
Sbjct: 653 RAYCRSGR-------LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M +GL P+ Y+ +I + K +M K + EM K + P+ Y ++I
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
+ EA L EM +G+ P TY + Y +G + F DE
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
AL++ + +KG+FP +L+ L + + F +++ +G+SP + T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
A+C G+ + L ++ + G +P++VT+N +I GL R DEA
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
M E ++P ++YS ++ G R + + A+ + EM +K
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 143/299 (47%), Gaps = 25/299 (8%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHN 83
AG +V+FN V+ L G+ EA E ++E+ +P +TY+ L+K A+
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK---- 344
Query: 84 PSIPYVRIVELY---HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
RI + Y +M + PN Y ++I F + + +A+ I LM KGLS
Sbjct: 345 ------RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
+ +Y+ +I +CKN + A + EML G + ++ +I LLC A
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 260
EMLLR MSPGG TL+ C G+ SK L + + KGF+ TS NA
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--------NA 510
Query: 261 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
L+HGLC + DEA I + + D VSY+ +ISG ++L +AF EM ++
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 21/290 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAV----LEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
++ LC GK +A + L K D T N L+ CEA K RI
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA----FRIQ 528
Query: 93 -ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E+ + CV + +Y ++I C + +++EA L M ++GL P +YS +I
Sbjct: 529 KEILGRGCVMD----RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
++ +A++ + G+ PDV+ Y ++I C R E ++ F EM+ + + P
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
Y+ L+ AYC G S L++++ KG SP+ TY +LI G+ R
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKG--------ISPNSATYTSLIKGMSIISRV 696
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
+EA + M L+P+ Y+A+I G+ ++ ++ K L EM K
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 19/281 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
VS+N ++ CG+ KL EA L++M PD TY+ LI K
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA------ 594
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
++ + + P+ TY MI C R EE M K + P+ Y+ +I
Sbjct: 595 -IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+C++ + ALE++ +M KGI P+ Y LI+ + R+ EA+ LF+EM + G+ P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y L++ Y G+ KV L E+ K + P+ +TY +I G
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSK--------NVHPNKITYTVMIGGYARDGN 765
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
EA +L M E + PD ++Y I G+ + + +AF+
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 138/329 (41%), Gaps = 38/329 (11%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACE 77
++ T G ++ +N ++ G L +A + ++ K TYNTLIK C+
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ N L +M + N+ ++ S+I L C + A+ + M +
Sbjct: 413 NGQADNAE-------RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+SP + +IS CK+ + KALE+ + L+KG D L+ LC +L EA
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-------- 249
+ +E+L RG +Y+TL+ C K + + F DE++++G P T
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 250 -------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
P + TY+ +I G C +R +E E M + P+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 291 VSYSAVISGFRRIRELRKAFELKLEMDQK 319
V Y+ +I + R L A EL+ +M K
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHK 674
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 19/286 (6%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRIVE 93
NA++ LC GKL EA + +++ CV +YNTLI C +K + + ++
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC-GKKKLDEAFMFL---- 563
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
+M R L P+ TY +I + N+VEEA+ G+ P +YS +I C
Sbjct: 564 --DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
K + + E EM+ K + P+ Y LI+ C RL A +L ++M +G+SP
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
TY +L++ + + L +E+ +G P++ Y ALI G + +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGL--------EPNVFHYTALIDGYGKLGQMVK 733
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+LR M + P++++Y+ +I G+ R + +A L EM +K
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 116/235 (49%), Gaps = 16/235 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P T N L+ + A + + + E + +C + +SP+ + + I FC +
Sbjct: 224 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGK 275
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
VEEAV + M E G++P+ +++ +I +A K +M+++G+ P + Y +
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L++ L +R+ +A + +EM +G P Y+ L++++ G +K ++D ++ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
S + TYN LI G C + D A +L+ M + + ++ S+++VI
Sbjct: 396 --------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 15/225 (6%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLI 72
FW+ R G + +++ ++ C + E + ++M P+ V YN LI
Sbjct: 597 FWDDCKRN----GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+A C + + +EL M + +SPN TY S+I+ +RVEEA +
Sbjct: 653 RAYCRSGR-------LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M +GL P+ Y+ +I + K +M K + EM K + P+ Y ++I
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
+ EA L EM +G+ P TY + Y +G + F DE
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
AL++ + +KG+FP +L+ L + + F +++ +G+SP + T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
A+C G+ + L ++ + G +P++VT+N +I GL R DEA
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
M E ++P ++YS ++ G R + + A+ + EM +K
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 21/297 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEK-NHN 83
G E LV+F +++ C ++ +A A+ +++ P+ VTY TLI+ C+ NH
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH- 206
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
VEL++QM PN TY +++ C+ R +A +LR M ++ + P+
Sbjct: 207 -------AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ +I F K ++ +A E+ M+ ++PDV YG LI LC L EAR +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G P Y TL+ +C + E+ QKG + + +TY LI
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV--------ANTITYTVLIQ 371
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
G C RPD A E+ M PD +Y+ ++ G ++ KA + M ++E
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G+ +V++NA+V LC G+ +A +L M +P+ +T+ LI A + K
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK---- 273
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ELY+ M + P+ TY S+I C ++EA + LM G P+
Sbjct: 274 ---LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I FCK+K + +++ EM KG+ + Y +LIQ C R A+++F +M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R P RTY+ L++ C G+ K + + + ++ ++VTY +I G
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR--------EMDINIVTYTIIIQG 442
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+C + ++A ++ + + P+ ++Y+ +ISGF R
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 31/273 (11%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC------EAEK 80
E +++F A++ GKL EA+ + M PD TY +LI C EA
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR- 313
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
++++ M PNE Y ++I FC RVE+ + I M++KG+
Sbjct: 314 ------------QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
+ +Y+ +I +C A E+ +M + PD+ Y +L+ LC ++ +A +F
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 260
+ M R M TY +++ C G+ F L + KG P+++TY
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG--------MKPNVITYTT 473
Query: 261 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
+I G C EA + + M E P+E Y
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
Y ++ L+ QM + + P T ++ C ++ A L M + G P +++
Sbjct: 99 YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
+++ +C + A+ + ++L G P+V Y LI+ LC R L A +LF +M G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------------ 249
P TY+ LV C G + L +++++ P +T
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 250 ---------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
S P + TY +LI+GLC + DEA ++ M P+EV Y+ +I GF
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 301 RRIRELRKAFELKLEMDQK 319
+ + + ++ EM QK
Sbjct: 339 CKSKRVEDGMKIFYEMSQK 357
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 8/227 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++L+ +M P+ + ++ + NR + + + M G+ P + + ++
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C + + +A +M+ G PD+ + L+ CH R+ +A LF ++L G P
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY TL+ C + L +++ G P++VTYNAL+ GLC R
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNG--------SRPNVVTYNALVTGLCEIGRW 239
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+A +LR M + ++P+ ++++A+I F ++ +L +A EL M Q
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 23/276 (8%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + ++N ++ C G+ +A+ +L M +PD +T+N LI A+ + K
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK---- 381
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+L +M R + P+ TY SMI FC NR ++A + LMA SP +
Sbjct: 382 ---LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVT 434
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ II +C+ K + + +++ E+ +G+ + Y LI C L A+DLFQEM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P T + L+ +C + + L EVIQ ++ V YN +IHG
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQ-------MSKIDLDTVAYNIIIHG 546
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+C + DEA ++ +P ++PD +Y+ +ISGF
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 23/293 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYV 89
+++FN ++ LC EG++ EA A++ KM D VTY T++ C+ +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA----- 280
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ L +M + P+ Y ++I C +A + M EKG++P+ +Y+ +I
Sbjct: 281 --LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
FC A + +M+++ I PDV + LI + +L EA L EML R +
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY++++ +C F H+ D + SP +VT+N +I C +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA------------SPDVVTFNTIIDVYCRAK 446
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
R DE +++LR + L + +Y+ +I GF + L A +L EM C
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 149/325 (45%), Gaps = 43/325 (13%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEK--------N 81
+ SFN ++K C KL + + K+T PD VT+NTL+ C ++
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ ++ V L+ QM L+P T+ ++I C RV EA ++ M KGL
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+Y I++ CK + AL + +M + I PDV Y +I LC +A+ LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------ 249
EML +G++P TY+ +++ +C G +S L ++I++ P +T
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 250 ---------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
P VTYN++I+G C R D+A + M +++ PD V+++
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFN 436
Query: 295 AVISGFRRIRELRKAFELKLEMDQK 319
+I + R + + + +L E+ ++
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRR 461
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 138/287 (48%), Gaps = 23/287 (8%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+++FNA++ EGKL EAE + ++M PD VTYN++I C+ HN
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK----HN------ 415
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
R + H + SP+ T+ ++I ++C RV+E + +LR ++ +GL + +Y+ +I
Sbjct: 416 RFDDAKHMFDLMA-SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
FC+ + A ++ EM+ G+ PD +L+ C +L EA +LF+ + + +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
Y+ ++ C + + + L F + P + TYN +I G C
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDL--------FCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+A + M + +PD +Y+ +I G + E+ K+ EL EM
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V+FN ++ C ++ E +L +++ + TYNTLI CE + N N +
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD-NLNAA---- 486
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+L+ +M + P+ T ++ FC+ ++EEA+ + ++ + +Y+ II
Sbjct: 487 --QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
CK ++ +A ++ + G+ PDV Y ++I C + + +A LF +M G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 210 PGGRTYDTLVEAYCLK-GEFSKVFHLQDEVIQKGF 243
P TY+TL+ CLK GE K L E+ GF
Sbjct: 605 PDNSTYNTLIRG-CLKAGEIDKSIELISEMRSNGF 638
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 60/296 (20%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVE--------------------------- 124
+ LY +M +R + N ++ +I+ FCD +++
Sbjct: 126 ISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG 185
Query: 125 -----------------------EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
EAV + M E GL+P +++ +I+ C + +A
Sbjct: 186 LCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
+ +M+ KG+ DV YG ++ +C A +L +M + P Y +++
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
C G S +L E+++KG +P++ TYN +I G C F R +A +LR M
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKG--------IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 282 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
E ++PD ++++A+IS + +L +A +L EM + C D T S++ F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSMIYGF 411
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 23/200 (11%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
+I +F NR + A+ + R M + + + S++ +I FC ++ +L ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 173 IFPDVHAYGLLIQLLCHQRRL---------------LEARDLFQEMLLRGMSPGGRTYDT 217
PDV + L+ LC + R+ LEA LF +M+ G++P T++T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 218 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 277
L+ CL+G + L ++++ KG +VTY +++G+C AL +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKG--------LHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 278 LRGMPEMLLDPDEVSYSAVI 297
L M E + PD V YSA+I
Sbjct: 284 LSKMEETHIKPDVVIYSAII 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 7/180 (3%)
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+++I F + A+ + +M + I +++++ +LI+ C +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------TSFSPSLVTY 258
G P T++TL+ CL+ S+ L +++ GFL +P ++T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
N LI+GLC R EA ++ M L D V+Y +++G ++ + + A L +M++
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 11/206 (5%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
+R + G ++N ++ C L A+ + ++M PD +T N L+ CE
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
EK +EL+ + + ++ + Y +I C ++V+EA + + G
Sbjct: 515 NEKLEEA-------LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+ P +Y+ +IS FC + A + +M D G PD Y LI+ + ++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYC 223
+L EM G S T E C
Sbjct: 628 ELISEMRSNGFSGDAFTIKMAEEIIC 653
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 146/301 (48%), Gaps = 23/301 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G V++N++V LC G+ +A ++ M P+ +T+ +I + K
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK---- 259
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++LY +M R + P+ TY S+I C RV+EA +L LM KG P +
Sbjct: 260 ---FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FCK+K + + ++ EM +G+ D Y +IQ R A+++F M
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R P RTY L+ C+ K L E +QK + +T TYN +IHG
Sbjct: 377 SR---PNIRTYSILLYGLCMNWRVEKALVLF-ENMQKSEIELDIT-------TYNIVIHG 425
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+C ++A ++ R + L PD VSY+ +ISGF R R+ K+ L +M Q++ P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM-QEDGLLP 484
Query: 325 L 325
L
Sbjct: 485 L 485
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 19/297 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNH 82
G L S+N V+ LC + A +V+ KM +PD VT ++LI C+ +
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ ++L +M P+ Y ++I C V +AV + M G+ A
Sbjct: 157 DA-------IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +++ C + A + +M+ + I P+V + +I + + + EA L++E
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M R + P TY++L+ C+ G + + D ++ KG LP +VTYN LI
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP--------DVVTYNTLI 321
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+G C +R DE ++ R M + L D ++Y+ +I G+ + A E+ MD +
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 10/244 (4%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++L+ +M P+ + ++ + + + M G+ SY+ +I+
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C+ AL + +M+ G PDV LI C R+ +A DL +M G P
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
Y+T+++ C G + L D + + G VTYN+L+ GLC R
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDG--------VRADAVTYNSLVAGLCCSGRW 225
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 331
+A ++R M + P+ ++++AVI F + + +A +L EM ++ C D T
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR--CVDPDVFTYN 283
Query: 332 SLVK 335
SL+
Sbjct: 284 SLIN 287
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 136/276 (49%), Gaps = 23/276 (8%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + ++N ++ C G+ +A+ +L M +PD +T+N LI A+ + K
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK---- 381
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+L +M R + P+ TY SMI FC NR ++A + LMA SP +
Sbjct: 382 ---LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVT 434
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ II +C+ K + + +++ E+ +G+ + Y LI C L A+DLFQEM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P T + L+ +C + + L EVIQ ++ V YN +IHG
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQ-------MSKIDLDTVAYNIIIHG 546
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+C + DEA ++ +P ++PD +Y+ +ISGF
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 149/325 (45%), Gaps = 43/325 (13%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEK--------N 81
+ SFN ++K C KL + + K+T PD VT+NTL+ C ++
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ ++ V L+ QM L+P T+ ++I C RV EA ++ M KGL
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+Y I++ CK + AL + +M + I PDV Y +I LC +A+ LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------ 249
EML +G++P TY+ +++ +C G +S L ++I++ P +T
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 250 ---------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
P VTYN++I+G C R D+A + M +++ PD V+++
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFN 436
Query: 295 AVISGFRRIRELRKAFELKLEMDQK 319
+I + R + + + +L E+ ++
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRR 461
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 23/293 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYV 89
+++FN ++ LC EG++ EA A++ KM D VTY T++ C+ +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA----- 280
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ L +M + P+ Y ++I C +A + M EKG++P+ +Y+ +I
Sbjct: 281 --LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
FC A + +M+++ I PDV + LI + +L EA L EML R +
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY++++ +C F H+ D + SP +VT+N +I C +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA------------SPDVVTFNTIIDVYCRAK 446
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
R DE +++LR + L + +Y+ +I GF + L A +L EM C
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 138/287 (48%), Gaps = 23/287 (8%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+++FNA++ EGKL EAE + ++M PD VTYN++I C+ HN
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK----HN------ 415
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
R + H + SP+ T+ ++I ++C RV+E + +LR ++ +GL + +Y+ +I
Sbjct: 416 RFDDAKHMFDLMA-SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
FC+ + A ++ EM+ G+ PD +L+ C +L EA +LF+ + + +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
Y+ ++ C + + + L F + P + TYN +I G C
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDL--------FCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+A + M + +PD +Y+ +I G + E+ K+ EL EM
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHN----------- 83
V++N+++ C + +A+ + + M PD VT+NT+I C A++
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 84 ----PSIPYVRIV-------------ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEA 126
+ Y ++ +L+ +M + P+ T ++ FC+ ++EEA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
+ + ++ + +Y+ II CK ++ +A ++ + G+ PDV Y ++I
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 187 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK-GEFSKVFHLQDEVIQKGF 243
C + + +A LF +M G P TY+TL+ CLK GE K L E+ GF
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG-CLKAGEIDKSIELISEMRSNGF 638
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 60/296 (20%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVE--------------------------- 124
+ LY +M +R + N ++ +I+ FCD +++
Sbjct: 126 ISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG 185
Query: 125 -----------------------EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
EAV + M E GL+P +++ +I+ C + +A
Sbjct: 186 LCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
+ +M+ KG+ DV YG ++ +C A +L +M + P Y +++
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
C G S +L E+++KG +P++ TYN +I G C F R +A +LR M
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKG--------IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 282 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
E ++PD ++++A+IS + +L +A +L EM + C D T S++ F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSMIYGF 411
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 23/200 (11%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
+I +F NR + A+ + R M + + + S++ +I FC ++ +L ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 173 IFPDVHAYGLLIQLLCHQRRL---------------LEARDLFQEMLLRGMSPGGRTYDT 217
PDV + L+ LC + R+ LEA LF +M+ G++P T++T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 218 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 277
L+ CL+G + L ++++ KG +VTY +++G+C AL +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKG--------LHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 278 LRGMPEMLLDPDEVSYSAVI 297
L M E + PD V YSA+I
Sbjct: 284 LSKMEETHIKPDVVIYSAII 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 7/180 (3%)
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+++I F + A+ + +M + I +++++ +LI+ C +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------TSFSPSLVTY 258
G P T++TL+ CL+ S+ L +++ GFL +P ++T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
N LI+GLC R EA ++ M L D V+Y +++G ++ + + A L +M++
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 17/214 (7%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA 78
RG A T ++N ++ C L A+ + ++M PD +T N L+ CE
Sbjct: 461 RGLVANTT-----TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
EK +EL+ + + ++ + Y +I C ++V+EA + + G+
Sbjct: 516 EKLEEA-------LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
P +Y+ +IS FC + A + +M D G PD Y LI+ + ++ +
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
L EM G S T +V G K F
Sbjct: 629 LISEMRSNGFSGDAFTI-KMVADLITDGRLDKSF 661
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 19/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G +V +N V+ LC L A V +K D VTYNTLI + +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR---- 234
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L M R++ PN + ++I F + EA + + M + + P+ +
Sbjct: 235 ---WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FC + +G A M M+ KG FPDV Y LI C +R+ + LF EM
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G+ TY+TL+ YC G+ + V QK F SP +VTYN L+
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLN--------VAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
LC + ++AL ++ + + +D D ++Y+ +I G R +L++A+ L + +K
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 20/309 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G V++N ++ L G+ +A +L M DP+ + + LI + E N
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK-EGN--- 269
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ LY +M R + PN TY S+I FC + +A + LM KG P +
Sbjct: 270 ---LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FCK+K + +++ EM +G+ D Y LI C +L A+ +F M+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+SP TY+ L++ C G+ K + ++ +QK + ++TYN +I G
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVED-LQK-------SEMDVDIITYNIIIQG 438
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
LC + EA + R + + PD ++Y +ISG R R+A +L M +++ P
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM-KEDGFMP 497
Query: 325 LDQDTNESL 333
++ +E+L
Sbjct: 498 SERIYDETL 506
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 43/240 (17%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P+ T S++ FC NR +EAV ++ M G P+ Y+ +I+ CKN+++ ALE+
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRR-------------------------------- 192
M KGI D Y LI L + R
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 193 ---LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
LLEAR+L++EM+ R + P TY++L+ +C+ G ++ D ++ KG
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF----- 321
Query: 250 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
P +VTYN LI G C +R ++ +++ M L D +Y+ +I G+ + +L A
Sbjct: 322 ---PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 48/241 (19%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+ ++N+++ C G L +A+ + + M PD VTYNTLI C++++ +
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG----- 343
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++L+ +M + L + TY ++I +C ++ A + M + G+SP +Y+ ++
Sbjct: 344 --MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 150 SRFCKNKEMGKAL---------EMKVEMLD--------------------------KGIF 174
C N ++ KAL EM V+++ KG+
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD-TLVEAYC-LKGEFSKVF 232
PD AY +I LC + EA L + M G P R YD TL + Y L E K
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAA 521
Query: 233 H 233
H
Sbjct: 522 H 522
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 18/292 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAAC-----EAEKNHNPSIPYV 89
++F++ VK G +R +LE+ +P+ + A+ E +N I +
Sbjct: 7 IAFSSSVK-----GFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFD 61
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
L+ +M P+ + ++ + N+ + + + M G+S S++ +I
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
FC+ + AL + +M+ G P + G L+ C R EA L M G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y+T++ C + + + + +KG VTYN LI GL
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG--------IRADAVTYNTLISGLSNSG 233
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
R +A +LR M + +DP+ + ++A+I F + L +A L EM ++
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 21/318 (6%)
Query: 6 RVSSTVATLKTFWNVPIRG--FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT-- 61
R+ S + LK + V G G L +FN V+ C ++ A ++L KM
Sbjct: 90 RLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKL 149
Query: 62 --DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
+PD VT +L+ C + + ++VE+ ++ P+ Y ++I C
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK-------PDIVAYNAIIDSLCK 202
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
RV +A + + KG+ P+ +Y+ +++ C + A + +M+ K I P+V
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
Y L+ ++LEA++LF+EM+ + P TY +L+ CL + + D ++
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
KG L +V+YN LI+G C +R ++ +++ R M + L + V+Y+ +I G
Sbjct: 323 SKGCL--------ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 300 FRRIRELRKAFELKLEMD 317
F + ++ KA E +MD
Sbjct: 375 FFQAGDVDKAQEFFSQMD 392
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 8/215 (3%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P+ T S++ FC RNRV +AV ++ M E G P +Y+ II CK K + A +
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
E+ KGI P+V Y L+ LC+ R +A L +M+ + ++P TY L++A+
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
G+ + L +E+++ S P +VTY++LI+GLC R DEA ++ M
Sbjct: 273 NGKVLEAKELFEEMVR--------MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 285 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D VSY+ +I+GF + + + +L EM Q+
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 23/298 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E V+ ++V C ++ +A ++++KM + PD V YN +I + C+ ++ ++
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + ++ + + PN TY +++ C+ +R +A +L M +K ++P+ +
Sbjct: 210 -------FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS ++ F KN ++ +A E+ EM+ I PD+ Y LI LC R+ EA +F M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G +Y+TL+ +C L E+ Q+G + + VTYN LI G
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS--------NTVTYNTLIQG 374
Query: 265 LCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
FFQ D+A E M + PD +Y+ ++ G EL KA + +M ++E
Sbjct: 375 --FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 19/276 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +V++ A+V LC + +A +L M P+ +TY+ L+ A + K
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK---- 275
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ EL+ +M + P+ TY S+I C +R++EA + LM KG S
Sbjct: 276 ---VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ FCK K + +++ EM +G+ + Y LIQ + +A++ F +M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+SP TY+ L+ C GE K + +++ ++ +VTY +I G
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR--------EMDLDIVTYTTVIRG 444
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+C + +EA + + L PD V+Y+ ++SG
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYV 89
+V++++++ LC ++ EA + + M C V+YNTLI C+A++ +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG----- 349
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++L+ +M R L N TY ++I+ F V++A M G+SP +Y+ ++
Sbjct: 350 --MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C N E+ KAL + +M + + D+ Y +I+ +C ++ EA LF + L+G+
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
P TY T++ C KG +V L ++ Q+G +
Sbjct: 468 PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
++ +A+ + M + P ++R++S K K+ + + +M GI D++ +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
++I C ++ A + +ML G P T +LV +C + S L D++++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
G+ P +V YNA+I LC +R ++A + + + + P+ V+Y+A+++G
Sbjct: 185 GY--------KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 302 RIRELRKAFELKLEMDQKE 320
A L +M +K+
Sbjct: 237 NSSRWSDAARLLSDMIKKK 255
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
++ ++ A+++ +M+ FP + + L+ + ++ L ++M + G+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
T++ ++ +C + S + ++++ G+ P VT +L++G C R +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGY--------EPDRVTIGSLVNGFCRRNRVSD 173
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
A+ ++ M E+ PD V+Y+A+I + + + AF+ E+++K
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 19/276 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G L SF ++ C +L A + L KM +P VT+ +L+ C + +
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+IV L ++ PN Y ++I C++ +V A+ +L+ M + G+ P +
Sbjct: 169 MSLVDQIVGLGYE-------PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVT 221
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+R + G + + +M+ GI PDV + LI + + +LLEA+ + EM+
Sbjct: 222 YNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMI 281
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R ++P TY++L+ C+ G + + + ++ KGF P+ VTYN LI+G
Sbjct: 282 QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF--------PNAVTYNTLING 333
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
C +R D+ ++IL M +D D +Y+ + G+
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 152/329 (46%), Gaps = 40/329 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA------ 78
G E +V +N ++ LC +G++ A VL+ M PD VTYN+LI +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 79 --------EKNHNPS-IPYVRIVELY-------------HQMCVRELSPNETTYRSMIRL 116
+P I + ++++Y ++M R ++PN TY S+I
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
C ++EA +L ++ KG P+A +Y+ +I+ +CK K + +++ M G+ D
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
Y L Q C + A + M+ G+ P T++ L++ C G+ K ++
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL-VRL 417
Query: 237 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
E +QK + ++TYN +I GLC + ++A + + + PD ++Y +
Sbjct: 418 EDLQK-------SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITM 470
Query: 297 ISGFRRIRELRKAFELKLEMDQKETCWPL 325
+ G RR R R+A EL +M +++ P+
Sbjct: 471 MIGLRRKRLWREAHELYRKMQKEDGLMPI 499
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 8/237 (3%)
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
SI + + L+ M P+ + ++ N+ E + + R + G+S S
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I FC+ + AL +M+ G P + +G L+ CH R EA L +++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G P Y+T++++ C KG+ + + + + G P +VTYN+LI
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG--------IRPDVVTYNSLITR 228
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
L + IL M M + PD +++SA+I + + +L +A + EM Q+
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ L ++C + YR +R + +A+ + MAE P +SR++
Sbjct: 28 VTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLI 87
Query: 151 RFCK-NK-EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
K NK E +L +EML GI D++++ LI C RL A +M+ G
Sbjct: 88 AIAKLNKYEAVISLFRHLEML--GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF 145
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P T+ +LV +C F + L D+++ G + P++V YN +I LC
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG--------YEPNVVIYNTIIDSLCEK 197
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+ + AL++L+ M +M + PD V+Y+++I+
Sbjct: 198 GQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 54/323 (16%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+ +++V+ L GK+ EA +++++ D P+ YN LI + C+ K H +
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL----- 388
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLS------------ 139
L+ +M L PN+ TY +I +FC R +++ A+ L M + GL
Sbjct: 389 --LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 140 -----------------------PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
P +Y+ ++ +C ++ KAL + EM KGI P
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
++ + L+ L + +A LF EM + P TY+ ++E YC +G+ SK F
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 237 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
E+ +KG + P +Y LIHGLC + EA + G+ + + +E+ Y+ +
Sbjct: 567 EMTEKGIV--------PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 297 ISGFRRIRELRKAFELKLEMDQK 319
+ GF R +L +A + EM Q+
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQR 641
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 147/324 (45%), Gaps = 38/324 (11%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
A G + +V +N ++ LC + K+ EA + + + PD VTY TL+ C+ ++
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE-- 312
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ +E+ +M SP+E S++ R ++EEA+ +++ + + G+SP+
Sbjct: 313 -----FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
Y+ +I CK ++ +A + M G+ P+ Y +LI + C + +L A E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------- 249
M+ G+ Y++L+ +C G+ S E+I K P VT
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 250 --------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
+PS+ T+ L+ GL +A+++ M E + P+ V+Y+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 296 VISGFRRIRELRKAFELKLEMDQK 319
+I G+ ++ KAFE EM +K
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEK 571
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 19/301 (6%)
Query: 20 VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAA 75
V + G E + + ++ C EGKL EA +V ++M D D V Y LI +
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 76 CEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
+ H + +++ H R L P++ Y SMI +EA GI LM
Sbjct: 658 LK----HKDRKLFFGLLKEMHD---RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
+G P+ +Y+ +I+ CK + +A + +M P+ YG + +L ++
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
+L+G+ TY+ L+ +C +G + L +I G SP
Sbjct: 771 KAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV--------SPDC 822
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
+TY +I+ LC +A+E+ M E + PD V+Y+ +I G E+ KA EL+ E
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 316 M 316
M
Sbjct: 883 M 883
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++ AV+ LC G + EAE + KM + P+ VTY + + E + +
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE------VDMQK 771
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
VEL H ++ L N TY +IR FC + R+EEA ++ M G+SP +Y+ +I+
Sbjct: 772 AVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
C+ ++ KA+E+ M +KGI PD AY LI C + +A +L EML +G+ P
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Query: 211 GGRTYDT 217
+T T
Sbjct: 891 NNKTSRT 897
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 116/292 (39%), Gaps = 50/292 (17%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD Y +I++ CE + R E+ M N Y +I C + +
Sbjct: 225 PDVYIYTGVIRSLCELKD-------LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML------------- 169
V EAVGI + +A K L P +Y ++ CK +E LEM EML
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 170 ----------------------DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
D G+ P++ Y LI LC R+ EA LF M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+ P TY L++ +C +G+ E++ G S+ YN+LI+G C
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG--------LKLSVYPYNSLINGHCK 449
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
F A + M L+P V+Y++++ G+ ++ KA L EM K
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 134/316 (42%), Gaps = 38/316 (12%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++N +++ C EG + +A L++MT+ PD +Y LI C + S V
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ---ASEAKVF 599
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ L+ C EL NE Y ++ FC ++EEA+ + + M ++G+ Y +I
Sbjct: 600 VDGLHKGNC--EL--NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
K+K+ + EM D+G+ PD Y +I EA ++ M+ G P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT--------------------- 249
TY ++ C G ++ L ++ +P VT
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 250 ------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
+ TYN LI G C R +EA E++ M + PD ++Y+ +I+ R
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 304 RELRKAFELKLEMDQK 319
+++KA EL M +K
Sbjct: 836 NDVKKAIELWNSMTEK 851
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+EL++ M + P+ Y +IR C+ + A ++ M G + Y+ +I
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDG 271
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
CK +++ +A+ +K ++ K + PDV Y L+ LC + ++ EML SP
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
+LVE +G+ + +L V+ G SP+L YNALI LC ++
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFG--------VSPNLFVYNALIDSLCKGRKF 383
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
EA + M ++ L P++V+YS +I F R +L A EM
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVR 90
V + +++ G +EA + + M + CV TY +I C+A + +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV---- 738
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
L +M PN+ TY + + + L KGL + +Y+ +I
Sbjct: 739 ---LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
FC+ + +A E+ M+ G+ PD Y +I LC + + +A +L+ M +G+ P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 250
Y+TL+ C+ GE K L++E++++G +P TS
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 9/201 (4%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK 171
+I+ + RV + V + ++M K L P + S ++ K + G A+E+ +M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 172 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
GI PDV+ Y +I+ LC + L A+++ M G Y+ L++ C K + +
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 232 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 291
++ ++ K P +VTY L++GLC Q + LE++ M + P E
Sbjct: 282 VGIKKDLAGK--------DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
Query: 292 SYSAVISGFRRIRELRKAFEL 312
+ S+++ G R+ ++ +A L
Sbjct: 334 AVSSLVEGLRKRGKIEEALNL 354
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 41/319 (12%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEK-------- 80
+ ++N +V C G + EA + K+ DPD TY +LI C+ +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 81 NHNP-------SIPYVRIV-------------ELYHQMCVRELSPNETTYRSMIRLFCDR 120
N P + Y ++ +L+ +M E P TY +I+ C
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
R EA+ +++ M E G+ P+ +Y+ +I C + KA E+ +ML+KG+ P+V Y
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
LI C + + +A D+ + M R +SP RTY+ L++ YC K K + +++++
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLE 455
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+ L P +VTYN+LI G C D A +L M + L PD+ +Y+++I
Sbjct: 456 RKVL--------PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 301 RRIRELRKAFELKLEMDQK 319
+ + + +A +L ++QK
Sbjct: 508 CKSKRVEEACDLFDSLEQK 526
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 19/268 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAV----LEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N ++ L G + E + V LE P+ TYN ++ C+ + +IV
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E L P+ TY S+I +C R ++ A + M KG + +Y+ +I
Sbjct: 246 E-------AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C + + +A+++ V+M D FP V Y +LI+ LC R EA +L +EM G+ P
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
TY L+++ C + +F K L ++++KG + P+++TYNALI+G C +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLM--------PNVITYNALINGYCKRGMIE 410
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGF 300
+A++++ M L P+ +Y+ +I G+
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGY 438
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 45/340 (13%)
Query: 31 EKGL----VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
EKGL +++NA++ C G + +A V+E M P+ TYN LIK C++ +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH- 444
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ + + ++M R++ P+ TY S+I C + A +L LM ++GL P
Sbjct: 445 -------KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +I CK+K + +A ++ + KG+ P+V Y LI C ++ EA + ++
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------- 249
ML + P T++ L+ C G+ + L++++++ G P T
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 250 --------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
P TY I C R +A +++ M E + PD +YS+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 296 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 335
+I G+ + + AF++ M + C P Q T SL+K
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRM-RDTGCEP-SQHTFLSLIK 715
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 10/245 (4%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
++Y +M ++ PN TY M+ +C VEEA + + E GL P +Y+ +I +
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ K++ A ++ EM KG + AY LI LC RR+ EA DLF +M P
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
RTY L+++ C S+ +L E+ + G P++ TY LI LC + +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGI--------KPNIHTYTVLIDSLCSQCKFE 375
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 332
+A E+L M E L P+ ++Y+A+I+G+ + + A ++ +E+ + P + NE
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV-VELMESRKLSPNTRTYNE- 433
Query: 333 LVKDF 337
L+K +
Sbjct: 434 LIKGY 438
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 39/320 (12%)
Query: 30 TEKGLV----SFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKN 81
++GLV ++ +++ LC ++ EA +++ +K +P+ V Y LI C+A K
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ + +M + PN T+ ++I C +++EA + M + GL P
Sbjct: 549 DEAHL-------MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+ + +I R K+ + A +ML G PD H Y IQ C + RLL+A D+
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS--------- 252
+M G+SP TY +L++ Y G+ + F + + G P T S
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 253 --------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
P L + ++ D +E+L M E + P+ SY +I G +
Sbjct: 722 YGKQKGSEPELCAMSNMMEF-------DTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 305 ELRKAFELKLEMDQKETCWP 324
LR A ++ M + E P
Sbjct: 775 NLRVAEKVFDHMQRNEGISP 794
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 19/216 (8%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
+Y S++ L + V V +RL+ K D+ + C+ + E+K ++
Sbjct: 125 SYASLLTLLINNGYVG-VVFKIRLLMIKSCDSVGDAL--YVLDLCRKMNKDERFELKYKL 181
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+ + Y L+ L + E + ++ EML + P TY+ +V YC G
Sbjct: 182 I-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
+ ++++ G P TY +LI G C + D A ++ MP
Sbjct: 235 EEANQYVSKIVEAG--------LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+EV+Y+ +I G R + +A +L ++M E C+P
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE-CFP 321
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 128/301 (42%), Gaps = 38/301 (12%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNH 82
++GT+ ++ ++ C EG+L +AE ++ KM PD TY++LIK + + +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
++ +M P++ T+ S+I+ + ++ +KG P
Sbjct: 690 -------FAFDVLKRMRDTGCEPSQHTFLSLIKHLLE----------MKYGKQKGSEPEL 732
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+ S ++ E +E+ +M++ + P+ +Y LI +C L A +F
Sbjct: 733 CAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 203 MLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 261
M G+SP ++ L+ C + ++ + D++I G L P L + L
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL--------PQLESCKVL 837
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
I GL + + + + + DE+++ +I G + + L +AF + +K
Sbjct: 838 ICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK-QGLVEAFYELFNVMEKNG 896
Query: 322 C 322
C
Sbjct: 897 C 897
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 19/294 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNP 84
G +V++++++ LC G+ +A +L EK +P+ VT+N LI A + K
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK---- 345
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+V +LY M R + P+ TY S++ FC +R+++A + M K P +
Sbjct: 346 ---FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I FCK+K + E+ EM +G+ D Y LIQ L H A+ +F++M+
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY L++ C G+ K + D +QK + + Y +I G
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQK-------SEIKLDIYIYTTMIEG 514
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+C + D+ ++ + + P+ V+Y+ +ISG R L++A+ L +M +
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 153/347 (44%), Gaps = 40/347 (11%)
Query: 6 RVSSTVATLKTFWNVPIRGFTAAGTE--KGLVSFNAVVKRLCGEGKLREAEAVLEKMT-- 61
++ S +A +K F V G E GL ++N ++ C ++ A A+L KM
Sbjct: 90 KLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 62 --DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
+P VT ++L+ C ++ + V L QM P+ T+ ++I
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDA-------VALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
N+ EAV ++ M ++G P+ +Y +++ CK + AL + +M I DV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
+ +I LC R + +A +LF+EM +G+ P TY +L+ C G +S L ++I
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 240 QKGFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPD 272
+K P VT S P + TYN+L++G C R D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+A ++ M PD V+Y+ +I GF + + + EL EM +
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 19/296 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ VV LC G A +L KM + D V +NT+I + C+ +
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ +M + + PN TY S+I C R +A +L M EK ++P+ +
Sbjct: 280 -------LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I F K + +A ++ +M+ + I PD+ Y L+ C RL +A+ +F+ M+
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P TY+TL++ +C L E+ +G + VTY LI G
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV--------GDTVTYTTLIQG 444
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
L D A ++ + M + PD ++YS ++ G +L KA E+ M + E
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 21/291 (7%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
AA E +V FN ++ LC + +A + ++M P+ VTY++LI C +
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ S +L M ++++PN T+ ++I F + EA + M ++ + P
Sbjct: 313 DAS-------QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +++ FC + + KA +M M+ K FPDV Y LI+ C +R+ + +LF+E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-EVIQKGFLPYYVTSFSPSLVTYNAL 261
M RG+ TY TL++ +FH D + QK F P ++TY+ L
Sbjct: 426 MSHRGLVGDTVTYTTLIQG---------LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+ GLC + ++ALE+ M + + D Y+ +I G + ++ ++L
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 19/233 (8%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYV 89
+ ++N++V C +L +A+ + E M DC VTYNTLIK C++++ + +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT---- 420
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
EL+ +M R L + TY ++I+ + A + + M G+ P +YS ++
Sbjct: 421 ---ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C N ++ KALE+ M I D++ Y +I+ +C ++ + DLF + L+G+
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
P TY+T++ C K + + L ++ + G L P+ TYN LI
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL--------PNSGTYNTLI 582
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 27/246 (10%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
R S YR ++R ++++A+G+ M + P +++++S K K+
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
+ + +M I ++ Y +LI C + ++ A L +M+ G P T +L+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFSP 253
YC S L D++++ G+ P +T P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 313
+LVTY +++GLC D AL +L M ++ D V ++ +I + R + A L
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 314 LEMDQK 319
EM+ K
Sbjct: 284 KEMETK 289
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNP 84
G +++++ ++ LC GKL +A V + M D Y T+I+ C+A K +
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+L+ + ++ + PN TY +MI C + ++EA +L+ M E G P++ +
Sbjct: 525 W-------DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I ++ + + E+ EM D GL+ +L H RL ++ F +ML
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS---FLDML 633
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 31/322 (9%)
Query: 1 MKLLLRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM 60
M L ++ A F+ +P + +V FN ++ G+L +A+AVL M
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIP---------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 61 TD-----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
PD TYN+LI + +E+ H M + PN +Y ++
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGL-------VGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
FC +++EA +L M+ GL P+ ++ +IS FCK + +A+E+ EM KG P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
DV+ + LI LC + A L ++M+ G+ TY+TL+ A+ +GE + L
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 236 DEVIQKGFLPYYVTSFSP-SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
+E++ +G SP +TYN+LI GLC D+A + M P +S +
Sbjct: 553 NEMVFQG---------SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 295 AVISGFRRIRELRKAFELKLEM 316
+I+G R + +A E + EM
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEM 625
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 143/274 (52%), Gaps = 19/274 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + + S+ +V C GK+ EA VL +M+ P+ V +N LI A C+ +
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR---- 474
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
IP VE++ +M + P+ T+ S+I C+ + ++ A+ +LR M +G+ + +
Sbjct: 475 -IP--EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ F + E+ +A ++ EM+ +G D Y LI+ LC + +AR LF++ML
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G +P + + L+ C G + Q E++ +G +P +VT+N+LI+G
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG--------STPDIVTFNSLING 643
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
LC R ++ L + R + + PD V+++ ++S
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 30/251 (11%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+++ M R++ P T+ +++ FC N ++ A+ +LR M + G P++ Y +I
Sbjct: 203 NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
K + +AL++ EM G PD + +I LC R+ EA + ML+RG +P
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 213 RTYDTLVEAYCLKGE------------------FSKVFH-------LQDEVIQKGFLPYY 247
TY L+ C G F+ + H L D K L
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD---AKAVLSDM 379
Query: 248 VTSFS--PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 305
VTS+ P + TYN+LI+G ALE+L M P+ SY+ ++ GF ++ +
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 306 LRKAFELKLEM 316
+ +A+ + EM
Sbjct: 440 IDEAYNVLNEM 450
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 144/335 (42%), Gaps = 53/335 (15%)
Query: 36 SFNAVVKRLCGEGKLREAEAV----LEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
S+N V++ L + A V L + P T+ ++KA C A + ++ +R
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC-AVNEIDSALSLLR- 241
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++ CV PN Y+++I NRV EA+ +L M G P A++++ +I
Sbjct: 242 -DMTKHGCV----PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM-------- 203
CK + +A +M ML +G PD YG L+ LC R+ A+DLF +
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIF 356
Query: 204 --LLRGMSPGGR----------------------TYDTLVEAYCLKGEFSKVFHLQDEVI 239
L+ G GR TY++L+ Y +G + ++
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
KG P++ +Y L+ G C + DEA +L M L P+ V ++ +IS
Sbjct: 417 NKGC--------KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 300 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 334
F + + +A E+ EM +K C P D T SL+
Sbjct: 469 FCKEHRIPEAVEIFREMPRK-GCKP-DVYTFNSLI 501
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 32/256 (12%)
Query: 26 TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKN 81
+A G + V FN ++ C E ++ EA + +M PD T+N+LI CE ++
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 82 HNP---------------SIPYVRIV-------------ELYHQMCVRELSPNETTYRSM 113
+ ++ Y ++ +L ++M + +E TY S+
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
I+ C V++A + M G +P S + +I+ C++ + +A+E + EM+ +G
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
PD+ + LI LC R+ + +F+++ G+ P T++TL+ C G
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 234 LQDEVIQKGFLPYYVT 249
L DE I+ GF+P + T
Sbjct: 691 LLDEGIEDGFVPNHRT 706
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE 77
+R + G V++N ++ G+++EA ++ +M + D +TYN+LIK C
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
A + + L+ +M +P+ + +I C VEEAV + M +G
Sbjct: 577 AGEVD-------KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+P +++ +I+ C+ + L M ++ +GI PD + L+ LC + +A
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEA 221
L E + G P RT+ L+++
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQS 713
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+++N+++K LC G++ +A ++ EKM P ++ N LI C +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA------ 618
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
VE +M +R +P+ T+ S+I C R+E+ + + R + +G+ P +++ ++S
Sbjct: 619 -VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
CK + A + E ++ G P+ + +L+Q + Q L
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Query: 140 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 199
P SY+ ++ A + +ML + I P + +G++++ C + A L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 259
++M G P Y TL+ + ++ L +E+ G + P T+N
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV--------PDAETFN 291
Query: 260 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+I GLC F R +EA +++ M PD+++Y +++G +I + A +L + +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP 351
Query: 320 E 320
E
Sbjct: 352 E 352
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 28/316 (8%)
Query: 20 VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAE 79
V R A G G++ + +V LC G AE + K+ I ++
Sbjct: 181 VTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK---------IGFVLDSH 231
Query: 80 KNHNPSIPYVRIVELYHQMCVREL-------SPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+ + + R + L + V ++ +PN +Y +I C+ R+EEA G+
Sbjct: 232 IGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQ 291
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M EKG P +Y+ +I C + KA + EM+ +G P+VH Y +LI LC +
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
+ EA + ++M+ + P TY+ L+ YC G F L V++K +
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL-TVMEK-------RACK 403
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
P++ T+N L+ GLC +P +A+ +L+ M + L PD VSY+ +I G R + A++L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 313 KLEMDQKETCWPLDQD 328
M+ C+ ++ D
Sbjct: 464 LSSMN----CFDIEPD 475
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 20/257 (7%)
Query: 49 KLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
LR+A V + M+ P+ V+Y+ LI CE + L QM +
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEA-------FGLKDQMGEKGC 297
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
P+ TY +I+ CDR +++A + M +G P+ +Y+ +I C++ ++ +A
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ +M+ IFP V Y LI C R++ A +L M R P RT++ L+E C
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
G+ K HL ++ G SP +V+YN LI GLC + A ++L M
Sbjct: 418 RVGKPYKAVHLLKRMLDNG--------LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 284 MLLDPDEVSYSAVISGF 300
++PD ++++A+I+ F
Sbjct: 470 FDIEPDCLTFTAIINAF 486
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 147/306 (48%), Gaps = 21/306 (6%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN +++ LC GK +A +L++M D PD V+YN LI C E + N +
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR-EGHMNTA------ 460
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+L M ++ P+ T+ ++I FC + + + A L LM KG+S + + +I
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
CK + AL + ++ I H+ +++ +L ++ E + ++ G+ P
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY TLV+ G+ + F + + + G LP ++ Y +I+GLC F R
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP--------NVYPYTIIINGLCQFGRV 632
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 331
+EA ++L M + + P+ V+Y+ ++ G+ +L +A E M ++ + L+
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG--YELNDRIYS 690
Query: 332 SLVKDF 337
SL++ F
Sbjct: 691 SLLQGF 696
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 145/367 (39%), Gaps = 96/367 (26%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACE---AEKNHNPSIP 87
VS++ ++ LC G+L EA + ++M + C TY LIKA C+ +K N
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN---- 322
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
L+ +M R PN TY +I C ++EEA G+ R M + + P +Y+
Sbjct: 323 ------LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 148 IISRFCKNKEMGKALEMKV-----------------------------------EMLDKG 172
+I+ +CK+ + A E+ MLD G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
+ PD+ +Y +LI LC + + A L M + P T+ ++ A+C +G+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 233 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM-------- 284
+++KG S VT LI G+C + +AL IL + +M
Sbjct: 497 AFLGLMLRKG--------ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 285 ---LLD------------------------PDEVSYSAVISGFRRIRELRKAFELKLEMD 317
+LD P V+Y+ ++ G R ++ +F + LE+
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI-LELM 607
Query: 318 QKETCWP 324
+ C P
Sbjct: 608 KLSGCLP 614
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 46/254 (18%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G +VS+N ++ LC EG + A +L M +PDC+T+ +I A C+ K
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK-------- 136
S M + +S +E T ++I C + +A+ IL + +
Sbjct: 496 S-------AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 137 ---------------------------GLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
GL P +Y+ ++ ++ ++ + + M
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
G P+V+ Y ++I LC R+ EA L M G+SP TY +V+ Y G+
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 230 KVFHLQDEVIQKGF 243
+ ++++G+
Sbjct: 669 RALETVRAMVERGY 682
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 30/241 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVT----YNTLIKAACEAEKNHNP 84
G +V++ +V L G + + +LE M C+ Y +I C+ +
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+L M +SPN TY M++ + + +++ A+ +R M E+G +
Sbjct: 636 E-------KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688
Query: 145 YSRIISRFC------KNKEMGKALEMKVEMLD----KGIFPDVHAYG--------LLIQL 186
YS ++ F N E ++ + D + V G L+
Sbjct: 689 YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR 748
Query: 187 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 246
LC + R E+ DL Q +L RG+ + D ++E+YC K + +K L V++ GF+P
Sbjct: 749 LCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPS 807
Query: 247 Y 247
+
Sbjct: 808 F 808
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 19/285 (6%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
S N ++ R GK + + + M P TYN +I C+ + R
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK-----EGDVEAAR- 282
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
L+ +M R L P+ TY SMI F R+++ V M + P +Y+ +I+
Sbjct: 283 -GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FCK ++ LE EM G+ P+V +Y L+ C + + +A + +M G+ P
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY +L++A C G S F L +E++Q G ++VTY ALI GLC +R
Sbjct: 402 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVG--------VEWNVVTYTALIDGLCDAERM 453
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
EA E+ M + P+ SY+A+I GF + + + +A EL E+
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 136/305 (44%), Gaps = 22/305 (7%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACE 77
+ AG + ++N ++ +C EG + A + E+M PD VTYN++I +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ + V E MC P+ TY ++I FC ++ + R M G
Sbjct: 310 VGRLDDT----VCFFEEMKDMCCE---PDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
L P+ SYS ++ FCK M +A++ V+M G+ P+ + Y LI C L +A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
L EML G+ TY L++ C + L ++ G + P+L +
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI--------PNLAS 474
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
YNALIHG + D ALE+L + + PD + Y I G + ++ A K+ M+
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA---KVVMN 531
Query: 318 QKETC 322
+ + C
Sbjct: 532 EMKEC 536
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 130/288 (45%), Gaps = 19/288 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++N+++ G+L + E+M D PD +TYN LI C+ K +P
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK-----LPIG- 351
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+E Y +M L PN +Y +++ FC +++A+ M GL P+ +Y+ +I
Sbjct: 352 -LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
CK + A + EML G+ +V Y LI LC R+ EA +LF +M G+ P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
+Y+ L+ + + L +E+ +G P L+ Y I GLC ++
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRG--------IKPDLLLYGTFIWGLCSLEK 522
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+ A ++ M E + + + Y+ ++ + + + L EM +
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 25/313 (7%)
Query: 17 FWNVPI-----RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVT 67
F +PI R G + +VS++ +V C EG +++A M P+ T
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 68 YNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAV 127
Y +LI A C K N S + L ++M + N TY ++I CD R++EA
Sbjct: 405 YTSLIDANC---KIGNLSDAF----RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 128 GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 187
+ M G+ P+ SY+ +I F K K M +ALE+ E+ +GI PD+ YG I L
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 188 CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY 247
C ++ A+ + EM G+ Y TL++AY G ++ HL DE+ +
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE------- 570
Query: 248 VTSFSPSLVTYNALIHGLCFFQRPDEALEIL-RGMPEMLLDPDEVSYSAVISGFRRIREL 306
++VT+ LI GLC + +A++ R + L + ++A+I G + ++
Sbjct: 571 -LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 307 RKAFELKLEMDQK 319
A L +M QK
Sbjct: 630 EAATTLFEQMVQK 642
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P + ++ + D +EEA+ M + P S + ++ RF K +GK ++
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAK---LGKTDDV 246
Query: 165 K---VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
K +M+ G P V Y ++I +C + + AR LF+EM RG+ P TY+++++
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
F KV L D V F P ++TYNALI+ C F + LE R M
Sbjct: 307 ------FGKVGRLDDTVCF--FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 282 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
L P+ VSYS ++ F + +++A + ++M
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 48 GKLREAEAVLEKMTDPD----CVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
G E +L++M + D VT+ LI C+ + + RI + L
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG------L 609
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
N + +MI C N+VE A + M +KGL P +Y+ ++ K + +AL
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
++ +M + G+ D+ AY L+ L H +L +AR +EM+ G+ P
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + L+ + + LC K+ A+ V+ +M + + + Y TL+ A K+ NP
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF---KSGNP 558
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGIL-RLMAEKGLSPHAD 143
+ + L +M ++ T+ +I C V +AV R+ + GL +A
Sbjct: 559 T----EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
++ +I CK+ ++ A + +M+ KG+ PD AY L+ Q +LEA L +M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
GM Y +LV + K +E+I +G P V S
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 35/316 (11%)
Query: 18 WNVPIRGF----------------TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT 61
+N IRGF +G LV++ ++ C GK+ EA L++M
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 62 ----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
+ D V Y +LI+ C+ + R L+ ++ R SP TY ++IR F
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGE-------LDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
C +++EA I M E+G+ P+ +Y+ +I C + +AL++ M++K P+
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
Y ++I LC + +A ++ + M R P TY+ L+ C KG+ DE
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL-------DE 405
Query: 238 VIQKGFLPYYVTSFS-PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
+ +L +S++ P +++YNALIHGLC R +AL+I + E L D V+ + +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 297 ISGFRRIRELRKAFEL 312
++ + ++ KA EL
Sbjct: 466 LNSTLKAGDVNKAMEL 481
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 98 MCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 157
M R + N + +++ C +AV +LR M L P SY+ +I FC+ KE
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 158 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 217
+ KALE+ EM G + +G+LI C ++ EA +EM G+ Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 218 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 277
L+ +C GE + L DEV+++G SP +TYN LI G C + EA EI
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERG--------DSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 278 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
M E + P+ +Y+ +I G + + ++A +L M +K+
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 15/255 (5%)
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEA 126
+N L+K C ++ + V L +M L P+ +Y ++IR FC+ +E+A
Sbjct: 144 NHNILLKGLCR-------NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
+ + M G S ++ +I FCK +M +A+ EM G+ D+ Y LI+
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 187 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 246
C L + LF E+L RG SP TY+TL+ +C G+ + + + +I++G
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG---- 312
Query: 247 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
P++ TY LI GLC + EAL++L M E +P+ V+Y+ +I+ + +
Sbjct: 313 ----VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 307 RKAFELKLEMDQKET 321
A E+ M ++ T
Sbjct: 369 ADAVEIVELMKKRRT 383
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 155/360 (43%), Gaps = 79/360 (21%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEA----VLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G E LV + ++++ C G+L +A VLE+ P +TYNTLI+ C+ +
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
S E++ M R + PN TY +I C + +EA+ +L LM EK P+A +
Sbjct: 302 S-------EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDK---------------GIF--------------- 174
Y+ II++ CK+ + A+E+ VE++ K G+
Sbjct: 355 YNIIINKLCKDGLVADAVEI-VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 175 --------PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR-TYDTLVEAYCLK 225
PDV +Y LI LC + RL +A D++ ++L+ + G R T + L+ +
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIY-DLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 226 GEFSKVFHLQDEV--------------------------IQKGFL-PYYVTSFSPSLVTY 258
G+ +K L ++ + KG L V+ PS+ Y
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
N L+ LC D+A + M PD VS++ +I G + +++ A L + M +
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 34/245 (13%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM------TDPDCVTYNTLIKAACEAEKNHNPSIPY 88
+++N ++ LC +G L EA +L M TDPD ++YN LI C+ + H Y
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 89 VRIVE----------------------------LYHQMCVRELSPNETTYRSMIRLFCDR 120
+VE L+ Q+ ++ N TY +MI FC
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+ A G+L M L P Y+ ++S CK + +A + EM FPDV ++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
++I + A L M G+SP TY L+ + G + D+++
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 241 KGFLP 245
GF P
Sbjct: 628 SGFEP 632
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 146/346 (42%), Gaps = 45/346 (13%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAAC-EAEKNHNPS 85
E V++N ++ +LC +G + +A ++E M T PD +TYN L+ C + + +
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 86 IPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
+ Y+ + + + P+ +Y ++I C NR+ +A+ I L+ EK + +
Sbjct: 409 LLYLMLKDSSYT------DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+ +++ K ++ KA+E+ ++ D I + Y +I C L A+ L +M +
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------- 249
+ P Y+ L+ + C +G + + L +E+ + P V+
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 250 -----------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE------VS 292
SP L TY+ LI+ DEA+ M + +PD +
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 293 YSAVISGFRRIREL-RKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
Y ++ EL +K + + +D++ TC +D N S D
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDL 688
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 18/173 (10%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N ++ LC EG L +A + E+M PD V++N +I + +A +
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE------- 584
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
L M LSP+ TY +I F ++EA+ M + G P A ++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ-------RRLLEARD 198
E K E+ +++DK I D ++ +C+ +RLL D
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTD 697
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 216 DTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-SFSPSLVTYNALIHGLCFFQRPDEA 274
DT + L G ++ G L + F+ ++ +N L+ GLC +A
Sbjct: 102 DTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKA 161
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 325
+ +LR M L PD SY+ VI GF +EL KA EL EM W L
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSL 212
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEA--------- 78
G +V+F ++ LC EG++ +A A++++M + Y T+I C+
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNL 63
Query: 79 ----EKNHNPS--IPYVRIVE-------------LYHQMCVRELSPNETTYRSMIRLFCD 119
E+ H + + Y I++ L+ +M + + P+ TY MI FC
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
R +A +LR M E+ ++P ++S +I+ K ++ +A E+ +ML +GIFP
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
Y +I C Q RL +A+ + M + SP T+ TL+ YC + E+
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
++G + + VTY LIHG C D A ++L M + P+ +++ ++++
Sbjct: 244 RRGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 300 FRRIRELRKAFELKLEMDQKE 320
+ELRKAF + ++ + E
Sbjct: 296 LCSKKELRKAFAILEDLQKSE 316
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 31/309 (10%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELY 95
SF +V RL K + AE ++ +M +CV ++ + C + +R+ +
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRV---F 109
Query: 96 HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 155
H+M + P++ Y +++ + + N++ A + M E GL P S + +I C+N
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 156 K-EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
+ L++ +EM +G PD + YG LI LC R+ EA+ LF EM+ + +P T
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS---------------------- 252
Y +L+ C + +E+ KG P T S
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 253 -----PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELR 307
P++VTY LI GLC Q+ EA+E+L M L PD Y VISGF I + R
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 308 KAFELKLEM 316
+A EM
Sbjct: 350 EAANFLDEM 358
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 142/304 (46%), Gaps = 21/304 (6%)
Query: 29 GTEKGLVSFNAVVKRLC-GEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHN 83
G + S N ++K LC +G + + +M DPD TY TLI C
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR------ 204
Query: 84 PSIPYVRIVE---LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
+ RI E L+ +M ++ +P TY S+I C V+EA+ L M KG+ P
Sbjct: 205 ----FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
+ +YS ++ CK+ +A+E+ M+ +G P++ Y LI LC ++++ EA +L
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL 320
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 260
M L+G+ P Y ++ +C +F + + DE+I G P +T ++ + T N
Sbjct: 321 DRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT-WNIHVKTSNE 379
Query: 261 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
++ GLC P A + M + + + +++ + E +KA +L E+ +
Sbjct: 380 VVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI-VTD 437
Query: 321 TCWP 324
C P
Sbjct: 438 GCIP 441
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 116/294 (39%), Gaps = 81/294 (27%)
Query: 1 MKLLLRVSSTV-ATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEK 59
+K L R TV A LK F +P RG + ++ ++ LC G++ EA+ + +
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRG-----CDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 60 MTDPDC----VTYNTLIKAACEAEKNHNPSIPYV-------------------------- 89
M + DC VTY +LI C KN + ++ Y+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLC-GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
Query: 90 ---RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
+ +EL+ M R PN TY ++I C +++EAV +L M +GL P A Y
Sbjct: 277 RSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPD-----VH------------------AYGL- 182
++IS FC + +A EM+ GI P+ +H A+ L
Sbjct: 337 KVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLY 396
Query: 183 -----------------LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
L++ LC + +A L E++ G P T+ L+
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
P AY ++ +L + +L A ++ M G+ P + + L++A C
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCR---------- 168
Query: 235 QDEVIQKG---FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 291
D + G FL P TY LI GLC F R DEA ++ M E P V
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 292 SYSAVISGFRRIRELRKAFELKLEMDQK 319
+Y+++I+G + + +A EM K
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSK 256
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 136/269 (50%), Gaps = 20/269 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN +++ LCG GK +A +L M+ +PD VTYNTLI+ C++ + + S
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKAS------ 261
Query: 92 VELYHQMCVREL-SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
E++ + + SP+ TY SMI +C ++ EA +L M G+ P +++ ++
Sbjct: 262 -EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+ K EM A E++ +M+ G FPDV + LI C ++ + L++EM RGM P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY L+ A C + K L ++ K +P P + YN +I G C +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIP------QPFM--YNPVIDGFCKAGK 432
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISG 299
+EA I+ M + PD+++++ +I G
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 17/262 (6%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D T+N LI+ C K + +EL M P+ TY ++I+ FC N +
Sbjct: 205 DTKTFNILIRGLCGVGKAE-------KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNEL 257
Query: 124 EEAVGILRLMAEKGL-SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+A + + + + SP +Y+ +IS +CK +M +A + +ML GI+P + +
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L+ +L A ++ +M+ G P T+ +L++ YC G+ S+ F L +E+ +G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
P + TY+ LI+ LC R +A E+L + + P Y+ VI GF +
Sbjct: 378 MFP--------NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 303 IRELRKAFELKLEMDQKETCWP 324
++ +A + EM++K+ C P
Sbjct: 430 AGKVNEANVIVEEMEKKK-CKP 450
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V+FN +V G++ AE + KM PD VT+ +LI C + +
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ-------VSQ 365
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
L+ +M R + PN TY +I C+ NR+ +A +L +A K + P Y+ +I
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
FCK ++ +A + EM K PD + +LI C + R+ EA +F +M+ G SP
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
T +L+ G + +HL +++ +KG
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V++ +++ C GK+REA ++L+ M P VT+N L+ +A + +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE-------ML 329
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E+ +M P+ T+ S+I +C +V + + M +G+ P+A +YS +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ C + KA E+ ++ K I P Y +I C ++ EA + +EM +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
P T+ L+ +C+KG + + +++ G P +T
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 28/276 (10%)
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQM--CVRE--LSPNETTYRSMIRLFCDRNR 122
TYN L ++ C+A + +L QM C++ +SPN ++ F ++ +
Sbjct: 105 TYNLLTRSLCKAG-----------LHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153
Query: 123 VEEAVGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
+ A +L E +G +S +++ K + A+++ E L D +
Sbjct: 154 LHFATALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+LI+ LC + +A +L M G P TY+TL++ +C E +K + +V +
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KS 269
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
G + SP +VTY ++I G C + EA +L M + + P V+++ ++ G+
Sbjct: 270 G------SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 302 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
+ E+ A E++ +M C+P D T SL+ +
Sbjct: 324 KAGEMLTAEEIRGKMIS-FGCFP-DVVTFTSLIDGY 357
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 136/269 (50%), Gaps = 20/269 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN +++ LCG GK +A +L M+ +PD VTYNTLI+ C++ + + S
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKAS------ 261
Query: 92 VELYHQMCVREL-SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
E++ + + SP+ TY SMI +C ++ EA +L M G+ P +++ ++
Sbjct: 262 -EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+ K EM A E++ +M+ G FPDV + LI C ++ + L++EM RGM P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY L+ A C + K L ++ K +P P + YN +I G C +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIP------QPFM--YNPVIDGFCKAGK 432
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISG 299
+EA I+ M + PD+++++ +I G
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 17/262 (6%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D T+N LI+ C K + +EL M P+ TY ++I+ FC N +
Sbjct: 205 DTKTFNILIRGLCGVGKAE-------KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNEL 257
Query: 124 EEAVGILRLMAEKGL-SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+A + + + + SP +Y+ +IS +CK +M +A + +ML GI+P + +
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L+ +L A ++ +M+ G P T+ +L++ YC G+ S+ F L +E+ +G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
P + TY+ LI+ LC R +A E+L + + P Y+ VI GF +
Sbjct: 378 MFP--------NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 303 IRELRKAFELKLEMDQKETCWP 324
++ +A + EM++K+ C P
Sbjct: 430 AGKVNEANVIVEEMEKKK-CKP 450
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V+FN +V G++ AE + KM PD VT+ +LI C + +
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ-------VSQ 365
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
L+ +M R + PN TY +I C+ NR+ +A +L +A K + P Y+ +I
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
FCK ++ +A + EM K PD + +LI C + R+ EA +F +M+ G SP
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
T +L+ G + +HL +++ +KG
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V++ +++ C GK+REA ++L+ M P VT+N L+ +A + +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE-------ML 329
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E+ +M P+ T+ S+I +C +V + + M +G+ P+A +YS +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ C + KA E+ ++ K I P Y +I C ++ EA + +EM +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
P T+ L+ +C+KG + + +++ G P +T
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 28/276 (10%)
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQM--CVRE--LSPNETTYRSMIRLFCDRNR 122
TYN L ++ C+A + +L QM C++ +SPN ++ F ++ +
Sbjct: 105 TYNLLTRSLCKAG-----------LHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153
Query: 123 VEEAVGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
+ A +L E +G +S +++ K + A+++ E L D +
Sbjct: 154 LHFATALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+LI+ LC + +A +L M G P TY+TL++ +C E +K + +V +
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KS 269
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
G + SP +VTY ++I G C + EA +L M + + P V+++ ++ G+
Sbjct: 270 G------SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 302 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
+ E+ A E++ +M C+P D T SL+ +
Sbjct: 324 KAGEMLTAEEIRGKMIS-FGCFP-DVVTFTSLIDGY 357
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 40/324 (12%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEA----- 78
+G E +V +N ++ LC G+L A +L +M D VTYNTL+ C +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 79 ---------EKNHNPS-IPYVRIV-------------ELYHQMCVRELSPNETTYRSMIR 115
+++ NP + + ++ ELY +M + PN TY S+I
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
C R+ +A LMA KG P+ +Y+ +IS FCK + + + +++ M +G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
D+ Y LI C +L A D+F M+ R ++P T+ L+ C+ GE
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
D++ + Y+ +V YN +IHGLC + ++A E+ +P + PD +Y+
Sbjct: 410 DDMRES---EKYI-----GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 296 VISGFRRIRELRKAFELKLEMDQK 319
+I G + R+A EL M ++
Sbjct: 462 MILGLCKNGPRREADELIRRMKEE 485
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P+ T+ S++ FC NR+ +A ++ LM + G P+ Y+ +I CKN E+ ALE+
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
EM KG+ DV Y L+ LC+ R +A + ++M+ R ++P T+ L++ +
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
+G + L E+IQ +S P+ VTYN++I+GLC R +A + M
Sbjct: 259 QGNLDEAQELYKEMIQ--------SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 285 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 328
P+ V+Y+ +ISGF + R + + +L Q+ +C + D
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLF----QRMSCEGFNAD 350
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 19/276 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G E +V+F +++ C ++ +A +++ M +P+ V YNTLI C KN
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC---KNGEL 192
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+I +EL ++M + L + TY +++ C R +A +LR M ++ ++P +
Sbjct: 193 NIA----LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I F K + +A E+ EM+ + P+ Y +I LC RL +A+ F M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G P TY+TL+ +C F + DE + K F F+ + TYN LIHG
Sbjct: 309 SKGCFPNVVTYNTLISGFC-------KFRMVDEGM-KLFQRMSCEGFNADIFTYNTLIHG 360
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
C + AL+I M + PD +++ ++ G
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 23/278 (8%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P V + L+ A + Y ++ +M + +S + ++ +I FC +R
Sbjct: 69 PSIVDFTRLLTATANLRR-------YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSR 121
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ +L M + G P ++ ++ FC +G A + + M+ G P+V Y
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT 181
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
LI LC L A +L EM +G+ TY+TL+ C G +S + +++++
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR- 240
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF-- 300
S +P +VT+ ALI DEA E+ + M + +DP+ V+Y+++I+G
Sbjct: 241 -------SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 301 -RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
R+ + +K F+L + C+P + T +L+ F
Sbjct: 294 HGRLYDAKKTFDLM----ASKGCFP-NVVTYNTLISGF 326
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 8/237 (3%)
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
SI + L+ +M + P+ + ++ + R E + + M G+S S
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +I FC+ + AL + +M+ G P + +G L+ C R+ +A L M+
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G P Y+TL++ C GE + L +E+ +KG +VTYN L+ G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG--------LGADVVTYNTLLTG 220
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
LC+ R +A +LR M + ++PD V+++A+I F + L +A EL EM Q
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+D ++ + F + A + EM+ P + + L+ + RR Q
Sbjct: 36 SDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQ 95
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 261
+M L G+S ++ L+ +C S + ++++ G + PS+VT+ +L
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG--------YEPSIVTFGSL 147
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+HG C R +A ++ M + +P+ V Y+ +I G + EL A EL EM++K
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 133/313 (42%), Gaps = 39/313 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G L +++ + C +L A A+L KM P VT N+L+ C +
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR---- 160
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V L QM P+ T+ +++ N+ EAV ++ M KG P +
Sbjct: 161 ---ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y +I+ CK E AL + +M I DV Y +I LC + + +A DLF +M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG------FLPYYVTSFS------ 252
+G+ P TY+ L+ C G +S L ++++K F + +F
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 253 ----------------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
P +V YN LI G C ++R +E +E+ R M + L + V+Y+ +
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 297 ISGFRRIRELRKA 309
I GF + R+ A
Sbjct: 398 IHGFFQARDCDNA 410
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 22/290 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + LV++ AV+ LC G+ A +L KM + D V YNT+I C+ + +
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+L+++M + + P+ TY +I C+ R +A +L M EK ++P
Sbjct: 270 -------FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 145 YSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
++ +I F K ++ +A ++ EM+ K FPDV AY LI+ C +R+ E ++F+EM
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-EVIQKGFLPYYVTSFSPSLVTYNALI 262
RG+ TY TL+ + F +D + Q F P ++TYN L+
Sbjct: 383 SQRGLVGNTVTYTTLIHGF---------FQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
GLC + AL + M + + D V+Y+ +I + ++ ++L
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 22/306 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAE----AVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G + + ++N ++ LC G+ +A +LEK +PD V +N LI A + K
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK---- 335
Query: 85 SIPYVRIVELYHQMC-VRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
V +LY +M + P+ Y ++I+ FC RVEE + + R M+++GL +
Sbjct: 336 ---LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ +I F + ++ A + +M+ G+ PD+ Y +L+ LC+ + A +F+ M
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
R M TY T++EA C G+ + L F + P++VTY ++
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDL--------FCSLSLKGVKPNVVTYTTMMS 504
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 323
G C +EA + M E P+ +Y+ +I R+R+ +A +L + + +
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA--RLRDGDEAASAELIKEMRSCGF 562
Query: 324 PLDQDT 329
D T
Sbjct: 563 AGDAST 568
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 35/302 (11%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P V ++ L+ A + K + ++ L QM +S N TY I FC R++
Sbjct: 73 PSIVEFSKLLSAIAKMNK-------FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQ 125
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ IL M + G P + + +++ FC + +A+ + +M++ G PD +
Sbjct: 126 LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV---- 238
L+ L + EA L + M+++G P TY ++ C +GE +L +++
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 239 ----------IQKGFLPYY-------------VTSFSPSLVTYNALIHGLCFFQRPDEAL 275
I G Y P + TYN LI LC + R +A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 276 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 335
+L M E ++PD V ++A+I F + +L +A +L EM + + C+P D +L+K
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIK 364
Query: 336 DF 337
F
Sbjct: 365 GF 366
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 8/228 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ L+ M P+ + ++ N+ + + + M G+S + +YS I+
Sbjct: 60 IGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINY 119
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ ++ AL + +M+ G P + L+ CH R+ EA L +M+ G P
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
T+ TLV + S+ L + ++ KG P LVTY A+I+GLC P
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKG--------CQPDLVTYGAVINGLCKRGEP 231
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D AL +L M + ++ D V Y+ +I G + + + AF+L +M+ K
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 52 EAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNE 107
A+ V ++M PD +TYN L+ C +N ++ +V Y Q R++ +
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLC-----NNGNVETALVVFEYMQK--RDMKLDI 461
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
TY +MI C +VE+ + ++ KG+ P+ +Y+ ++S FC+ +A + VE
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 227
M + G P+ Y LI+ + +L +EM G + T+ LV G
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGR 580
Query: 228 FSKVF 232
K F
Sbjct: 581 LDKSF 585
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 216
++ A+ + +M+ FP + + L+ + + L ++M G+S TY
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 217 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 276
+ +C + + S + ++++ G + PS+VT N+L++G C R EA+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLG--------YGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 277 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
++ M EM PD V+++ ++ G + + +A L M K C P
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQP 213
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 20/300 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + + +F ++ L GK+ EA +L++M D PD VTY LI A C A K
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
E++ +M P+ TY +++ F D ++ M + G P +
Sbjct: 313 K-------EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ ++ CK G+A + M D+GI P++H Y LI L RL +A +LF M
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY ++ Y G+ +++ KG +P++V NA ++
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG--------IAPNIVACNASLYS 477
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
L R EA +I G+ ++ L PD V+Y+ ++ + ++ E+ +A +L EM + C P
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MENGCEP 536
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 22/301 (7%)
Query: 40 VVKRLCGEGKLREAEAVLEKMT-----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
+++ C + A + EK T P TYN LI EA+ I +++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM---IEIAQDVFLQV 811
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
C+ P+ TY ++ + +++E + + M+ + +++ +IS K
Sbjct: 812 KSTGCI----PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 155 NKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
+ AL++ +++ D+ P YG LI L RL EA+ LF+ ML G P
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
Y+ L+ + GE L ++++G P L TY+ L+ LC R DE
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGV--------RPDLKTYSVLVDCLCMVGRVDE 979
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 333
L + + E L+PD V Y+ +I+G + L +A L EM P D T SL
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP-DLYTYNSL 1038
Query: 334 V 334
+
Sbjct: 1039 I 1039
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 41/328 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLI------------ 72
G +V++ ++ LC KL A+ V EKM PD VTY TL+
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 73 -KAACEAEKN-HNPSIPYVRIV-----------ELYHQMCV---RELSPNETTYRSMIRL 116
+ E EK+ H P + I+ E + + V + + PN TY ++I
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
+R+++A+ + M G+ P A +Y I + K+ + ALE +M KGI P+
Sbjct: 408 LLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
+ A + L R EA+ +F + G+ P TY+ +++ Y GE + L
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 237 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
E+++ G P ++ N+LI+ L R DEA ++ M EM L P V+Y+ +
Sbjct: 528 EMMENG--------CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 297 ISGFRRIRELRKAFELKLEMDQKETCWP 324
++G + ++++A EL M QK C P
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQK-GCPP 606
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 19/287 (6%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRI 91
++ + K L +G L++A L KM + V +YN LI ++
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF-------CTEA 207
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+E+Y +M + P+ TY S++ R ++ +G+L+ M GL P+ +++ I
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ ++ +A E+ M D+G PDV Y +LI LC R+L A+++F++M P
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY TL++ + + V E+ + G + P +VT+ L+ LC
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV--------PDVVTFTILVDALCKAGNF 379
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
EA + L M + + P+ +Y+ +I G R+ L A EL M+
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 139/329 (42%), Gaps = 44/329 (13%)
Query: 13 TLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTY 68
++K FW+ G +V+F +V LC G EA L+ M D P+ TY
Sbjct: 346 SVKQFWS----EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 69 NTLI---------KAACEAEKN-------------------HNPSIPYVRIVELYHQMCV 100
NTLI A E N + S V +E + +M
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
+ ++PN + + R EA I + + GL P + +Y+ ++ + K E+ +
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
A+++ EM++ G PDV LI L R+ EA +F M + P TY+TL+
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
G+ + L + ++QKG P+ +T+N L LC AL++L
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKG--------CPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKA 309
M +M PD +Y+ +I G + ++++A
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 21/269 (7%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREA-EAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPS 85
E ++ N V+ L G + +A + + M+D P TY LI ++ + +
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 86 IPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
+L+ M PN Y +I F + A + + M ++G+ P +Y
Sbjct: 912 -------QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM-L 204
S ++ C + + L E+ + G+ PDV Y L+I L RL EA LF EM
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
RG++P TY++L+ + G + + +E+ + G P++ T+NALI G
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL--------EPNVFTFNALIRG 1076
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSY 293
+P+ A + + M P+ +Y
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 19/279 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNH 82
+ G + ++N ++ GK+ E + ++M+ +C +T+N +I +A
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 83 NPSIPYVRIVELYHQ-MCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ ++LY+ M R+ SP TY +I R+ EA + M + G P+
Sbjct: 873 DA-------LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
Y+ +I+ F K E A + M+ +G+ PD+ Y +L+ LC R+ E F+
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 261
E+ G++P Y+ ++ + L +E+ +P L TYN+L
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS-------RGITPDLYTYNSL 1038
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
I L +EA +I + L+P+ +++A+I G+
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 37/230 (16%)
Query: 6 RVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD--- 62
+ +V+ L+TF + +G +V+ NA + L G+ REA+ + + D
Sbjct: 445 KSGDSVSALETFEKMKTKGIAP-----NIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 63 -PDCVTYNTLIKAACE-----------AEKNHNPSIPYVRIV-----------------E 93
PD VTYN ++K + +E N P V +V +
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
++ +M +L P TY +++ +++EA+ + M +KG P+ +++ + C
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
KN E+ AL+M +M+D G PDV Y +I L ++ EA F +M
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
++ M R + + TY ++ + + +++A LR M E G +A SY+ +I
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
K++ +A+E+ M+ +G P + Y L+ L +R + L +EM G+ P
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
T+ + G+ ++ + + + +G P +VTY LI LC ++ D
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEG--------CGPDVVTYTVLIDALCTARKLDC 311
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
A E+ M PD V+Y ++ F R+L + EM++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
++ L+ +M + + PN TY MI FC R +A +LR M EK ++P ++S
Sbjct: 26 HINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSA 85
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
+I+ F K +++ +A E+ EML IFP Y +I C Q R+ +A+ + M +G
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
SP T+ TL+ YC + E+ ++G + + VTY LIHG C
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV--------ANTVTYTTLIHGFCQ 197
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
D A ++L M + PD +++ +++G +ELRKAF + ++ + E
Sbjct: 198 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 27/227 (11%)
Query: 31 EKGL----VSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNH 82
EKG+ +++N ++ C G+ +A+ +L EK +PD VT++ LI A + K
Sbjct: 38 EKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVS 97
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
E+Y +M + P TY SMI FC ++RV++A +L MA KG SP
Sbjct: 98 EAE-------EIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDV 150
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
++S +I+ +CK K + +E+ EM +GI + Y LI C L A+DL E
Sbjct: 151 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVF------------HLQDE 237
M+ G++P T+ ++ C K E K F HL+DE
Sbjct: 211 MISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHLEDE 257
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 139/294 (47%), Gaps = 19/294 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +V++N+++ LC G+ +A ++ MT PD T+N LI A + +
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
E Y +M R L P+ TY +I C +R++EA + M KG P +
Sbjct: 276 E-------EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +I+ +CK+K++ +++ EM +G+ + Y +LIQ C +L A ++F+ M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY+ L+ C G+ K + ++ + G +VTYN +I G
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG--------MDADIVTYNIIIRG 440
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+C +A +I + L PD +Y+ ++ G + R+A L +M +
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 19/288 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G L + N ++ C +L A + L KM +P VT+ +L+ C ++ ++
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++ QM PN Y ++I C +V+ A+ +L M + G+ P +
Sbjct: 171 -------LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +IS C + A M M + I+PDV + LI + R+ EA + ++EM+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
R + P TY L+ C+ + + ++ KG P +VTY+ LI+G
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF--------PDVVTYSILING 335
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
C ++ + +++ M + + + V+Y+ +I G+ R +L A E+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 34/284 (11%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P ++ L+ A + +K Y ++ L+ QM + + N T ++ FC ++
Sbjct: 79 PSIADFSRLLSAISKMKK-------YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ A+ L M + G P ++ +++ FC+ + AL M +M+ G P+V Y
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+I LC +++ A DL M G+ P TY++L+ C G +S + + ++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 243 FLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEAL 275
P T S P +VTY+ LI+GLC + R DEA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 276 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
E+ M PD V+YS +I+G+ + +++ +L EM Q+
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V+++ ++ LC +L EAE + M PD VTY+ LI C+++K +
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG----- 345
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++L+ +M R + N TY +I+ +C ++ A I R M G+ P+ +Y+ ++
Sbjct: 346 --MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C N ++ KAL + +M G+ D+ Y ++I+ +C + +A D++ + +G+
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
P TY T++ KG + L ++ + G LP
Sbjct: 464 PDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
R N + YR M+R ++++++ + M + P +SR++S K K+
Sbjct: 40 RRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDV 99
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
+ + +M GI ++ +L+ C +L A +M+ G P T+ +L+
Sbjct: 100 VIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN 159
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
+C ++ D+++ G + P++V YN +I GLC ++ D AL++L
Sbjct: 160 GFCRGDRVYDALYMFDQMVGMG--------YKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 281 MPEMLLDPDEVSYSAVISGF 300
M + + PD V+Y+++ISG
Sbjct: 212 MEKDGIGPDVVTYNSLISGL 231
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEA 78
R G ++++N ++ LC GK+ +A +L M D D VTYN +I+ C+A
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
+ + ++Y + + L P+ TY +M+ + EA + R M E G+
Sbjct: 445 GEVADAW-------DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 139 SPH 141
P+
Sbjct: 498 LPN 500
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 147/329 (44%), Gaps = 37/329 (11%)
Query: 4 LLRVSSTVATLKTFWNVPIRGFTAAGT----------------EKGLVSFNAVVKRLCGE 47
LL SS +KT N+ I G + G EK L ++++++ LC
Sbjct: 245 LLEDSSVYPNVKTH-NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 48 GKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
G + +AE+V E+ D VTYNT++ C K S+ RI+E +
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK-IKESLELWRIME-------HKN 355
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
S N +Y +I+ + +++EA I RLM KG + +Y I C N + KAL
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ E+ G DV+AY +I LC ++RL EA +L +EM G+ + L+
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
+ E+ + G P++V+YN LI GLC + EA ++ M E
Sbjct: 476 RDSRLGEASFFLREMGKNG--------CRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFEL 312
PD +YS ++ G R R++ A EL
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 62 DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRN 121
+P +YNTL+ A EA++ +V++ L+ ++PN TY +I++ C +
Sbjct: 111 EPAIRSYNTLLNAFVEAKQ-------WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
E+A G L M ++G P SYS +I+ K ++ ALE+ EM ++G+ PDV Y
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 182 LLIQLLCHQRRLLEARDLFQEMLL-RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
+LI ++ A +L+ +L + P +T++ ++ G + + + Q
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
L TY++LIHGLC D+A + + E D V+Y+ ++ GF
Sbjct: 284 --------NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 301 RRIRELRKAFELKLEMDQKET 321
R +++++ EL M+ K +
Sbjct: 336 CRCGKIKESLELWRIMEHKNS 356
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 39/307 (12%)
Query: 34 LVSFNAVVKRLCGEGKLREA---EAVLEKMTDPDCVTYNTLIKAACEAEKNHN------- 83
+V++N ++ C GK++E+ ++E + V+YN LIK E K
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 84 -PSIPYVRIVELY----HQMCVR-------------ELSPNET---TYRSMIRLFCDRNR 122
P+ Y Y H +CV E S Y S+I C + R
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+EEA +++ M++ G+ ++ + +I ++ +G+A EM G P V +Y +
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
LI LC + EA +EML G P +TY L+ C + L + +Q G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
++ +N LIHGLC + D+A+ ++ M + V+Y+ ++ GF +
Sbjct: 565 --------LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 303 IRELRKA 309
+ + +A
Sbjct: 617 VGDSNRA 623
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 24/297 (8%)
Query: 20 VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAA 75
+P +G+ A T G+ + LC G + +A V++++ D Y ++I
Sbjct: 385 MPAKGYAADKTTYGIF-----IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 76 CEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
C+ ++ S L +M + N ++I +R+ EA LR M +
Sbjct: 440 CKKKRLEEAS-------NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
G P SY+ +I CK + G+A EML+ G PD+ Y +L+ LC R++
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A +L+ + L G+ ++ L+ C G+ + + + + + +L
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR--------NCTANL 604
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
VTYN L+ G + A I M +M L PD +SY+ ++ G R + A E
Sbjct: 605 VTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 141/332 (42%), Gaps = 43/332 (12%)
Query: 40 VVKRLCGEGKLREAEAVLEKMT-----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
V+K L E R A A+ + T V Y+ +++ E ++ S RIVEL
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVS----RIVEL 68
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFC 153
+E +E S+I+ + + ++A+ + + M E G P SY+ +++ F
Sbjct: 69 IRS---QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
+ K+ K + G+ P++ Y +LI++ C ++ +AR M G P
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP----YYV--------------------- 248
+Y T++ G+ L DE+ ++G P Y +
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 249 ---TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 305
+S P++ T+N +I GL R D+ L+I M + + D +YS++I G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 306 LRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
+ KA + E+D+++ +D T +++ F
Sbjct: 306 VDKAESVFNELDERKA--SIDVVTYNTMLGGF 335
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
+R G +VS+N ++ LC GK EA A +++M + PD TY+ L+ C
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
K +EL+HQ L + + +I C ++++A+ ++ M +
Sbjct: 547 DRK-------IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+ + +Y+ ++ F K + +A + M G+ PD+ +Y +++ LC R + A
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEA 221
+ F + G+ P T++ LV A
Sbjct: 660 EFFDDARNHGIFPTVYTWNILVRA 683
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 142/329 (43%), Gaps = 38/329 (11%)
Query: 26 TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKN 81
T+ G + + + + LC + K+ EAE + E M P+ TY+ +I C K
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC---KT 282
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
N Y LY ++ V EL PN + +++ FC + A + M + G+ P+
Sbjct: 283 GNVRQAY----GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
Y+ +I CK+ M +A+ + EM + PDV Y +LI LC + ++ EA LFQ
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------ 249
+M + P TY++L+ YC + + L E+ G P +T
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 250 ---------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
P +VTY ALI EAL + M E + P++ +++
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFA 518
Query: 295 AVISGFRRIRELRKAFELKLEMDQKETCW 323
++ GF + L A + E +Q+ +CW
Sbjct: 519 CLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 19/277 (6%)
Query: 47 EGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRE 102
+G + E +L++MT P+ Y I C K +++ M
Sbjct: 212 QGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAE-------KMFELMKKHG 264
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+ PN TY +MI +C V +A G+ + + L P+ + ++ FCK +E+ A
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
+ V M+ G+ P+++ Y LI C +LEA L EM +SP TY L+
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
C++ + ++ L ++ + P S TYN+LIHG C ++AL++ M
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFP--------SSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
++P+ +++S +I G+ +R+++ A L EM K
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + L +N ++ C G + EA +L +M PD TY LI C ++
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L+ +M + P+ TY S+I +C +E+A+ + M G+ P+ +
Sbjct: 394 N-------RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+S +I +C +++ A+ + EM KGI PDV Y LI + + EA L+ +ML
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P T+ LV+ + +G S E Q+ + V + LI G
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ--------RSCWNHVGFTCLIEG 558
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
LC A M + PD SY +++ G + + + L+ +M
Sbjct: 559 LCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 27/224 (12%)
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
SP+ S++ R R + +LM +GL P Y + K K +
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ EM GI P+V+ Y + I LC ++ EA +F+ M G+ P TY +++ YC
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFSPSLV 256
G + + L E++ LP V P+L
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
YN LIHG C EA+ +L M + L PD +Y+ +I+G
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%), Gaps = 11/190 (5%)
Query: 26 TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKN 81
TA+G E +++F+ ++ C ++ A + +MT PD VTY LI A
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA------- 488
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
H + LY M + PN+ T+ ++ F R+ A+ + ++ +
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
++ +I C+N + +A +M GI PD+ +Y +++ ++R+ + L
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC 608
Query: 202 EMLLRGMSPG 211
+M+ G+ P
Sbjct: 609 DMIKTGILPN 618
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 52/349 (14%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
FN++V C G A +L+KM P V YN LI + C + + N + + +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL--LDLA 432
Query: 93 E-LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E Y +M + N+ S R C + E+A ++R M +G P +YS++++
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C +M A + EM G+ DV+ Y +++ C + +AR F EM G +P
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------- 249
TY L+ AY + S L + ++ +G LP VT
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 250 ---------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
S P++VTY AL+ G C R +EA ++L M +P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
+++ Y A+I G ++ +L +A E+K EM E +P T SL+ +
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFPATLYTYSSLIDRY 719
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 149/368 (40%), Gaps = 75/368 (20%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
AAG ++ ++ + LC GK +A +V+ +M PD TY+ ++ C A K
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 83 NPSIPY--------VRIVELYHQMC------------------VREL--SPNETTYRSMI 114
+ + V V Y M +RE+ +PN TY ++I
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM---------- 164
+ +V A + M +G P+ +YS +I CK ++ KA ++
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 165 -KVEML-----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 218
V+M D P+V YG L+ C R+ EAR L M + G P YD L
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 219 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------------SF 251
++ C G+ + ++ E+ + GF T S
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 252 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
+P++V Y +I GLC + DEA ++++ M E P+ V+Y+A+I GF I ++ E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 312 LKLEMDQK 319
L M K
Sbjct: 801 LLERMGSK 808
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 23/322 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +V++ A++ K+ A + E M P+ VTY+ LI C+A +
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 85 SIPYVRI--------VELY-HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
+ R+ V++Y Q PN TY +++ FC +RVEEA +L M+
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
+G P+ Y +I CK ++ +A E+K EM + G ++ Y LI +R
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A + +ML +P Y +++ C G+ + + L + +KG P++
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--------CQPNV 779
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
VTY A+I G + + LE+L M + P+ V+Y +I + L A L E
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 316 MDQKETCWPLDQDTNESLVKDF 337
M K+T WP +++ F
Sbjct: 840 M--KQTHWPTHTAGYRKVIEGF 859
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 145/336 (43%), Gaps = 42/336 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E + ++A++ LC GKL EA+ V +M++ TY++LI + ++
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
S ++ +M +PN Y MI C + +EA ++++M EKG P+ +
Sbjct: 729 S-------KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I F ++ LE+ M KG+ P+ Y +LI C L A +L +EM
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY----------------- 247
Y ++E + EF + L DE+ Q P+
Sbjct: 842 QTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Query: 248 --------VTSFSPSLV----TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
V +FS +LV TYN+LI LC + + A ++ M + + P+ S+ +
Sbjct: 900 MALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCS 959
Query: 296 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 331
+I G R ++ +A L + E W ++ T++
Sbjct: 960 LIKGLFRNSKISEALLLLDFISHMEIQWIEEKKTSD 995
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
N +V++ C G A L ++ D P TYN LI+A +A++ + S+
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASL------ 256
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
++ +M + L + T R C + EA L L+ + P Y+++IS
Sbjct: 257 -IHREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGL 312
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ +A++ M P+V Y L+ ++++L + + M++ G P
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+ +++LV AYC G+ S + L ++++ G +P Y V YN LI +C
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY--------VVYNILIGSIC 418
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 12/177 (6%)
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
++ + C+N ALE + D P Y LIQ RL A + +EM L
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+ G T + C G++ + L + +F P V Y LI GLC
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVE-----------TENFVPDTVFYTKLISGLCE 314
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+EA++ L M P+ V+YS ++ G ++L + + L M E C+P
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV-LNMMMMEGCYP 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 114/284 (40%), Gaps = 26/284 (9%)
Query: 22 IRGFTAAGTEKGLVS----FNAVVKRLCGEGKLREAEAVLEKMTDPDCVTY----NTLIK 73
I F AG + G +NA+V + + + E L+++ D D + N L++
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVR 208
Query: 74 AACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLM 133
C +N + SI +E ++ P+ +TY +I+ F +R++ A I R M
Sbjct: 209 KHC---RNGSFSIA----LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 134 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
+ L + CK +GK E + + PD Y LI LC
Sbjct: 262 SLANLRMDGFTLRCFAYSLCK---VGKWREALTLVETENFVPDTVFYTKLISGLCEASLF 318
Query: 194 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 253
EA D M P TY TL+ K + + + + ++ +G P SP
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP------SP 372
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
+ +N+L+H C A ++L+ M + P V Y+ +I
Sbjct: 373 KI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 33/302 (10%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHN 83
G + V+ N +K LC E K ++++ D PD VTY+TLIKA
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA--------- 425
Query: 84 PSIPYVRI------VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
Y+++ +E+ +M + + N T +++ C +++EA +L ++G
Sbjct: 426 ----YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+Y +I F + +++ KALEM EM I P V + LI LCH + A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
+ F E+ G+ P T+++++ YC +G K F +E I+ SF P T
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH--------SFKPDNYT 593
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
N L++GLC ++AL + E + D V+Y+ +IS F + ++L++A++L EM+
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 318 QK 319
+K
Sbjct: 653 EK 654
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 143/331 (43%), Gaps = 56/331 (16%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM-----TDPDCVTYNTLIKAACEAEKNHN 83
G + +FN +V C EGKL +A +LE+M +PD VTYNT++KA + + +
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ EL M L PN TY +++ +C ++EA I+ LM + + P
Sbjct: 259 -------LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ +I+ C M + LE+ M + PDV Y LI LEAR L ++M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 204 L------------------------------------LRGMSPGGRTYDTLVEAYCLKGE 227
+ G SP TY TL++AY G+
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 228 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
S + E+ QKG + +T N ++ LC ++ DEA +L +
Sbjct: 432 LSGALEMMREMGQKG--------IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 288 PDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
DEV+Y +I GF R ++ KA E+ EM +
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 59/296 (19%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
F+ + EGK A + +KM P+ +T NTL+ + SI R
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF--SISSAR-- 189
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E++ M +S N T+ ++ +C ++E+A+G+L R++S F
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE---------------RMVSEF 234
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
N PD Y +++ + + RL + ++L +M G+ P
Sbjct: 235 KVN-------------------PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNR 275
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
TY+ LV YC G + F + + + Q L P L TYN LI+GLC
Sbjct: 276 VTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL--------PDLCTYNILINGLCNAGSMR 327
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 328
E LE++ M + L PD V+Y+ +I G FEL L ++ ++ ++ D
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDG---------CFELGLSLEARKLMEQMEND 374
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN+++ LC GK A +++ + PD T+N++I C+ + +
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE-------KA 575
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E Y++ P+ T ++ C E+A+ + E+ +Y+ +IS
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISA 634
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
FCK+K++ +A ++ EM +KG+ PD Y I LL +L E +L ++
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 19/294 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNH 82
+ G V +N ++ LC +G L +++ M P+ VTYNTLI C K
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ V L +M + PN+ TY ++I + R +AV +L M E+G +
Sbjct: 310 -------KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
YS +IS K + +A+ + +M +KG P++ Y +L+ LC + + EA+++
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M+ G P TY +L++ + G + + E+ + G S + Y+ LI
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC--------SRNKFCYSVLI 474
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
GLC R EA+ + M + + PD V+YS++I G I + A +L EM
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 127/288 (44%), Gaps = 19/288 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+SFN V+K LC + A V M + PD TY TL+ C+ E+
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA------ 241
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
V L +M SP+ Y +I C + + ++ M KG P+ +Y+ +I
Sbjct: 242 -VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
C ++ KA+ + M+ P+ YG LI L QRR +A L M RG
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y L+ +G+ + L ++ +KG P++V Y+ L+ GLC +
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC--------KPNIVVYSVLVDGLCREGK 412
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
P+EA EIL M P+ +YS+++ GF + +A ++ EMD+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 22/285 (7%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYVR 90
V++N ++ LC +GKL +A ++LE+M C VTY TLI + + +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA------ 346
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
V L M R N+ Y +I + EEA+ + R MAEKG P+ YS ++
Sbjct: 347 -VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
C+ + +A E+ M+ G P+ + Y L++ EA +++EM G S
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y L++ C G + + +++ G P V Y+++I GLC
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI--------KPDTVAYSSIIKGLCGIGS 517
Query: 271 PDEALEILRGM---PEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
D AL++ M E PD V+Y+ ++ G +++ +A +L
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 102 ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
+SPN ++ +I+ C V+ A+ + R M E+ P +Y ++ CK + + +A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
+ + EM +G P Y +LI LC + L L M L+G P TY+TL+
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
CLKG+ K L + ++ + P+ VTY LI+GL +R +A+ +L M
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCI--------PNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 282 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
E ++ YS +ISG + + +A L +M +K C P
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKP 395
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
++ I P+ ++ L+I+ LC R + A ++F+ M R P G TY TL++ C +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 229 SKVFHLQDEVIQKGFLP---------------------------YYVTSFSPSLVTYNAL 261
+ L DE+ +G P ++ P+ VTYN L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
IHGLC + D+A+ +L M P++V+Y +I+G + R A L M+++
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM-------TDPDCVTYNTLIKAACEAEKN 81
G + V++++++K LCG G + A + +M + PD VTYN L+ C +
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD- 555
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF------CD---------------R 120
R V+L + M R P+ T + + CD R
Sbjct: 556 ------ISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKR 609
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
RV A I+ +M K L+P +++ I+ CK K++ A++
Sbjct: 610 QRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 23/298 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + + +N V+ L GE +++ V M +P+ TYN L+KA C KN+
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC---KNNKV 197
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+VE+ ++ C P+ +Y ++I C+ V+E R +AE+ P
Sbjct: 198 DGAKKLLVEMSNKGC----CPDAVSYTTVISSMCEVGLVKEG----RELAER-FEPVVSV 248
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ CK + A E+ EM++KGI P+V +Y LI +LC+ ++ A +ML
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
RG P T +LV+ L+G L +++I +GF P++V YN L+ G
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGF------GLQPNVVAYNTLVQG 361
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
C +A+ + M E+ P+ +Y ++I+GF + L A + +M C
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 36/333 (10%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA------ 78
G E + ++N ++K LC K+ A+ +L +M++ PD V+Y T+I + CE
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 79 ---EKNHNPSIP--------------YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRN 121
+ P + Y EL +M + +SPN +Y ++I + C+
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAY 180
++E A L M ++G P+ + S ++ AL++ +M+ G+ P+V AY
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
L+Q C +++A +F M G SP RTY +L+ + +G ++ ++++
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
G P++V Y ++ LC + EA ++ M + P +++A I G
Sbjct: 416 SGC--------CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 301 RRIRELRKAFELKLEMDQKETCWPLDQDTNESL 333
L A ++ +M+Q+ C P NE L
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELL 500
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE 77
+R G ++S++ ++ LC G++ A + L +M P+ T ++L+K
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRE--LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
+ ++L++QM +R L PN Y ++++ FC + +AV + M E
Sbjct: 329 RGTTFDA-------LDLWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
G SP+ +Y +I+ F K + A+ + +ML G P+V Y +++ LC + E
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A L + M +P T++ ++ C G + ++ Q+ P P++
Sbjct: 441 AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP-------PNI 493
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
VTYN L+ GL R +EA + R + ++ +Y+ ++ G
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 135/318 (42%), Gaps = 44/318 (13%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLI 72
WN IRGF G + +V++N +V+ C G + +A +V M + P+ TY +LI
Sbjct: 338 LWNQMIRGF---GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
A++ Y+ +++M PN Y +M+ C ++ +EA ++ +
Sbjct: 395 NGF--AKRGSLDGAVYI-----WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG-IFPDVHAYGLLIQLLCHQR 191
M+++ +P +++ I C + A ++ +M + P++ Y L+ L
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 192 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-- 249
R+ EA L +E+ +RG+ TY+TL+ C G L +++ G P +T
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 250 ---------------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
+ P +++Y +I GLC ++ + +L M
Sbjct: 568 MIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMI 627
Query: 283 EMLLDPDEVSYSAVISGF 300
+ P ++S +I+ F
Sbjct: 628 SAGIVPSIATWSVLINCF 645
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 15/242 (6%)
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L QM ++ +E + S+I ++ E AV + + E G P Y+ ++
Sbjct: 98 LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 157
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
+ + +M G P+V Y +L++ LC ++ A+ L EM +G P
Sbjct: 158 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
+Y T++ + C G + L + F P + YNALI+GLC
Sbjct: 218 SYTTVISSMCEVGLVKEGRELAER-------------FEPVVSVYNALINGLCKEHDYKG 264
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 333
A E++R M E + P+ +SYS +I+ ++ AF +M K C P + T SL
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM-LKRGCHP-NIYTLSSL 322
Query: 334 VK 335
VK
Sbjct: 323 VK 324
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLI 72
WN +G +V + +V+ LC K +EAE+++E M+ +C T+N I
Sbjct: 409 IWN----KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
K C+A + + + R +E H+ PN TY ++ NR+EEA G+ R
Sbjct: 465 KGLCDAGR-LDWAEKVFRQMEQQHR-----CPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
+ +G+ + +Y+ ++ C G AL++ +M+ G PD ++I C Q +
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 193 LLEARDLFQEMLL--RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 250
A + + R P +Y ++ C L + +I G +
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIV------ 632
Query: 251 FSPSLVTYNALIHGLCFF 268
PS+ T++ LI+ CF
Sbjct: 633 --PSIATWSVLIN--CFI 646
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+FNA +K LC G+L AE V +M P+ VTYN L+ +A R
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN----------R 508
Query: 91 IVELY---HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
I E Y ++ +R + + +TY +++ C+ A+ ++ M G SP + +
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568
Query: 148 IISRFCKNKEMGKALEMKVEMLD------KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
II +CK GKA E +MLD + PDV +Y +I LC + L +
Sbjct: 569 IILAYCKQ---GKA-ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Query: 202 EMLLRGMSPGGRTYDTLVEAYCL 224
M+ G+ P T+ L+ + L
Sbjct: 625 RMISAGIVPSIATWSVLINCFIL 647
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 22/293 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+F+ V+ G+LR+A VL M +P+ + NT I A + +
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR-------LEKA 296
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ +M V + PN TY MIR +CD +RVEEA+ +L M KG P SY I+
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356
Query: 152 FCKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
CK K + + ++ +M + G+ PD Y LI +L EA ++ +G
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y +V A C +G S+ L +E++ KG P P +VTY A+++G C
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------PDVVTYTAVVNGFCRLGE 469
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 323
D+A ++L+ M P+ VSY+A+++G R K+ E + M+ E W
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT---GKSLEAREMMNMSEEHW 519
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 30/310 (9%)
Query: 25 FTAAGTEKGL----VSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAA 75
F EKG + ++A+V LC EG++ EA+ ++ +M PD VTY ++
Sbjct: 405 FLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Query: 76 C---EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
C E +K +L M PN +Y +++ C + EA ++ +
Sbjct: 465 CRLGEVDKAK----------KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNM 514
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
E SP++ +YS I+ + ++ +A ++ EM+ KG FP LL+Q LC R
Sbjct: 515 SEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR 574
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
EAR +E L +G + + T++ +C E + D++ Y+ +
Sbjct: 575 THEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM--------YLINKH 626
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+ TY L+ L R EA E+++ M +DP V+Y VI + ++ ++ +
Sbjct: 627 ADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI 686
Query: 313 KLEMDQKETC 322
+M ++ C
Sbjct: 687 LEKMISRQKC 696
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 42/319 (13%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAE---------- 79
VS+ ++ LC E ++ E +++KM PD VTYNTLI + +
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLK 407
Query: 80 --KNHNPSIPYVRIVELYHQMC-----------VREL------SPNETTYRSMIRLFCDR 120
+ I + + H +C + E+ P+ TY +++ FC
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
V++A +L++M G P+ SY+ +++ C+ + +A EM + P+ Y
Sbjct: 468 GEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
+++ L + +L EA D+ +EM+L+G PG + L+++ C G + +E +
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
KG + ++V + +IHG C D AL +L M + D +Y+ ++
Sbjct: 588 KGC--------AINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639
Query: 301 RRIRELRKAFELKLEMDQK 319
+ + +A EL +M K
Sbjct: 640 GKKGRIAEATELMKKMLHK 658
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
++ +A+ +L LM G+ P+ + I F + + KAL M GI P+V Y
Sbjct: 257 QLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 316
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+I+ C R+ EA +L ++M +G P +Y T++ C + +V L ++ ++
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
L P VTYN LIH L DEAL L+ E D++ YSA++
Sbjct: 377 HGL-------VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 302 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
+ + +A +L EM K C P D T ++V F
Sbjct: 430 KEGRMSEAKDLINEMLSKGHC-PPDVVTYTAVVNGF 464
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 17/230 (7%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACE 77
+R G G V N +++ LC +G+ EA +E+ + C V + T+I C+
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
++ + + M + + TY +++ + R+ EA +++ M KG
Sbjct: 607 NDE-------LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV--HAYGLLIQLLCHQRRLLE 195
+ P +Y +I R+C +MGK ++ V +L+K I Y +I+ LC +L E
Sbjct: 660 IDPTPVTYRTVIHRYC---QMGKVDDL-VAILEKMISRQKCRTIYNQVIEKLCVLGKLEE 715
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
A L ++L +T L+E Y KG + + + + +P
Sbjct: 716 ADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 44/226 (19%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
Y SM+ + + + +L LM +G+ +++SR++ + + ++ AL++ M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
G+ P++ L+C+ T D V A L+
Sbjct: 269 QRAGVEPNL--------LICNT-----------------------TIDVFVRANRLEKAL 297
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
+ +Q V P++VTYN +I G C R +EA+E+L M P
Sbjct: 298 RFLERMQ------------VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 334
D+VSY ++ + + + + +L +M ++ P DQ T +L+
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVP-DQVTYNTLI 390
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 21/310 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E + + +++ C +G ++ A + +++T+ P TY LI C+ +
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
I L ++M + ++ + + ++I +C + V+EA I +M +KG +
Sbjct: 384 EI-------LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+ I S F + K +A + M++ G+ +Y LI + C + + EA+ LF EM
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G+ P TY+ ++ AYC +G+ + L+ + G P TY +LIHG
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG--------MDPDSYTYTSLIHG 548
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
C DEA+ + M LD + V+Y+ +ISG + + +AF L EM +K +
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK--GYT 606
Query: 325 LDQDTNESLV 334
+D +L+
Sbjct: 607 IDNKVYTALI 616
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 19/301 (6%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEA 78
R +G + + S VV+ LC G++ +++ ++++ + P+ TYNT+I A +
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
+ + + M + N+ TY ++ L ++ +A + M E+G+
Sbjct: 273 R-------DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
Y+ +IS C+ M +A + E+ +KG+ P + YG LI +C + A
Sbjct: 326 ESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
L EM +G++ ++TL++ YC KG + + D + QKG F + T
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG--------FQADVFTC 437
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
N + +R DEA + L M E + VSY+ +I + + + +A L +EM
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 319 K 319
K
Sbjct: 498 K 498
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 26 TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKN 81
++ G + +++N ++ C +GK++EA + M DPD TY +LI C A+
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ L+ +M ++ L N TY MI + +EA G+ M KG +
Sbjct: 556 DEA-------MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 142 ADSYSRII 149
Y+ +I
Sbjct: 609 NKVYTALI 616
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 22/291 (7%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++N ++ C GKL A+ V+ +M + P+ VT NT++ C ++H ++ V
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC---RHHGLNMAVV- 462
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ M + N TY ++I C + VE+A+ M E G SP A Y +IS
Sbjct: 463 ---FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C+ + A+ + VE L +G F D+ AY +LI L C + + ++ +M G
Sbjct: 520 GLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK 578
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY+TL+ + +F V + +++ + G P++ TY A+I C
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDPTVTTYGAVIDAYCSVG 630
Query: 270 RPDEALEILRGMP-EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
DEAL++ + M ++P+ V Y+ +I+ F ++ +A LK EM K
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 26/284 (9%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TD------PDCVTYNTLIKAACEAEKNHN 83
+V+ ++ LC ++ EA V EKM TD D + +NTLI C+ +
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 84 PSIPYVRIVELYHQMCVRE-LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
EL +M + E +PN TY +I +C ++E A ++ M E + P+
Sbjct: 389 AE-------ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+ + I+ C++ + A+ ++M +G+ +V Y LI C + +A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
ML G SP + Y L+ C + +++ + G FS L+ YN LI
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG--------FSLDLLAYNMLI 553
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
C ++ E+L M + PD ++Y+ +IS F + ++
Sbjct: 554 GLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 47/261 (18%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G + +V++ ++ C + +A E +LE PD Y LI C+ ++H+
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+R+VE + S + Y +I LFCD+N E+ +L M ++G P + +
Sbjct: 531 ----IRVVEKLKE---GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +IS F K+K+ M +M + G+ P V YG +I C L EA LF++M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 205 LRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQ---------------------------- 235
L ++P Y+ L+ A+ G F + L+
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 236 -------DEVIQKGFLPYYVT 249
DE++++ P +T
Sbjct: 704 ETLLKLMDEMVEQSCEPNQIT 724
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 14/289 (4%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCV-TYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
N VV L G + +A VL++M + V N + E + +I+ L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALIS 248
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
+ +SPN I C R A IL + + A ++ ++S +N
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT-- 214
++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M + G
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 215 ----YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
++TL++ C G + +E++ + L +P+ VTYN LI G C +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEA----EELLVRMKLE---ERCAPNAVTYNCLIDGYCRAGK 421
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLIKAACEAEK 80
G L+++N ++ C + E V E +TD PD +TYNTLI + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNN---TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA-EKGLS 139
+ + + QM L P TTY ++I +C ++EA+ + + M ++
Sbjct: 597 -------FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 140 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 199
P+ Y+ +I+ F K G+AL +K EM K + P+V Y L + L + + L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
EM+ + P T + L+E E K+
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 22/291 (7%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++N ++ C GKL A+ V+ +M + P+ VT NT++ C ++H ++ V
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC---RHHGLNMAVV- 462
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ M + N TY ++I C + VE+A+ M E G SP A Y +IS
Sbjct: 463 ---FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C+ + A+ + VE L +G F D+ AY +LI L C + + ++ +M G
Sbjct: 520 GLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY+TL+ + +F V + +++ + G P++ TY A+I C
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDPTVTTYGAVIDAYCSVG 630
Query: 270 RPDEALEILRGMP-EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
DEAL++ + M ++P+ V Y+ +I+ F ++ +A LK EM K
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TD------PDCVTYNTLIKAACEAEKNHN 83
+V+ ++ LC ++ EA V E+M TD D + +NTLI C+ +
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
VR+ + CV PN TY +I +C ++E A ++ M E + P+
Sbjct: 389 AEELLVRMK--LEERCV----PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+ + I+ C++ + A+ ++M +G+ +V Y LI C + +A +++M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
L G SP + Y L+ C + +++ + G FS L+ YN LI
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG--------FSLDLLAYNMLIG 554
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
C ++ E+L M + PD ++Y+ +IS F + ++
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 14/289 (4%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCV-TYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
N VV L G + +A VL++M + V N + E + +I+ L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
+ +SPN I C R A IL + + A ++ ++S +N
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT-- 214
++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M + G
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 215 ----YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
++TL++ C G + +E++ + L P+ VTYN LI G C +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLIDGYCRAGK 421
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHN 83
AG + A++ LC + +A V+EK+ + D + YN LI C+ KN+
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD--KNNA 562
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ E+ M P+ TY ++I F E ++ M E GL P
Sbjct: 563 E-----KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 144 SYSRIISRFCKNKEMGKALEMKVEM-LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y +I +C E+ +AL++ +M L + P+ Y +LI +A L +E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
M ++ + P TY+ L + K + + L DE+++
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 22/291 (7%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++N ++ C GKL A+ V+ +M + P+ VT NT++ C ++H ++ V
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC---RHHGLNMAVV- 462
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ M + N TY ++I C + VE+A+ M E G SP A Y +IS
Sbjct: 463 ---FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C+ + A+ + VE L +G F D+ AY +LI L C + + ++ +M G
Sbjct: 520 GLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY+TL+ + +F V + +++ + G P++ TY A+I C
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDPTVTTYGAVIDAYCSVG 630
Query: 270 RPDEALEILRGMP-EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
DEAL++ + M ++P+ V Y+ +I+ F ++ +A LK EM K
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TD------PDCVTYNTLIKAACEAEKNHN 83
+V+ ++ LC ++ EA V E+M TD D + +NTLI C+ +
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
VR+ + CV PN TY +I +C ++E A ++ M E + P+
Sbjct: 389 AEELLVRMK--LEERCV----PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+ + I+ C++ + A+ ++M +G+ +V Y LI C + +A +++M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
L G SP + Y L+ C + +++ + G FS L+ YN LI
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG--------FSLDLLAYNMLIG 554
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
C ++ E+L M + PD ++Y+ +IS F + ++
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 47/261 (18%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G + +V++ ++ C + +A E +LE PD Y LI C+ ++H+
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+R+VE + S + Y +I LFCD+N E+ +L M ++G P + +
Sbjct: 531 ----IRVVEKLKE---GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +IS F K+K+ M +M + G+ P V YG +I C L EA LF++M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 205 LRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQ---------------------------- 235
L ++P Y+ L+ A+ G F + L+
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 236 -------DEVIQKGFLPYYVT 249
DE++++ P +T
Sbjct: 704 ETLLKLMDEMVEQSCEPNQIT 724
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 14/289 (4%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCV-TYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
N VV L G + +A VL++M + V N + E + +I+ L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
+ +SPN I C R A IL + + A ++ ++S +N
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT-- 214
++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M + G
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 215 ----YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
++TL++ C G + +E++ + L P+ VTYN LI G C +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLIDGYCRAGK 421
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLIKAACEAEK 80
G L+++N ++ C + AE V E +TD PD +TYNTLI + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA-EKGLS 139
+ + + QM L P TTY ++I +C ++EA+ + + M ++
Sbjct: 597 -------FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 140 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 199
P+ Y+ +I+ F K G+AL +K EM K + P+V Y L + L + + L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
EM+ + P T + L+E E K+
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 19/289 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHN 83
+G +V++N V+ C +G+ + A +L+ M D D TYN LI C + +
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR--- 318
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ L M R + PNE TY ++I F + +V A +L M GLSP+
Sbjct: 319 ----IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ +I +AL+M M KG+ P +YG+L+ LC AR + M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G+ G TY +++ C G + L +E+ + G P +VTY+ALI+
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG--------IDPDIVTYSALIN 486
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
G C R A EI+ + + L P+ + YS +I R+ L++A +
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+ +FN ++ LC EG ++ +++KM P VTYNT++ C+ + +
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR-------FK 285
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+EL M + + + TY +I C NR+ + +LR M ++ + P+ +Y+ +I
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ F ++ A ++ EML G+ P+ + LI + EA +F M +G++
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF-LPYYVTSFSPSLVTYNALIHGLCFF 268
P +Y L++ C EF + +GF + +TY +I GLC
Sbjct: 406 PSEVSYGVLLDGLCKNAEFD---------LARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
DEA+ +L M + +DPD V+YSA+I+GF ++ + A E+
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
R + N + Y +IR++ +++++ I RLM G +P + + I+ K+ E
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
EML + I PDV + +LI +LC + ++ L Q+M G +P TY+T++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
YC KG F L D + KG + TYN LIH LC R + +LR
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKG--------VDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
M + ++ P+EV+Y+ +I+GF ++ A +L EM
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 19/280 (6%)
Query: 47 EGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRE 102
EG ++++ + M +P T N ++ + ++ ++ V + +M R+
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED-------VSVWSFLKEMLKRK 228
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+ P+ T+ +I + C E++ +++ M + G +P +Y+ ++ +CK A+
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
E+ M KG+ DV Y +LI LC R+ + L ++M R + P TY+TL+ +
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
+G+ L +E++ G SP+ VT+NALI G EAL++ M
Sbjct: 349 SNEGKVLIASQLLNEMLSFG--------LSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
L P EVSY ++ G + E A + M + C
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 24/312 (7%)
Query: 13 TLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT-DPDCV---TY 68
LK F+ + +G T + VS+ ++ LC + A +M + CV TY
Sbjct: 392 ALKMFYMMEAKGLTPSE-----VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 69 NTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVG 128
+I C+ N + V L ++M + P+ TY ++I FC R + A
Sbjct: 447 TGMIDGLCK-----NGFLD--EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499
Query: 129 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 188
I+ + GLSP+ YS +I C+ + +A+ + M+ +G D + +L+ LC
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559
Query: 189 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 248
++ EA + + M G+ P ++D L+ Y GE K F + DE+ + G
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG------ 613
Query: 249 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 308
P+ TY +L+ GLC EA + L+ + + D V Y+ +++ + L K
Sbjct: 614 --HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 671
Query: 309 AFELKLEMDQKE 320
A L EM Q+
Sbjct: 672 AVSLFGEMVQRS 683
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 38/319 (11%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +V+ NA++ GK+ + +L +M + P+ TYN L+ K +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY---SKRKDV 810
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
S ++ LY + + + P++ T S++ C+ N +E + IL+ +G+ +
Sbjct: 811 STSFL----LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ +IS+ C N E+ A ++ M GI D ++ +L R E+R + EM
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT--------------- 249
+G+SP R Y L+ C G+ F +++E+I P V
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 250 ------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
P++ ++ L+H C EALE+ M L D VSY+ +I
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 298 SGFRRIRELRKAFELKLEM 316
+G ++ AFEL EM
Sbjct: 1047 TGLCAKGDMALAFELYEEM 1065
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 22/314 (7%)
Query: 26 TAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKN 81
T G ++ +++K LC G LREAE L+ + D V YNTL+ A C++
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN- 668
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG-LSP 140
+ V L+ +M R + P+ TY S+I C + + A+ + +G + P
Sbjct: 669 ------LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
+ Y+ + K + + + +M + G PD+ +I ++ + DL
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 260
EM + P TY+ L+ Y + + S F L +I G LP +T S
Sbjct: 783 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS-------- 834
Query: 261 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
L+ G+C + L+IL+ ++ D +++ +IS E+ AF+L M
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 321 TCWPLDQDTNESLV 334
LD+DT +++V
Sbjct: 895 I--SLDKDTCDAMV 906
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 128/282 (45%), Gaps = 20/282 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN +V LC GK+ EAE + MT P+ V+++ LI + S ++
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING-------YGNSGEGLKA 602
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++ +M P TY S+++ C + EA L+ + + Y+ +++
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSP 210
CK+ + KA+ + EM+ + I PD + Y LI LC + + + A +E RG + P
Sbjct: 663 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y V+ G++ + ++++ G +P +VT NA+I G +
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG--------HTPDIVTTNAMIDGYSRMGK 774
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
++ ++L M P+ +Y+ ++ G+ + +++ +F L
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 45/325 (13%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC-------------- 76
V +N ++ +C G L +A ++ +M PD TY +LI C
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 77 -EAEKNHNPS-IPYVRIVE-------------LYHQMCVRELSPNETTYRSMIRLFCDRN 121
EA N P+ + Y V+ QM +P+ T +MI +
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
++E+ +L M + P+ +Y+ ++ + K K++ + + ++ GI PD
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
L+ +C L + + + RG+ T++ L+ C GE + F L
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK----- 888
Query: 242 GFLPYYVTSFSPSLV--TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
+TS SL T +A++ L R E+ +L M + + P+ Y +I+G
Sbjct: 889 -----VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 300 FRRIRELRKAFELKLEMDQKETCWP 324
R+ +++ AF +K EM + C P
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPP 968
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 17/247 (6%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEK- 80
++ F G E +FN ++ + C G++ A +++ MT +L K C+A
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI----SLDKDTCDAMVS 907
Query: 81 --NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
N N R+V H+M + +SP Y +I C ++ A + M +
Sbjct: 908 VLNRNHRFQESRMV--LHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 965
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
P + S ++ K + +A + ML + P + ++ L+ L C ++EA +
Sbjct: 966 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 1025
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
L M G+ +Y+ L+ C KG+ + F L +E+ GFL + TY
Sbjct: 1026 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL--------ANATTY 1077
Query: 259 NALIHGL 265
ALI GL
Sbjct: 1078 KALIRGL 1084
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
+A+V L + +E+ VL +M+ P+ Y LI C I +V+
Sbjct: 903 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV-----GDIKTAFVVK 957
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
+M ++ P +M+R + +EA +LR M + L P S++ ++ C
Sbjct: 958 --EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 1015
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
KN + +ALE++V M + G+ D+ +Y +LI LC + + A +L++EM G
Sbjct: 1016 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1075
Query: 214 TYDTLVEAYCLK-GEFSKVFHLQDEVIQKGFLPYYVTSFSPS 254
TY L+ + FS + +++ +GF +TS S S
Sbjct: 1076 TYKALIRGLLARETAFSGADIILKDLLARGF----ITSMSLS 1113
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 21/297 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +V++N ++ LC L EA+ + +MT+ PD T LI C+ N
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+EL+ +M + + + TY +++ F ++ A I M K + P S
Sbjct: 500 -------MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +++ C + +A + EM+ K I P V +I+ C + ++M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHL--QDEVIQKGFLPYYVTSFSPSLVTYNALI 262
G P +Y+TL+ + + SK F L + E Q G +P + TYN+++
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP--------DVFTYNSIL 664
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
HG C + EA +LR M E ++PD +Y+ +I+GF L +AF + EM Q+
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 23/304 (7%)
Query: 25 FTAAGTEKG----LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAAC 76
F + EKG +V++N ++ +G + EA ++ M P TYNT+I C
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 77 EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
+ K Y R E++ +M LSP+ TTYRS++ C + V E + M +
Sbjct: 317 KHGK-------YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
+ P +S ++S F ++ + KAL + + G+ PD Y +LIQ C + + A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 197 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 256
+L EML +G + TY+T++ C + + L +E+ ++ P
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF--------PDSY 481
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
T LI G C A+E+ + M E + D V+Y+ ++ GF ++ ++ A E+ +M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 317 DQKE 320
KE
Sbjct: 542 VSKE 545
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 162/385 (42%), Gaps = 80/385 (20%)
Query: 20 VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAA 75
+P +GF+ G+ ++N V+ LC GK A+ V +M PD TY +L+ A
Sbjct: 296 MPGKGFSP-----GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 76 C------EAEK-----NHNPSIP----YVRIVELYHQM-----------CVRE--LSPNE 107
C E EK +P + ++ L+ + V+E L P+
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
Y +I+ +C + + A+ + M ++G + +Y+ I+ CK K +G+A ++ E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM--------------LLRGMSPGGR 213
M ++ +FPD + +LI C L A +LFQ+M LL G G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 214 ---------------------TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
+Y LV A C KG ++ F + DE+I K +
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK--------NIK 582
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
P+++ N++I G C + L M PD +SY+ +I GF R + KAF L
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 313 KLEMDQKETCWPLDQDTNESLVKDF 337
+M++++ D T S++ F
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGF 667
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 15/296 (5%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
F+ G+ + F+ +++ KLREA + T+ AC A
Sbjct: 158 FSNCGSNDSV--FDLLIRTYVQARKLREAHEAFTLLRSKGF----TVSIDACNALIGSLV 211
Query: 85 SIPYVRIV-ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
I +V + +Y ++ + N T M+ C ++E+ L + EKG+ P
Sbjct: 212 RIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIV 271
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ +IS + M +A E+ M KG P V+ Y +I LC + A+++F EM
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
L G+SP TY +L+ C KG+ + +K F P LV +++++
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVET--------EKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D+AL + E L PD V Y+ +I G+ R + A L+ EM Q+
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V++N ++ G + A+ + M P ++Y+ L+ A C K H
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS--KGH-----LA 567
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++ +M + + P SMI+ +C + L M +G P SY+ +I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 150 SRFCKNKEMGKALEM--KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
F + + M KA + K+E G+ PDV Y ++ C Q ++ EA + ++M+ RG
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
++P TY ++ + + ++ F + DE++Q+GF P
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
N+++K C G + E+ LEKM PDC++YNTLI E+N + + V+ +E
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR-EENMSKAFGLVKKME 647
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L P+ TY S++ FC +N+++EA +LR M E+G++P +Y+ +I+ F
Sbjct: 648 EEQG----GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 154 KNKEMGKALEMKVEMLDKGIFPD 176
+ +A + EML +G PD
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPD 726
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 29/274 (10%)
Query: 24 GFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHN 83
GF + +S +A++ L G+L +A++ L +M V+ ++ + N
Sbjct: 103 GFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSN-- 160
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
N++ + +IR + ++ EA L+ KG + D
Sbjct: 161 -------------------CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID 201
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+ + +I + + A + E+ G+ +V+ +++ LC ++ + ++
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+G+ P TY+TL+ AY KG + F L + + KG FSP + TYN +I+
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG--------FSPGVYTYNTVIN 313
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
GLC + + A E+ M L PD +Y +++
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 23/298 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G G + +N +++ +C EG+ E+ +L +M D P T N + C AE+
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY--GCLAER---- 522
Query: 85 SIPYVRIVELYHQMCVRELSP--NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+V ++L +M P TT+ +++ C+ R +A L +A +G H
Sbjct: 523 -CDFVGALDLLKKMRFYGFEPWIKHTTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHM 579
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+ + I KN+ + + LE+ ++ G PDV AY +LI+ LC R +EA LF E
Sbjct: 580 VASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNE 639
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M+ +G+ P TY+++++ +C +GE + + Y +P ++TY +LI
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC--------IVRMYEDEKNPDVITYTSLI 691
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
HGLC RP EA+ M P+ +++ A+I G + +A EM++KE
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKE 749
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 7/186 (3%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD + Y+ LIKA C+A + I L+++M + L P TY SMI +C
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADI-------LFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
++ + + M E +P +Y+ +I C + +A+ EM K +P+ +
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMA 724
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
LIQ LC EA F+EM + M P Y +LV ++ + F + E++ KG
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Query: 243 FLPYYV 248
P V
Sbjct: 785 RFPVSV 790
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 27/247 (10%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
+ + P+ + +I N+V+ AV +L + + GL P Y+ II CK +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
+L++ EM D G+ P + L + + A DL ++M G P + LV+
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS---------------------------P 253
C G D+V +GFL + V S + P
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCP 612
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 313
++ Y+ LI LC R EA + M L P +Y+++I G+ + E+ +
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 314 LEMDQKE 320
+ M + E
Sbjct: 673 VRMYEDE 679
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 13/193 (6%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC-E 77
R A G +++++ ++K LC + EA+ + +M P TYN++I C E
Sbjct: 603 RDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKE 662
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
E + S IV +Y E +P+ TY S+I C R EA+ M K
Sbjct: 663 GEIDRGLSC----IVRMYED----EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
P+ ++ +I CK G+AL EM +K + PD Y L+ +
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 198 DLFQEMLLRGMSP 210
+F+EM+ +G P
Sbjct: 775 GIFREMVHKGRFP 787
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 19/256 (7%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D YN + A+ + N S+ + +V++ + C +SP + IR + V
Sbjct: 105 DMYAYNAM--ASILSRARQNASLKAL-VVDVLNSRCF--MSPGAFGF--FIRCLGNAGLV 157
Query: 124 EEAVGILRLMAEKGLS-PHADSYSRIISRFCK-NKEMGKALEMKV-EMLDKGIFPDVHAY 180
+EA + + E GL P+A +Y+ ++ K N + +E ++ EM D G D
Sbjct: 158 DEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTL 217
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
++Q+ C+ + A +F E+L RG LV ++C G+ K F L + + +
Sbjct: 218 TPVLQVYCNTGKSERALSVFNEILSRGWLDE-HISTILVVSFCKWGQVDKAFELIEMLEE 276
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+ Y T Y LIHG R D+A ++ M M ++ D Y +I G
Sbjct: 277 RDIRLNYKT--------YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGL 328
Query: 301 RRIRELRKAFELKLEM 316
+ ++L A L LE+
Sbjct: 329 CKHKDLEMALSLYLEI 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+F ++ L G + EA +V +++ + P+ TYN L++A K+++ S+ V
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI---SKSNSSSVELVE 199
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG-LSPHADSYSRII 149
+ C ++ T +++++C+ + E A+ + + +G L H + ++
Sbjct: 200 ARLKEMRDCGFHF--DKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTI--LV 255
Query: 150 SRFCKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
FCK ++ KA E+ +EML ++ I + Y +LI + R+ +A LF++M GM
Sbjct: 256 VSFCKWGQVDKAFEL-IEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGM 314
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
+ YD L+ C + L E+ + G P
Sbjct: 315 NADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 132/327 (40%), Gaps = 26/327 (7%)
Query: 6 RVSSTVATLKTFWNVPIRGFTAAGTEKG----LVSFNAVVKRLCGEGKLREAEAVLEKMT 61
+V TV W + F A ++G + ++NA+ L + +A++ +
Sbjct: 74 KVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVL 133
Query: 62 DPDCV----TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
+ C + I+ A S + R+ E+ +CV PN TY ++
Sbjct: 134 NSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREM--GLCV----PNAYTYNCLLEAI 187
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSR--IISRFCKNKEMGKALEMKVEMLDKGIFP 175
N + RL + H D ++ ++ +C + +AL + E+L +G +
Sbjct: 188 SKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG-WL 246
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
D H +L+ C ++ +A +L + + R + +TY L+ + + K F L
Sbjct: 247 DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLF 306
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
+++ + G + + Y+ LI GLC + + AL + + + PD
Sbjct: 307 EKMRRMGM--------NADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
Query: 296 VISGFRRIRELRKAFELKL-EMDQKET 321
++ F EL + E+ + ++D+K
Sbjct: 359 LLCSFSEESELSRITEVIIGDIDKKSV 385
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 145/302 (48%), Gaps = 19/302 (6%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
++ A+G +V + ++K + +A VL++M + PD YN+LI +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
A++ V +VE L PN TY + I + + + A ++ M E G
Sbjct: 500 AKRMDEARSFLVEMVE-------NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+ P+ + +I+ +CK ++ +A M+D+GI D Y +L+ L ++ +A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
++F+EM +G++P +Y L+ + G K + DE++++G +P+++
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL--------TPNVII 664
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
YN L+ G C ++A E+L M L P+ V+Y +I G+ + +L +AF L EM
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 318 QK 319
K
Sbjct: 725 LK 726
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 19/288 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +N+++ L ++ EA + L +M + P+ TY I EA + +
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
YV+ +M + PN+ +I +C + +V EA R M ++G+ A +
Sbjct: 542 D-KYVK------EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +++ KN ++ A E+ EM KGI PDV +YG+LI + +A +F EM+
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G++P Y+ L+ +C GE K L DE+ KG P+ VTY +I G
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL--------HPNAVTYCTIIDG 706
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
C EA + M L PD Y+ ++ G R+ ++ +A +
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 132/301 (43%), Gaps = 38/301 (12%)
Query: 47 EGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRE 102
EG + +A+A+ + M P Y +LI+ C EKN EL +M R
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR-EKNVRQG------YELLVEMKKRN 412
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+ + TY ++++ C ++ A I++ M G P+ Y+ +I F +N G A+
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
+ EM ++GI PD+ Y LI L +R+ EAR EM+ G+ P TY + Y
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYV------------------TSFSPSLV-------- 256
EF+ E+ + G LP V S S+V
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 257 -TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
TY L++GL + D+A EI R M + PD SY +I+GF ++ ++KA + E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 316 M 316
M
Sbjct: 653 M 653
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 32 KGLV----SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHN 83
KGLV +++ ++ LC +L +A+++L +M D TY+ LI + +N +
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG-RNAD 329
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ V H+M ++ Y I + +E+A + M GL P A
Sbjct: 330 AAKGLV------HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ +I +C+ K + + E+ VEM + I + YG +++ +C L A ++ +EM
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ G P Y TL++ + F + E+ ++G +P + YN+LI
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG--------IAPDIFCYNSLII 495
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
GL +R DEA L M E L P+ +Y A ISG+ E A + EM
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 23/264 (8%)
Query: 23 RGFTAAGTEKGL----VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKA 74
R F E GL ++ A + + A+ +++M + P+ V LI
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 75 ACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
C+ K + Y M + + + TY ++ ++V++A I R M
Sbjct: 567 YCKKGK-------VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
KG++P SY +I+ F K M KA + EM+++G+ P+V Y +L+ C +
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 254
+A++L EM ++G+ P TY T+++ YC G+ ++ F L DE+ KG +P SF
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP---DSF--- 733
Query: 255 LVTYNALIHGLCFFQRPDEALEIL 278
Y L+ G C + A+ I
Sbjct: 734 --VYTTLVDGCCRLNDVERAITIF 755
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 16/272 (5%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++ ++ L K+ +AE + +M PD +Y LI + S
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS------ 647
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++ +M L+PN Y ++ FC +E+A +L M+ KGL P+A +Y II
Sbjct: 648 -SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+CK+ ++ +A + EM KG+ PD Y L+ C + A +F +G +
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASS 765
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
++ L+ + K F K L+ EV+ + + P+ VTYN +I LC
Sbjct: 766 TAPFNALIN-WVFK--FGKT-ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
+ A E+ M L P ++Y+++++G+ ++
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 140/334 (41%), Gaps = 62/334 (18%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA 78
R G + S+ ++ G +++A ++ ++M + P+ + YN L+ C +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
+ EL +M V+ L PN TY ++I +C + EA + M KGL
Sbjct: 676 GEIEKAK-------ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 139 SPHADSYSRIISRFCKNKEMGKAL------------------------------EMKVEM 168
P + Y+ ++ C+ ++ +A+ E+K E+
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 169 LDK---GIF-----PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
L++ G F P+ Y ++I LC + L A++LF +M + P TY +L+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
Y G +++F + DE I G P + Y+ +I+ +AL ++
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAG--------IEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 281 M--PEMLLDPDEVSYS---AVISGFRRIRELRKA 309
M + D ++S S A++SGF ++ E+ A
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 41/304 (13%)
Query: 54 EAVLEKMTDPDCVTYNTLIKAACEA-------------EKNHNPSIPYVR-IVELYHQMC 99
+ ++E+ D TY+ LI A C A EK + V ++L M
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269
Query: 100 VRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMG 159
+ L P + TY +I C R+E+A +L M G+S +YS +I K +
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 160 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
A + EM+ GI + Y I ++ + + +A+ LF M+ G+ P + Y +L+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 220 EAYCLKGEFSKVFHLQDEVIQKGFL--PY-------------------------YVTSFS 252
E YC + + + L E+ ++ + PY +
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
P++V Y LI R +A+ +L+ M E + PD Y+++I G + + + +A
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 313 KLEM 316
+EM
Sbjct: 510 LVEM 513
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 47/328 (14%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD---PDCVTYNTLIKAACEAEKNHNPSI 86
TE+ L SF+ + LC G +A +V+E+M + P ++++++ + E + +
Sbjct: 93 TEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGV 152
Query: 87 PYVRIVE-------------LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLM 133
+ + + ++ EL P + + ++ NR++ + + M
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 134 AEKGLSPHADSYSRIISRFCK--NKEMGK-------------------ALEMKVEMLDKG 172
E+ + +Y +I C+ N ++GK AL++K M+ KG
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
+ P + Y +LI LC +RL +A+ L EM G+S TY L++ LKG +
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL-LKGRNADAA 331
Query: 233 H-LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 291
L E++ G + P + Y+ I + ++A + GM L P
Sbjct: 332 KGLVHEMVSHGI------NIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 292 SYSAVISGFRRIRELRKAFELKLEMDQK 319
+Y+++I G+ R + +R+ +EL +EM ++
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKR 411
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 18/258 (6%)
Query: 56 VLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRE-LSPNETTYRSMI 114
+LE + PD T+NTL+ C+ + YV + Y ++ P+ TY S I
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCK--------LGYVVEAKQYVTWLIQAGCDPDYFTYTSFI 197
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
C R V+ A + + M + G + SY+++I + K++ +AL + V+M D
Sbjct: 198 TGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC 257
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
P+V Y +LI LC + EA +LF++M G+ P Y L++++C + L
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
+ +++ G + P+++TYNALI G C + +A+ +L M E L PD ++Y+
Sbjct: 318 LEHMLENGLM--------PNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYN 368
Query: 295 AVISGFRRIRELRKAFEL 312
+I+G L A+ L
Sbjct: 369 TLIAGQCSSGNLDSAYRL 386
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEA 78
+ T G + VS+ ++ L K+ EA ++L KM D +C TY LI A C +
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
+ + L+ QM + P++ Y +I+ FC + ++EA G+L M E GL
Sbjct: 274 GQKS-------EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL 326
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
P+ +Y+ +I FCK K + KA+ + +ML++ + PD+ Y LI C L A
Sbjct: 327 MPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYR 385
Query: 199 LFQEMLLRGMSPGGRT 214
L M G+ P RT
Sbjct: 386 LLSLMEESGLVPNQRT 401
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 33/244 (13%)
Query: 34 LVSFNAVVKRLCGEGKLREAEA----VLEKMTDPDCVTYNTLIKAAC------------- 76
+ +FN +V C G + EA+ +++ DPD TY + I C
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 77 EAEKN--HNPSIPYVRIV-------------ELYHQMCVRELSPNETTYRSMIRLFCDRN 121
E +N H + Y +++ L +M PN TY +I C
Sbjct: 215 EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG 274
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
+ EA+ + + M+E G+ P Y+ +I FC + +A + ML+ G+ P+V Y
Sbjct: 275 QKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYN 334
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
LI+ C ++ + +A L +ML + + P TY+TL+ C G + L + +
Sbjct: 335 ALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEES 393
Query: 242 GFLP 245
G +P
Sbjct: 394 GLVP 397
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
N T+Y S++ L C + E I LM + S ++ + + FC+ G + E+K
Sbjct: 59 NVTSYASLVTLLCSQEIPYEVPKITILMIK---SCNSVRDALFVVDFCRTMRKGDSFEIK 115
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
++ K Y L+ L + E + L+ EML +SP T++TLV YC
Sbjct: 116 YKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G + +IQ G P Y T Y + I G C + D A ++ + M +
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFT--------YTSFITGHCRRKEVDAAFKVFKEMTQNG 220
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
+EVSY+ +I G +++ +A L ++M C
Sbjct: 221 CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC 257
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 15/216 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P+ +YN L++A C N + SI Y +L+ +M R++ P+ +Y+ +I+ FC + +
Sbjct: 188 PNTRSYNLLMQAFC---LNDDLSIAY----QLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
V A+ +L M KG P SY+ +++ C+ ++ +A ++ M KG PD+ Y
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+I C + R ++AR + +ML G SP +Y TL+ C +G F + +E+I KG
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 278
F P++ S N L+ G C F + +EA +++
Sbjct: 361 FSPHFSVS--------NCLVKGFCSFGKVEEACDVV 388
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 12/246 (4%)
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ EL+ + + PN +Y +++ FC + + A + M E+ + P DSY +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
FC+ ++ A+E+ +ML+KG PD +Y L+ LC + +L EA L M L+G +
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y+T++ +C + + D+++ G SP+ V+Y LI GLC
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNG--------CSPNSVSYRTLIGGLCDQG 344
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE-LKLEMDQKETCWPLDQD 328
DE + L M P + ++ GF ++ +A + +++ M ET L D
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET---LHSD 401
Query: 329 TNESLV 334
T E ++
Sbjct: 402 TWEMVI 407
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 16/234 (6%)
Query: 68 YNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPN-ETTYRSMIRLFCDRNRVEEA 126
+ LIK EA+ +P +++ +++M +P + R + L R +++A
Sbjct: 122 FTYLIKVYAEAK------LPE-KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
+ + G+ P+ SY+ ++ FC N ++ A ++ +ML++ + PDV +Y +LIQ
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 187 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 246
C + ++ A +L +ML +G P +Y TL+ + C K + + + L + KG
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG---- 290
Query: 247 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+P LV YN +I G C R +A ++L M P+ VSY +I G
Sbjct: 291 ----CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
S+N +++ C L A + KM + PD +Y LI+ C + +
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA------- 244
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+EL M + P+ +Y +++ C + ++ EA +L M KG +P Y+ +I
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FC+ A ++ +ML G P+ +Y LI LC Q E + +EM+ +G SP
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+ LV+ +C G+ + + + V++ G
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
S+ +++ C +G++ A +L+ M + PD ++Y TL+ + C ++
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK----------TQL 276
Query: 92 VELYHQMCVREL---SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
E Y +C +L +P+ Y +MI FC +R +A +L M G SP++ SY +
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I C + + EM+ KG P L++ C ++ EA D+ + ++ G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 209 SPGGRTYDTLVEAYCLKGEFSKV-FHLQDEV 238
+ T++ ++ C + E K+ L+D V
Sbjct: 397 TLHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 27/193 (13%)
Query: 18 WNVPIRGFTAAGT------------EKGLV----SFNAVVKRLCGEGKLREAEAVLEKMT 61
+ + I+GF G KG V S+ ++ LC + +LREA +L +M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 62 ----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
+PD V YNT+I C ++ + ++ M SPN +YR++I
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDAR-------KVLDDMLSNGCSPNSVSYRTLIGGL 340
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
CD+ +E L M KG SPH + ++ FC ++ +A ++ ++ G
Sbjct: 341 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS 400
Query: 178 HAYGLLIQLLCHQ 190
+ ++I L+C++
Sbjct: 401 DTWEMVIPLICNE 413
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACE 77
+R F G GL +++++ L + +A +L+K PD + Y LI+ +
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
A K + ++L M + +SP+ Y ++I+ C R +EE + M+E
Sbjct: 351 AGKIEDA-------LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
P A +++ +I C+N + +A E+ E+ G P V + LI LC L EAR
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEAR 463
Query: 198 DLFQEM--------LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
L +M LR G R++DT+VE+ + + + H D T
Sbjct: 464 LLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD------------T 511
Query: 250 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
SP +V+YN LI+G C D AL++L + L PD V+Y+ +I+G R+ +A
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 310 FEL 312
F+L
Sbjct: 572 FKL 574
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD TYN +++ E + ++ +Y++M SPN T+ ++ + R
Sbjct: 160 PDVFTYNVILRVMMREE------VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+A + M +G+SP+ +Y+ +IS C+ A ++ EM G +PD A+
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L+ C R++EA +L + G G R Y +L++ +++ F L +++K
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK- 332
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ P ++ Y LI GL + ++AL++L MP + PD Y+AVI
Sbjct: 333 -------NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 303 IRELRKAFELKLEMDQKET 321
L + L+LEM + E+
Sbjct: 386 RGLLEEGRSLQLEMSETES 404
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 19/280 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
L +F ++ L +G+ +A+ + + MT P+ VTY LI C+ +
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDAR---- 253
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+L+++M P+ + +++ FC R+ EA +LRL + G YS +I
Sbjct: 254 ---KLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ + +A E+ ML K I PD+ Y +LIQ L ++ +A L M +G+S
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y+ +++A C +G + LQ E+ + T P T+ LI +C
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSE--------TESFPDACTHTILICSMCRNG 422
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
EA EI + + P +++A+I G + EL++A
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR-LLE 195
G+S + + +IS + K KA+E M + PDV Y ++++++ + +
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A ++ EML SP T+ L++ KG S + D++ +G SP+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG--------ISPNR 233
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
VTY LI GLC D+A ++ M PD V+++A++ GF ++ + +AFEL
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 8/217 (3%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+ P+ T S++ FC N +++AV + M + G+ + +I CKN+ + AL
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
E+ M D+GI P+V Y LI LC RL +A EM + ++P T+ L++AY
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
+G+ SKV + +IQ S P++ TY++LI+GLC R DEA+++L M
Sbjct: 129 AKRGKLSKVDSVYKMMIQ--------MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
P+ V+YS + +GF + + +L +M Q+
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 19/278 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G +V++++++ LC G+L +AE L +M +P+ +T++ LI A + K
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGK---- 133
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ +Y M + PN TY S+I C NRV+EA+ +L LM KG +P+ +
Sbjct: 134 ---LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS + + F K+ + +++ +M +G+ + + LI+ ++ A +F M
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P R+Y+ ++ GE K + E +QK T ++TY +IHG
Sbjct: 251 SNGLIPNIRSYNIVLAGLFANGEVEKALS-RFEHMQK-------TRNDLDIITYTIMIHG 302
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+C EA ++ + ++PD +Y+ +I+ R
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNR 340
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 23/289 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAV---LEKM-TDPDCVTYNTLIKAACEAEKNHNP 84
G E +V+ +++V C +++A V +EKM D V LI C KN
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLC---KNR-- 62
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V +E+ +M R +SPN TY S+I C R+ +A L M K ++P+ +
Sbjct: 63 --LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+S +I + K ++ K + M+ I P+V Y LI LC R+ EA + M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G +P TY TL + L D++ Q+G + + V+ N LI G
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG--------VAANTVSCNTLIKG 232
Query: 265 LCFFQ--RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
+FQ + D AL + M L P+ SY+ V++G E+ KA
Sbjct: 233 --YFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALS 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 136/288 (47%), Gaps = 19/288 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G ++ +V ++ LC + A VL++M D P+ VTY++LI C++ + +
Sbjct: 43 GIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
H+M ++++PN T+ ++I + R ++ + + ++M + + P+ +
Sbjct: 103 E-------RRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT 155
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS +I C + + +A++M M+ KG P+V Y L R+ + L +M
Sbjct: 156 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 215
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
RG++ + +TL++ Y G+ + + G +P ++ +YN ++ G
Sbjct: 216 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP--------NIRSYNIVLAG 267
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
L ++AL M + D D ++Y+ +I G + +++A++L
Sbjct: 268 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 315
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 145/319 (45%), Gaps = 39/319 (12%)
Query: 18 WNVPIRGFTAAG-TEKGL---------------VSFNAVVKRLCGEGKLREAEAVLEKMT 61
+ + +RG+ AG T+KGL V +N +V C EG+ ++E ++EKM
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244
Query: 62 D----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL----SPNETTYRSM 113
+ PD VT+N+ I A C+ K + S ++ M + E PN TY M
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDAS-------RIFSDMELDEYLGLPRPNSITYNLM 297
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
++ FC +E+A + + E SY+ + ++ + +A + +M DKGI
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
P +++Y +L+ LC L +A+ + M G+ P TY L+ YC G+
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
L E+++ L P+ T N L+H L R EA E+LR M E D V+
Sbjct: 418 LLQEMMRNNCL--------PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 294 SAVISGFRRIRELRKAFEL 312
+ ++ G EL KA E+
Sbjct: 470 NIIVDGLCGSGELDKAIEI 488
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 34/234 (14%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREA---------------------------E 54
+R G V+ N +V LCG G+L +A +
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 55 AVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMI 114
+++E PD +TY+TL+ C+A + + L+ +M +L P+ Y I
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGR-------FAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
FC + ++ A +L+ M +KG ++Y+ +I ++ + + EM +KGI
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
P++ Y IQ LC ++ +A +L EM+ + ++P ++ L+EA+C +F
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 19/264 (7%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P T+N LI+A C++ + R EL+ +M + PNE T+ ++R +C
Sbjct: 145 PQTYTFNLLIRALCDSS-----CVDAAR--ELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
++ + +L M G+ P+ Y+ I+S FC+ + +M +M ++G+ PD+ +
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 183 LIQLLCHQRRLLEARDLFQEMLLR---GMS-PGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
I LC + ++L+A +F +M L G+ P TY+ +++ +C G L + +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 239 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+ L SL +YN + GL + EA +L+ M + + P SY+ ++
Sbjct: 318 RENDDLA--------SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 299 GFRRIRELRKAFELKLEMDQKETC 322
G ++ L A + M + C
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVC 393
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYVR 90
V++N + C +GK+ A VL+ M C TYN+LI KN
Sbjct: 560 VAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL--GIKNQ-----IFE 612
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
I L +M + +SPN TY + I+ C+ +VE+A +L M +K ++P+ S+ +I
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Query: 151 RFCKNKEMGKALEMKVEMLDKGIF---PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
FCK + +M E+ + + Y L+ L +LL+A +L + +L RG
Sbjct: 673 AFCKVPD----FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG 728
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
G Y LVE+ C K E + ++I +G+ F P+ + +I GL
Sbjct: 729 FELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY------GFDPAALM--PVIDGLGK 780
Query: 268 FQRPDEALEILRGMPEM 284
EA M EM
Sbjct: 781 MGNKKEANSFADKMMEM 797
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 31/296 (10%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
N ++ L G++ EAE +L KM + D VT N ++ C + +I V+ +
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC-GSGELDKAIEIVKGMR 493
Query: 94 LYHQMCVRELS-----------------PNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
++ + L P+ TY +++ C R EA + M +
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
L P + +Y+ I FCK ++ A + +M KG + Y LI L + ++ E
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 197 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 256
L EM +G+SP TY+T ++ C + +L DE++QK + +P++
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK--------NIAPNVF 665
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
++ LI C D A E+ + E YS + + +L KA EL
Sbjct: 666 SFKYLIEAFCKVPDFDMAQEVFETAVS-ICGQKEGLYSLMFNELLAAGQLLKATEL 720
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 134/372 (36%), Gaps = 86/372 (23%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT--------DPDCVTYNTLIKAAC-----EAEK 80
+V+FN+ + LC EGK+ +A + M P+ +TYN ++K C E K
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Query: 81 NHNPSI-----------------------PYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
SI ++ + QM + + P+ +Y ++
Sbjct: 312 TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
C + +A I+ LM G+ P A +Y ++ +C ++ A + EM+ P+
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL--- 234
+ +L+ L R+ EA +L ++M +G T + +V+ C GE K +
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKG 491
Query: 235 --------------------QDEVIQKGFLPYYVT------------------------- 249
D +I+ LP +T
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Query: 250 --SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELR 307
P V YN IH C + A +L+ M + +Y+++I G ++
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 308 KAFELKLEMDQK 319
+ L EM +K
Sbjct: 612 EIHGLMDEMKEK 623
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
LY M + ++P T+ +IR CD + V+ A + M EKG P+ ++ ++ +C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
K K LE+ M G+ P+ Y ++ C + R ++ + ++M G+ P
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 214 TYDTLVEAYCLKGEF---SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
T+++ + A C +G+ S++F + L Y+ P+ +TYN ++ G C
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDME-------LDEYLGLPRPNSITYNLMLKGFC 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 131/306 (42%), Gaps = 29/306 (9%)
Query: 18 WNVPIRGFTAAGTEKGLVSFNAV--VKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIK-- 73
W + R F++ E +S +A + R+ K+ E L + + L
Sbjct: 20 WRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLL 79
Query: 74 --AACEAEKNH-NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGIL 130
+ A+ NH + + P ++V E P+ Y ++ RVE +
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFP----ENKPSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 131 RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ 190
+ M G++P +++ +I C + + A E+ EM +KG P+ +G+L++ C
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 191 RRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 250
+ +L M G+ P Y+T+V ++C +G + +++ ++G +
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV------ 249
Query: 251 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD-------PDEVSYSAVISGFRRI 303
P +VT+N+ I LC + + L+ R +M LD P+ ++Y+ ++ GF ++
Sbjct: 250 --PDIVTFNSRISALC---KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 304 RELRKA 309
L A
Sbjct: 305 GLLEDA 310
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 45/350 (12%)
Query: 18 WNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREA-EAVLEKMTDP----DCVTYNTLI 72
WN IR +G + A+V LC K+ A E V E++ V YN LI
Sbjct: 172 WNAMIR----SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
C+A + L M P+ TY ++ + D N ++ A G++
Sbjct: 228 SGFCKAGRIEKAE-------ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M G+ A SY++++ R C+ K V+ ++ F DV +Y LI+ C
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP---YYVT 249
+A LF+EM +GM TY +L++A+ +G S L D++ + G P +Y T
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 250 ------------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
+P ++YN+LI GLC R EA+++ M
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 335
PDE+++ +I G R ++L A+++ +M K + LD+D +++L+K
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG--FTLDRDVSDTLIK 508
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYV 89
+VS++ +++ C R+A + E+M + VTY +LIKA + N S+
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL---REGNSSVAK- 380
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+L QM LSP+ Y +++ C V++A G+ M E ++P A SY+ +I
Sbjct: 381 ---KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
S C++ + +A+++ +M K PD + +I L ++L A ++ +M+ +G +
Sbjct: 438 SGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Query: 210 PGGRTYDTLVEAYC 223
DTL++A C
Sbjct: 498 LDRDVSDTLIKASC 511
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 127/333 (38%), Gaps = 41/333 (12%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N + L E + AEA+ M TY+ I C+ +K + I
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKK-------FDLID 99
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
L M P+ + + L C N+V AV M ++G P SY+ +I+
Sbjct: 100 ALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSPG 211
+ ++ A+E+ M+ G+ PD A L+ LCH R++ A ++ E + +
Sbjct: 160 FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLS 219
Query: 212 GRTYDTLVEAYC----------LKGEFSKVFHLQDEVIQKGFLPYYV------------- 248
Y+ L+ +C LK SK+ D V L YY
Sbjct: 220 TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA 279
Query: 249 ----TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
+ +YN L+ C PD+ + E D VSYS +I F R
Sbjct: 280 EMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 305 ELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
RKA+ L EM QK ++ T SL+K F
Sbjct: 340 NTRKAYRLFEEMRQKGMV--MNVVTYTSLIKAF 370
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 130/293 (44%), Gaps = 20/293 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E V++N + K G + A V+ M D PD +TY L+ C+ N
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG---NI 343
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRS-MIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ V L M R N S M+ C R++EA+ + M GLSP
Sbjct: 344 DMGLV----LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+YS +I CK + AL + EM DK I P+ +G L+ LC + LLEAR L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ G + Y+ +++ Y G + L VI+ G +PS+ T+N+LI+
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI--------TPSVATFNSLIY 511
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
G C Q EA +IL + L P VSY+ ++ + + EL+ EM
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEA 78
RGF ++ + ++ LC G++ EA ++ +M PD V Y+ +I C+
Sbjct: 356 RGFEL----NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
K + + LY +MC + + PN T+ +++ C + + EA +L + G
Sbjct: 412 GK-------FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
+ Y+ +I + K+ + +ALE+ +++ GI P V + LI C + + EAR
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
+ + L G++P +Y TL++AY G + L+ E+ +G +P P+ VTY
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG-IP-------PTNVTY 576
Query: 259 NALIHGLCFFQRPDEALEILR---------GMPEM---LLDPDEVSYSAVISGFRRIREL 306
+ + GLC + + +LR G+ +M + PD+++Y+ +I R++ L
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 307 RKAF 310
AF
Sbjct: 637 SGAF 640
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 28/242 (11%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
NE TY +++ C + ++E+AV LR K + P S++ I+S +CK + A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
+L G+ P V+++ +LI LC + EA +L +M G+ P TY+ L + + L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFS-PSLVT 257
G S + + +++ KG P +T F S++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
+ ++ GLC R DEAL + M L PD V+YS VI G ++ + A L EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 318 QK 319
K
Sbjct: 426 DK 427
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 57/318 (17%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLE----KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+++ VV LC + KL +A L K P V++N+++ C+ + +V +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK--------LGFVDM 240
Query: 92 VELYHQMCVR-ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ + ++ L P+ ++ +I C + EA+ + M + G+ P + +Y+ +
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI----QL-------------------- 186
F + A E+ +MLDKG+ PDV Y +L+ QL
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 187 ------------LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
LC R+ EA LF +M G+SP Y ++ C G+F L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
DE+ K L P+ T+ AL+ GLC EA +L + D V Y+
Sbjct: 421 YDEMCDKRIL--------PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Query: 295 AVISGFRRIRELRKAFEL 312
VI G+ + + +A EL
Sbjct: 473 IVIDGYAKSGCIEEALEL 490
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 97 QMCVRELSPNETTYR---------SMIRLFCDRNR-VEEAVGILRLMAEKGLSPHADSYS 146
Q+ + +L E T+R M+ R R V++++ IL+ M ++ L+ SY+
Sbjct: 104 QVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYN 163
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ F +E K ++ E+ DK + H Y ++ LC Q++L +A + +
Sbjct: 164 SVLYHF---RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWK 216
Query: 207 GMSPGGRTYDTLVEAYCLKG--EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P ++++++ YC G + +K F F PS+ ++N LI+G
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILING 266
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
LC EALE+ M + ++PD V+Y+ + GF + + A+E+ +M K
Sbjct: 267 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLI----KAACEAEKNHNPSIP 87
+ A++ LC +G L EA ++L+ + D V YN +I K+ C E
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA------- 487
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+EL+ + ++P+ T+ S+I +C + EA IL ++ GL+P SY+
Sbjct: 488 ----LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH------------QRRLLE 195
++ + E++ EM +GI P Y ++ + LC +R +
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-SFSPS 254
+ ++M G+ P TY+T+++ C +V HL + FL + + S
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLC------RVKHLSGAFV---FLEIMKSRNLDAS 654
Query: 255 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
TYN LI LC + +A + + E + + +Y+ +I
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 47/283 (16%)
Query: 16 TFWNVPIRGFTAAG------------TEKGLV----SFNAVVKRLCGEGKLREAEAVLEK 59
+N+ I G+ +G E G+ +FN+++ C + EA +L+
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 60 MT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
+ P V+Y TL+ A A + SI EL +M + P TY + +
Sbjct: 529 IKLYGLAPSVVSYTTLMDAY--ANCGNTKSID-----ELRREMKAEGIPPTNVTYSVIFK 581
Query: 116 LFCD-----------RNRV-EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
C R R+ E+ LR M +G+ P +Y+ II C+ K + A
Sbjct: 582 GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFV 641
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
M + + Y +LI LC + +A + + +S Y TL++A+C
Sbjct: 642 FLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHC 701
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+KG+ L +++ +G F+ S+ Y+A+I+ LC
Sbjct: 702 VKGDPEMAVKLFHQLLHRG--------FNVSIRDYSAVINRLC 736
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 130/293 (44%), Gaps = 20/293 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E V++N + K G + A V+ M D PD +TY L+ C+ N
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG---NI 343
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRS-MIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ V L M R N S M+ C R++EA+ + M GLSP
Sbjct: 344 DMGLV----LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+YS +I CK + AL + EM DK I P+ +G L+ LC + LLEAR L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ G + Y+ +++ Y G + L VI+ G +PS+ T+N+LI+
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI--------TPSVATFNSLIY 511
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
G C Q EA +IL + L P VSY+ ++ + + EL+ EM
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 564
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEA 78
RGF ++ + ++ LC G++ EA ++ +M PD V Y+ +I C+
Sbjct: 356 RGFEL----NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
K + + LY +MC + + PN T+ +++ C + + EA +L + G
Sbjct: 412 GK-------FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
+ Y+ +I + K+ + +ALE+ +++ GI P V + LI C + + EAR
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
+ + L G++P +Y TL++AY G + L+ E+ +G +P P+ VTY
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG-IP-------PTNVTY 576
Query: 259 NALIHGLCFFQRPDEALEILR---------GMPEM---LLDPDEVSYSAVISGFRRIREL 306
+ + GLC + + +LR G+ +M + PD+++Y+ +I R++ L
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 307 RKAF 310
AF
Sbjct: 637 SGAF 640
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 28/242 (11%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
NE TY +++ C + ++E+AV LR K + P S++ I+S +CK + A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
+L G+ P V+++ +LI LC + EA +L +M G+ P TY+ L + + L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFS-PSLVT 257
G S + + +++ KG P +T F S++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
+ ++ GLC R DEAL + M L PD V+YS VI G ++ + A L EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 318 QK 319
K
Sbjct: 426 DK 427
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 57/318 (17%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLE----KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+++ VV LC + KL +A L K P V++N+++ C+ + +V +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK--------LGFVDM 240
Query: 92 VELYHQMCVR-ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ + ++ L P+ ++ +I C + EA+ + M + G+ P + +Y+ +
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI----QL-------------------- 186
F + A E+ +MLDKG+ PDV Y +L+ QL
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 187 ------------LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
LC R+ EA LF +M G+SP Y ++ C G+F L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
DE+ K L P+ T+ AL+ GLC EA +L + D V Y+
Sbjct: 421 YDEMCDKRIL--------PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Query: 295 AVISGFRRIRELRKAFEL 312
VI G+ + + +A EL
Sbjct: 473 IVIDGYAKSGCIEEALEL 490
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 97 QMCVRELSPNETTYR---------SMIRLFCDRNR-VEEAVGILRLMAEKGLSPHADSYS 146
Q+ + +L E T+R M+ R R V++++ IL+ M ++ L+ SY+
Sbjct: 104 QVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYN 163
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ F +E K ++ E+ DK + H Y ++ LC Q++L +A + +
Sbjct: 164 SVLYHF---RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWK 216
Query: 207 GMSPGGRTYDTLVEAYCLKG--EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ P ++++++ YC G + +K F F PS+ ++N LI+G
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILING 266
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
LC EALE+ M + ++PD V+Y+ + GF + + A+E+ +M K
Sbjct: 267 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 321
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLI----KAACEAEKNHNPSIP 87
+ A++ LC +G L EA ++L+ + D V YN +I K+ C E
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA------- 487
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+EL+ + ++P+ T+ S+I +C + EA IL ++ GL+P SY+
Sbjct: 488 ----LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH------------QRRLLE 195
++ + E++ EM +GI P Y ++ + LC +R +
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-SFSPS 254
+ ++M G+ P TY+T+++ C +V HL + FL + + S
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLC------RVKHLSGAFV---FLEIMKSRNLDAS 654
Query: 255 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
TYN LI LC + +A + + E + + +Y+ +I
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 47/283 (16%)
Query: 16 TFWNVPIRGFTAAG------------TEKGLV----SFNAVVKRLCGEGKLREAEAVLEK 59
+N+ I G+ +G E G+ +FN+++ C + EA +L+
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 60 MT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
+ P V+Y TL+ A A + SI EL +M + P TY + +
Sbjct: 529 IKLYGLAPSVVSYTTLMDAY--ANCGNTKSID-----ELRREMKAEGIPPTNVTYSVIFK 581
Query: 116 LFCD-----------RNRV-EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
C R R+ E+ LR M +G+ P +Y+ II C+ K + A
Sbjct: 582 GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFV 641
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
M + + Y +LI LC + +A + + +S Y TL++A+C
Sbjct: 642 FLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHC 701
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+KG+ L +++ +G F+ S+ Y+A+I+ LC
Sbjct: 702 VKGDPEMAVKLFHQLLHRG--------FNVSIRDYSAVINRLC 736
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 40/307 (13%)
Query: 41 VKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
VK L EG + EA V + D VT N+++ +A K R EL+
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLD-------RFWELHK 204
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
+M E R +IR CD V E +L+ ++GL P Y+++IS FC+
Sbjct: 205 EMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG 262
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 216
E+ M+ FP ++ Y +I+ LC ++ LEA +F+ + +G +P Y
Sbjct: 263 NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Query: 217 TLVEAYCLKGEFSKVFHLQDEVIQKGFLP----YYV-----------------------T 249
T++ +C KG L E+I+KG P Y V
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
Query: 250 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+ ++++ N +I G C + DEA EI + M E + P+ ++Y+A+I GF + ++ K
Sbjct: 383 GYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG 442
Query: 310 FELKLEM 316
+L E+
Sbjct: 443 LKLYKEL 449
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 27/283 (9%)
Query: 40 VVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELY 95
+++ LC G + E +L++ DP Y LI CE Y + E+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGN-------YACMSEVL 271
Query: 96 HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 155
H M P+ Y+ +I+ C + EA I + + +KG +P Y+ +I FC+
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 156 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR----LLEARDLFQEMLLRGMSPG 211
+G A ++ EM+ KG+ P+ AY ++I H +R L+EA + EML G
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYNVMIH--GHFKRGEISLVEA--FYNEMLRNGYGGT 387
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
+ +T+++ +C G+ + F + + + G +P+ +TYNALI G C +
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV--------TPNAITYNALIKGFCKENKV 439
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 314
++ L++ + + + L P ++Y+A++ + + + L++
Sbjct: 440 EKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNLEI 482
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
P T ++ + VEEA+ + ++ + G+S + + ++ K +++ +
Sbjct: 141 FKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFW 200
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
E+ EM++ D LI+ LC + E +L ++ L +G+ PG Y L+ +
Sbjct: 201 ELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
C G ++ + + +I PS+ Y +I GLC ++ EA I + +
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHF--------PSMYIYQKIIKGLCMNKKQLEAYCIFKNLK 310
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ PD V Y+ +I GF L A +L EM +K
Sbjct: 311 DKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 21/307 (6%)
Query: 18 WNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVL-----EKMTDPDCVTYNTLI 72
W+V I A+ E V +N ++ LC G+ +A+ +L EK C +YN++I
Sbjct: 539 WDV-INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+ + VE Y +M SPN T+ S+I FC NR++ A+ +
Sbjct: 598 DGFVKVGDTDSA-------VETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M L +Y +I FCK +M A + E+ + G+ P+V Y LI + +
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
+ A DL+++M+ G+S TY T+++ G + L E++ G +
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV-------- 762
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
P + + L++GL + +A ++L M + + P+ + YS VI+G R L +AF L
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Query: 313 KLEMDQK 319
EM +K
Sbjct: 823 HDEMLEK 829
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 141/330 (42%), Gaps = 52/330 (15%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +++ ++V C +L +A + +M + PD V ++ +++ C+
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCK------- 392
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIR----------------------------- 115
++ + +E Y +M ++P+ +MI+
Sbjct: 393 NMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC 452
Query: 116 -----LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 170
LFC + +V+ A L++M +KG+ P+ Y+ ++ C+ K M A + EML+
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
KG+ P+ Y +LI + A D+ +M Y+T++ C G+ SK
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 231 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
+ +I++ +S S +YN++I G D A+E R M E P+
Sbjct: 573 AKEMLQNLIKE-------KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNV 625
Query: 291 VSYSAVISGFRRIRELRKAFELKLEMDQKE 320
V+++++I+GF + + A E+ EM E
Sbjct: 626 VTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 42/293 (14%)
Query: 56 VLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSP-NETTYRSMI 114
V+ + +PD + ++ ++AAC+ P + V ++L +M + P ++ TY S+I
Sbjct: 265 VMSRGAEPDGLLFSLAVQAACKT-----PDL--VMALDLLREMRGKLGVPASQETYTSVI 317
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
F +EEAV ++ M G+ + + +++ +CK E+GKAL++ M ++G+
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE------- 227
PD + ++++ C + +A + + M ++P T+++ CLK E
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALE 436
Query: 228 -FSKVFHLQDEVIQKGFLPYYV-------------TSF---------SPSLVTYNALIHG 264
F+ F + I GF+ + TSF P++V YN ++
Sbjct: 437 IFNDSF---ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
C + D A I M E L+P+ +YS +I GF + ++ + A+++ +M+
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 116/245 (47%), Gaps = 16/245 (6%)
Query: 4 LLRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP 63
++V T + ++T+ R + G +V+F +++ C ++ A + +M
Sbjct: 600 FVKVGDTDSAVETY-----REMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 64 ----DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
D Y LI C K ++ Y L+ ++ L PN + Y S+I F +
Sbjct: 655 ELKLDLPAYGALIDGFC---KKNDMKTAYT----LFSELPELGLMPNVSVYNSLISGFRN 707
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
+++ A+ + + M G+S +Y+ +I K+ + A ++ E+LD GI PD
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
+ +L+ L + + L+A + +EM + ++P Y T++ + +G ++ F L DE++
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEML 827
Query: 240 QKGFL 244
+KG +
Sbjct: 828 EKGIV 832
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 30/243 (12%)
Query: 102 ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
EL+P Y ++ + R++ AV LM ++ + P + ++S ++ + +A
Sbjct: 166 ELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
E+ +M+ G+ D LL++ +R+ EA +F+ ++ RG P G + V+A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY----------------------- 258
C + L E+ K +P +++ +V +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 259 -----NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 313
+L++G C +AL++ M E L PD+V +S ++ F + E+ KA E
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 314 LEM 316
+ M
Sbjct: 404 MRM 406
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 23/244 (9%)
Query: 84 PSIPYVRIV--------------ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGI 129
P +PYV V E+Y++M + ++ + T + ++R + EEAV I
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKI 261
Query: 130 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLC 188
R + +G P +S + CK ++ AL++ EM K G+ Y +I
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFV 321
Query: 189 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 248
+ + EA + EM+ G+ +LV YC E K L + + ++G
Sbjct: 322 KEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG------ 375
Query: 249 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 308
+P V ++ ++ C ++A+E M + + P V +I G +
Sbjct: 376 --LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEA 433
Query: 309 AFEL 312
A E+
Sbjct: 434 ALEI 437
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 137/311 (44%), Gaps = 21/311 (6%)
Query: 16 TFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTL 71
T W + + G + +N +V G +AE +L +M + PD TYNTL
Sbjct: 186 TVWKI-FKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 72 IKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILR 131
I C+ + + + +M ++PN TY S I F R+ EA + R
Sbjct: 245 ISVYCKKSMHFEA-------LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR 297
Query: 132 LMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR 191
+ + + H +Y+ +I +C+ ++ +AL ++ M +G P V Y +++ LC
Sbjct: 298 EIKDDVTANHV-TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 192 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF 251
R+ EA L EM + + P T +TL+ AYC + ++ ++I+ G
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL-------- 408
Query: 252 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
+ +Y ALIHG C + A E L M E P +YS ++ GF + + +
Sbjct: 409 KLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITK 468
Query: 312 LKLEMDQKETC 322
L E +++ C
Sbjct: 469 LLEEFEKRGLC 479
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 18/288 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD---PDCVTYNTLIKAACEAEKNHNP 84
+G +V++N+ + EG++REA + ++ D + VTY TLI C N
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRM----ND 322
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+R+ E+ M R SP TY S++R C+ R+ EA +L M+ K + P +
Sbjct: 323 IDEALRLREV---MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNIT 379
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+ +I+ +CK ++M A+++K +M++ G+ D+++Y LI C L A++ M+
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G SPG TY LV+ + + + ++ L +E ++G + Y LI
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRG--------LCADVALYRGLIRR 491
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+C ++ D A + M + L D V ++ + + R ++ +A L
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEA 78
RGF+ G+V++N+++++LC +G++REA +L +M+ +PD +T NTLI A C+
Sbjct: 336 RGFSP-----GVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
E V V++ +M L + +Y+++I FC +E A L M EKG
Sbjct: 391 E-------DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
SP +YS ++ F + + ++ E +G+ DV Y LI+ +C ++ A+
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKV 503
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
LF+ M +G+ + T+ AY G+ ++ L D
Sbjct: 504 LFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 122/247 (49%), Gaps = 11/247 (4%)
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ +++ +M + N Y ++ E+A +L M EKG+ P +Y+ +IS
Sbjct: 187 VWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+CK +AL ++ M G+ P++ Y I + R+ EA LF+E + ++
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTA 305
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY TL++ YC + + L++ + +G FSP +VTYN+++ LC R
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRG--------FSPGVVTYNSILRKLCEDGR 357
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 330
EA +L M ++PD ++ + +I+ + +I ++ A ++K +M E+ LD +
Sbjct: 358 IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM--IESGLKLDMYSY 415
Query: 331 ESLVKDF 337
++L+ F
Sbjct: 416 KALIHGF 422
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ +++ + + GL PH + + +++ K + ++ +M+ G+ ++H Y +
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L+ +A L EM +G+ P TY+TL+ YC K + +QD + + G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+P++VTYN+ IHG R EA + R + + + + V+Y+ +I G+ R
Sbjct: 269 --------VAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCR 319
Query: 303 IRELRKAFELKLEMDQK 319
+ ++ +A L+ M+ +
Sbjct: 320 MNDIDEALRLREVMESR 336
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 20/310 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + L++F +++ LC +G +++A +LE+M P+ T+ LI C+
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++++V PN TY SMI +C +++ A + M E+GL P+ ++
Sbjct: 342 FRLFLKLVR------SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ CK G+A E+ M D+G P+++ Y I LC + R EA +L +
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ G TY L++ C + + ++ F T F + N LI
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAF--------FCRMNKTGFEADMRLNNILIAA 507
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
C ++ E+ + + + + L P + +Y+++IS + + ++ A + M ++ C P
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM-KRHGCVP 566
Query: 325 LDQDTNESLV 334
D T SL+
Sbjct: 567 -DSFTYGSLI 575
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 19/261 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++ +++ C E KL AE + +M + P+ TY TLI C+A + R
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG-------SFGRA 412
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
EL + M PN TY + I C ++R EA +L GL +Y+ +I
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
CK ++ +AL M G D+ +LI C Q+++ E+ LFQ ++ G+ P
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY +++ YC +G+ + + G +P SF TY +LI GLC
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP---DSF-----TYGSLISGLCKKSMV 584
Query: 272 DEALEILRGMPEMLLDPDEVS 292
DEA ++ M + L P EV+
Sbjct: 585 DEACKLYEAMIDRGLSPPEVT 605
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 136/270 (50%), Gaps = 20/270 (7%)
Query: 48 GKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
G+L EA ++ M + P +T N +++ A E I Y V + +M VR +
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVEL-----GLIEYAENV--FDEMSVRGV 213
Query: 104 SPNETTYRSMIRLFCDRN-RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
P+ ++Y+ M+ + C R+ +++EA L M ++G P + + I++ C+N + +A+
Sbjct: 214 VPDSSSYKLMV-IGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
+M+D G P++ + LI LC + + +A ++ +EM+ G P T+ L++
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
C +G K F L ++++ ++ P++ TY ++I G C + + A + M
Sbjct: 333 CKRGWTEKAFRLFLKLVRS-------DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
E L P+ +Y+ +I+G + +A+EL
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + ++NA + LC + + EA +L K + D VTY LI+ C+ +
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRL-------FCDRNRVEEAVGILRLMAEKG 137
+ R+ N+T + + +RL FC + +++E+ + +L+ G
Sbjct: 483 LAFFCRM--------------NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
L P ++Y+ +IS +CK ++ AL+ M G PD YG LI LC + + EA
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
L++ M+ RG+SP T TL YC + + + L + + +K
Sbjct: 589 KLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 111 RSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 170
R M+R F + R+ EAVG++ M +GL+P + + + ++ + + A + EM
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV 210
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
+G+ PD +Y L++ ++ EA M+ RG P T ++ A C G ++
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 231 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
++I G F P+L+ + +LI GLC +A E+L M P+
Sbjct: 271 AIWYFRKMIDLG--------FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 291 VSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+++A+I G + KAF L L++ + +T P
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 14/215 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHN 83
G E + N ++ C + K++E+E + + + P TY ++I C+ E + +
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK-EGDID 550
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ Y +H M P+ TY S+I C ++ V+EA + M ++GLSP
Sbjct: 551 LALKY------FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEV 604
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+ + +CK + A+ + +E LDK ++ + L++ LC ++++ A FQ++
Sbjct: 605 TRVTLAYEYCKRNDSANAMIL-LEPLDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKL 661
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
L + S T A G+ + V L + +
Sbjct: 662 LEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 696
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 25/290 (8%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+++ + +C G + A + +++ + PDCV Y T+I C +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF------- 428
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDR-NRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
Y ++ +P T +++ C R + +A + R M +GL +Y+ ++
Sbjct: 429 -QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ K ++ K E+ EM GI PDV Y +LI + + + EA ++ E++ RG P
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF--SPSLVTYNALIHGLCFFQ 269
+ ++ + +G+F + F L +Y+ P +VT +AL+HG C Q
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAF----------ILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
R ++A+ + + + L PD V Y+ +I G+ + ++ KA EL M Q+
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 23/320 (7%)
Query: 1 MKLLLRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM 60
+ L +R + W + + G G +V+F + +LC G L+EA +VL K+
Sbjct: 274 LSLFIRKYCSDGYFDKGWEL-LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 61 ----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRL 116
D V+ +++I C+ K ++L H L PN Y S +
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEA-------IKLIHSF---RLRPNIFVYSSFLSN 382
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
C + A I + + E GL P Y+ +I +C KA + +L G P
Sbjct: 383 ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
+ +LI + +A +F+ M G+ TY+ L+ Y + +KVF L D
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELID 502
Query: 237 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
E+ G SP + TYN LIH + DEA EI+ + P ++++ V
Sbjct: 503 EMRSAG--------ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 297 ISGFRRIRELRKAFELKLEM 316
I GF + + ++AF L M
Sbjct: 555 IGGFSKRGDFQEAFILWFYM 574
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 48 GKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
G + +AE+V M D VTYN L+ K H + ++ EL +M +
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLN----KVFELIDEMRSAGI 509
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
SP+ TY +I R ++EA I+ + +G P +++ +I F K + +A
Sbjct: 510 SPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFI 569
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ M D + PDV L+ C +R+ +A LF ++L G+ P Y+TL+ YC
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
G+ K L ++Q+G L P+ T++AL+ GL
Sbjct: 630 SVGDIEKACELIGLMVQRGML--------PNESTHHALVLGL 663
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M +G +A S I ++C + K E+ + M GI PD+ A+ + I LC
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF- 251
L EA + ++ L G+S + ++++ +C G+ +E I+ + SF
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK-------PEEAIK------LIHSFR 368
Query: 252 -SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
P++ Y++ + +C A I + + E+ L PD V Y+ +I G+ + KAF
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 311 E 311
+
Sbjct: 429 Q 429
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 25/290 (8%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+++ + +C G + A + +++ + PDCV Y T+I C +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF------- 428
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDR-NRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
Y ++ +P T +++ C R + +A + R M +GL +Y+ ++
Sbjct: 429 -QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ K ++ K E+ EM GI PDV Y +LI + + + EA ++ E++ RG P
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF--SPSLVTYNALIHGLCFFQ 269
+ ++ + +G+F + F L +Y+ P +VT +AL+HG C Q
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAF----------ILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
R ++A+ + + + L PD V Y+ +I G+ + ++ KA EL M Q+
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 23/320 (7%)
Query: 1 MKLLLRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM 60
+ L +R + W + + G G +V+F + +LC G L+EA +VL K+
Sbjct: 274 LSLFIRKYCSDGYFDKGWEL-LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 61 ----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRL 116
D V+ +++I C+ K ++L H L PN Y S +
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEA-------IKLIHSF---RLRPNIFVYSSFLSN 382
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
C + A I + + E GL P Y+ +I +C KA + +L G P
Sbjct: 383 ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
+ +LI + +A +F+ M G+ TY+ L+ Y + +KVF L D
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELID 502
Query: 237 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
E+ G SP + TYN LIH + DEA EI+ + P ++++ V
Sbjct: 503 EMRSAG--------ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 297 ISGFRRIRELRKAFELKLEM 316
I GF + + ++AF L M
Sbjct: 555 IGGFSKRGDFQEAFILWFYM 574
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 48 GKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
G + +AE+V M D VTYN L+ K H + ++ EL +M +
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLN----KVFELIDEMRSAGI 509
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
SP+ TY +I R ++EA I+ + +G P +++ +I F K + +A
Sbjct: 510 SPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFI 569
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ M D + PDV L+ C +R+ +A LF ++L G+ P Y+TL+ YC
Sbjct: 570 LWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
G+ K L ++Q+G L P+ T++AL+ GL
Sbjct: 630 SVGDIEKACELIGLMVQRGML--------PNESTHHALVLGL 663
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M +G +A S I ++C + K E+ + M GI PD+ A+ + I LC
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF- 251
L EA + ++ L G+S + ++++ +C G+ +E I+ + SF
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK-------PEEAIK------LIHSFR 368
Query: 252 -SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
P++ Y++ + +C A I + + E+ L PD V Y+ +I G+ + KAF
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 311 E 311
+
Sbjct: 429 Q 429
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 40/330 (12%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACE 77
+R +G +++N ++ LC +G +R A +LE M+ PD +TYNT+I+ +
Sbjct: 162 LRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 78 -----------AEKNHNPSIPYV-----------------RIVELYHQMCVRELSPNETT 109
++ N P++ R +E+ M V P+ T
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y S++ C R +EE +++ + GL + +Y+ ++ C ++ + E+ M
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
P V Y +LI LC R L A D F +ML + P TY+T++ G S
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL------GAMS 395
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 289
K + D + G L T P L+TYN++I GL +ALE+ M + + PD
Sbjct: 396 KEGMVDDAIELLGLLKN--TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 290 EVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+++ ++I GF R + +A ++ E +
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNR 483
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRI-VELYHQMCVRELSPNETTYRSMIRLFCDRN 121
PD +TYN +I C+ K H +R + L M + P+ TY ++IR D
Sbjct: 172 PDTITYNMIIGNLCK--KGH------IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYG 223
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
E+A+ + + G P +Y+ ++ C+ +A+E+ +M +G +PD+ Y
Sbjct: 224 NAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYN 283
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
L+ C + L E + Q +L G+ TY+TL+ + C + +V +E++
Sbjct: 284 SLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV----EEILN- 338
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
Y TS+ P+++TYN LI+GLC + A++ M E PD V+Y+ V+
Sbjct: 339 ---IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 302 RIRELRKAFELKLEMDQKETCWPLDQDTNESLV 334
+ + A EL + K TC P T S++
Sbjct: 396 KEGMVDDAIELLGLL--KNTCCPPGLITYNSVI 426
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 19/248 (7%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
I+ + G E V++N ++ LC E E +L M P +TYN LI C+
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK 361
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
A R ++ ++QM ++ P+ TY +++ V++A+ +L L+
Sbjct: 362 ARL-------LSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
P +Y+ +I K M KALE+ +MLD GIFPD LI C + EA
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
+ +E RG G TY +++ C K E + + ++ G P
Sbjct: 475 QVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG--------CKPDETI 526
Query: 258 YNALIHGL 265
Y A++ G+
Sbjct: 527 YTAIVKGV 534
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
+E T ++ C ++ +A ++ +MA PH S S ++ + ++ KA+ +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
M+ G PD Y ++I LC + + A L ++M L G P TY+T++
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G + + +Q G P+ ++TY L+ +C + A+E+L M
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPF--------MITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 286 LDPDEVSYSAVIS 298
PD V+Y+++++
Sbjct: 275 CYPDIVTYNSLVN 287
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 148/356 (41%), Gaps = 70/356 (19%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIP 87
AG ++N + LC G++ +A +L M PD V+YNTL+ + K
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGK------- 389
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+V L+ + ++ P+ TY ++I C+ +E A + M + + P +Y+
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY--------------------------- 180
++ F KN + A E+ EML KGI PD +AY
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 181 ---------GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
+ I LC L++A + +++ G+ P TY T++ Y G+F
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 232 FHLQDEVIQKGFLPYYVTSF---------------------------SPSLVTYNALIHG 264
+L DE+++K P +T F P+++T+NAL++G
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
+C DEA L M E + P++ SY+ +IS + + +L EM KE
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
N V+K L + +A AV E M + P +T+NT++ + +A R+ +
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE-------RVDK 259
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
++ +M R + +E TY +I F ++EEA M G + S++ +I +C
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
K A + EML+ GI+P Y + I LC R+ +AR+L M +P
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVV 375
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
+Y+TL+ Y G+F + L D+ ++ G PS+VTYN LI GLC +
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDD-LRAG-------DIHPSIVTYNTLIDGLCESGNLEG 427
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
A + M L+ PD ++Y+ ++ GF + L A E+ EM +K
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 38/322 (11%)
Query: 18 WNVPIRGFTAAGT------------EKGLV----SFNAVVKRLCGEGKLREAEAVLEKMT 61
+N+ I GF+ G G SFN +++ C +G +A V ++M
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 62 D----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
+ P TYN I A C+ + + EL M +P+ +Y +++ +
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDAR-------ELLSSMA----APDVVSYNTLMHGY 384
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
+ EA + + + P +Y+ +I C++ + A +K EM + IFPDV
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
Y L++ L A +++ EML +G+ P G Y T G+ K F L +E
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 238 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
++ +P L YN I GLC +A+E R + + L PD V+Y+ VI
Sbjct: 505 MVA-------TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 298 SGFRRIRELRKAFELKLEMDQK 319
G+ + + A L EM +K
Sbjct: 558 RGYLENGQFKMARNLYDEMLRK 579
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 55/323 (17%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
A +V++N ++ LC G L A+ + E+MT PD +TY TL+K KN
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV---KNG 458
Query: 83 NPSIPYVRIVELYHQM---------------CVREL---------------------SPN 106
N S+ E+Y +M V EL +P+
Sbjct: 459 NLSMA----TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 107 ETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 166
T Y I C + +A+ R + GL P +Y+ +I + +N + A +
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
EML K ++P V Y +LI RL +A EM RG+ P T++ L+ C G
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 286
+ + ++ ++G +P P+ +Y LI C F++ +E +++ + M + +
Sbjct: 635 NIDEAYRYLCKMEEEG-IP-------PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686
Query: 287 DPDEVSYSAVISGFRRIRELRKA 309
+PD ++ A+ + E R+
Sbjct: 687 EPDGYTHRALFKHLEKDHESREV 709
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
+ +M + P+ ++++ D + +A + M E G+ P +++ ++ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 155 NKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
++ + ++ +EM + I F +V Y +LI ++ EAR +M G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEV-TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
+++ L+E YC +G F + + DE++ G P+ TYN I LC F R D+
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIY--------PTTSTYNIYICALCDFGRIDD 361
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
A E+L M PD VSY+ ++ G+ ++ + +A
Sbjct: 362 ARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEA 393
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 19/302 (6%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVT----YNTLIKAACE 77
+R + G + +V++ +++K C +G + EAE V E + + V Y L+ C
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ + VR+ + ++ VR N T S+I +C ++ EA I M +
Sbjct: 344 TGQIRDA----VRVHDNMIEIGVR---TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
L P +Y+ ++ +C+ + +AL++ +M K + P V Y +L++ +
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
L++ ML RG++ + TL+EA G+F++ L + V+ +G L +T
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL--------TDTIT 508
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
N +I GLC ++ +EA EIL + P +Y A+ G+ ++ L++AF +K M+
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 318 QK 319
+K
Sbjct: 569 RK 570
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 21/287 (7%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV-RIV 92
N+++ C G+L EAE + +M D PD TYNTL+ C A YV +
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA--------GYVDEAL 421
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+L QMC +E+ P TY +++ + + + + ++M ++G++ S S ++
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
K + +A+++ +L +G+ D ++I LC ++ EA+++ + + P
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
+TY L Y G + F +++ + +KG P++ YN LI G ++ +
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIF--------PTIEMYNTLISGAFKYRHLN 593
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ +++ + L P +Y A+I+G+ I + KA+ EM +K
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 58/315 (18%)
Query: 48 GKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
G L+EA AV E M P YNTLI A + + ++ +L ++ R L
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN-------KVADLVIELRARGL 607
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
+P TY ++I +C+ +++A M EKG++ + + S+I + + ++ +A
Sbjct: 608 TPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACL 667
Query: 164 MKVEMLD--------------------------------------KGIFPDVHAYGLLIQ 185
+ +++D K + P+ Y + I
Sbjct: 668 LLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 186 LLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
LC +L +AR LF ++L P TY L+ + G+ +K F L+DE+ KG +
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Query: 245 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
P ++VTYNALI GLC D A +L +P+ + P+ ++Y+ +I G +
Sbjct: 788 P--------NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 305 ELRKAFELKLEMDQK 319
+ +A LK +M +K
Sbjct: 840 NVAEAMRLKEKMIEK 854
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 22/279 (7%)
Query: 40 VVKRLCGEGKLREAEAVLEKMTDP------DCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
VV C G + +A V K T+ + VTYN+LI + R++
Sbjct: 231 VVNAYCRSGNVDKA-MVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT----RVLR 285
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L M R +S N TY S+I+ +C + +EEA + L+ EK L Y ++ +C
Sbjct: 286 L---MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
+ ++ A+ + M++ G+ + LI C +L+EA +F M + P
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
TY+TLV+ YC G + L D++ QK + P+++TYN L+ G +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVV--------PTVMTYNILLKGYSRIGAFHD 454
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
L + + M + ++ DE+S S ++ ++ + +A +L
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 9/231 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILR-LMAEKGLSPHADSYSRIIS 150
+ +Y QM E+SP+ T ++ +C V++A+ + + GL + +Y+ +I+
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLIN 269
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+ ++ + M ++G+ +V Y LI+ C + + EA +F+ + + +
Sbjct: 270 GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA 329
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y L++ YC G+ + D +I+ G + N+LI+G C +
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGV--------RTNTTICNSLINGYCKSGQ 381
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
EA +I M + L PD +Y+ ++ G+ R + +A +L +M QKE
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILR-LMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
L PN Y I C ++E+A + L++ P +Y+ +I ++ KA
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
++ EM KGI P++ Y LI+ LC + A+ L ++ +G++P TY+TL++
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 222 YCLKGEFSKVFHLQDEVIQKGFL 244
G ++ L++++I+KG +
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLV 857
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 129/350 (36%), Gaps = 69/350 (19%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHN-------- 83
++N +V C G + EA + ++M P +TYN L+K H+
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 84 -------PSIPYVRIVE-------------LYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
I ++E L+ + R L + T MI C +V
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
EA IL + P +Y + + K + +A +K M KGIFP + Y L
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG- 242
I R L + DL E+ RG++P TY L+ +C G K + E+I+KG
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 243 ------------------------FLPYYVTSFSPSLVTYNALIHGL------CF-FQRP 271
L + F L Y +L L C Q+
Sbjct: 643 TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 702
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGF---RRIRELRKAFELKLEMDQ 318
E++E P+ LL P+ + Y+ I+G ++ + RK F L D+
Sbjct: 703 AESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR 750
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 12/144 (8%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+ +N + LC GKL +A + + PD TY LI C + N +
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIH-GCAIAGDINKAFT-- 776
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
L +M ++ + PN TY ++I+ C V+ A +L + +KG++P+A +Y+ +I
Sbjct: 777 ----LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 150 SRFCKNKEMGKALEMKVEMLDKGI 173
K+ + +A+ +K +M++KG+
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 58 EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRE-LSPNETTYRSMIRL 116
+K+ P+ + YN I C+A K + +L+ + + P+E TY +I
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDAR-------KLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
+ +A + MA KG+ P+ +Y+ +I CK + +A + ++ KGI P+
Sbjct: 765 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
Y LI L + EA L ++M+ +G+ G
Sbjct: 825 AITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 45/349 (12%)
Query: 1 MKLLLR-----VSSTVATLKTFWNVPIRG---------FTAA----GTEKGLVSFNAVVK 42
M++ LR V +V +L T NV I+ F + G + + N +VK
Sbjct: 140 MRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVK 199
Query: 43 RLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQM 98
LC + + A VL+++ P+ VTY T++ + R++E +M
Sbjct: 200 ALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK----RVLE---EM 252
Query: 99 CVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 158
R P+ TTY ++ +C R EA ++ M + + P+ +Y +I CK K+
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 159 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 218
G+A M EML++ PD +I LC ++ EA L+++ML P TL
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 219 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 278
+ C +G ++ L DE +KG + PSL+TYN LI G+C EA +
Sbjct: 373 IHWLCKEGRVTEARKLFDE-FEKGSI--------PSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 279 RGMPEMLLDPDEVSYSAVISGFRR---IRELRKAFELKLEMDQKETCWP 324
M E P+ +Y+ +I G + ++E + E LE+ C+P
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG----CFP 468
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
++ ++ C G+ EA V++ M +P+ VTY +I+A C+ +K+
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR----- 316
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
++ +M R P+ + +I C+ ++V+EA G+ R M + P S +I
Sbjct: 317 --NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
CK + +A ++ E +KG P + Y LI +C + L EA L+ +M R P
Sbjct: 375 WLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY+ L+E G + + +E+++ G P+ T+ L GL +
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF--------PNKTTFLILFEGLQKLGK 485
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGF 300
++A++I+ M M D+ S+ + F
Sbjct: 486 EEDAMKIV-SMAVMNGKVDKESWELFLKKF 514
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 48/296 (16%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE------ 77
AG L ++N V+ L G ++E VL +M D P+ +TY +L+ A
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 78 ----AEKNHNPSI-PYVRIVELYHQMCV-----------------RELSPNETTYRSMIR 115
AE+ ++ I P +++ +C R SP+ TT SM+
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
++ R V +A G+L M E+G +P +Y+ ++ ++ + GK+ E+ E+L KGI P
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
D+ +Y +I C R+ +A +F EM G+ P TY+T + +Y F + +
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPEMLLDP 288
+I+ G P+ TYN+++ G C R DEA +E LR LDP
Sbjct: 758 RYMIKHG--------CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN-----LDP 800
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 138/293 (47%), Gaps = 20/293 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGK-LREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHN 83
G + L+++N ++ G + +++EKM PD TYNTLI C+ H
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQ 296
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ +++ +M S ++ TY +++ ++ +R +EA+ +L M G SP
Sbjct: 297 EA------AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ +IS + ++ + +A+E+K +M +KG PDV Y L+ ++ A +F+EM
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G P T++ ++ Y +G+F+++ + DE+ V SP +VT+N L+
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI--------NVCGLSPDIVTWNTLLA 462
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
E + + M P+ +++ +IS + R +A + M
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNH 82
AAG V++NA++ + +EA VL +M P VTYN+LI A
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA-------- 358
Query: 83 NPSIPYVR------IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
Y R +EL +QM + P+ TY +++ F +VE A+ I M
Sbjct: 359 -----YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
G P+ +++ I + + + +++ E+ G+ PD+ + L+ + E
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 197 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 256
+F+EM G P T++TL+ AY G F + + ++ G +P L
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG--------VTPDLS 525
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
TYN ++ L +++ ++L M + P+E++Y +++ + +E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 54/328 (16%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
AG + + +FNA +K GK E + +++ PD VT+NTL+ A + +
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL--AVFGQNGMD 470
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ V + +M P T+ ++I + E+A+ + R M + G++P
Sbjct: 471 SEVSGV-----FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD-------VHAY------GLL------- 183
+Y+ +++ + ++ ++ EM D P+ +HAY GL+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 184 --------------IQLLCHQRRLL-EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+ L+C + LL EA F E+ RG SP T +++V Y +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
+K + D + ++G F+PS+ TYN+L++ ++ EILR + + P
Sbjct: 646 AKANGVLDYMKERG--------FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEM 316
D +SY+ VI + R +R A + EM
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
+I + RV A + + E G S SY+ +IS F + +A+ + +M + G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 173 IFPDVHAYGLLIQLLCHQRRLL-EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
P + Y +++ + + L ++M G++P TY+TL+ C +G
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGS---- 293
Query: 232 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 291
L E Q F FS VTYNAL+ RP EA+++L M P V
Sbjct: 294 --LHQEAAQV-FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 292 SYSAVISGFRRIRELRKAFELKLEMDQKET 321
+Y+++IS + R L +A ELK +M +K T
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
+R A G + ++S+N V+ C ++R+A + +M + PD +TYNT I +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI-GSYA 745
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE-- 135
A+ +I VR M PN+ TY S++ +C NR +EA +L E
Sbjct: 746 ADSMFEEAIGVVRY------MIKHGCRPNQNTYNSIVDGYCKLNRKDEA----KLFVEDL 795
Query: 136 KGLSPHA 142
+ L PHA
Sbjct: 796 RNLDPHA 802
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 135/307 (43%), Gaps = 33/307 (10%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA-----EKNHNPS 85
V++N V+ LC G EA L +M PD V+YNTLI C+ K
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 86 IPYVRIV----------------ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGI 129
I + ++ E Y M + P+ T+ S+I C +V E +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 130 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 189
LR M E + P+ +Y+ ++ K AL + +M+ +GI D+ Y +L+ L
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 190 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
L EA F+ +L P TY LV+ C G+ S + ++++K
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK-------- 393
Query: 250 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
S P++VTY+++I+G +EA+ +LR M + + P+ +Y VI G + + A
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 310 FELKLEM 316
EL EM
Sbjct: 454 IELSKEM 460
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEA----VLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G LV + ++ L G LREAE +LE P+ VTY L+ C+A +
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ QM + + PN TY SMI + + +EEAV +LR M ++ + P+ +
Sbjct: 384 EF-------IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y +I K + A+E+ EM G+ + + L+ L R+ E + L ++M+
Sbjct: 437 YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV 496
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G++ Y +L++ + G+ +E+ ++G +P+ V V+YN LI G
Sbjct: 497 SKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG-MPWDV-------VSYNVLISG 548
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ F + A +GM E ++PD +++ +++ R+
Sbjct: 549 MLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR-I 91
+N ++ LC G ++A V+ M PD VT+N+L+ +VR
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS--------HVRKA 732
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ Y M +SPN TY ++IR D ++E L M +G+ P +Y+ +IS
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
K M ++ + EM+ G+ P Y +LI + ++L+AR+L +EM RG+SP
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Query: 212 GRTYDTLVEAYC 223
TY T++ C
Sbjct: 853 TSTYCTMISGLC 864
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 142/319 (44%), Gaps = 24/319 (7%)
Query: 14 LKTFWNV-----PIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PD 64
L +++N+ R +G + +V+F++++ RLC GK+ E +L +M + P+
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 65 CVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVE 124
VTY TL+ + +A Y + LY QM VR + + Y ++ +
Sbjct: 294 HVTYTTLVDSLFKAN-------IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 346
Query: 125 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 184
EA +++ E P+ +Y+ ++ CK ++ A + +ML+K + P+V Y +I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 185 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
+ L EA L ++M + + P G TY T+++ G+ L E+ G
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG-- 464
Query: 245 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
+ +AL++ L R E +++ M + D+++Y+++I F +
Sbjct: 465 ------VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Query: 305 ELRKAFELKLEMDQKETCW 323
+ A EM ++ W
Sbjct: 519 DEEAALAWAEEMQERGMPW 537
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 19/278 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNH 82
+ G + L+S N VV LC GK+ EA +L +M P+ TY + + + ++
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 660
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
I + + + + + Y ++I C ++A ++ M +G P
Sbjct: 661 -------AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+++ ++ + + KAL M++ GI P+V Y +I+ L + E E
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M RGM P TY+ L+ G + E+I G + P TYN LI
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV--------PKTSTYNVLI 825
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+ +A E+L+ M + + P+ +Y +ISG
Sbjct: 826 SEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 18/286 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEA---VLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+VS+N ++ + GK+ A + EK +PD T+N ++ + + +
Sbjct: 539 VVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG------- 591
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
I++L+ +M + P+ + ++ + C+ ++EEA+ IL M + P+ +Y +
Sbjct: 592 ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
K+K + +L GI Y LI LC +A + +M RG P
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
T+++L+ Y + K +++ G SP++ TYN +I GL
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG--------ISPNVATYNTIIRGLSDAGL 763
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
E + L M + PD+ +Y+A+ISG +I ++ + + EM
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 809
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 42/322 (13%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVL-EKMTDPDCVTYNTLIKAACE---AEKNH 82
A G + + N ++ C G+L A ++L ++ D VTYNT+I CE A++ +
Sbjct: 122 ACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAY 181
Query: 83 N------------PSIPYVRIVELY--------HQMCVRELSP-NETTYRSMIRLFCDRN 121
++ Y +++ + + V E+S N T+ ++ + + +
Sbjct: 182 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLH 241
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV---EMLDKGIFPDVH 178
+EEA R M G P ++S II+R CK GK LE + EM + ++P+
Sbjct: 242 AIEEA---YRDMVMSGFDPDVVTFSSIINRLCKG---GKVLEGGLLLREMEEMSVYPNHV 295
Query: 179 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
Y L+ L A L+ +M++RG+ Y L++ G+ +
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA------- 348
Query: 239 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+K F + P++VTY AL+ GLC A I+ M E + P+ V+YS++I+
Sbjct: 349 -EKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 299 GFRRIRELRKAFELKLEMDQKE 320
G+ + L +A L +M+ +
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQN 429
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 24/240 (10%)
Query: 98 MCVRELSPNETTYRSMIRLFCDRNRVEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNK 156
MC + P+ + S+I F V + V I M G+SP + + +I FCK
Sbjct: 84 MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 143
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 216
+ A+ + + ++ I D Y +I LC EA EM+ G+ P +Y+
Sbjct: 144 RLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYN 200
Query: 217 TLVEAYCLKGEFSKVFHLQDEV--------------------IQKGFLPYYVTSFSPSLV 256
TL++ +C G F + L DE+ I++ + ++ F P +V
Sbjct: 201 TLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVV 260
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
T++++I+ LC + E +LR M EM + P+ V+Y+ ++ + R A L +M
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 172 GIFPDVHAYGLLIQL-----LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
G+ PD + LI L H + L ++ +M+ G+SP + L+ ++C G
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSL----IYSKMIACGVSPDVFALNVLIHSFCKVG 143
Query: 227 EFS-KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
S + L++ VI S VTYN +I GLC DEA + L M +M
Sbjct: 144 RLSFAISLLRNRVI------------SIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+ PD VSY+ +I GF ++ +A L E+ +
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 18/288 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E V+ + V+ LC G++ EA+ +++++T+ PD TYN L+K C+ + H
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH-- 211
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ Y + E+ V+ P+ ++ +I C+ + EA+ ++ + G P
Sbjct: 212 -VVYEFVDEMRDDFDVK---PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ I+ FC + +A+ + +M ++G+ PD Y LI L R+ EAR + M+
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G P TY +L+ C KGE L +E+ +G +P+ TYN L+HG
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG--------CAPNDCTYNTLLHG 379
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
LC + D+ +E+ M + + Y+ ++ + ++ +A+E+
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 15/265 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P T+ L+ AC A P + + + M L P++ T +R C+ R
Sbjct: 120 PGRSTFLILLSHACRA-----PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYG 181
V+EA +++ + EK P +Y+ ++ CK K++ E EM D + PD+ ++
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+LI +C+ + L EA L ++ G P Y+T+++ +C + S+ + ++ ++
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
G P +TYN LI GL R +EA L+ M + +PD +Y+++++G
Sbjct: 295 GV--------EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 302 RIRELRKAFELKLEMDQKETCWPLD 326
R E A L EM+ + C P D
Sbjct: 347 RKGESLGALSLLEEMEAR-GCAPND 370
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
LVSF ++ +C LREA ++ K+ + PDC YNT++K C K
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS------- 282
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
V +Y +M + P++ TY ++I RVEEA L+ M + G P +Y+ ++
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ C+ E AL + EM +G P+ Y L+ LC R + + +L++ M G+
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
Y TLV + G+ ++ + + D + L
Sbjct: 403 LESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSL 437
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +++N ++ L G++ EA L+ M D PD TY +L+ C ++
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES--- 351
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + L +M R +PN+ TY +++ C +++ + + +M G+ ++
Sbjct: 352 ----LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
Y+ ++ K+ ++ +A E+ +D D AY L
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 18/273 (6%)
Query: 51 REAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPN 106
+ A V+ MT + V Y T+I C+ + ++E ++CV +S
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE-EKRLCVSCMS-- 586
Query: 107 ETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 166
Y S+I F ++ AV M G+SP+ +Y+ +++ CKN M +ALEM+
Sbjct: 587 ---YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
EM +KG+ D+ AYG LI C + + A LF E+L G++P Y++L+ + G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 286
L ++++ G L TY LI GL A E+ M + L
Sbjct: 704 NMVAALDLYKKMLKDG--------LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 287 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
PDE+ Y+ +++G + + K ++ EM +
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 46/250 (18%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+S+N+++ EG++ A A E+M P+ +TY +L+ C+ + +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD-------Q 637
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+E+ +M + + + Y ++I FC R+ +E A + + E+GL+P Y+ +IS
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
F M AL++ +ML G+ D+ Y LI L L+ A +L+ EM G+ P
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP 757
Query: 211 GGRTYDTLVEAYCLKGEFSKV-----------------------------------FHLQ 235
Y +V KG+F KV F L
Sbjct: 758 DEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLH 817
Query: 236 DEVIQKGFLP 245
DE++ KG LP
Sbjct: 818 DEMLDKGILP 827
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 137/320 (42%), Gaps = 40/320 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G V+F+ +++ G++ +A +KM P +T+I+ + +K+
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE-- 426
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++L+ + L+ N +++ C + + +EA +L M +G+ P+ S
Sbjct: 427 -----EALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++ C+ K M A + +L+KG+ P+ + Y +LI A ++ M
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ--------------------KGFL 244
+ G Y T++ C G+ SK L +I+ +G +
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEM 600
Query: 245 PYYVTSF--------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
V ++ SP+++TY +L++GLC R D+ALE+ M + D +Y A+
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 297 ISGFRRIRELRKAFELKLEM 316
I GF + + A L E+
Sbjct: 661 IDGFCKRSNMESASALFSEL 680
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 19/286 (6%)
Query: 39 AVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQM 98
A VK+ + +R + +L + V +LI C KN++ V + L+ +M
Sbjct: 313 ASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC---KNND----LVSALVLFDKM 365
Query: 99 CVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 158
SPN T+ +I F +E+A+ + M GL+P II + K ++
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 159 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 218
+AL++ E + G+ +V ++ LC Q + EA +L +M RG+ P +Y+ +
Sbjct: 426 EEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 219 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE-ALEI 277
+ +C + + +++KG P+ TY+ LI G CF ++ ALE+
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGL--------KPNNYTYSILIDG-CFRNHDEQNALEV 535
Query: 278 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM-DQKETC 322
+ M ++ + V Y +I+G ++ + KA EL M ++K C
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 132/285 (46%), Gaps = 26/285 (9%)
Query: 35 VSFNAVVKRLCGEGKLRE---AEAV------LEKMTDPDCVTYNTLIKAACEAEKNHNPS 85
V + V +L LRE AEA+ +E+ +PD + Y+ ++A C+ +
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCK-------T 281
Query: 86 IPYVRIVELYHQMCVRELS-PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ L +M ++L P++ TY S+I + +++A+ + M G+S + +
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+ +I+ CKN ++ AL + +M +G P+ + +LI+ + +A + +++M
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+ G++P T+++ + + + L DE + G +V N ++
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC---------NTILSW 452
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
LC + DEA E+L M + P+ VSY+ V+ G R + + A
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V++ +QM ++ P + RN + EA + M G+ + ++
Sbjct: 183 VDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRA 242
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS-P 210
+ ++ +ALE+ +++G PD Y L +Q C L A L +EM + + P
Sbjct: 243 SLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVP 302
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY +++ A +G L+DE++ G S ++V +LI G C
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDG--------ISMNVVAATSLITGHCKNND 354
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
AL + M + P+ V++S +I FR+ E+ KA E +M+
Sbjct: 355 LVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 11/197 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAV----LEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G + + ++ A++ C + A A+ LE+ +P YN+LI
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN---- 704
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
V ++LY +M L + TY ++I + A + M GL P
Sbjct: 705 ---MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ I++ K + K ++M EM + P+V Y +I + L EA L EML
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 205 LRGMSPGGRTYDTLVEA 221
+G+ P G T+D LV
Sbjct: 822 DKGILPDGATFDILVSG 838
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 41/322 (12%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYVR 90
++F +++ L G++ +A V EKM D DC + Y +LIK + + Y
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 91 IVE----------------------------LYHQMCVRELSPNETTYRSMIRLFCDRNR 122
++ ++ ++ R P+ +Y +I
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
E + M E+G +Y+ +I FCK ++ KA ++ EM KG P V YG
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+I L RL EA LF+E + + Y +L++ + G + + + +E++QKG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+P+L T+N+L+ L + +EAL + M E+ P++V+Y +I+G +
Sbjct: 688 --------LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 303 IRELRKAFELKLEMDQKETCWP 324
+R+ KAF EM QK+ P
Sbjct: 740 VRKFNKAFVFWQEM-QKQGMKP 760
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 19/296 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
AG + + N +V RLC KL EA A+ E+M PD +T+ +LI + + +
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++Y +M + N Y S+I+ F + R E+ I + M + SP
Sbjct: 466 A-------YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+ + K E K M E+ + PD +Y +LI L E +LF M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+G R Y+ +++ +C G+ +K + L +E+ KG F P++VTY ++I
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG--------FEPTVVTYGSVID 630
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
GL R DEA + ++ + V YS++I GF ++ + +A+ + E+ QK
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 31 EKGLV----SFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNH 82
E+G V ++N V+ C GK+ +A +LE+M +P VTY ++I + ++
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ L+ + + + N Y S+I F R++EA IL + +KGL+P+
Sbjct: 640 EAYM-------LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+++ ++ K +E+ +AL M + P+ YG+LI LC R+ +A +QE
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M +GM P +Y T++ G ++ L D G + P YNA+I
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV--------PDSACYNAMI 804
Query: 263 HGLCFFQRPDEALEIL-----RGMP 282
GL R +A + RG+P
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLP 829
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 18/296 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM---TDPDCVTYNTLIKAACEAEKNHN 83
A G+ ++++N ++ L GK+ EA V E+M P+ TYN LI C A K
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
EL M L PN T M+ C +++EA + M K +P
Sbjct: 396 A-------FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
++ +I K + A ++ +MLD + Y LI+ + R + ++++M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ + SP + +T ++ GE K + +E+ + F+ P +Y+ LIH
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV--------PDARSYSILIH 560
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
GL +E E+ M E D +Y+ VI GF + ++ KA++L EM K
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 24/296 (8%)
Query: 36 SFNAVVKRLCG---EGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPY 88
S N ++ + G KLRE V++ M P Y TLI A + NH+
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF--SAVNHSD---- 185
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
++ L+ QM P + ++IR F RV+ A+ +L M L Y+
Sbjct: 186 -MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I F K ++ A + E+ G+ PD Y +I +LC RL EA ++F+ +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P Y+T++ Y G+F + + L + KG + PS++ YN ++ L
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI--------PSVIAYNCILTCLRKM 356
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+ DEAL++ M + P+ +Y+ +I R +L AFEL+ M QK +P
Sbjct: 357 GKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSM-QKAGLFP 410
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 19/281 (6%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRI 91
S++ ++ L G E + M + CV YN +I C+ K + +
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN-------KA 606
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+L +M + P TY S+I +R++EA + K + + YS +I
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
F K + +A + E++ KG+ P+++ + L+ L + EA FQ M +P
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY L+ C +F+K F E+ ++G PS ++Y +I GL
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGM--------KPSTISYTTMISGLAKAGNI 778
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
EA + PD Y+A+I G AF L
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 115/267 (43%), Gaps = 20/267 (7%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
A G + V++ +++ LC +L EA + E + P YNT+I A K
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK-- 323
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ L + + P+ Y ++ +V+EA+ + M +K +P+
Sbjct: 324 -----FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNL 377
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ +I C+ ++ A E++ M G+FP+V +++ LC ++L EA +F+E
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M + +P T+ +L++ G + + ++++ + + + Y +LI
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD--------SDCRTNSIVYTSLI 489
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPD 289
R ++ +I + M PD
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPD 516
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSI 86
E +V +++++ G++ EA +LE++ P+ T+N+L+ A +AE+ + +
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
+ + EL + +PN+ TY +I C + +A + M ++G+ P SY+
Sbjct: 714 CFQSMKEL-------KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
+IS K + +A + G PD Y +I+ L + R ++A LF+E R
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 207 GMSPGGRT----YDTLVEAYCLK 225
G+ +T DTL + CL+
Sbjct: 827 GLPIHNKTCVVLLDTLHKNDCLE 849
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 29/312 (9%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN ++ C + EA + + M +PD VTYNT+I C A K
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK----------- 259
Query: 92 VELYHQMC------VRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
V++ H + ++ PN +Y +++R +C + ++EAV + M +GL P+A +Y
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 146 SRIISRFCKNKEMGKALEMKVEMLD--KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+ +I + + ++ + D PD + +LI+ C L A +FQEM
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
L + P +Y L+ C++ EF + L +E+ +K L P YN +
Sbjct: 380 LNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL-LGKDECKPLAAAYNPMFE 438
Query: 264 GLCFFQRPDEALEILRG-MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
LC + +A ++ R M + DP SY +I+G R + + A+EL + M ++E
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQDPP--SYKTLITGHCREGKFKPAYELLVLMLRRE-- 494
Query: 323 WPLDQDTNESLV 334
+ D +T E L+
Sbjct: 495 FVPDLETYELLI 506
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 31/287 (10%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAV----LEKMTD--PDCVTYNTLIKAACEAEKNHNPSIP 87
+V++N ++ LC GK++ A V L+K TD P+ V+Y TL++ C ++
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA--- 300
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGIL--RLMAEKGLSPHADSY 145
V ++H M R L PN TY ++I+ + +R +E IL A +P A ++
Sbjct: 301 ----VLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+ +I C + A+++ EML+ + PD +Y +LI+ LC + A LF E+
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 206 RGM-------SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
+ + P Y+ + E C G+ + + +++++G PS Y
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG------VQDPPS---Y 467
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 305
LI G C + A E+L M PD +Y +I G +I E
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGE 514
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 138/314 (43%), Gaps = 25/314 (7%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
A +VS+ +V+ C + ++ EA V M P+ VTYNTLIK EA +
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD 333
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
++ + + +P+ T+ +I+ CD ++ A+ + + M L P +
Sbjct: 334 E-----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 388
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIF-------PDVHAYGLLIQLLCHQRRLLE 195
SYS +I C E +A + E+ +K + P AY + + LC + +
Sbjct: 389 ASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQ 448
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A +F++++ RG+ +Y TL+ +C +G+F + L ++++ F+P L
Sbjct: 449 AEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAYELLVLMLRREFVP--------DL 499
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
TY LI GL A + L+ M P ++ +V++ + + ++F L
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL 559
Query: 316 MDQKETCWPLDQDT 329
M +K +D T
Sbjct: 560 MLEKRIRQNIDLST 573
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 108/222 (48%), Gaps = 10/222 (4%)
Query: 80 KNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLS 139
+N N + ++ +E CV+ + + S+IR + + +E+V + + M + G+S
Sbjct: 114 RNLNVARNFLFSIERRSNGCVK---LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 140 PHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARD 198
P +++ ++S K G A ++ EM G+ PD + + LI C + EA
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFR 230
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
+F++M L +P TY+T+++ C G+ ++ +++K T P++V+Y
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA------TDVHPNVVSY 284
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
L+ G C Q DEA+ + M L P+ V+Y+ +I G
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 254
E+ LFQ M G+SP T+++L+ +G L DE+ + Y VT P
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR----TYGVT---PD 208
Query: 255 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 314
T+N LI+G C DEA I + M +PD V+Y+ +I G R +++ A +
Sbjct: 209 SYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLS 268
Query: 315 EMDQKET 321
M +K T
Sbjct: 269 GMLKKAT 275
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD---PDCVTYNTLIKAACEAEKNHNPS------ 85
++N + + LC GK ++AE V ++ D +Y TLI C E P+
Sbjct: 431 AAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCR-EGKFKPAYELLVL 489
Query: 86 ------IPYVRIVELY-------------HQMCVRELS----PNETTYRSMIRLFCDRNR 122
+P + EL H R L P TT+ S++ R
Sbjct: 490 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 549
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
E+ ++ LM EK + + D ++++ + + KA + + D G +
Sbjct: 550 ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEE--- 606
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L+ LC R+LL+A L L + T +T++E C S+ F L +E+++ G
Sbjct: 607 LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 23/293 (7%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHN 83
+G GL++ N ++ LC G + +A+ ++ +M + P+CV+YNTLIK C
Sbjct: 150 SGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN--- 206
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILR---LMAEKGLSP 140
+ + L++ M + PN T ++ C + + L L + + +P
Sbjct: 207 ----VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAP 262
Query: 141 HADSYSRIISRFC-KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 199
I+ C KN + +ALE+ EM K + D Y ++I+ LC ++ A
Sbjct: 263 LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF 322
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 259
+M+ RG++P TY+TL+ A C +G+F + L + G +P ++Y
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG--------VAPDQISYK 374
Query: 260 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+I GLC + A E L M + L P+ + ++ VI G+ R + A +
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 19/280 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V +N +++ LC G + A + M +PD TYNTLI A C+ K +
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK-------FDE 353
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+L+ M ++P++ +Y+ +I+ C V A L M + L P ++ +I
Sbjct: 354 ACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+ + + AL + ML G+ P+V+ LI RL++A + EM + P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY+ L+ A C G F L DE++++G P ++TY L+ GLC+ R
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC--------QPDIITYTELVRGLCWKGR 525
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
+A +L + + D V + + + R++ +A+
Sbjct: 526 LKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 141/339 (41%), Gaps = 45/339 (13%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
+R G VS+N ++K LC + +A + M P+ VT N ++ A C+
Sbjct: 179 VREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
Query: 78 AE--KNHNPSI------------------------------PYVRIVELYHQMCVRELSP 105
N+N + V+ +E++ +M + +
Sbjct: 239 KGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPA 298
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
+ Y +IR C + A G + M ++G++P +Y+ +IS CK + +A ++
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
M + G+ PD +Y ++IQ LC + A + ML + P ++ +++ Y
Sbjct: 359 GTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRY 418
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G+ S + + ++ G P++ T NALIHG R +A + M
Sbjct: 419 GDTSSALSVLNLMLSYG--------VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+ PD +Y+ ++ + LR AF+L EM + C P
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEM-LRRGCQP 508
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 47/258 (18%)
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L +M + P T+ ++ C +E+A G++R M E G SP+ SY+ +I C
Sbjct: 143 LRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLC 202
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ-------RRLLE----------- 195
+ KAL + M GI P+ +++ LC + ++LLE
Sbjct: 203 SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAP 262
Query: 196 ---------------------ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
A ++++EM + + Y+ ++ C G +
Sbjct: 263 LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF 322
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
+++++G +P + TYN LI LC + DEA ++ M + PD++SY
Sbjct: 323 MCDMVKRG--------VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 295 AVISGFRRIRELRKAFEL 312
+I G ++ +A E
Sbjct: 375 VIIQGLCIHGDVNRANEF 392
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
+ + S++R C + +++ A+ + + M G+ P +++ +++ CK + KA + E
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 227
M + G P+ +Y LI+ LC + +A LF M G+ P T + +V A C KG
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 228 F-SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEILRGMPEML 285
+ L +E++ + +P + ++ CF +ALE+ + M +
Sbjct: 242 IGNNNKKLLEEILDSS------QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKN 295
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+ D V Y+ +I G + A+ +M
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 40/299 (13%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKA------ACEAEKN------ 81
N +V+ C + K+ EA ++ KM PD VT+NTL KA C AE
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 82 HNPSIPYVRI-----------------VELYHQMCVRELSPNETTYRSMIRLFCDRNRVE 124
HN P VR + +++M + PN + S+I+ F + N ++
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 125 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 184
++ LM E G+ P ++S +++ + +M + E+ +ML+ GI PD+HA+ +L
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 185 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
+ +A + +M G+ P Y ++ +C GE K + ++
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG---- 699
Query: 245 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
+ SP+L TY LI G ++P +A E+L+ M + P + + G++ I
Sbjct: 700 ---IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSI 755
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 42/322 (13%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNP 84
G + + FNA++ G L +A + EKM + C T+NTLIK + K
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 85 SIPYVRIVELYHQMCVRE--LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
S R+++ M +R+ L PN+ T +++ +C++ ++EEA I+ M G+ P
Sbjct: 444 S----RLLD----MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 143 DSYSRIISRFCKNKEMGKALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+++ + + + A +M + ML + P+V G ++ C + ++ EA F
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------ 249
M G+ P +++L++ + + V + D + + G P VT
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 250 ---------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
P + ++ L G P++A +IL M + + P+ V Y+
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 295 AVISGFRRIRELRKAFELKLEM 316
+ISG+ E++KA ++ +M
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKM 697
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 143/305 (46%), Gaps = 24/305 (7%)
Query: 14 LKTFWNVPIRGFTAAGTEKGLVSF-NAVVKRLCGEGKLREAEAV----LEKMTDPDCVTY 68
L++F V G T G + N +++R G+ +EA ++ +E+ P +TY
Sbjct: 302 LRSFPCVICSGGTTCGDVRSRTKLMNGLIER----GRPQEAHSIFNTLIEEGHKPSLITY 357
Query: 69 NTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVG 128
TL+ A + H+ ++ L ++ L P+ + ++I + +++A+
Sbjct: 358 TTLVTALTRQKHFHS-------LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 129 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLL 187
I M E G P A +++ +I + K ++ ++ + ML D+ + P+ +L+Q
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 188 CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY 247
C+QR++ EA ++ +M G+ P T++TL +AY G +D +I +
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA---EDMIIPR----ML 523
Query: 248 VTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELR 307
P++ T +++G C + +EAL M E+ + P+ ++++I GF I ++
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 308 KAFEL 312
E+
Sbjct: 584 GVGEV 588
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
DV + L+ L + R EA +F ++ G P TY TLV A + F + L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
+V + G P + +NA+I+ D+A++I M E P +++
Sbjct: 378 SKVEKNGL--------KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNT 429
Query: 296 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 330
+I G+ +I +L ++ L M + E P D+ N
Sbjct: 430 LIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN 464
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 137/331 (41%), Gaps = 38/331 (11%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
G +FN + C + RE + LEKM +PD VTYNTL+ + C +
Sbjct: 230 VGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR--- 286
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
LY M R + P+ TY S+I+ C RV EA M ++G+ P
Sbjct: 287 ----LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
SY+ +I +CK M ++ ++ EML + PD ++++ + RLL A + E+
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ D L+ + C +G+ HL D +I++ TYN LI
Sbjct: 403 RRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE-------EGHEAKPETYNNLIE 455
Query: 264 GLCFFQRPDEALEI---LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
L +EAL + L+ ++L D +Y A+I RI R+A L EM E
Sbjct: 456 SLSRCDAIEEALVLKGKLKNQNQVL---DAKTYRALIGCLCRIGRNREAESLMAEMFDSE 512
Query: 321 T--------------CWPLDQDTNESLVKDF 337
C LD D E L+ F
Sbjct: 513 VKPDSFICGALVYGYCKELDFDKAERLLSLF 543
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
++Y MC + PN T+ + +FC+ + E L M E+G P +Y+ ++S +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ + +A + M + + PD+ Y LI+ LC R+ EA F M+ RG+ P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
+Y+TL+ AYC +G + L E++ +P
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP 374
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 8/194 (4%)
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
VEE + R + + G S + + +++ K M ++ M GI P+ + + +
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L + C+ E D ++M G P TY+TLV +YC +G + F+L
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL-------- 293
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ Y P LVTY +LI GLC R EA + M + + PD +SY+ +I + +
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 303 IRELRKAFELKLEM 316
++++ +L EM
Sbjct: 354 EGMMQQSKKLLHEM 367
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 107/273 (39%), Gaps = 55/273 (20%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
LV++ +++K LC +G++REA +M D PDC++YNTLI A C+
Sbjct: 306 LVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK---- 361
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGIL------------------- 130
+L H+M + P+ T + ++ F R+ AV +
Sbjct: 362 ---KLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Query: 131 -----------------RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
R++ E+G ++Y+ +I + + +AL +K ++ ++
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQ 478
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
D Y LI LC R EA L EM + P LV YC + +F K
Sbjct: 479 VLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAER 538
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
L F P +YN+L+ +C
Sbjct: 539 LL------SLFAMEFRIFDPE--SYNSLVKAVC 563
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 21/287 (7%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
NA++K G + E V KM +P TYN L+ N S +V E
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLM--------NGLVSAMFVDSAE 242
Query: 94 -LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
++ M + P+ TY +MI+ +C + ++A+ LR M +G +Y +I
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
+ + G + + EM +KGI HA+ L+I LC + +L E +F+ M+ +G P
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
Y L++ Y G L +I +G F P +VTY+ +++GLC R +
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEG--------FKPDVVTYSVVVNGLCKNGRVE 414
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
EAL+ L + + YS++I G + + +A L EM +K
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 144/351 (41%), Gaps = 51/351 (14%)
Query: 5 LRVSSTVATLKTFWNVPI--------RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAV 56
+ VS+ A +K+F + + R G E L ++N ++ L + AE V
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 57 LEKMTD----PDCVTYNTLIKAACEAEKNHNP---------------SIPYVRIVE---- 93
E M PD VTYNT+IK C+A + I Y+ +++
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 94 ---------LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
LY +M + + + +I C ++ E + M KG P+
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I + K+ + A+ + M+D+G PDV Y +++ LC R+ EA D F
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G++ Y +L++ G + L +E+ +KG + YNALI
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG--------CTRDSYCYNALIDA 476
Query: 265 LCFFQRPDEALEILRGM-PEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 314
++ DEA+ + + M E D +Y+ ++SG +E R LKL
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM--FKEHRNEEALKL 525
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 131/293 (44%), Gaps = 29/293 (9%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G++ + + ++ G + +A +L +M D PD VTY+ ++ C+ +
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ +H L+ N Y S+I RV+EA + M+EKG + +
Sbjct: 417 -------LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
Y+ +I F K++++ +A+ + M ++ G V+ Y +L+ + + R EA L+ M
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA--- 260
+ +G++P + L CL G+ ++ + DE+ +P V +A
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKILDEL-------------APMGVILDAACE 576
Query: 261 -LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+I+ LC R EA ++ G+ E + + +I+ R++ + A +L
Sbjct: 577 DMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 33/312 (10%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V+++ + C G+L+ A M P+ VT+ LI C+A
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA----- 217
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
V LY +M +S N TY ++I FC + ++ A + M E + P++ Y+ II
Sbjct: 218 --VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
F + + A++ +ML++G+ D+ AYG++I LC +L EA ++ ++M +
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP----------------------YY 247
P + T++ AY G ++ ++I++GF P Y
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Query: 248 VTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELR 307
+ V Y LI LC E + + E L PD+ Y++ I+G + L
Sbjct: 396 FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 308 KAFELKLEMDQK 319
AF+LK M Q+
Sbjct: 456 DAFKLKTRMVQE 467
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 130/291 (44%), Gaps = 23/291 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM-------TDPDCVTYNTLIKAACEAEKN 81
G E ++S+N+++ C G +R A VLE + PD V++N+L N
Sbjct: 86 GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLF--------N 137
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
+ + V +Y + ++ SPN TY + I FC ++ A+ M LSP+
Sbjct: 138 GFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPN 197
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+++ +I +CK ++ A+ + EM + +V Y LI C + + A +++
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 261
M+ + P Y T+++ + +G+ +++ +G + Y +
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG--------MRLDITAYGVI 309
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
I GLC + EA EI+ M + L PD V ++ +++ + + ++ A +
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + ++ ++ LCG GKL+EA ++E M PD V + T++ A ++ +
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 85 SIPYVRIVELYHQMCVRELSP------------------------------NETTYRSMI 114
V +YH++ R P N+ Y +I
Sbjct: 358 -------VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLI 410
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
C E + ++E GL P Y+ I+ CK + A ++K M+ +G+
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
D+ AY LI L + ++EAR +F EML G+SP +D L+ AY +G + L
Sbjct: 471 LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Query: 235 QDEVIQKGFL 244
++ ++G +
Sbjct: 531 LLDMQRRGLV 540
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 135/320 (42%), Gaps = 49/320 (15%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V++ A++ C +G+++ AE + +M + P+ + Y T+I + + N
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA----- 287
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++ +M + + + T Y +I C +++EA I+ M + L P ++ ++
Sbjct: 288 --MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHA------------------------------ 179
+ + K+ M A+ M +++++G PDV A
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
Y +LI LC + +E LF ++ G+ P Y + + C +G F L+ ++
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
Q+G L L+ Y LI+GL EA ++ M + PD + +I
Sbjct: 466 QEGLLL--------DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 300 FRRIRELRKAFELKLEMDQK 319
+ + + A +L L+M ++
Sbjct: 518 YEKEGNMAAASDLLLDMQRR 537
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
R +P+ +++ S++ C +V+ A I+ M G P SY+ +I C+N ++
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 161 A-LEMKVEMLDKGIF--PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 217
A L ++ G PD+ ++ L + ++L+ ++ ++L+ SP TY T
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGF-SKMKMLDEVFVYMGVMLKCCSPNVVTYST 168
Query: 218 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 277
++ +C GE ++ K F + SP++VT+ LI G C + A+ +
Sbjct: 169 WIDTFCKSGEL--------QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 278 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+ M + + + V+Y+A+I GF + E+++A E+ M
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM 259
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
QM V L + +Y ++I C R+E A L M ++G+SP+ +++ +S +
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 216
++ K + ++L G PDV + L+I LC + + +A D F+EML G+ P TY+
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYN 534
Query: 217 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 276
L+ + C G+ + L ++ + G SP L YNA I C ++ +A E
Sbjct: 535 ILIRSCCSTGDTDRSVKLFAKMKENG--------LSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 277 ILRGMPEMLLDPDEVSYSAVISGFR---RIRELRKAFE 311
+L+ M + L PD +YS +I R E R+ F
Sbjct: 587 LLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC---EAEKN 81
G + S+NAV+ LC ++ A L +M D P+ VT+NT + + +K
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 82 HNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPH 141
H + ++ V P+ T+ +I C +++A + M E G+ P+
Sbjct: 480 HG----------VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+Y+ +I C + +++++ +M + G+ PD++AY IQ C R++ +A +L +
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
ML G+ P TY TL++A G S+ + + + G +P
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G LV+FN + G +++ VLEK+ PD +T++ +I C A++ +
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + +M + PNE TY +IR C + +V + M E GLSP +
Sbjct: 515 -------FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYA 567
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ I FCK +++ KA E+ ML G+ PD Y LI+ L R EAR++F +
Sbjct: 568 YNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIE 627
Query: 205 LRGMSPGGRT 214
G P T
Sbjct: 628 RHGCVPDSYT 637
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 137/351 (39%), Gaps = 83/351 (23%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC---------------E 77
+NAV+ L L A ++M PD TYN LI C E
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 78 AEKNHNPSIPYVRIVELY-------------HQMCVRELSPNETTYRSMIR--------- 115
E N Y +++ + M VR+L+PNE T R+ +
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPC 302
Query: 116 ------------------------LFCDRNR--VEEAVGILRLMAEKGLSPHADSYSRII 149
L+C N +E LR + E+G P + +++ +
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAM 362
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
S K ++ + + + +G+ P + Y +L+Q L + +R E ++M + G+
Sbjct: 363 SCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLL 422
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
+Y+ +++ C E+ +G SP+LVT+N + G +
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI--------SPNLVTFNTFLSG--YSV 472
Query: 270 RPDEALEILRGMPEMLL----DPDEVSYSAVISGFRRIRELRKAFELKLEM 316
R D ++ + G+ E LL PD +++S +I+ R +E++ AF+ EM
Sbjct: 473 RGD--VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Query: 172 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
G+ P Y +I L L A FQ+M G P TY+ L+ C KG +
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 232 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 291
L ++ Q+G P++ TY LI G R DEAL+ L M L+P+E
Sbjct: 235 IRLVKQMEQEGN--------RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 292 SYSAVISGFRRIRELRKAFELKLEMDQKET 321
+ + G R KAFE+ + +K++
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDS 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 20/212 (9%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+++ Q+ + P+ Y ++I N ++ A + M G P +Y+ +I
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
CK + +A+ + +M +G P+V Y +LI R+ EA + M +R ++P
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 213 RTYDTLVEAY------CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
T T V C E F +D +Q+ V Y+A+++ L
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQR--------------VGYDAVLYCLS 331
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
E + LR + E PD +++A +S
Sbjct: 332 NNSMAKETGQFLRKIGERGYIPDSSTFNAAMS 363
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 61/312 (19%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMTD---PDCVTYNTLIKAACEAEKNHNPSIPYV 89
LV+FN ++ LC +R+A+ V E M D PD TY+ L++ P++P
Sbjct: 202 NLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGW-----GKEPNLPKA 256
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL----------------- 132
R E++ +M P+ TY M+ + C RV+EA+GI+R
Sbjct: 257 R--EVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 133 ------------------MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
M G+ ++ +I FCK M + EM KG+
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
P+ + ++++ L + EA D+F++M ++ P TY +++ +C K E +
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
+ +KG PS+ T++ LI+GLC + +A +L M EM + P V+
Sbjct: 434 WKYMRKKGVF--------PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT-- 483
Query: 295 AVISGFRRIREL 306
F R+R+L
Sbjct: 484 -----FGRLRQL 490
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 13/251 (5%)
Query: 8 SSTVATLKTFW----NVP-----IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLE 58
S T + L W N+P R AG +V+++ +V LC G++ EA ++
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 59 KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFC 118
M DP T I + + V+ + +M + + + S+I FC
Sbjct: 297 SM-DPSICKPTTFIYSVLVHTYGTENRLE--EAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 119 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 178
NR++ +L+ M KG++P++ S + I+ + E +A ++ +M+ K PD
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDAD 412
Query: 179 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
Y ++I++ C ++ + A +++ M +G+ P T+ L+ C + K L +E+
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Query: 239 IQKGFLPYYVT 249
I+ G P VT
Sbjct: 473 IEMGIRPSGVT 483
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 9/214 (4%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
N T+ ++R + +V+EA+ +M + L P+ +++ ++S CK+K + KA E+
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
M D+ PD Y +L++ + L +AR++F+EM+ G P TY +V+ C
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G + I + P + P+ Y+ L+H R +EA++ M
Sbjct: 286 GRVDEALG-----IVRSMDP---SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 337
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ D ++++I F + ++ + + EM K
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE-AEKNH 82
+G + + FN+++ C +++ VL++M P+ + N +++ E EK+
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 395
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+++ +M ++ P+ TY +I++FC++ +E A + + M +KG+ P
Sbjct: 396 --------AFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSM 446
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
++S +I+ C+ + KA + EM++ GI P +G L QLL + R
Sbjct: 447 HTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 135/325 (41%), Gaps = 56/325 (17%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM-----TDPDCVTYNTLIKAACEAEKNHN 83
G + FN +VK C G + A V+E+M + P+ +TY+TL+ ++
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 84 PSIPYVRIVELYHQMCVRE-LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
VEL+ M +E +SP+ T+ MI FC VE A IL M + G +P+
Sbjct: 251 A-------VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+YS +++ FCK ++ +A + E+ G+ D Y L+ C EA L E
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
Query: 203 M--------------LLRGMSPGGR---------------------TYDTLVEAYCLKGE 227
M +LRG+S GR +Y ++ A C GE
Sbjct: 364 MKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGE 423
Query: 228 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
K + ++G P++ T+N L+ LC + + +L G + L
Sbjct: 424 LEKAVKFLSVMSERGIWPHH--------ATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Query: 288 PDEVSYSAVISGFRRIRELRKAFEL 312
P S+ AV+ + R+L FEL
Sbjct: 476 PGPKSWGAVVESICKERKLVHVFEL 500
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 137/300 (45%), Gaps = 19/300 (6%)
Query: 25 FTAAGTEKGL----VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEK 80
F A +KG +++ ++ L K +A+L +M C +L +
Sbjct: 76 FNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLF---LNLMR 132
Query: 81 NHNPSIPYVRIVELYHQM-CVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK-GL 138
+ + S + +++E+++ + + + P+ + + L D V + +L GL
Sbjct: 133 HFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGL 192
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEAR 197
P+ ++ ++ CKN ++ A + EM GI +P+ Y L+ L R EA
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 198 DLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 256
+LF++M+ + G+SP T++ ++ +C GE + + D + + G +P++
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC--------NPNVY 304
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
Y+AL++G C + EA + + + L D V Y+ +++ F R E +A +L EM
Sbjct: 305 NYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM 364
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHN 83
G + V + ++ C G+ EA +L +M C +TYN +++ ++
Sbjct: 332 TGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEE 391
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+++ Q + N+ +YR ++ C +E+AV L +M+E+G+ PH
Sbjct: 392 A-------LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHA 444
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ ++ R C++ + + + L G+ P ++G +++ +C +R+L+ +L +
Sbjct: 445 TWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Query: 204 L 204
+
Sbjct: 505 V 505
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 31/304 (10%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E +V++++++ C G LR A+ E M PD V Y L+ +
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL---- 476
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + +M + + N + S+I +C NR +EA+ + RLM G+ P +
Sbjct: 477 ---MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 145 YSRII------SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
++ ++ FCK+ + L++ M I D+ ++I LL R+ +A
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYC-LK--GEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
F ++ M P TY+T++ YC L+ E ++F L VT F P+
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK-----------VTPFGPNT 642
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
VT LIH LC D A+ + M E P+ V+Y ++ F + ++ +F+L E
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 316 MDQK 319
M +K
Sbjct: 703 MQEK 706
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 8/213 (3%)
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
+PN T+ ++I FC R ++ A + ++M ++G+ P +YS +I + K +G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ + L KG+ DV + I + L A +++ ML +G+SP TY L++ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
G + F + +++++G PS+VTY++LI G C + M +
Sbjct: 403 QDGRIYEAFGMYGQILKRG--------MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
M PD V Y ++ G + + A ++M
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 56 VLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
++E +PD VTYNT+I C + RI EL V PN T +I
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAE----RIFELLK---VTPFGPNTVTLTILIH 650
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
+ C N ++ A+ + +MAEKG P+A +Y ++ F K+ ++ + ++ EM +KGI P
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 710
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
+ +Y ++I LC + R+ EA ++F + + + P Y L+ YC G + L
Sbjct: 711 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770
Query: 236 DEVIQKGFLP 245
+ +++ G P
Sbjct: 771 EHMLRNGVKP 780
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 21/284 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAE---KNHNPSI 86
+V FN+++ C + EA V M PD T+ T+++ + + K+ P+I
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
++L+ M ++S + +I L +R+E+A + E + P +Y+
Sbjct: 556 G----LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+I +C + + +A E E+L F P+ +LI +LC + A +F M
Sbjct: 612 TMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+G P TY L++ + + F L +E+ +KG SPS+V+Y+ +I GL
Sbjct: 671 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI--------SPSIVSYSIIIDGL 722
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
C R DEA I + L PD V+Y+ +I G+ ++ L +A
Sbjct: 723 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 72/354 (20%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEA------ 78
G +V+F ++ C G++ A + + M +PD + Y+TLI +A
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 79 EKNHNPSIP----------------YVRIVEL------YHQMCVRELSPNETTYRSMIRL 116
K + ++ YV+ +L Y +M + +SPN TY +I+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
C R+ EA G+ + ++G+ P +YS +I FCK + + +M+ G PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 177 VHAYGLLIQLL-----------------------------------CHQRRLLEARDLFQ 201
V YG+L+ L C R EA +F+
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 261
M + G+ P T+ T++ ++ F K H++ + + F S + N +
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVV 578
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF---RRIRELRKAFEL 312
IH L R ++A + + E ++PD V+Y+ +I G+ RR+ E + FEL
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+++E A +L L+ + G +P+ ++ +I+ FCK EM +A ++ M +GI PD+ AY
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
LI L LF + L +G+ + + ++ Y G+ + + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+G SP++VTY LI GLC R EA + + + ++P V+YS++I GF
Sbjct: 385 QG--------ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 301 RRIRELRKAFELKLEM 316
+ LR F L +M
Sbjct: 437 CKCGNLRSGFALYEDM 452
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 153 CKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C+ + KALE+ V G+ P Y +L L+ R L A D F ++ G+ P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPS 215
Query: 212 G-RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
G + +++A KGE +K V+++GF +V+ N ++ GL Q
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGF--------RVGIVSCNKVLKGLSVDQ- 266
Query: 271 PDEALEILRGMPEMLLD----PDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+E+ + ++LD P+ V++ +I+GF + E+ +AF+L M+Q+
Sbjct: 267 ----IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 41/315 (13%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELY 95
++ VVK LC +G L EA +L + + Y T I C + + +++
Sbjct: 218 TYAIVVKALCRKGNLEEAAMLL--IENESVFGYKTFINGLCVTGETEKAVALILELIDRK 275
Query: 96 H----------QMCVR------ELSPNETTYRSM---------------IRLFCDRNRVE 124
+ M VR ++ E+ M I +C +
Sbjct: 276 YLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLP 335
Query: 125 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 184
EA+G L M KGL + S I+ +CK +ALE E D IF D Y +
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 185 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
L R+ EA +L QEM RG+ P Y TL++ YCL+G+ L DE+I G
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG-- 453
Query: 245 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
SP L+TYN L+ GL +E LEI M P+ V+ S +I G R
Sbjct: 454 ------MSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 305 ELRKAFELKLEMDQK 319
++++A + ++QK
Sbjct: 508 KVKEAEDFFSSLEQK 522
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 18/314 (5%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSI 86
A G + V+ + +++ LC K++EAE + + +K CEA +
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYK 545
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
+VR+ E ++ Y + C +E+A +L+ M+ + P
Sbjct: 546 AFVRL----------EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCG 595
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++I FCK + +A + M+++G+ PD+ Y ++I C L +A LF++M R
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 207 GMSPGGRTYDTLVEAYC-LKGEFSKVFHLQDEVIQKG----FLPYYVTSFSPSLVTYNAL 261
G+ P TY L++ Y L E + +Q EV ++ + +V Y L
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVL 715
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
I C ++A E+ M + L+PD V+Y+ +IS + R + A L E+ +K
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK-- 773
Query: 322 CWPLDQDTNESLVK 335
+ + ++ E+ VK
Sbjct: 774 -YNIPSESFEAAVK 786
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 22/285 (7%)
Query: 39 AVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYV-RIVELYHQ 97
A+VK G EA VL + DCV IKA C N + ++ L+ Q
Sbjct: 151 ALVKAYVSLGMFDEATDVLFQSKRLDCVVD---IKA-CNFLMNRMTEFGKIGMLMTLFKQ 206
Query: 98 MCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 157
+ L NE TY +++ C + +EEA L+ E + Y I+ C E
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAA---MLLIE---NESVFGYKTFINGLCVTGE 260
Query: 158 MGKALEMKVEMLDKGIFP--DVHAY-GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
KA+ + +E++D+ D+ A G++++ C++ ++ A + EM G
Sbjct: 261 TEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYA 320
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 274
+++ YC + D+++ KG + V + ++ C EA
Sbjct: 321 CLAVIDRYCKNMNLPEALGFLDKMLGKG--------LKVNCVIVSLILQCYCKMDMCLEA 372
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
LE + +M + D V Y+ ++ + +AFEL EM +
Sbjct: 373 LEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR 417
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 17/258 (6%)
Query: 45 CGE-GKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
CGE K++E + +++ PD TYN LI + S + ++L+ +M +++
Sbjct: 131 CGELEKMKERLSSIDEFGKPDACTYNILIHGCSQ-------SGCFDDALKLFDEMVKKKV 183
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKAL 162
P T+ ++I C +RV+EA+ + M + G+ P Y+ +I C+ E+ A
Sbjct: 184 KPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAF 243
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
++K E + I D Y LI L R E + +EM +G P TY+ L+ +
Sbjct: 244 KLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
C++ + + DE+++KG P +++YN ++ ++ +EA + MP
Sbjct: 304 CVENDSESANRVLDEMVEKGL--------KPDVISYNMILGVFFRIKKWEEATYLFEDMP 355
Query: 283 EMLLDPDEVSYSAVISGF 300
PD +SY V G
Sbjct: 356 RRGCSPDTLSYRIVFDGL 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P+ TY +I ++A+ + M +K + P ++ +I CK+ + +AL+M
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 165 KVEMLD-KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
K +ML G+ P VH Y LI+ LC L A L E + Y TL+ +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
G ++V + +E+ +KG P VTYN LI+G C + A +L M E
Sbjct: 270 KAGRSNEVSMILEEMSEKGC--------KPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
L PD +SY+ ++ F RI++ +A L +M ++ C P
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR-GCSP 361
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM-----TDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
V+F ++ LC + +++EA + M P Y +LIKA C+ S +
Sbjct: 188 VTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQI---GELSFAFK 244
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E Y ++ + Y ++I R E IL M+EKG P +Y+ +I
Sbjct: 245 LKDEAYEG----KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLI 300
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ FC + A + EM++KG+ PDV +Y +++ + ++ EA LF++M RG S
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
P +Y + + C +F + + DE++ KG+ P
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 37 FNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+ +++K LC G+L A + E D Y+TLI + +A +++ S+
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSM------ 279
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+ +M + P+ TY +I FC N E A +L M EKGL P SY+ I+ F
Sbjct: 280 -ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVF 338
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
+ K+ +A + +M +G PD +Y ++ LC + EA + EML +G P
Sbjct: 339 FRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRR 398
Query: 213 RTYDTLVEAYCLKGEF 228
+ ++ C G+
Sbjct: 399 DRLEGFLQKLCESGKL 414
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 12/191 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
++ ++ L G+ E +LE+M++ PD VTYN LI C N S R++
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCV----ENDSESANRVL 316
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+ +M + L P+ +Y ++ +F + EEA + M +G SP SY +
Sbjct: 317 D---EMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ + +A + EML KG P +Q LC + LE L RG++
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK-LEILSKVISSLHRGIAGDA 432
Query: 213 RTYDTLVEAYC 223
+ ++ C
Sbjct: 433 DVWSVMIPTMC 443
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 21/286 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G + + +F V++ EG+L EA + +M +PD + Y TLI A C K+ P
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC---KHMKP 582
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+I ++L+ M ++S + +I L +R+E+A + E + P +
Sbjct: 583 TIG----LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
Y+ +I +C + + +A E E+L F P+ +LI +LC + A +F M
Sbjct: 639 YNTMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+G P TY L++ + + F L +E+ +KG SPS+V+Y+ +I
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI--------SPSIVSYSIIID 749
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
GLC R DEA I + L PD V+Y+ +I G+ ++ L +A
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 8/213 (3%)
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
+PN T+ ++I FC R ++ A + ++M ++G+ P +YS +I + K +G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ + L KG+ DV + I + L A +++ ML +G+SP TY L++ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
G + F + +++++G PS+VTY++LI G C + M +
Sbjct: 403 QDGRIYEAFGMYGQILKRG--------MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
M PD V Y ++ G + + A ++M
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 46/326 (14%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE------- 77
G E +V++++++ C G LR A+ E M PD V Y L+ +
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 78 ---AEKNHNPSIPYVRIV------------------ELYHQMCVRELSPNETTYRSMIRL 116
+ K SI +V +++ M + + P+ T+ +++R+
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
R+EEA+ + M + GL P A +Y +I FCK+ + L++ M I D
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC-LK--GEFSKVFH 233
+ ++I LL R+ +A F ++ M P TY+T++ YC L+ E ++F
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
L VT F P+ VT LIH LC D A+ + M E P+ V+Y
Sbjct: 661 LLK-----------VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 294 SAVISGFRRIRELRKAFELKLEMDQK 319
++ F + ++ +F+L EM +K
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEK 735
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 56 VLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
++E +PD VTYNT+I C + RI EL V PN T +I
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAE----RIFELLK---VTPFGPNTVTLTILIH 679
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
+ C N ++ A+ + +MAEKG P+A +Y ++ F K+ ++ + ++ EM +KGI P
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
+ +Y ++I LC + R+ EA ++F + + + P Y L+ YC G + L
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Query: 236 DEVIQKGFLP 245
+ +++ G P
Sbjct: 800 EHMLRNGVKP 809
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 46/307 (14%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEA------ 78
G +V+F ++ C G++ A + + M +PD + Y+TLI +A
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 79 EKNHNPSIP----------------YVRIVEL------YHQMCVRELSPNETTYRSMIRL 116
K + ++ YV+ +L Y +M + +SPN TY +I+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 176
C R+ EA G+ + ++G+ P +YS +I FCK + + +M+ G PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS---KVFH 233
V YG+L+ L Q +L A +ML + + +++L++ +C F KVF
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
L + P + T+ ++ R +EAL + M +M L+PD ++Y
Sbjct: 521 LMG-----------IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 294 SAVISGF 300
+I F
Sbjct: 570 CTLIDAF 576
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+++E A +L L+ + G +P+ ++ +I+ FCK EM +A ++ M +GI PD+ AY
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
LI L LF + L +G+ + + ++ Y G+ + + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+G SP++VTY LI GLC R EA + + + ++P V+YS++I GF
Sbjct: 385 QG--------ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 301 RRIRELRKAFELKLEM 316
+ LR F L +M
Sbjct: 437 CKCGNLRSGFALYEDM 452
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 153 CKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C+ + KALE+ V G+ P Y +L L+ R L A D F ++ G+ P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPS 215
Query: 212 G-RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
G + +++A KGE +K V+++GF +V+ N ++ GL Q
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGF--------RVGIVSCNKVLKGLSVDQ- 266
Query: 271 PDEALEILRGMPEMLLD----PDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+E+ + ++LD P+ V++ +I+GF + E+ +AF+L M+Q+
Sbjct: 267 ----IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 39/306 (12%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
F +VK C EG EA + +M + + YNTL+ A +N S +
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA-------YNKSNHIEEVE 399
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
L+ +M + L P+ TY ++ + R + + +LR M + GL P+ SY+ +IS +
Sbjct: 400 GLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY 459
Query: 153 CKNKEMGK-ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ K+M A + + M G+ P H+Y LI +A F+EM G+ P
Sbjct: 460 GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPS 519
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQD----EVIQKGFLPY------------------YVT 249
TY ++++A+ G+ K+ + E I+ + Y V+
Sbjct: 520 VETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 250 SFS-----PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
FS PS++TYN L++ + + ++L+ M + L PD ++YS +I F R+R
Sbjct: 580 EFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVR 639
Query: 305 ELRKAF 310
+ ++AF
Sbjct: 640 DFKRAF 645
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 17/280 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+NA + L + +A V E M PD VT LI +A ++ +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAK------EVW 329
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E++ +M + + ++ + +++ FCD EEA+ I M +KG+ + Y+ ++ +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
K+ + + + EM DKG+ P Y +L+ + + L +EM G+ P
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
++Y L+ AY + S ++ FL PS +Y ALIH +
Sbjct: 450 KSYTCLISAYGRTKKMS-------DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+A M + + P +Y++V+ FRR + K E+
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 45/231 (19%)
Query: 54 EAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETT 109
E +L +M D P+ +Y LI A +K + + + + +M L P+ +
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMA------ADAFLRMKKVGLKPSSHS 487
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y ++I + E+A M ++G+ P ++Y+ ++ F ++ + GK +E+ ML
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML 547
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE--------------MLLRGMSPGGR-- 213
+ I Y L+ Q +EARD+ E ML+ + GG+
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 214 -------------------TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
TY T++ A+ +F + F +++ G +P
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 9/239 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ Y +M ++SPN T ++ +C ++++ + +L+ M G SY+ +I+
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C+ + AL++K M G+ P+V + LI C +L EA +F EM ++P
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY+TL+ Y +G+ F ++++ G ++TYNALI GLC +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNG--------IQRDILTYNALIFGLCKQAKT 394
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 330
+A + ++ + + L P+ ++SA+I G + + FEL M + C P +Q N
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM-IRSGCHPNEQTFN 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 25/292 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM-------TDPDCVTYNTLIKAACEAEKNHNPSIPY 88
+ N V+ C GKL + +L+ M TD V+YNTLI CE
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD---VSYNTLIAGHCEKG-------LL 289
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
++L + M L PN T+ ++I FC +++EA + M ++P+ +Y+ +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I+ + + + A +M+ GI D+ Y LI LC Q + +A +E+ +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P T+ L+ C++ + F L +I+ G P+ T+N L+ C
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC--------HPNEQTFNMLVSAFCRN 461
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
+ D A ++LR M + D + V +G + + + +L EM+ K+
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKK 513
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
RE + S+ + F + A M + G P +S + +S +
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
AL EM I P+ + +++ C +L + +L Q+M G +Y+TL+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
+C KG S L++ + + G P++VT+N LIHG C + EA ++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSG--------LQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
M + + P+ V+Y+ +I+G+ + + AF +M
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 11/211 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
VS+N ++ C +G L A + M P+ VT+NTLI C A K S
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS----- 328
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+++ +M ++PN TY ++I + + E A M G+ +Y+ +I
Sbjct: 329 --KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
CK + KA + E+ + + P+ + LI C ++ +L++ M+ G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+T++ LV A+C +F + E++++
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 34/209 (16%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHN 83
+G + +V+FN ++ C KL+EA V +M P+ VTYNTLI + + +H
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ-QGDHE 360
Query: 84 PSIPYV---------RIVELYHQMC---------------VRELS-----PNETTYRSMI 114
+ + R + Y+ + V+EL PN +T+ ++I
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
C R + + + M G P+ +++ ++S FC+N++ A ++ EM+ + I
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
D + L HQ + + L QEM
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 9/239 (3%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ Y +M ++SPN T ++ +C ++++ + +L+ M G SY+ +I+
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C+ + AL++K M G+ P+V + LI C +L EA +F EM ++P
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY+TL+ Y +G+ F ++++ G ++TYNALI GLC +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNG--------IQRDILTYNALIFGLCKQAKT 394
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 330
+A + ++ + + L P+ ++SA+I G + + FEL M + C P +Q N
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM-IRSGCHPNEQTFN 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 25/292 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM-------TDPDCVTYNTLIKAACEAEKNHNPSIPY 88
+ N V+ C GKL + +L+ M TD V+YNTLI CE
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD---VSYNTLIAGHCEKG-------LL 289
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
++L + M L PN T+ ++I FC +++EA + M ++P+ +Y+ +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I+ + + + A +M+ GI D+ Y LI LC Q + +A +E+ +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P T+ L+ C++ + F L +I+ G P+ T+N L+ C
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC--------HPNEQTFNMLVSAFCRN 461
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
+ D A ++LR M + D + V +G + + + +L EM+ K+
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKK 513
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
RE + S+ + F + A M + G P +S + +S +
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
AL EM I P+ + +++ C +L + +L Q+M G +Y+TL+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
+C KG S L++ + + G P++VT+N LIHG C + EA ++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSG--------LQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
M + + P+ V+Y+ +I+G+ + + AF +M
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 11/211 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
VS+N ++ C +G L A + M P+ VT+NTLI C A K S
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS----- 328
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+++ +M ++PN TY ++I + + E A M G+ +Y+ +I
Sbjct: 329 --KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
CK + KA + E+ + + P+ + LI C ++ +L++ M+ G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+T++ LV A+C +F + E++++
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 34/209 (16%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHN 83
+G + +V+FN ++ C KL+EA V +M P+ VTYNTLI + + +H
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ-QGDHE 360
Query: 84 PSIPYV---------RIVELYHQMC---------------VRELS-----PNETTYRSMI 114
+ + R + Y+ + V+EL PN +T+ ++I
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
C R + + + M G P+ +++ ++S FC+N++ A ++ EM+ + I
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
D + L HQ + + L QEM
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 18/274 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT---DPDCVTYNTLIKAACEAEKNHNPS 85
G + L SFN ++ LC ++ +A + + D VTYN ++ C ++
Sbjct: 156 GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRT---- 211
Query: 86 IPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
+ +E+ +M R ++PN TTY +M++ F ++ A M ++ +Y
Sbjct: 212 ---PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+ ++ F E+ +A + EM+ +G+ P V Y +IQ+LC + + A +F+EM+
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
RG P TY+ L+ GEFS+ L + +G P+ TYN +I
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG--------CEPNFQTYNMMIRYY 380
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
++AL + M P+ +Y+ +ISG
Sbjct: 381 SECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 14/240 (5%)
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ ++ C ++L+ ++ +++ + C RVE+A + R + + S +Y+ I++
Sbjct: 149 FLNMHEHGCFQDLA----SFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILN 203
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+C K KALE+ EM+++GI P++ Y +++ ++ A + F EM R
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY T+V + + GE + ++ DE+I++G LP S+ TYNA+I LC
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP--------SVATYNAMIQVLCKKDN 315
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 330
+ A+ + M +P+ +Y+ +I G E + EL M+ E C P Q N
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN-EGCEPNFQTYN 374
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 117/269 (43%), Gaps = 51/269 (18%)
Query: 70 TLIKAACEAEKNHNP-SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVG 128
L+ + + NH P ++ + ++ +H+ V + S + RL
Sbjct: 57 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLH----PTVWS 112
Query: 129 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 188
++ M + P +++ + R+ + KA+++ + M + G F D+ ++ ++ +LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 189 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 248
+R+ +A +LF+ LRG
Sbjct: 173 KSKRVEKAYELFRA--LRG----------------------------------------- 189
Query: 249 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 308
FS VTYN +++G C +R +ALE+L+ M E ++P+ +Y+ ++ GF R ++R
Sbjct: 190 -RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 309 AFELKLEMDQKETCWPLDQDTNESLVKDF 337
A+E LEM +++ +D T ++V F
Sbjct: 249 AWEFFLEMKKRDC--EIDVVTYTTVVHGF 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 16 TFWNVPIRGFTAAGT----------------EKGLVSFNAVVKRLCGEGKLREAEAVLEK 59
T +N ++GF AG E +V++ VV G+++ A V ++
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 60 MTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
M P TYN +I+ C+ + N V ++ +M R PN TTY +IR
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENA-------VVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
+++ M +G P+ +Y+ +I + + E+ KAL + +M P
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 176 DVHAYGLLIQLLCHQRR----LLEARDLFQEMLLRGMSPGG 212
++ Y +LI + ++R ++ F + +LR S G
Sbjct: 404 NLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSG 444
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 8/213 (3%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
PN ++ C NR+++A+ ++ LM G+ P A +Y+ ++++ CK +G A+++
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
+M D G + Y L++ LC L ++ + ++ +G++P TY L+EA
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
+ + L DE+I KG P+LV+YN L+ G C R D+A+ + R +P
Sbjct: 224 ERGTDEAVKLLDEIIVKG--------GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 285 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
+ VSY+ ++ +A L EMD
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 17/295 (5%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++ +V +LC G + A ++EKM D + VTYN L++ C + N S+ +V
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCML-GSLNQSLQFV-- 199
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++ + L+PN TY ++ +EAV +L + KG P+ SY+ +++
Sbjct: 200 ----ERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTG 255
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
FCK A+ + E+ KG +V +Y +L++ LC R EA L EM +P
Sbjct: 256 FCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPS 315
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY+ L+ + G + + E + KG + VT+ S YN +I LC +
Sbjct: 316 VVTYNILINSLAFHGRTEQALQVLKE-MSKGNHQFRVTATS-----YNPVIARLCKEGKV 369
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 326
D ++ L M P+E +Y+A+ S ++++AF + + K+ C D
Sbjct: 370 DLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD 424
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 27/307 (8%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLI 72
F +P +GF A +VS+N +++ LC +G+ EA ++L +M P VTYN LI
Sbjct: 269 FRELPAKGFKA-----NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+ + + + HQ V T+Y +I C +V+ V L
Sbjct: 324 NSLAFHGRTEQALQVLKEMSKGNHQFRV-----TATSYNPVIARLCKEGKVDLVVKCLDE 378
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M + P+ +Y+ I S N ++ +A + + +K Y +I LC +
Sbjct: 379 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 438
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS---KVFHLQDEVIQKGFLPYYVT 249
A L EM G P TY L+ CL+G F+ +V + +E
Sbjct: 439 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES----------E 488
Query: 250 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+ P++ +NA+I GLC +R D A+E+ M E P+E +Y+ ++ G EL A
Sbjct: 489 NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Query: 310 FELKLEM 316
E+ E+
Sbjct: 549 KEVLDEL 555
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 141/340 (41%), Gaps = 50/340 (14%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREA----EAVLEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G V++NA+V+ LC G L ++ E +++K P+ TY+ L++AA + E+ +
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK-ERGTDE 229
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V+L ++ V+ PN +Y ++ FC R ++A+ + R + KG + S
Sbjct: 230 A------VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++ C + +A + EM P V Y +LI L R +A + +E
Sbjct: 284 YNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-- 341
Query: 205 LRGMSPGGR-------TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP------------ 245
MS G +Y+ ++ C +G+ V DE+I + P
Sbjct: 342 ---MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC 398
Query: 246 ----------YYVTSFSPSLVT-----YNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
Y + S S Y ++I LC A ++L M DPD
Sbjct: 399 EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDA 458
Query: 291 VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 330
+YSA+I G A E+ M++ E C P + N
Sbjct: 459 HTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 498
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+R++EL M + P+ + Y ++ C R V A+ ++ M + G + +Y+ +
Sbjct: 126 IRVIEL---MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNAL 182
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
+ C + ++L+ ++ KG+ P+ Y L++ +R EA L E++++G
Sbjct: 183 VRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG 242
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------------- 249
P +Y+ L+ +C +G L E+ KGF V+
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANS 302
Query: 250 --------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
+PS+VTYN LI+ L F R ++AL++L+ M +
Sbjct: 303 LLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 18/275 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
+ G + + S+ A++ G+ + +L++M + P +TYNT+I A
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG---- 224
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ + ++ L+ +M + P+ TY +++ R +EA + R M + G+ P
Sbjct: 225 --GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+YS ++ F K + + K ++ EM G PD+ +Y +L++ + EA +F +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M G +P TY L+ + G + V L FL ++ P TYN LI
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL--------FLEMKSSNTDPDAATYNILI 394
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
E + + M E ++PD +Y +I
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 131/315 (41%), Gaps = 34/315 (10%)
Query: 6 RVSSTVATLKTFWNVPIRG-------------FTAAGTEKGLVSFNAVVKRLCGEGKLRE 52
++S ++ T T N RG G + +V++N ++ G E
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 53 AEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNET 108
AE V M D PD TY+ L++ + + ++ +L +M P+ T
Sbjct: 266 AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR-------LEKVCDLLGEMASGGSLPDIT 318
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
+Y ++ + ++EA+G+ M G +P+A++YS +++ F ++ ++ +EM
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
PD Y +LI++ E LF +M+ + P TY+ ++ A C KG
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGKG-- 435
Query: 229 SKVFHLQDEVIQKGFLPYYVTS-FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
L ++ + L Y + PS Y +I +EAL M E+ +
Sbjct: 436 ----GLHEDA--RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 288 PDEVSYSAVISGFRR 302
P ++ +++ F R
Sbjct: 490 PSIETFHSLLYSFAR 504
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 133/328 (40%), Gaps = 49/328 (14%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLIKA 74
R G L +++ +V+ GKLR E V + + + PD +YN L++A
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETF---GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 75 ACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
+ S + ++HQM +PN TY ++ LF R ++ + M
Sbjct: 327 -------YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
P A +Y+ +I F + + + + +M+++ I PD+ Y +I C + L
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKGGLH 438
Query: 195 E-ARDLFQEMLLRGMSPGGRTYDTLVEAY---CLKGEFSKVFHLQDEV------------ 238
E AR + Q M + P + Y ++EA+ L E F+ EV
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 239 ---IQKGFLPYYVTSFSPSLV---------TYNALIHGLCFFQRPDEALEILRGMPEMLL 286
+G L + LV T+NA I + +EA++ M +
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 287 DPDEVSYSAVISGF---RRIRELRKAFE 311
DPDE + AV+S + R + E R+ FE
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFE 586
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
PNE Y MI L +++ + + M +G+S SY+ +I+ + +N +LE+
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR-DLFQEMLLRGMSPGGRTYDTLVEAYC 223
M ++ I P + Y +I E LF EM G+ P TY+TL+ A
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
++G L DE + F P L TY+ L+ +R ++ ++L M
Sbjct: 259 IRG-------LGDEA-EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
PD SY+ ++ + + +++A + +M Q C P
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM-QAAGCTP 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ +E++ +M + +S + +Y ++I + R E ++ +L M + +SP +Y+ +I
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI 218
Query: 150 SRFCKNK-EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL-EARDLFQEMLLRG 207
+ + + L + EM +GI PD+ Y L+ C R L EA +F+ M G
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGG 277
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+ P TY LVE + KV L E+ G LP + +YN L+
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP--------DITSYNVLLEAYAK 329
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
EA+ + M P+ +YS +++ F + +L LEM T
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 135/320 (42%), Gaps = 38/320 (11%)
Query: 24 GFTAAGTEKG-----LVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKA 74
GF + + G LV++ +V LC GK+ E ++ ++ D DCV Y+ I
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 75 ACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
+ V + +M + ++ + +Y +I VEEA+G+L M
Sbjct: 252 YFKGG-------ALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
++G+ P+ +Y+ II CK ++ +A + +L GI D Y LI +C + L
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ-----DEVIQKGFLPYYV- 248
A + +M RG+ P TY+T++ C+ G S+ + D + L Y+
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIK 424
Query: 249 ----------------TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 292
LV N L+ EA + R MPEM L PD +
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 293 YSAVISGFRRIRELRKAFEL 312
Y+ +I G+ + ++ +A E+
Sbjct: 485 YATMIKGYCKTGQIEEALEM 504
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 149/326 (45%), Gaps = 57/326 (17%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTY-------NTLIKAACEAEKNHNPSIP 87
++F +++ R +G++ A VLE MT+ + V Y + +I C+ K P
Sbjct: 135 LTFCSLIYRFVEKGEMDNAIEVLEMMTNKN-VNYPFDNFVCSAVISGFCKIGK------P 187
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+ + + L PN TY +++ C +V+E ++R + ++G YS
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
I + K + AL EM++KG+ DV +Y +LI L + + EA L +M+ G
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG-----FLPYYVT------------- 249
+ P TY ++ C G+ + F L + ++ G FL YVT
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFL--YVTLIDGICRKGNLNR 365
Query: 250 SFS-----------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+FS PS++TYN +I+GLC R EA E+ +G+ D ++YS ++
Sbjct: 366 AFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYSTLLD 420
Query: 299 GFRRIR------ELRKAF-ELKLEMD 317
+ +++ E+R+ F E K+ MD
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMD 446
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 46/253 (18%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY--SRIISRFCKNKEMGKAL 162
P+ T+ S+I F ++ ++ A+ +L +M K ++ D++ S +IS FCK + AL
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 163 EMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQ-------------------- 201
+D G+ P++ Y L+ LC ++ E RDL +
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 202 ---------------EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 246
EM+ +GM+ +Y L++ +G + L ++I++G
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV--- 308
Query: 247 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
P+L+TY A+I GLC + +EA + + + ++ DE Y +I G R L
Sbjct: 309 -----EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363
Query: 307 RKAFELKLEMDQK 319
+AF + +M+Q+
Sbjct: 364 NRAFSMLGDMEQR 376
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 131/325 (40%), Gaps = 55/325 (16%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V +N ++ LC +G L A VL EK D T TL+ + A + V
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI-HANGGDKGILGLVY 575
Query: 91 IVE-LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS----- 144
+E L +C+ L+ I L C R E A+ + +M KGL+ S
Sbjct: 576 GLEQLNSDVCLGMLN-------DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKT 628
Query: 145 -----------------------------YSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
Y+ II+ CK + KAL + +G+
Sbjct: 629 LVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTL 688
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
+ Y LI LC Q L+EA LF + G+ P TY L++ C +G F L
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
D ++ KG +P +++ YN+++ G C + ++A+ ++ + PD + S+
Sbjct: 749 DSMVSKGLVP--------NIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS 800
Query: 296 VISGFRRIRELRKAFELKLEMDQKE 320
+I G+ + ++ +A + E K
Sbjct: 801 MIKGYCKKGDMEEALSVFTEFKDKN 825
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 146/358 (40%), Gaps = 91/358 (25%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTL---------IKAACEAE 79
G + ++++N V+ LC G++ EA+ V K D +TY+TL I A E
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEV-SKGVVGDVITYSTLLDSYIKVQNIDAVLEIR 435
Query: 80 KNH-NPSIP------------------YVRIVELYHQMCVRELSPNETTYRSMIRLFCDR 120
+ IP Y LY M +L+P+ TY +MI+ +C
Sbjct: 436 RRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKT 495
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH-- 178
++EEA+ + + + +S A Y+RII CK + A E+ +E+ +KG++ D+H
Sbjct: 496 GQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTS 554
Query: 179 -------------------AYGL--------------LIQLLCHQRRLLEARDLFQEMLL 205
YGL I LLC + A +++ M
Sbjct: 555 RTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRR 614
Query: 206 RGMSPG--GRTYDTLV------EAYCLKGEFSKVFHLQDEVI----------QKGFL--P 245
+G++ TLV +AY L + +VI ++GFL
Sbjct: 615 KGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKA 674
Query: 246 YYVTSFSPS------LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
+ SF+ S +TYN+LI+GLC EAL + + + L P EV+Y +I
Sbjct: 675 LNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI 732
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 25/254 (9%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G E L+++ A+++ LC GKL EA + ++ + D Y TLI C + N N
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICR-KGNLN- 364
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
R + M R + P+ TY ++I C RV EA + KG+ +
Sbjct: 365 -----RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVIT 414
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
YS ++ + K + + LE++ L+ I D+ +L++ EA L++ M
Sbjct: 415 YSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMP 474
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
++P TY T+++ YC G+ + + +E+ + S + V YN +I
Sbjct: 475 EMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK---------SSVSAAVCYNRIIDA 525
Query: 265 LCFFQRPDEALEIL 278
LC D A E+L
Sbjct: 526 LCKKGMLDTATEVL 539
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G +++N+++ LC +G L EA + + + + P VTY LI C+
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEG----- 739
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ +L M + L PN Y S++ +C + E+A+ ++ ++P A +
Sbjct: 740 --LFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFT 797
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
S +I +CK +M +AL + E DK I D + LI+ C + R+ EAR L +EML
Sbjct: 798 VSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 205 L 205
+
Sbjct: 858 V 858
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 103 LSPNETTYRSM--------IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
++ ETT SM I C + +A+ + +G++ + +Y+ +I+ C+
Sbjct: 643 VNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
+ +AL + + + G+ P YG+LI LC + L+A L M+ +G+ P
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII 762
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 274
Y+++V+ YC G+ V+ + + +P T +++I G C +EA
Sbjct: 763 YNSIVDGYCKLGQTEDAMR----VVSRKMMG----RVTPDAFTVSSMIKGYCKKGDMEEA 814
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 325
L + + + D + +I GF + +A L EM E+ L
Sbjct: 815 LSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKL 865
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 15/222 (6%)
Query: 60 MTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
++ D + Y +I C+ V+ + L R ++ N TY S+I C
Sbjct: 650 LSSMDVIDYTIIINGLCKEG-------FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
+ + EA+ + + GL P +Y +I CK A ++ M+ KG+ P++
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII 762
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
Y ++ C + +A + ++ ++P T ++++ YC KG+ + + E
Sbjct: 763 YNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Query: 240 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
K + S + LI G C R +EA +LR M
Sbjct: 823 DK--------NISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 11/210 (5%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLE----KMTDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
++ + ++ LC EG L +A + + + +TYN+LI C+ V
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQG-------CLV 707
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ L+ + L P+E TY +I C +A +L M KGL P+ Y+ I+
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+CK + A+ + + + PD +I+ C + + EA +F E + +S
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
+ L++ +C KG + L E++
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLLREML 857
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P+ TY ++I+ + ++EA + R M E G+ P +Y+ +IS KN + + L++
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA-RDLFQEMLLRGMSPGGRTYDTLVEAYC 223
EML G+ PD+ +Y L+ R EA + L +++ L G+ PG TY+ L++A C
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
G D I+ + + P L+TYN LI+GLC +R ++R + +
Sbjct: 166 KSGH-------TDNAIE--LFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 334
P+ V+Y+ ++ + + + + K +L L+M K+ + D N ++V
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM--KKEGYTFDGFANCAVV 265
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P TYN L+ A C++ N +EL+ + R + P TY +I C R
Sbjct: 152 PGIDTYNILLDALCKSGHTDNA-------IELFKHLKSR-VKPELMTYNILINGLCKSRR 203
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
V ++R + + G +P+A +Y+ ++ + K K + K L++ ++M +G D A
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGM-SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
++ L R EA + E++ G S +Y+TL+ Y G V L +E+ K
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 242 GFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEA 274
G P T PS+VT N LI GLC D A
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 275 LEILRGMPEMLLDPDEVSYSAVI 297
+ + M DE +Y++V+
Sbjct: 384 MRLFASMEV----RDEFTYTSVV 402
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 122/293 (41%), Gaps = 27/293 (9%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
N V LC L AE +L PD +TYNTLIK ++ I
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTR----------FIGID 65
Query: 93 ELY---HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E Y +M + P+ TTY S+I + + + M GLSP SY+ ++
Sbjct: 66 EAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLM 125
Query: 150 SRFCKNKEMGKALEMKVEMLD-KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
S + K G+A ++ E + G+ P + Y +L+ LC A +LF+ + R +
Sbjct: 126 SCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-V 184
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P TY+ L+ C V + E+ + G ++P+ VTY ++
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDWMMRELKKSG--------YTPNAVTYTTMLKMYFKT 236
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
+R ++ L++ M + D + AV+S + +A+E E+ + T
Sbjct: 237 KRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 19/290 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRIV 92
F +++ G + +A V K+T DCV + NTLI + N + +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVD-----NGELEKAK-- 171
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+ L PN ++ +I+ F D+ E A + M E + P +Y+ +I
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+N +MGKA + +M+ K I P+ +GLL++ LC + EA+ L +M RG PG
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
Y L+ +G + L E+ ++ P +V YN L++ LC R
Sbjct: 292 VNYGILMSDLGKRGRIDEAKLLLGEMKKR--------RIKPDVVIYNILVNHLCTECRVP 343
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
EA +L M P+ +Y +I GF RI + + M C
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHC 393
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 25/272 (9%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKA---ACEAEKNHNPSIPY 88
S N ++ L G+L +A++ + D P+ V++N LIK C+ E
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA-------- 204
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+++ +M E+ P+ TY S+I C + + +A +L M +K + P+A ++ +
Sbjct: 205 --ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
+ C E +A ++ +M +G P + YG+L+ L + R+ EA+ L EM R +
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P Y+ LV C + + + + E+ KG P+ TY +I G C
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC--------KPNAATYRMMIDGFCRI 374
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+ D L +L M P ++ +++G
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 19/268 (7%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
VSFN ++K + A V ++M + P VTYN+LI C + +
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD-------MGK 239
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
L M + + PN T+ +++ C + EA ++ M +G P +Y ++S
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
K + +A + EM + I PDV Y +L+ LC + R+ EA + EM ++G P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY +++ +C +F ++ + ++ + P+ T+ ++ GL
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAML--------ASRHCPTPATFVCMVAGLIKGGN 411
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVIS 298
D A +L M + L ++ ++S
Sbjct: 412 LDHACFVLEVMGKKNLSFGSGAWQNLLS 439
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 32/228 (14%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKA-ACEAEKNHNP 84
+ +V++N+++ LC + +A+++LE M P+ VT+ L+K C+ E N
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 85 SIPY------------------------VRIVE---LYHQMCVRELSPNETTYRSMIRLF 117
+ + RI E L +M R + P+ Y ++
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
C RV EA +L M KG P+A +Y +I FC+ ++ L + ML P
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
+ ++ L L A + + M + +S G + L+ C+K
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 103/236 (43%), Gaps = 15/236 (6%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ L+HQ + +Y S+I + ILRL+ + + + +I
Sbjct: 66 LSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQH 125
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF---QEMLLRGM 208
+ K + KA+++ ++ + + LI +L L +A+ F ++M LR
Sbjct: 126 YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR-- 183
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P +++ L++ + K ++ + DE+++ PS+VTYN+LI LC
Sbjct: 184 -PNSVSFNILIKGFLDKCDWEAACKVFDEMLE--------MEVQPSVVTYNSLIGFLCRN 234
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+A +L M + + P+ V++ ++ G E +A +L +M+ + C P
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR-GCKP 289
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 19/274 (6%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPY 88
++++ ++ C L EA + M D PD V +N +++ + K +
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA---- 352
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
++L+H M + PN +Y MIR FC ++ +E A+ M + GL P A Y+ +
Sbjct: 353 ---IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I+ F K++ E+ EM +KG PD Y LI+L+ +Q+ A ++ +M+ +
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P T++ ++++Y + + + +E+I+KG P +Y LI GL
Sbjct: 470 EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC--------PDDNSYTVLIRGLIGE 521
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ EA L M + + + Y+ + F R
Sbjct: 522 GKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 35/307 (11%)
Query: 13 TLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRL---------------CGEGKL-REAEAV 56
T++TF + ++ F AA K V ++K+ G KL +EA+ +
Sbjct: 228 TMETF-TIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVL 286
Query: 57 LEKMTD---PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSM 113
+K+ + P+ +TY L+ C + +++ M + L P+ + M
Sbjct: 287 FDKLKERFTPNMMTYTVLLNGWCRVRN-------LIEAARIWNDMIDQGLKPDIVAHNVM 339
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
+ + +A+ + +M KG P+ SY+ +I FCK M A+E +M+D G+
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
PD Y LI Q++L +L +EM +G P G+TY+ L++ +
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATR 459
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
+ +++IQ PS+ T+N ++ + + + M + + PD+ SY
Sbjct: 460 IYNKMIQ--------NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSY 511
Query: 294 SAVISGF 300
+ +I G
Sbjct: 512 TVLIRGL 518
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+PN TY ++ +C + EA I M ++GL P +++ ++ ++++ A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
++ M KG P+V +Y ++I+ C Q + A + F +M+ G+ P Y L+ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
+ + V+ L E+ +KG P TYNALI + + P+ A I M
Sbjct: 414 GTQKKLDTVYELLKEMQEKG--------HPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
+ ++P +++ ++ + R + EM +K C
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC 505
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 51/264 (19%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE----------- 157
TY SM+ + + E V +L M KGL ++++ + F KE
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 158 -----------------------MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
+GK ++ + L + P++ Y +L+ C R L+
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQKGFLPYYVTSF 251
EA ++ +M+ +G+ P ++ ++E K + K+FH + K P
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH-----VMKSKGP------ 364
Query: 252 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
P++ +Y +I C + A+E M + L PD Y+ +I+GF ++L +E
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 312 LKLEMDQKETCWPLDQDTNESLVK 335
L EM +K P D T +L+K
Sbjct: 425 LLKEMQEKGH--PPDGKTYNALIK 446
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPS 85
E+ + SFNA++ KL EA +++ + PD VTYNT+IKA C +
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD-- 211
Query: 86 IPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
I+ ++ ++ P+ ++ +++ F R E I LM K LSP+ SY
Sbjct: 212 -----ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+ + +NK+ AL + M +GI PDVH Y LI L E + EM
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+G++P TY L+ C KG+ + + +E I+ L P++ Y ++ L
Sbjct: 327 KGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLS------RPNM--YKPVVERL 378
Query: 266 CFFQRPDEALEILRG 280
+ DEA ++++
Sbjct: 379 MGAGKIDEATQLVKN 393
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
++ +++ + + +++EA+ + + EK G++P +Y+ +I C+ M L + E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 227
+ G PD+ ++ L++ + +E ++ M + +SP R+Y++ V +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 228 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
F+ +L D + +G SP + TYNALI +E ++ M E L
Sbjct: 279 FTDALNLIDVMKTEGI--------SPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 288 PDEVSYSAVISGFRRIRELRKAFELKLE 315
PD V+Y +I + +L +A E+ E
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYG 181
E A + M E S++ ++S + +K++ +A++ E+ +K GI PD+ Y
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+I+ LC + + + +F+E+ G P +++TL+E + + F + + D + K
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
+ SP++ +YN+ + GL ++ +AL ++ M + PD +Y+A+I+ +R
Sbjct: 258 --------NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 302 RIRELRKAFELKLEMDQK 319
L + + EM +K
Sbjct: 310 VDNNLEEVMKCYNEMKEK 327
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPY 88
++++ ++ C L EA + M D PD V +N +++ + K +
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA---- 351
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
++L+H M + PN +Y MIR FC ++ +E A+ M + GL P A Y+ +
Sbjct: 352 ---IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I+ F K++ E+ EM +KG PD Y LI+L+ +Q+ ++ +M+ +
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P T++ ++++Y + + + DE+I+KG P +Y LI GL
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC--------PDDNSYTVLIRGLISE 520
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ EA L M + + + Y+ + F R
Sbjct: 521 GKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 554
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 8/220 (3%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+PN TY ++ +C + EA I M + GL P +++ ++ ++ + A+
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
++ M KG P+V +Y ++I+ C Q + A + F +M+ G+ P Y L+ +
Sbjct: 353 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
+ + V+ L E+ +KG P TYNALI + + P+ I M
Sbjct: 413 GTQKKLDTVYELLKEMQEKG--------HPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 464
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
+ ++P +++ ++ + R + EM +K C
Sbjct: 465 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC 504
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 51/264 (19%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE----------- 157
TY SM+ + + E V +L M KGL ++++ + F KE
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 254
Query: 158 -----------------------MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
+GK ++ + L + P++ Y +L+ C R L+
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQKGFLPYYVTSF 251
EA ++ +M+ G+ P ++ ++E K + K+FH + K P
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-----VMKSKGP------ 363
Query: 252 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
P++ +Y +I C + A+E M + L PD Y+ +I+GF ++L +E
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 423
Query: 312 LKLEMDQKETCWPLDQDTNESLVK 335
L EM +K P D T +L+K
Sbjct: 424 LLKEMQEKGH--PPDGKTYNALIK 445
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPY 88
++++ ++ C L EA + M D PD V +N +++ + K +
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA---- 352
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
++L+H M + PN +Y MIR FC ++ +E A+ M + GL P A Y+ +
Sbjct: 353 ---IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I+ F K++ E+ EM +KG PD Y LI+L+ +Q+ ++ +M+ +
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P T++ ++++Y + + + DE+I+KG P +Y LI GL
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC--------PDDNSYTVLIRGLISE 521
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ EA L M + + + Y+ + F R
Sbjct: 522 GKSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 8/220 (3%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+PN TY ++ +C + EA I M + GL P +++ ++ ++ + A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
++ M KG P+V +Y ++I+ C Q + A + F +M+ G+ P Y L+ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
+ + V+ L E+ +KG P TYNALI + + P+ I M
Sbjct: 414 GTQKKLDTVYELLKEMQEKG--------HPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
+ ++P +++ ++ + R + EM +K C
Sbjct: 466 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC 505
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 51/264 (19%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE----------- 157
TY SM+ + + E V +L M KGL ++++ + F KE
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 158 -----------------------MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
+GK ++ + L + P++ Y +L+ C R L+
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQKGFLPYYVTSF 251
EA ++ +M+ G+ P ++ ++E K + K+FH + K P
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-----VMKSKGP------ 364
Query: 252 SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
P++ +Y +I C + A+E M + L PD Y+ +I+GF ++L +E
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 312 LKLEMDQKETCWPLDQDTNESLVK 335
L EM +K P D T +L+K
Sbjct: 425 LLKEMQEKGH--PPDGKTYNALIK 446
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 19/270 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N VV G + +A ++M PD T+N LI C + K + +
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSK-------FDLAL 248
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+L+ +M + PN ++ ++IR F ++EE V + M E G + ++
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ + A + +++L+K + P YG L++ LC + + + A ++ +E+ +G +P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
TLVE G K ++++ G L P VT+N L+ LC
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGIL--------PDSVTFNLLLRDLCSSDHST 420
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+A + +PDE +Y ++SGF +
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 19/248 (7%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACE 77
R G E +VSFN +++ GK+ E + +M + C T L+ C
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ + L + + + P+E Y S++ C N+ A+ ++ + +KG
Sbjct: 311 EGRVDD-------ACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
+P + + ++ K+ KA +M++ GI PD + LL++ LC +A
Sbjct: 364 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDAN 423
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
L +G P TY LV + +G + L +E++ K L P + T
Sbjct: 424 RLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDML--------PDIFT 475
Query: 258 YNALIHGL 265
YN L+ GL
Sbjct: 476 YNRLMDGL 483
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 27/233 (11%)
Query: 18 WNVPIRGFTAAG-TEKGL---------------VSFNAVVKRLCGEGKLREAEAV----L 57
+N IRGF ++G E+G+ + +V LC EG++ +A + L
Sbjct: 266 FNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 58 EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
K P Y +L++ C K VR +E+ ++ + +P +++
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENK-------AVRAMEMMEELWKKGQTPCFIACTTLVEGL 378
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
R E+A G + M G+ P + +++ ++ C + A +++ KG PD
Sbjct: 379 RKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDE 438
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
Y +L+ + R E L EML + M P TY+ L++ G+FS+
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
PN Y +++ + +++A+ + M ++ P +++ +I+ +C++ + AL++
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
EM +KG P+V ++ LI+ ++ E + EM+ G T + LV+ C
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
+G L +++ K L PS Y +L+ LC + A+E++ + +
Sbjct: 311 EGRVDDACGLVLDLLNKRVL--------PSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
Query: 285 LLDPDEVSYSAVISGFRRIRELRKA 309
P ++ + ++ G R+ KA
Sbjct: 363 GQTPCFIACTTLVEGLRKSGRTEKA 387
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREA-EAVLEKMTD----PDCVTYNTLIKAACEAEKNHN 83
G + ++FN+++ +C G L EA + ++MT+ D +YNTL+ A C+ +
Sbjct: 334 GVQPDRITFNSLLA-VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD- 391
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
E+ QM V+ + PN +Y ++I F R +EA+ + M G++
Sbjct: 392 ------LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
SY+ ++S + K +AL++ EM GI DV Y L+ Q + E + +F EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ P TY TL++ Y G + + + F + +V Y+ALI
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEI--------FREFKSAGLRADVVLYSALID 557
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
LC A+ ++ M + + P+ V+Y+++I F R
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 34/303 (11%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKL--REAEAVLEKM----TDPDCVTYNTLIKAAC------ 76
G LV++NAV+ CG+G + ++ ++M PD +T+N+L+ A C
Sbjct: 298 GLRPNLVTYNAVID-ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLW 355
Query: 77 EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
EA +N L+ +M R + + +Y +++ C +++ A IL M K
Sbjct: 356 EAARN------------LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
+ P+ SYS +I F K +AL + EM GI D +Y L+ + R EA
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 197 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 256
D+ +EM G+ TY+ L+ Y +G++ +V + E+ ++ L P+L+
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL--------PNLL 515
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
TY+ LI G EA+EI R L D V YSA+I + + A L EM
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 317 DQK 319
++
Sbjct: 576 TKE 578
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACE 77
+R + G +K +V++NA++ +GK E + V +M P+ +TY+TLI
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG--- 523
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
++ Y +E++ + L + Y ++I C V AV ++ M ++G
Sbjct: 524 ----YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 138 LSPHADSYSRIISRFCKNKEMGKALE 163
+SP+ +Y+ II F ++ M ++ +
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSAD 605
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 33/310 (10%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKM---TDPDCVTYNTLIKAACEAEKNHNPSI 86
T+ + +FN ++ LC G ++E EA+L +M PD T+N L C +P
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVR---DPK- 285
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLS---PHAD 143
+ ++L +M P TY + I FC V+EA + M KG + P A
Sbjct: 286 ---KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ +I KN + + E+ M+ G PDV Y +I+ +C ++ EA EM
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+G P TY+ + C + + L +++ + +PS+ TYN LI
Sbjct: 403 SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE--------SRCAPSVQTYNMLIS 454
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 323
PD A M + D +Y A+I+G + + +A KE C+
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING---LFDCHRA---------KEACF 502
Query: 324 PLDQDTNESL 333
L++ N+ L
Sbjct: 503 LLEEVVNKGL 512
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYH---QMCVRELSPNETTYRSMIRLFCD 119
PD TY +I+ C AEK + E Y +M + P+ TY +R+ C+
Sbjct: 374 PDVSTYKDVIEGMCMAEK----------VDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE 423
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
+ +EA+ + M E +P +Y+ +IS F + + A EM + DV
Sbjct: 424 NRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVET 483
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
Y +I L R EA L +E++ +G+ R +D+ +
Sbjct: 484 YCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 19/288 (6%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
++N+V+ L EG+ + V +M + PD +TY+ LI + + +N +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSA------ 252
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ L+ +M + P E Y +++ ++ +VE+A+ + M G SP +Y+ +I
Sbjct: 253 -IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
K + +A +ML G+ PDV L+ +L R+ E ++F EM + +P
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
+Y+T+++A F H+ + + F S SPS TY+ LI G C R
Sbjct: 372 TVVSYNTVIKAL-----FESKAHVSE--VSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
++AL +L M E P +Y ++I+ + + A EL E+ +
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 18/295 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G +V N ++ L G++ E V +M P V+YNT+IKA E+ K H
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES-KAHVS 391
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + +M +SP+E TY +I +C NRVE+A+ +L M EKG P +
Sbjct: 392 EVS-----SWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y +I+ K K A E+ E+ + Y ++I+ +L EA DLF EM
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G P Y+ L+ G ++ L ++ + G + ++N +++G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG--------CRADINSHNIILNG 558
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
P A+E+ + + PD V+Y+ ++ F +A + EM K
Sbjct: 559 FARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 124/316 (39%), Gaps = 62/316 (19%)
Query: 64 DCVTYNTLIKAACEAE-------------KNHNPSIPYVRIVEL---------------- 94
DC TY TLI+ EA +N S+ + EL
Sbjct: 125 DCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSV 184
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG-LSPHADSYSRIISRFC 153
++Q R+ P +TY S+I + + E+ + M +G P +YS +IS +
Sbjct: 185 FYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYE 244
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
K A+ + EM D + P Y L+ + ++ +A DLF+EM G SP
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVY 304
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------------------TSFS-- 252
TY L++ G + + ++++ G P V FS
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Query: 253 ------PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD---PDEVSYSAVISGFRRI 303
P++V+YN +I L F+ E+ +M D P E +YS +I G+ +
Sbjct: 365 GMWRCTPTVVSYNTVIKAL--FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 304 RELRKAFELKLEMDQK 319
+ KA L EMD+K
Sbjct: 423 NRVEKALLLLEEMDEK 438
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V+L+++M + P+ Y +++ + EA +LR M E G +S++ I++
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
F + +A+EM + GI PD Y L+ H EA + +EM +G
Sbjct: 559 FARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEV 238
TY ++++A V H +D+V
Sbjct: 619 AITYSSILDA------VGNVDHEKDDV 639
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 36 SFNAVVKRLCGE-GKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
SFN V+ C G REAE V +M + D V+Y+++I +C ++ +
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI--SC-----YSKGGSLNK 320
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE-KGLSPHADSYSRII 149
+++L+ +M + P+ Y +++ + V EA +++ M E KG+ P+ +Y+ +I
Sbjct: 321 VLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLI 380
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
CK ++ +A ++ EML+KG+FP + Y +++L R E +L +M G
Sbjct: 381 KPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCE 437
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P TY L+ C +F V L DE+ +K + P L +Y +IHGL
Sbjct: 438 PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK--------TVGPDLSSYIVMIHGLFLNG 489
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+ +EA + M + + P+E + S F
Sbjct: 490 KIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 23/294 (7%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP---DCVTYNTLIKAACEAEKNHNPSIP 87
E G+ F +++ LC + +A ++ D D ++N ++ C I
Sbjct: 229 EMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNV-------IG 281
Query: 88 YVRIVE-LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
R E ++ +M + + +Y SMI + + + + + M ++ + P Y+
Sbjct: 282 SPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN 341
Query: 147 RIISRFCKNKEMGKALE-MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
++ K + +A MK +KGI P+V Y LI+ LC R+ EA+ +F EML
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+G+ P RTY + GE +VF L ++ + G P++ TY LI L
Sbjct: 402 KGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKMGC--------EPTVETYIMLIRKL 450
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
C ++ D L + M E + PD SY +I G ++ +A+ EM K
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 55/287 (19%)
Query: 88 YVRIVELYHQMC------------------VRELSP---NETTYRSMIRLFCDRNRVEEA 126
YVR V YH M +R+ SP N T MIR +C + V +A
Sbjct: 157 YVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKA 216
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
+ L D + ++S C+ K + A + DK F D ++ +++
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVLNG 275
Query: 187 LCHQ-RRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
C+ EA ++ EM G+ +Y +++ Y G +KV L D + ++ P
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 246 ---------------YYVT-------------SFSPSLVTYNALIHGLCFFQRPDEALEI 277
+V+ P++VTYN+LI LC ++ +EA ++
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 278 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
M E L P +Y A + R +R + FEL +M +K C P
Sbjct: 396 FDEMLEKGLFPTIRTYHAFM---RILRTGEEVFELLAKM-RKMGCEP 438
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 130/306 (42%), Gaps = 38/306 (12%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++NA++K G L++AE+++ +M PD TY+ LI A A + + I
Sbjct: 341 AYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI----- 395
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ +M ++ PN + ++ F DR ++ +L+ M G+ P Y+ +I
Sbjct: 396 --VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
F K + A+ ML +GI PD + LI C R + A ++F+ M RG P
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------- 249
TY+ ++ +Y + + + L ++ +G LP VT
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Query: 250 -----SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
PS YNALI+ ++A+ R M L P ++ +++I+ F R
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 305 ELRKAF 310
+AF
Sbjct: 634 RDAEAF 639
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 19/294 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNH 82
A G + +++ L G+ EAEA+ E++ P YN L+K +
Sbjct: 297 ATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVK----- 351
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ P + +M R +SP+E TY +I + + R E A +L+ M + P++
Sbjct: 352 --TGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNS 409
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+SR+++ F E K ++ EM G+ PD Y ++I L A F
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR 469
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
ML G+ P T++TL++ +C G + + + ++G L P TYN +I
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL--------PCATTYNIMI 521
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+ +R D+ +L M + P+ V+++ ++ + + A E EM
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 8/214 (3%)
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
+ +M + P+ T+ ++I C R A + M +G P A +Y+ +I+ +
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
+ + +M +GI P+V + L+ + R +A + +EM G+ P
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 274
Y+ L+ AY +G L ++ + F PSL+ N+LI+ +R EA
Sbjct: 587 YNALINAYAQRG-------LSEQAVN-AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 308
+L+ M E + PD V+Y+ ++ R+ + +K
Sbjct: 639 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNP 84
G E V++N ++ C G+ AE + E M C+ TYN +I + + E+
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER---- 529
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ + L +M + + PN T+ +++ ++ R +A+ L M GL P +
Sbjct: 530 ---WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I+ + + +A+ M G+ P + A LI RR EA + Q M
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
G+ P TY TL++A +F KV + +E+I G P
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 17/279 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+++NA++ + +A ++ KM D V Y+ +I++ + K I V
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK-----IDSVM 252
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
++ LY ++ +L + +I F +A+ +L + GLS + IIS
Sbjct: 253 LLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+ +A + E+ GI P AY L++ L +A + EM RG+SP
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY L++AY G + + E ++ G P+ ++ L+ G
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKE-MEAG-------DVQPNSFVFSRLLAGFRDRGE 424
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+ ++L+ M + + PD Y+ VI F + L A
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 11/174 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
+ G +V+ +V G+ +A LE+M P YN LI A + +
Sbjct: 542 SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ V + M L P+ S+I F + R EA +L+ M E G+ P
Sbjct: 602 -------QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
+Y+ ++ + + K + EM+ G PD A +L L + ++ L A
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
F +++R +++A VL++M +PD + L+ A C+ S + +
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E + PN + S++ +C ++ EA +L M E GL P ++ ++S +
Sbjct: 230 E--------KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH-QRRLLEARDLFQEMLLRGMSPG 211
+M A ++ +M +G P+V+ Y +LIQ LC ++R+ EA +F EM G
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY L+ +C G K + + D++ +KG + PS VTY ++ ++
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVM--------PSQVTYMQIMVAHEKKEQF 393
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
+E LE++ M PD + Y+ VI ++ E+++A L EM+
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 9/235 (3%)
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ VE+ +M L P+E + ++ C V+EA + M EK P+ ++ ++
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLL 243
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+C+ ++ +A E+ V+M + G+ PD+ + L+ H ++ +A DL +M RG
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFE 303
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y L++A C + DE + + F+ +VTY ALI G C +
Sbjct: 304 PNVNCYTVLIQALC------RTEKRMDEAM-RVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
D+ +L M + + P +V+Y ++ + + + EL +E ++ C P
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL-IEKMKRRGCHP 410
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
AG E +V F ++ GK+ +A ++ M +P+ Y LI+A C EK +
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMD 324
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ VE+ C ++ TY ++I FC +++ +L M +KG+ P
Sbjct: 325 EAMRV--FVEMERYGCEADI----VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y +I+ K ++ + LE+ +M +G PD+ Y ++I+L C + EA L+ EM
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G+SPG T+ ++ + +G + + E++ +G +P T +L++
Sbjct: 439 EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS------APQYGTLKSLLN 492
Query: 264 GL 265
L
Sbjct: 493 NL 494
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHN 83
A E + FN ++ L G+L EA ++E+ + P VTYN+L+K C+A
Sbjct: 314 AEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPG 373
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
S ++ M R + P TTY + F N+ EE + + + E G SP
Sbjct: 374 AS-------KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRL 426
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y I+ C++ ++ A+++ EM ++GI PD+ +LI LLC L EA + F
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 204 LLRGMSPGGRTYDTLVEAYCLKG 226
+ RG+ P T+ + KG
Sbjct: 487 VRRGIIPQYITFKMIDNGLRSKG 509
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAAC---------------- 76
FN ++ KL++AE + E+M P VTY TLI+ C
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 77 --EAEKNH---NPSIPYV----RIVE---LYHQMCVRELSPNETTYRSMIRLFCDRNRVE 124
E E N NP I + R+ E + + V E P TY S+++ FC +
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 125 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 184
A IL++M +G+ P +Y+ F K+ + + + + ++++ G PD Y L++
Sbjct: 373 GASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Query: 185 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
++LC +L A + +EM RG+ P T L+ C + F D +++G +
Sbjct: 433 KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII 492
Query: 245 PYYVT 249
P Y+T
Sbjct: 493 PQYIT 497
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 22/275 (8%)
Query: 44 LCGEGKLREAEAVLEKMTD-------PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
LC EG +REA LE++ P +N L+ + K + +L+
Sbjct: 222 LCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRK-------LKQAEKLWE 274
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
+M + P TY ++I +C RV+ A+ +L M + + ++ II +
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 216
+ +AL M P + Y L++ C L A + + M+ RG+ P TY+
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 217 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 276
+ + + + +L ++I+ G SP +TY+ ++ LC + A++
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGH--------SPDRLTYHLILKMLCEDGKLSLAMQ 446
Query: 277 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
+ + M +DPD ++ + +I R+ L +AFE
Sbjct: 447 VNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 113 MIRLFCDRNRVEEAVGILRLMA---EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
++ C V EA L + + P ++ +++ + +++++ +A ++ EM
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
+ P V YG LI+ C RR+ A ++ +EM + M ++ +++ G S
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 289
+ + + ++V P++VTYN+L+ C A +IL+ M +DP
Sbjct: 338 EALGMMER--------FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPT 389
Query: 290 EVSYSAVISGFRRIRELRKAFELKLEM 316
+Y+ F + + + L ++
Sbjct: 390 TTTYNHFFKYFSKHNKTEEGMNLYFKL 416
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P T+ L+ AC A P + + + M L P++ T +R C+ R
Sbjct: 120 PGRSTFLILLSHACRA-----PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYG 181
V+EA +++ + EK P +Y+ ++ CK K++ E EM D + PD+ ++
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+LI +C+ + L EA L ++ G P Y+T+++ +C + S+ + ++ ++
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
G P +TYN LI GL R +EA L+ M + +PD +Y+++++G
Sbjct: 295 GV--------EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 302 R 302
R
Sbjct: 347 R 347
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G E V+ + V+ LC G++ EA+ +++++T+ PD TYN L+K C+ + H
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH-- 211
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ Y + E+ V+ P+ ++ +I C+ + EA+ ++ + G P
Sbjct: 212 -VVYEFVDEMRDDFDVK---PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ I+ FC + +A+ + +M ++G+ PD Y LI L R+ EAR + M+
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 205 LRGMSPGGRTYDTLVEAYCLKG 226
G P TY +L+ C KG
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKG 349
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 33/306 (10%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEA 78
R A+G + ++ ++K L ++ + +L+ M P+ V YNTL+ A C+
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
K R L +M PN+ T+ +I +C+ ++ +++ +L G
Sbjct: 231 GKVG-------RARSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
P + ++++ C + +ALE+ + KG DV A L++ C ++ A+
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQR 339
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
F EM +G P TY+ L+ YC G F + + T+
Sbjct: 340 FFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDT--------FNDMKTDAIRWNFATF 391
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS------YSAVISGFRRIRELRKAFEL 312
N LI GL R D+ L+IL EM+ D D V Y+ VI GF + A E
Sbjct: 392 NTLIRGLSIGGRTDDGLKIL----EMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEF 447
Query: 313 KLEMDQ 318
L+M++
Sbjct: 448 LLKMEK 453
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 23/300 (7%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
+ G + +V+ N +VK C GK+R A+ +M P+ TYN LI C+
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLD 370
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ ++ ++ M + N T+ ++IR R ++ + IL +M + A
Sbjct: 371 SA-------LDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGA 423
Query: 143 --DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
D Y+ +I F K ALE ++M + +FP + LC + + + + +
Sbjct: 424 RIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAY 481
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 260
+M+ G P L+ Y G+ + L ++++ +G+LP T +NA
Sbjct: 482 DQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSST--------FNA 533
Query: 261 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
+I G C + ++ + M E PD SY+ ++ +++KA+ L M +K
Sbjct: 534 VIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKS 593
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 42/267 (15%)
Query: 94 LYHQMCVRE-----------------LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
L+H++CV L P++ + ++IR F ++ + ++ L+++
Sbjct: 82 LFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF 141
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
G+ P ++ I+ K +++ A E +M+ GI DV+ YG+L++ L R+ +
Sbjct: 142 GIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY--------- 246
L Q M G++P Y+TL+ A C G+ + L E+ + + +
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCN 260
Query: 247 --------------YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 292
+ F P +VT ++ LC R EALE+L + D V+
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 293 YSAVISGFRRIRELRKAFELKLEMDQK 319
+ ++ G+ + ++R A +EM++K
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERK 347
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV------TYNTLIKAACEAEKNHNPSIP 87
+FN +++ L G+ + +LE M D D V YN +I + + +
Sbjct: 388 FATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDA--- 444
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+E +M +L P + C++ +++ M +G P
Sbjct: 445 ----LEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHC 498
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
+I R+ ++ ++ ++LE+ +M+ +G P + +I C Q +++ ++M RG
Sbjct: 499 LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERG 558
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
P +Y+ L+E C+KG+ K + L +++K +P
Sbjct: 559 CVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP 596
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 44 LCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMC 99
LC +G + + + ++M P + + LI + K +EL + M
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES-------LELINDMV 520
Query: 100 VRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMG 159
R P +T+ ++I FC +++V + + MAE+G P +SY+ ++ C ++
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 160 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
KA + M++K I PD + L+ L Q+ + Q+++
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLMFCL-SQKTAIHVNSSLQDII 624
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 62 DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRN 121
+PD TYN +IK CE+ + +M + + PN +++ MI F +
Sbjct: 184 EPDLETYNRMIKVFCESGS-------ASSSYSIVAEMERKGIKPNSSSFGLMISGFYAED 236
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
+ +E +L +M ++G++ +Y+ I CK K+ +A + ML G+ P+ Y
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
LI C++ EA+ LF+ M+ RG P Y TL+ C G+F L E ++K
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
++P SFS +L++GL + +EA E++ + E
Sbjct: 357 NWVP----SFS----IMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 20/258 (7%)
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEA 126
+ N L+ A A+ Y+ + ++Y + P+ TY MI++FC+ +
Sbjct: 153 SLNALLFACLVAKDYKEAKRVYIEMPKMYG------IEPDLETYNRMIKVFCESGSASSS 206
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFC---KNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
I+ M KG+ P++ S+ +IS F K+ E+GK L M M D+G+ V Y +
Sbjct: 207 YSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM---MKDRGVNIGVSTYNIR 263
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
IQ LC +++ EA+ L ML GM P TY L+ +C + +F + L ++ +G
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG- 322
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
P Y LI+ LC + AL + + E P ++++G +
Sbjct: 323 -------CKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKD 375
Query: 304 RELRKAFELKLEMDQKET 321
++ +A EL ++ +K T
Sbjct: 376 SKVEEAKELIGQVKEKFT 393
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 46/179 (25%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G G+ ++N ++ LC K +EA+A+L+ M P+ VTY+ LI
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG---------- 301
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
FC+ + EEA + ++M +G P ++
Sbjct: 302 --------------------------------FCNEDDFEEAKKLFKIMVNRGCKPDSEC 329
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
Y +I CK + AL + E ++K P L+ L ++ EA++L ++
Sbjct: 330 YFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+ ++ C + AEA++ +M D Y+T++ + + R+
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E +P TY +I L+ ++ +A+ + R+M E+G+ + +YS +I+ F
Sbjct: 477 EC-------GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
K K+ A + +M+ +G+ PDV Y +I C + A +EM P
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTT 589
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
RT+ ++ Y G+ + + D + + G + P++ T+N LI+GL ++ +
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV--------PTVHTFNGLINGLVEKRQME 641
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
+A+EIL M + +E +Y+ ++ G+ + + KAFE
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 38/301 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + ++ +N ++ CG G + A +++M P T+ +I +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG-------YAK 601
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
S R +E++ M P T+ +I ++ ++E+AV IL M G+S + +
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y++I+ + + GKA E + ++G+ D+ Y L++ C R+ A + +EM
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP--YYVTSF----------- 251
R + Y+ L++ + +G+ + L ++ ++G P + TSF
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 252 --------------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
P++ TY LI G P++AL M M + PD+ Y ++
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Query: 298 S 298
+
Sbjct: 842 T 842
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+ ++ M + P+ Y ++I FC ++ A+ ++ M + P ++
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
II + K+ +M ++LE+ M G P VH + LI L +R++ +A ++ EM L G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+S TY +++ Y G+ K F + +G + TY AL+ C
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG--------LDVDIFTYEALLKACCK 706
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
R AL + + M + + Y+ +I G+ R ++ +A +L +M +KE P
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM-KKEGVKP 762
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 25/267 (9%)
Query: 55 AVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMI 114
+ EK++ P + ++K H R E + +M R ++P Y S+I
Sbjct: 299 SAFEKISKPSRTEFGLMVKFYGRRGDMH-------RARETFERMRARGITPTSRIYTSLI 351
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK--NKEMGKALEMKVEMLDKG 172
+ ++EA+ +R M E+G+ +YS I+ F K + E + + + K
Sbjct: 352 HAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT 411
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
+ + YG +I C + A L +EM G+ Y T+++ Y +
Sbjct: 412 LNASI--YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTM-------- 461
Query: 233 HLQDEVIQKGFLPY---YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 289
+ DE +KG + + F+P++VTY LI+ + +ALE+ R M E + +
Sbjct: 462 -VADE--KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Query: 290 EVSYSAVISGFRRIRELRKAFELKLEM 316
+YS +I+GF ++++ AF + +M
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDM 545
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 101/219 (46%), Gaps = 9/219 (4%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
N + Y +I C +E A ++R M E+G+ Y ++ + + K L +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
+ + G P V YG LI L ++ +A ++ + M G+ +TY ++ +
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
+++ F + ++++++G P ++ YN +I C D A++ ++ M ++
Sbjct: 533 KDWANAFAVFEDMVKEG--------MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
P ++ +I G+ + ++R++ E+ +M ++ C P
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEV-FDMMRRCGCVP 622
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 23/287 (8%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVR 90
V V LC + A + +EKM + C +YN++IK C ++N +
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK--CLFQENIIEDLA--S 533
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+V + ++ + P+ TY ++ C +N + A I+ M E GL P YS II
Sbjct: 534 LVNIIQEL---DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG 590
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
K + +A E +ML+ GI PD AY ++I R+ EA +L +E++ + P
Sbjct: 591 SLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRP 650
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
TY L+ + G K D++++ G SP++V Y ALI F ++
Sbjct: 651 SSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG--------LSPNVVLYTALIGH--FLKK 700
Query: 271 PD--EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
D + + M E + D ++Y ++SG R +K ++ +E
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVE 747
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
N ++ C G+L EA LE M P+ VTY L+K+ EA + ++
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA-------ID 850
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L+ P++ Y ++++ CD R +A+ ++ M + G++P+ DSY +++ C
Sbjct: 851 LFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
++ +A+++ +M I+P + LI +LC +++L EAR LF M+ G S
Sbjct: 908 YSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 140/365 (38%), Gaps = 81/365 (22%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTY----NTLIKAACEAEK 80
G + +++++ L +G++ EAE KM + PD + Y NT + E
Sbjct: 577 GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEA 636
Query: 81 NH-----------NPSIPYVRIVELYHQMCVRE-------------LSPNETTYRSMIRL 116
N S Y ++ + +M + E LSPN Y ++I
Sbjct: 637 NELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGH 696
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHADSY-------------------------SRIISR 151
F + + + + LM E + +Y +++ R
Sbjct: 697 FLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQR 756
Query: 152 FCKNKEM-----------GKALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 199
+ K + K+ M+V + K I P+++ + +I C RL EA +
Sbjct: 757 LIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNH 816
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 259
+ M G+ P TY L++++ G+ L + T+ P V Y+
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL-----------FEGTNCEPDQVMYS 865
Query: 260 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
L+ GLC F+RP +AL ++ M + ++P++ SY ++ R +A ++ +M
Sbjct: 866 TLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAAL 925
Query: 320 ETCWP 324
+ WP
Sbjct: 926 DI-WP 929
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 13/285 (4%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSI 86
A+G S + VV LC + + EA E++ + + K + H
Sbjct: 159 ASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLN 218
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
+ +++ M L N Y+S+ FC R EA + M G Y+
Sbjct: 219 EAIGMLDTLCGMTRMPLPVN--LYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYT 276
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ +CK+ M A+ + + M+++ D + LI L + R +F +M+ +
Sbjct: 277 CLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKK 336
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
G+ TY ++ +YC +G + L+ V G S ++ Y LI G
Sbjct: 337 GVQSNVFTYHIMIGSYCKEGNVD--YALRLFVNNTG-----SEDISRNVHCYTNLIFG-- 387
Query: 267 FFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
F+++ D+A+++L M + + PD ++Y ++ + EL+ A
Sbjct: 388 FYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYA 432
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 53/232 (22%)
Query: 44 LCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIP---YVRIVE--- 93
C G EAEA+ + M D V Y L+K C K++N ++ Y+R+VE
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYC---KDNNMTMAMRLYLRMVERSF 303
Query: 94 -------------------------LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVG 128
++ QM + + N TY MI +C V+ A
Sbjct: 304 ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA-- 361
Query: 129 ILRLM----AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 184
LRL + +S + Y+ +I F K M KA+++ + MLD GI PD Y +L+
Sbjct: 362 -LRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
Query: 185 QLL--CHQRRLLEARDLFQEMLLRGMSPGGRTYDTL----VEAYCLKGEFSK 230
++L CH+ L A + Q +L G D L V+ L GE ++
Sbjct: 421 KMLPKCHE--LKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR 470
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 141/349 (40%), Gaps = 64/349 (18%)
Query: 1 MKLLLR-VSSTVATLKTFWNVPIRGFTAAGT-EKGLVSFNAVVKRLCGEGKLREAEAVLE 58
M+L LR V + +N I GF G +KG V F+ ++K
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIK---------------- 335
Query: 59 KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFC 118
K + TY+ +I + C+ E N + ++ + ++S N Y ++I F
Sbjct: 336 KGVQSNVFTYHIMIGSYCK-EGNVDYALRL-----FVNNTGSEDISRNVHCYTNLIFGFY 389
Query: 119 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG--IFP- 175
+ +++AV +L M + G+ P +Y ++ K E+ A+ + +LD G I P
Sbjct: 390 KKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP 449
Query: 176 ------------------------DVHAYGLLI--QLLCHQRRLLEARDLFQEMLLRGMS 209
++ A GL + LC QR + A ++M+ G +
Sbjct: 450 VIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCT 509
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P +Y+++++ + + L + +IQ+ F P + TY +++ LC
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVN-IIQE-------LDFVPDVDTYLIVVNELCKKN 561
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGF---RRIRELRKAFELKLE 315
D A I+ M E+ L P YS++I R+ E + F LE
Sbjct: 562 DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 20/216 (9%)
Query: 32 KGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEK-----NHNPSI 86
K LVS + + + E ++K P+ +NT+I C A + NH S+
Sbjct: 761 KPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESM 820
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
IV PN TY +++ + +E A+ L P YS
Sbjct: 821 QKEGIV------------PNLVTYTILMKSHIEAGDIESAID---LFEGTNCEPDQVMYS 865
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ C K AL + +EM GI P+ +Y L+Q LC+ R +EA + ++M
Sbjct: 866 TLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAAL 925
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+ P + L+ C + + + L ++Q G
Sbjct: 926 DIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 34 LVSFNAVVK---RLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSI 86
LV+ N V K R G G+ EA + +++ + + + N L+ C+ ++ +
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR-----V 206
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
R+V L + ++PN T+ I +C NRVEEA+ ++ M G P SY+
Sbjct: 207 EQARVVLLQLK---SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 263
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
II +C+ E K EM EM G P+ Y ++ L Q+ EA + M
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 207 GMSPGGRTYDTLVEAYCLKG---EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G P Y+ L+ G E +VF ++ +P S + S TYN++I
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVE--------MPELGVSINTS--TYNSMIA 373
Query: 264 GLCFFQRPDEALEILRGM-PEMLLDPDEVSYSAVI-SGFRR 302
C D+A+E+L+ M L +PD +Y ++ S F+R
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAAC------ 76
A G+ +++ ++ L + + EA V +M PD + YN LI
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 77 EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
EAE+ +P + + S N +TY SMI ++C + ++A+ +L+ M
Sbjct: 347 EAERVFRVEMPELGV------------SINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 137 GL-SPHADSYSRIISRFCKNK----EMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQ 190
L +P +Y ++ R C + E+GK L+ EM+ K D Y LIQ LC
Sbjct: 395 NLCNPDVHTYQPLL-RSCFKRGDVVEVGKLLK---EMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 191 RRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
A LF+EM+ + ++P RT L+E
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 34 LVSFNAVVK---RLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSI 86
LV+ N V K R G G+ EA + +++ + + + N L+ C+ ++ +
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR-----V 206
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
R+V L + ++PN T+ I +C NRVEEA+ ++ M G P SY+
Sbjct: 207 EQARVVLLQLK---SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 263
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
II +C+ E K EM EM G P+ Y ++ L Q+ EA + M
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 207 GMSPGGRTYDTLVEAYCLKG---EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G P Y+ L+ G E +VF ++ +P S + S TYN++I
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVE--------MPELGVSINTS--TYNSMIA 373
Query: 264 GLCFFQRPDEALEILRGM-PEMLLDPDEVSYSAVI-SGFRR 302
C D+A+E+L+ M L +PD +Y ++ S F+R
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAAC------ 76
A G+ +++ ++ L + + EA V +M PD + YN LI
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 77 EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
EAE+ +P + + S N +TY SMI ++C + ++A+ +L+ M
Sbjct: 347 EAERVFRVEMPELGV------------SINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 137 GL-SPHADSYSRIISRFCKNK----EMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQ 190
L +P +Y ++ R C + E+GK L+ EM+ K D Y LIQ LC
Sbjct: 395 NLCNPDVHTYQPLL-RSCFKRGDVVEVGKLLK---EMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 191 RRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
A LF+EM+ + ++P RT L+E
Sbjct: 451 NMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 20/286 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
F +V+R +++A VL++M +PD + L+ A C+ + +
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA------- 238
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+L+ M +R N + S++ +C ++ EA +L M E G P Y+ ++S +
Sbjct: 239 KLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
+M A ++ +M +G P+ + Y +LIQ LC R+ EA +F EM
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
TY LV +C G+ K + + D++I+KG +P S +TY ++ + +
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP--------SELTYMHIMVAHEKKESFE 409
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
E LE++ M ++ PD Y+ VI ++ E+++A L EM++
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 18/275 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLE--KMTDPDCVTYNT-LIKAACEAEKNHNPS 85
G E F ++ LC G +++A + E +M P + Y T L+ C K
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAK 272
Query: 86 IPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
YV + QM P+ Y +++ + + ++ +A +LR M +G P+A+ Y
Sbjct: 273 --YVLV-----QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+ +I CK M +A+++ VEM DV Y L+ C ++ + + +M+
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+G+ P TY ++ A+ K F + L +++ Q + P + YN +I
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ--------IEYHPDIGIYNVVIRLA 437
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
C EA+ + M E L P ++ +I+G
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
AG E +V + ++ GK+ +A +L M +P+ Y LI+A C+ ++
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++++ +M E + TY +++ FC ++++ +L M +KGL P
Sbjct: 341 A-------MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y I+ K + + LE+ +M PD+ Y ++I+L C + EA L+ EM
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Query: 204 LLRGMSPGGRTYDTLVEAYCLKG 226
G+SPG T+ ++ +G
Sbjct: 454 EENGLSPGVDTFVIMINGLASQG 476
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ +E+ +M P+E + ++ C V++A + M + + ++ ++
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLL 259
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+C+ +M +A + V+M + G PD+ Y L+ + ++ +A DL ++M RG
Sbjct: 260 YGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE 319
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y L++A C KV +++ + K F+ +VTY AL+ G C +
Sbjct: 320 PNANCYTVLIQALC------KVDRMEEAM--KVFVEMERYECEADVVTYTALVSGFCKWG 371
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
+ D+ +L M + L P E++Y ++ + + EL +M Q E
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKG---LSPHADSYSRIISRFCKNKEMGKALEMK 165
Y+SM+++ + G++ M ++ + P + + ++ RF + KA+E+
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEP--ELFVVLVQRFASADMVKKAIEVL 206
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
EM G PD + +G L+ LC + +A LF++M +R R + +L+ +C
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRV 265
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFSPSLVTY 258
G+ + ++ ++ + GF P V F P+ Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
LI LC R +EA+++ M + D V+Y+A++SGF + ++ K +
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE 77
+R G E + +++ LC ++ EA V +M + D VTY L+ C+
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
K I + M + L P+E TY ++ + EE + ++ M +
Sbjct: 370 WGKIDKCYI-------VLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
P Y+ +I CK E+ +A+ + EM + G+ P V + ++I L Q LLEA
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482
Query: 198 DLFQEMLLRGM 208
D F+EM+ RG+
Sbjct: 483 DHFKEMVTRGL 493
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSI 86
E +V++ A+V C GK+ + VL+ M P +TY ++ A H
Sbjct: 354 EADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA-------HEKKE 406
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
+ +EL +M E P+ Y +IRL C V+EAV + M E GLSP D++
Sbjct: 407 SFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFV 466
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG---LLIQLLCHQRRLLEARDLFQEM 203
+I+ + +A + EM+ +G+F V YG LL+ + ++L A+D++ +
Sbjct: 467 IMINGLASQGCLLEASDHFKEMVTRGLFS-VSQYGTLKLLLNTVLKDKKLEMAKDVWSCI 525
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-----EVIQKGFLP 245
S G + L + FSK + + E+I+ F+P
Sbjct: 526 ----TSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMP 568
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 22/290 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAV--LEKMTD----PDCVTYNTLIKAACEAEKNHNPSIP 87
L+SFN ++ G L AV L+ + + PD +TYNTL+ +AC + N + +
Sbjct: 260 LISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL-SACSRDSNLDGA-- 316
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
V+++ M P+ TY +MI ++ EA + + KG P A +Y+
Sbjct: 317 ----VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNS 372
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML-LR 206
++ F + + K E+ +M G D Y +I + Q +L A L+++M L
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
G +P TY L+++ + L E++ G P+L TY+ALI G
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI--------KPTLQTYSALICGYA 484
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+ +EA + M PD ++YS ++ R E RKA+ L +M
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
L ++NA++ G EAE + ++ PD VTYN+L+ A E+N
Sbjct: 332 LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR-ERNTE------ 384
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLS---PHADSYS 146
++ E+Y QM +E TY ++I ++ + +++ A+ + + M KGLS P A +Y+
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYT 442
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
+I K +A + EMLD GI P + Y LI + EA D F ML
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
G P Y +++ E K + L ++I G P Y Y +I GL
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY--------TLYELMILGLM 554
Query: 267 FFQRPDEALEILRGMPEML-LDPDEVSYSAVISG 299
R D+ + +R M E+ ++P E+S S ++ G
Sbjct: 555 KENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKG 587
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 21/294 (7%)
Query: 18 WN---VPIRGFTAAGTEKG--LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTY 68
WN + + FT A G + +NA++ GK +A+ +++ M PD +++
Sbjct: 204 WNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISF 263
Query: 69 NTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVG 128
NTLI A ++ P++ VEL + L P+ TY +++ + ++ AV
Sbjct: 264 NTLINARLKS-GGLTPNLA----VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVK 318
Query: 129 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 188
+ M P +Y+ +IS + + +A + +E+ KG FPD Y L+
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFA 378
Query: 189 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 248
+R + ++++Q+M G TY+T++ Y +G+ L ++ KG +
Sbjct: 379 RERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM--KG-----L 431
Query: 249 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ +P +TY LI L R EA ++ M ++ + P +YSA+I G+ +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 15/228 (6%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPD----CVTYNTLIKAACEAEKNH 82
AAG + + +++ LC ++R+AE ++ +M + + +N+++K E
Sbjct: 885 AAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED-- 942
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
Y + V++Y ++ L P+ETTY ++I ++C R EE +++ M GL P
Sbjct: 943 -----YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
D+Y +IS F K K + +A ++ E+L KG+ D Y ++++ +A L Q
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKG---EFSKVF-HLQDEVIQKGFLPY 246
M G+ P T L+ +Y G E KV +L+D ++ LPY
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPY 1105
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 20/272 (7%)
Query: 46 GEGKL-REAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCV 100
G+ KL ++AE+V+ + PD T+N+L+ A + Y R +++ M
Sbjct: 763 GKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG-------CYERARAIFNTMMR 815
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
SP + ++ C R+EE ++ + + G S ++ F + + +
Sbjct: 816 DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFE 875
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
++ M G P + Y ++I+LLC +R+ +A + EM ++++++
Sbjct: 876 VKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLK 935
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 280
Y ++ K + + + G P TYN LI C +RP+E +++
Sbjct: 936 MYTAIEDYKKTVQVYQRIKETG--------LEPDETTYNTLIIMYCRDRRPEEGYLLMQQ 987
Query: 281 MPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
M + LDP +Y ++IS F + + L +A +L
Sbjct: 988 MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQL 1019
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 139/366 (37%), Gaps = 63/366 (17%)
Query: 5 LRVSSTVATLKTFWNVPIRGFTAAGT-EKGLVSFNAVVK---------------RLCGEG 48
LR S LKT WN + + G E+ FN +++ LC +G
Sbjct: 778 LRQSGRTPDLKT-WNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Query: 49 KLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNET 108
+L E V+E++ D + I +A + ++Y M P
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN---IFEVKKIYSSMKAAGYLPTIR 893
Query: 109 TYRSMIRLFCDRNRVEEA-----------------------------------VGILRLM 133
YR MI L C RV +A V + + +
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI 953
Query: 134 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
E GL P +Y+ +I +C+++ + + +M + G+ P + Y LI Q+ L
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 194 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 253
+A LF+E+L +G+ Y T+++ G SK L + G P
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG--------IEP 1065
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 313
+L T + L+ P EA ++L + + ++ + YS+VI + R ++ E
Sbjct: 1066 TLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERL 1125
Query: 314 LEMDQK 319
LEM ++
Sbjct: 1126 LEMKKE 1131
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y +M+ ++ + +A ++ M ++G P S++ +I+ + K G + VE+L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN--ARLKSGGLTPNLAVELL 285
Query: 170 D----KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
D G+ PD Y L+ L A +F++M P TY+ ++ Y
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G ++ L E+ KGF P VTYN+L++ + ++ E+ + M +M
Sbjct: 346 GLAAEAERLFMELELKGFFP--------DAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
DE++Y+ +I + + +L A +L +M
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 18/237 (7%)
Query: 88 YVRIVELYHQMCVREL-SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
+ R +E++ + +R SPN +++ + N+ AV I AE + Y+
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFT-RAEPTVGDRVQVYN 229
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE--ARDLFQEML 204
++ + ++ + KA E+ M +G PD+ ++ LI L A +L +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P TY+TL+ A C S+ +L V K F P L TYNA+I
Sbjct: 290 NSGLRPDAITYNTLLSA-C-----SRDSNLDGAV--KVFEDMEAHRCQPDLWTYNAMI-- 339
Query: 265 LCFFQRPDEALEILRGMPEMLLD---PDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+ R A E R E+ L PD V+Y++++ F R R K E+ +M +
Sbjct: 340 -SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL----SPHAD 143
Y +++ + + +E+ +SM+ ++C E A ++ KG SP
Sbjct: 697 YAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPM-- 754
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI----QLLCHQRRLLEARDL 199
Y+ II + K K KA + + G PD+ + L+ Q C++R AR +
Sbjct: 755 -YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYER----ARAI 809
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
F M+ G SP + + L+ A C+ G +++ + +E+ GF
Sbjct: 810 FNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGF 853
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 19/236 (8%)
Query: 18 WNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVT----YNTLIK 73
W+ P++G E+ S+ ++++ LCG GK EA +L K+ + VT YNT+
Sbjct: 399 WSFPVKG------ERD--SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 74 AACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLM 133
A + ++ I +L+ +M SP+ TY +I F V+EA+ I +
Sbjct: 451 ALGKLKQ-------ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 134 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
P SY+ +I+ KN ++ +A EM +KG+ PDV Y L++ R+
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 194 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
A LF+EML++G P TY+ L++ G ++ L ++ Q+G P +T
Sbjct: 564 EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 23/300 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNP 84
G +V +N +++ L + +A V +M + C TY+ L+ N
Sbjct: 300 GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL----------NL 349
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++V L + + + + Y ++R V EA + M + DS
Sbjct: 350 LVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS 409
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y ++ C + +A+EM ++ +KG+ D Y + L +++ DLF++M
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G SP TY+ L+ ++ GE + ++ +E+ + + P +++YN+LI+
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER--------SDCKPDIISYNSLINC 521
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
L DEA + M E L+PD V+YS ++ F + + A+ L EM K C P
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK-GCQP 580
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 21/249 (8%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D YN L+ A + EK +++ M R +E TY MIR +
Sbjct: 237 DIFAYNMLLDALAKDEK----------ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
+EAVG+ M +GL+ + Y+ ++ K K + KA+++ M++ G P+ + Y LL
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
+ LL + +L+ D E+ R M+ G Y LV G S+ L F
Sbjct: 347 LNLLVAEGQLVRL-DGVVEISKRYMTQG--IYSYLVRTLSKLGHVSEAHRL--------F 395
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
+ +Y +++ LC + EA+E+L + E + D + Y+ V S ++
Sbjct: 396 CDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL 455
Query: 304 RELRKAFEL 312
+++ +L
Sbjct: 456 KQISHIHDL 464
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
+Y SM+ C + EA+ +L + EKG+ Y+ + S K K++ ++ +M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
G PD+ Y +LI + EA ++F+E+ P +Y++L+ G+
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
+ E+ +KG +P +VTY+ L+ +R + A + M P
Sbjct: 529 DEAHVRFKEMQEKGL--------NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ V+Y+ ++ + +A +L +M Q+
Sbjct: 581 NIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNP 84
G + ++N ++ G++ EA + E++ DC ++YN+LI KN +
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL---GKNGDV 528
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+VR + +M + L+P+ TY +++ F RVE A + M KG P+ +
Sbjct: 529 DEAHVR----FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
Y+ ++ KN +A+++ +M +G+ PD Y +L +L
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P TY SMI FC ++RV++A +L MA KG SP ++S +I+ +CK K + +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
EM +GI + Y LI C L A+DL EM+ G++P T+ ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 225 KGEFSKVF------------HLQDE 237
K E K F HL+DE
Sbjct: 128 KKELRKAFAILEDLQKSEDHHLEDE 152
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 227
ML IFP Y +I C Q R+ +A+ + M +G SP T+ TL+ YC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 228 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
+ E+ ++G + + VTY LIHG C D A ++L M +
Sbjct: 61 VDNGMEIFCEMHRRGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 288 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
PD +++ +++G +ELRKAF + ++ + E
Sbjct: 113 PDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 145
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 140 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 199
P +Y+ +I FCK + A M M KG PDV + LI C +R+ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 259
F EM RG+ TY TL+ +C G+ L +E+I G P Y +T++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFH 119
Query: 260 ALIHGLCFFQRPDEALEILRGMPE 283
++ GLC + +A IL + +
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+++N+++ C + ++ +A+ +L+ M PD VT++TLI C+A++ N
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG------ 64
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+E++ +M R + N TY ++I FC ++ A +L M G++P ++ +++
Sbjct: 65 -MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 151 RFCKNKEMGKALEM 164
C KE+ KA +
Sbjct: 124 GLCSKKELRKAFAI 137
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P +TYN++I C+ ++ + + M + SP+ T+ ++I +C R
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAK-------RMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
V+ + I M +G+ + +Y+ +I FC+ ++ A ++ EM+ G+ PD +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 183 LIQLLCHQRRLLEARDLFQEM 203
++ LC ++ L +A + +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAV----LEKMTDPDCVTYNTLIKAACEAEKNHNP 84
G + G V+ + +V L GK REAE + LEK + D V YNTLIKA EA K
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
S E+Y +M + + TY +MI ++ ++++A+ I GL
Sbjct: 794 S-------EIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKI 846
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ +I + K +M +AL + EM KGI P +Y +++++ R E +L Q M
Sbjct: 847 YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAME 906
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
G TY TL++ Y +F++ V +KG
Sbjct: 907 RNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 25/279 (8%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
+ ++ C EG + EA+ ++ KM V N ++ E+ N + ++ +
Sbjct: 540 YKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNV-S 598
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
Q+ V L M+ L + E IL LM + L A +R+IS F +
Sbjct: 599 QLDVMALGL-------MLNLRLKEGNLNETKAILNLMFKTDLGSSA--VNRVISSFVREG 649
Query: 157 EMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS--PGGR 213
++ KA EM +++ + G+ + LI + Q +L EA+ L+ L G S PG
Sbjct: 650 DVSKA-EMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---LAAGESKTPGKS 705
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
++++AY G + L E +KG P VT + L++ L + E
Sbjct: 706 VIRSMIDAYVRCGWLEDAYGLFMESAEKG--------CDPGAVTISILVNALTNRGKHRE 757
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
A I R E ++ D V Y+ +I +L+ A E+
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI 796
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 104 SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
+P ++ RSMI + +E+A G+ AEKG P A + S +++ + +A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ L+K I D Y LI+ + +L A ++++ M G+ +TY+T++ Y
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
+ K + + G + + N ++H + EAL + M +
Sbjct: 821 RGLQLDKAIEIFSNARRSGL-------YLDEKIYTNMIMH-YGKGGKMSEALSLFSEMQK 872
Query: 284 MLLDPDEVSYSAVI 297
+ P SY+ ++
Sbjct: 873 KGIKPGTPSYNMMV 886
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 56 VLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
+L K+ PD Y TL+K + + + + R++E + R P+E TY +++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTA----RMLEAMRRQDDRNSHPDEVTYTTVVS 460
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML-DKGIF 174
F + ++ A +L MA G+ + +Y+ ++ +CK ++ +A ++ EM D GI
Sbjct: 461 AFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIE 520
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
PDV +Y ++I A F EM RG++P +Y TL++A+ + G+ +
Sbjct: 521 PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRV 580
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
DE++ + L+ +N L+ G C ++A ++ M E P+ +Y
Sbjct: 581 FDEMMNDPRVKV-------DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYG 633
Query: 295 AVISGFRRIRELRKAFELKLEMDQKETC 322
++ +G + R+ A L E+ KE C
Sbjct: 634 SLANGVSQARKPGDALLLWKEI--KERC 659
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 42/338 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G+ ++S+ A+++ GK AEA+ +M +P +TY ++K E +K
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ E L P++ Y MI ++ E+A + M KG+ +
Sbjct: 229 E----EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 284
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++S KE+ K + +M I PDV +Y LLI+ RR EA +F+EML
Sbjct: 285 YNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Query: 205 LRGMSPGGRTYDTLVEAYCLKG--------------------------EFSKVFHLQD-E 237
G+ P + Y+ L++A+ + G S + D E
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDME 401
Query: 238 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
+K F V F P++VTY LI G ++ +E+ M + ++ + ++
Sbjct: 402 GAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Query: 298 SGFRRIRELRKAFELKLEMDQKETCW-PLDQDTNESLV 334
R + A EM E+C P DQ L+
Sbjct: 462 DASGRCKNFGSALGWYKEM---ESCGVPPDQKAKNVLL 496
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 32/248 (12%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLI--- 72
R ++G E +++ ++K K +EAE V E + D PD Y+ +I
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 73 KAACEAEKNH-------NPSIP---------------YVRIVELYHQMCVRELSPNETTY 110
K A EK +P Y + ++Y QM ++ P+ +Y
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSY 317
Query: 111 RSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 170
+I+ + R EEA+ + M + G+ P +Y+ ++ F + + +A + M
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
IFPD+ +Y ++ + + A F+ + + G P TY TL++ Y + K
Sbjct: 378 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 437
Query: 231 VFHLQDEV 238
+ + +++
Sbjct: 438 MMEVYEKM 445
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 42/338 (12%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G+ ++S+ A+++ GK AEA+ +M +P +TY ++K E +K
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ E L P++ Y MI ++ E+A + M KG+ +
Sbjct: 236 E----EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 291
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ ++S KE+ K + +M I PDV +Y LLI+ RR EA +F+EML
Sbjct: 292 YNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 348
Query: 205 LRGMSPGGRTYDTLVEAYCLKG--------------------------EFSKVFHLQD-E 237
G+ P + Y+ L++A+ + G S + D E
Sbjct: 349 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDME 408
Query: 238 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
+K F V F P++VTY LI G ++ +E+ M + ++ + ++
Sbjct: 409 GAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
Query: 298 SGFRRIRELRKAFELKLEMDQKETCW-PLDQDTNESLV 334
R + A EM E+C P DQ L+
Sbjct: 469 DASGRCKNFGSALGWYKEM---ESCGVPPDQKAKNVLL 503
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 32/248 (12%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLI--- 72
R ++G E +++ ++K K +EAE V E + D PD Y+ +I
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 73 KAACEAEKNH-------NPSIP---------------YVRIVELYHQMCVRELSPNETTY 110
K A EK +P Y + ++Y QM ++ P+ +Y
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSY 324
Query: 111 RSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 170
+I+ + R EEA+ + M + G+ P +Y+ ++ F + + +A + M
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
IFPD+ +Y ++ + + A F+ + + G P TY TL++ Y + K
Sbjct: 385 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 444
Query: 231 VFHLQDEV 238
+ + +++
Sbjct: 445 MMEVYEKM 452
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 19/250 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
S+NA++ L G + + E V ++M + PD +TYN L+ K R
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMD-------RF 273
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
L+ +M SP+ TY ++ + N+ A+ L M E G+ P Y+ +I
Sbjct: 274 DRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ + EM+ G PDV Y ++I L +A+++F+EM ++G P
Sbjct: 334 LSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN 393
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY++++ C+ GEF + L E+ +G +P+ V Y+ L+ L +
Sbjct: 394 VFTYNSMIRGLCMAGEFREACWLLKEMESRG--------CNPNFVVYSTLVSYLRKAGKL 445
Query: 272 DEALEILRGM 281
EA +++R M
Sbjct: 446 SEARKVIREM 455
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 139/319 (43%), Gaps = 16/319 (5%)
Query: 3 LLLRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD 62
LL+++ + K W + + G +FN ++ CGE L + +AV++ M
Sbjct: 154 LLMKIFAECGEYKAMWRL-VDEMVQDGFPTTARTFNLLICS-CGEAGLAK-QAVVQFMKS 210
Query: 63 PDCVTYNTL-IKAACEAEKNHNPSIPYVRIVE-LYHQMCVRELSPNETTYRSMIRLFCDR 120
T+N K + A N + +++E +Y QM SP+ TY ++
Sbjct: 211 K---TFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRL 267
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+++ + MA G SP + +Y+ ++ K + AL M + GI P V Y
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
LI L L + EM+ G P Y ++ Y + GE K + E+
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTV 387
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
KG LP ++ TYN++I GLC EA +L+ M +P+ V YS ++S
Sbjct: 388 KGQLP--------NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 301 RRIRELRKAFELKLEMDQK 319
R+ +L +A ++ EM +K
Sbjct: 440 RKAGKLSEARKVIREMVKK 458
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 18/227 (7%)
Query: 62 DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRN 121
+PD V Y +I A C+A+K Y + +++M R P+ + S+I
Sbjct: 264 EPDVVAYGIIINAHCKAKK-------YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 316
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
++ +A+ G A +Y+ ++ +C ++ M A + EM KG+ P+ Y
Sbjct: 317 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
+++ L +R EA +++Q M P TY+ +V +C K + DE+ K
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
G LP + +++LI LC + DEA E M ++ + P
Sbjct: 434 GVLP--------GMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
F +++ L E KL +A E+ + TYN L+ A C +++ +
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA-------Y 357
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+ +M ++ + PN TY ++ R +EA + + M+ P +Y ++ F
Sbjct: 358 KTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMF 414
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C + + A+++ EM KG+ P +H + LI LCH+ +L EA + F EML G+ P G
Sbjct: 415 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPG 474
Query: 213 RTYDTLVEAYCLKGEFSKVFHL 234
+ L + +G KV L
Sbjct: 475 HMFSRLKQTLLDEGRKDKVTDL 496
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 22/284 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
FN ++ L + +A+ V +KM +PD +Y L++ + + +R+
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ-------ELNLLRVD 252
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E+ +M P+ Y +I C + EEA+ M ++ P + +I+
Sbjct: 253 EVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
K++ ALE G + Y L+ C +R+ +A EM L+G+ P
Sbjct: 313 GSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNA 372
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
RTYD ++ + ++ + SK + + Y S P++ TY ++ C +R D
Sbjct: 373 RTYDIILH-HLIRMQRSK----------EAYEVYQTMSCEPTVSTYEIMVRMFCNKERLD 421
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
A++I M + P +S++I+ +L +A E EM
Sbjct: 422 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++NA+V C ++ +A +++M P+ TY+ ++ +++
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA------- 391
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E+Y M P +TY M+R+FC++ R++ A+ I M KG+ P +S +I+
Sbjct: 392 YEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
C ++ +A E EMLD GI P H + L Q L + R + DL +M
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 121/285 (42%), Gaps = 39/285 (13%)
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEA 126
YN LI++ + ++ + I L M ++L ET + + R + +V+EA
Sbjct: 130 NYNALIESLGKIKQ-------FKLIWSLVDDMKAKKLLSKET-FALISRRYARARKVKEA 181
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 186
+G M E G + ++R++ K++ +G A ++ +M K PD+ +Y +L++
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 187 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 246
+ LL ++ +EM G P Y ++ A+C ++ + +E+ Q+ P
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS 301
Query: 247 ---------------------------YVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 279
+ F TYNAL+ C+ QR ++A + +
Sbjct: 302 PHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVD 361
Query: 280 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
M + P+ +Y ++ R++ ++A+E+ M +C P
Sbjct: 362 EMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM----SCEP 402
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 133/307 (43%), Gaps = 17/307 (5%)
Query: 10 TVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDC 65
V + FW V + + G + + +FN V+ C E KL EA +V +M P+
Sbjct: 195 NVNEIDRFWKV-YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNV 253
Query: 66 VTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEE 125
V++N +I AC+ ++++ M +SPN TY S+I FC R++
Sbjct: 254 VSFNMMIDGACKTGDMRFA----LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDL 309
Query: 126 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 185
A I M + G+ + +Y ++ + + +AL + EM KG+ + Y ++
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 186 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
L + + A + ++M + M T +V C G + Q ++ +K +
Sbjct: 370 WLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV- 428
Query: 246 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 305
+V +N L+H ++ A +IL M L D +S+ +I G+ + +
Sbjct: 429 -------EDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 306 LRKAFEL 312
L +A E+
Sbjct: 482 LERALEI 488
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 43/272 (15%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM-------TDPDCVTYNTLIKAACEA--- 78
G +VSFN ++ C G +R A +L KM P+ VTYN++I C+A
Sbjct: 248 GVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 79 ---EKNHNPSI---------PYVRIVELY-------------HQMCVRELSPNETTYRSM 113
E+ + Y +V+ Y +M + L N Y S+
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
+ +E A+ +LR M K + + + ++ C+N + +A+E + ++ +K +
Sbjct: 368 VYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKL 427
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
D+ + L+ ++L A + ML++G+S ++ TL++ Y +G+ +
Sbjct: 428 VEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALE 487
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+ D +I+ + + +LV YN++++GL
Sbjct: 488 IYDGMIK--------MNKTSNLVIYNSIVNGL 511
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 27/292 (9%)
Query: 30 TEKGLVS----FNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKN 81
T KGLV +N++V L EG + A +VL M D T +++ C
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRN--- 409
Query: 82 HNPSIPYVR-IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
YV+ VE Q+ ++L + + +++ F ++ A IL M +GLS
Sbjct: 410 -----GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSL 464
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
A S+ +I + K ++ +ALE+ M+ ++ Y ++ L + A +
Sbjct: 465 DAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVV 524
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 260
M ++ + TY+TL+ G + D+++ K + S SLVT+N
Sbjct: 525 NAMEIKDIV----TYNTLLNESLKTGNVEEA----DDILSK--MQKQDGEKSVSLVTFNI 574
Query: 261 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+I+ LC F ++A E+L+ M E + PD ++Y +I+ F + R K EL
Sbjct: 575 MINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 24 GFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHN 83
G LV +N++V L G AEAV+ M D VTYNTL+ E+ K N
Sbjct: 491 GMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLN---ESLKTGN 547
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+ ++ Q E S + T+ MI C E+A +L+ M E+G+ P +
Sbjct: 548 VEEADDILSKMQKQ--DGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSI 605
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+Y +I+ F K++ K +E+ ++ +G+ P H Y
Sbjct: 606 TYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 26/304 (8%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAAC 76
F+N +R T A +E + ++ L G + +A +++ + +
Sbjct: 77 FYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLM-------------SV 123
Query: 77 EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
E EK +P ++ Y Q C SP+ + S++R + A ++ +
Sbjct: 124 EGEK-LSPLHVLSGLIRSY-QACGS--SPD--VFDSLVRACTQNGDAQGAYEVIEQTRAE 177
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
G + + + E+ + ++ EM G +V+ + L+I C + +L EA
Sbjct: 178 GFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEA 237
Query: 197 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF-SPSL 255
+F ML G+ P +++ +++ C G+ L G + +F SP+
Sbjct: 238 LSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL------GKMGMMSGNFVSPNA 291
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
VTYN++I+G C R D A I M + +D +E +Y A++ + R +A L E
Sbjct: 292 VTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDE 351
Query: 316 MDQK 319
M K
Sbjct: 352 MTSK 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
LV+FN ++ LC G +A+ VL+ M + PD +TY TLI + +
Sbjct: 569 LVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQE------- 621
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDR 120
++VEL+ + ++ ++P+E Y S++R DR
Sbjct: 622 KVVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 142/360 (39%), Gaps = 61/360 (16%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLI 72
FW + G A ++ VV+ L E E +L ++ T CV Y I
Sbjct: 205 FWEIERLGLDADAH-----TYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFI 259
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
+ C N I Y + L + + S YR ++R C R+E+A ++
Sbjct: 260 EGLC---LNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLD 316
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-------------------GI 173
M + G+ P YS II KN + KA+++ +ML K G
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 174 FPDVH----------------AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 217
F + + Y + L ++ EA +LF+EM +G++P Y T
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 218 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 277
L+ CL+G+ S F L E+ G +P +V YN L GL EA E
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTG--------KTPDIVIYNVLAGGLATNGLAQEAFET 488
Query: 278 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDF 337
L+ M + P V+++ VI G EL KA ++ K ++ + S+VK F
Sbjct: 489 LKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS------RENDASMVKGF 542
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 23/281 (8%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+++ VV+ LC E ++ +AE+V+ M DPD Y+ +I+ N +IP +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEG-----HRKNMNIP--K 344
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
V+++++M + N S+++ +C EA + + E +S Y+
Sbjct: 345 AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
K ++ +A+E+ EM KGI PDV Y LI C Q + +A DL EM G +P
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
Y+ L G + F + +G P Y VT+N +I GL
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTY--------VTHNMVIEGLIDAGE 516
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
D+A + + D ++++ GF L AFE
Sbjct: 517 LDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFE 553
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 55/309 (17%)
Query: 44 LCGEGK-LREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQM 98
LC E + +A+ +L++M +P+ Y LI A C E + +
Sbjct: 574 LCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR-------EFFEIL 626
Query: 99 CVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 158
+++ P+ TY MI +C N ++A + M + + P +YS +++
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS------- 679
Query: 159 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 218
L+MK EM + PDV Y ++I CH L + LF++M R + P TY L
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 219 ----------------------------VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 250
++ C G+ + + D++I+ G
Sbjct: 740 LKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGV------- 792
Query: 251 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
P Y ALI C EA I M E + PD V Y+A+I+G R + KA
Sbjct: 793 -DPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAV 851
Query: 311 ELKLEMDQK 319
+L EM +K
Sbjct: 852 KLVKEMLEK 860
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHN------ 83
L ++ ++ C + ++A A+ E M PD VTY+ L+ + E +
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDV 694
Query: 84 -PSIPYVRIV--------------ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVG 128
P + Y I+ L+ M RE+ P+ TY +++ +RN
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN------- 747
Query: 129 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 188
+ R M + P Y+ +I CK ++G+A + +M++ G+ PD Y LI C
Sbjct: 748 LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCC 807
Query: 189 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 248
L EA+ +F M+ G+ P Y L+ C G K L E+++KG P
Sbjct: 808 KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP--- 864
Query: 249 TSFSPSLVTYNAL 261
T S S V Y L
Sbjct: 865 TKASLSAVHYAKL 877
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 129/330 (39%), Gaps = 59/330 (17%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPY 88
G + V+ N V++ L G+L +AEA E + +++K C A + +
Sbjct: 496 GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERF 555
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFC-DRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+R+ E ++ Y ++ C +++ + +A +L M + G+ P Y +
Sbjct: 556 IRL----------EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
+I +C+ + KA E ++ K I PD+ Y ++I C +A LF++M R
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 208 MSPGGRTYDTLVEA----------------------------YCLKGEFSKVFHLQDEVI 239
+ P TY L+ + YC + KV+ L ++
Sbjct: 666 VKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 240 QKGFLPYYVT--------------------SFSPSLVTYNALIHGLCFFQRPDEALEILR 279
++ +P VT P + Y LI C EA I
Sbjct: 726 RREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFD 785
Query: 280 GMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
M E +DPD Y+A+I+ ++ L++A
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGYLKEA 815
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 133/303 (43%), Gaps = 42/303 (13%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
G +V +N + L G +EA L+ M + P VT+N +I+ +A +
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE-- 516
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLS--- 139
+ E +++ + N+ SM++ FC A G L E+ +
Sbjct: 517 ------LDKAEAFYESLEHKSRENDA---SMVKGFC-------AAGCLDHAFERFIRLEF 560
Query: 140 PHADS-YSRIISRFCKNKE-MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
P S Y + + C K+ + KA ++ M G+ P+ YG LI C + +AR
Sbjct: 561 PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR 620
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
+ F+ ++ + + P TY ++ YC E + + L +++ ++ P +VT
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR--------DVKPDVVT 672
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
Y+ L++ D L++ R M + PD V Y+ +I+ + + +L+K + L +M
Sbjct: 673 YSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 318 QKE 320
++E
Sbjct: 726 RRE 728
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 5/209 (2%)
Query: 112 SMIRLFCDRNRVEEAVGIL-RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 170
++++ + + + +EA+ I R G +P + + +ISR + + E+
Sbjct: 151 ALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIER 210
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
G+ D H Y L++Q L E L +L+ Y +E CL
Sbjct: 211 LGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDI 270
Query: 231 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
+ L + L S + Y ++ GLC+ R ++A ++ M + +DPD
Sbjct: 271 AYFLLQPLRDANIL----VDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDV 326
Query: 291 VSYSAVISGFRRIRELRKAFELKLEMDQK 319
YSA+I G R+ + KA ++ +M +K
Sbjct: 327 YVYSAIIEGHRKNMNIPKAVDVFNKMLKK 355
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 100 VRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEM 158
+ ++ PN TT+ SM+ F E I R M E+ G SP+ SY+ ++ +C M
Sbjct: 238 IGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLM 297
Query: 159 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 218
+A ++ EM +G+ D+ AY +I LC +++A++LF++M L+G+ TY+ L
Sbjct: 298 SEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHL 357
Query: 219 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC---FFQRPDEAL 275
V YC G+ + E+ +KG F +T AL+ GLC QR EA
Sbjct: 358 VNGYCKAGDVDSGLVVYREMKRKG--------FEADGLTIEALVEGLCDDRDGQRVVEAA 409
Query: 276 EILR-GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+I++ + E + P Y ++ ++ +A ++ EM
Sbjct: 410 DIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEM 451
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAAC------EAEKNHN 83
+FN+++ EG+ E + +M + P+ +YN L++A C EAEK
Sbjct: 246 TTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK--- 302
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ +M VR + + Y +MI C V +A + R M KG+
Sbjct: 303 ----------VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCL 352
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR---RLLEARDLF 200
+Y +++ +CK ++ L + EM KG D L++ LC R R++EA D+
Sbjct: 353 TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIV 412
Query: 201 QEMLLRGM-SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 259
++ + M P Y+ LV+ C G+ + ++Q E++ KG F PS TY
Sbjct: 413 KDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG--------FKPSQETYR 464
Query: 260 ALIHG 264
A I G
Sbjct: 465 AFIDG 469
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNP 84
G + S+N +++ C G + EAE V E+M D V YNT+I C
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC-------S 328
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ V+ EL+ M ++ + TY ++ +C V+ + + R M KG +
Sbjct: 329 NFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLT 388
Query: 145 YSRIISRFCKNKEMGKALE----MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
++ C +++ + +E +K + + +P + Y LL++ LC ++ A ++
Sbjct: 389 IEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQ 448
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGE 227
EM+ +G P TY ++ Y + G+
Sbjct: 449 AEMVGKGFKPSQETYRAFIDGYGIVGD 475
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 25/247 (10%)
Query: 6 RVSSTVATLKTFWN----VPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAV---LE 58
++ S T+++FW VP TA FNA+++ LC E + +A V L+
Sbjct: 156 KLCSVRQTVESFWKFKRLVPDFFDTAC--------FNALLRTLCQEKSMTDARNVYHSLK 207
Query: 59 KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFC 118
PD T+N L+ +E+ + +M + L P+ TY S+I ++C
Sbjct: 208 HQFQPDLQTFNILLSGWKSSEE----------AEAFFEEMKGKGLKPDVVTYNSLIDVYC 257
Query: 119 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 178
+E+A ++ M E+ +P +Y+ +I + KA E+ EM + G +PDV
Sbjct: 258 KDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVA 317
Query: 179 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
AY I+ C RRL +A L EM+ +G+SP TY+ L + + + L +
Sbjct: 318 AYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRM 377
Query: 239 IQKGFLP 245
+ LP
Sbjct: 378 LGNECLP 384
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
G + +V++N+++ C + ++ +A +++KM + PD +TY T+I +
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ-- 296
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
P + E+ C P+ Y + IR FC R+ +A ++ M +KGLSP+A
Sbjct: 297 -PDKAREVLKEMKEYGCY----PDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 351
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+Y+ ++G++ E+ V ML P+ + LI++ ++ A L+++
Sbjct: 352 TTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWED 411
Query: 203 MLLRG 207
M+++G
Sbjct: 412 MVVKG 416
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 63 PDCVTYNTLIKAAC---EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCD 119
PD VTYN+LI C E EK + +L +M E +P+ TY ++I
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAY----------KLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 120 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
+ ++A +L+ M E G P +Y+ I FC + +G A ++ EM+ KG+ P+
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
Y L ++L L + +L+ ML P ++ L++ + + L ++++
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Query: 240 QKGFLPY 246
KGF Y
Sbjct: 414 VKGFGSY 420
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ ++ C+ K M A + L PD+ + +L L + EA F+EM
Sbjct: 183 FNALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNIL---LSGWKSSEEAEAFFEEMK 238
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G+ P TY++L++ YC E K + L D++ ++ +P ++TY +I G
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE--------EETPDVITYTTVIGG 290
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
L +PD+A E+L+ M E PD +Y+A I F R L A +L EM +K
Sbjct: 291 LGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
+ +++R C + +A + + + P +++ ++S + K +A EM
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
KG+ PDV Y LI + C R + +A L +M +P TY T++ L G+
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 289
K + E+ + G P + YNA I C +R +A +++ M + L P+
Sbjct: 299 KAREVLKEMKEYGCYP--------DVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPN 350
Query: 290 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 327
+Y+ +L +++EL + M E C P Q
Sbjct: 351 ATTYNLFFRVLSLANDLGRSWELYVRMLGNE-CLPNTQ 387
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 17/256 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD TY+ LI A H + + + L M ++P+ +TY ++I
Sbjct: 176 PDAETYDALINA-------HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
EA+ + + M + G+ P +++ ++S + ++ KAL M + PD + +
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMS--PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
+I L + +A DLF M + P T+ +++ Y +KGE + + ++
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+G P++V+YNAL+ AL +L + + + PD VSY+ +++ +
Sbjct: 349 EG--------LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 301 RRIRELRKAFELKLEM 316
R R+ KA E+ L M
Sbjct: 401 GRSRQPGKAKEVFLMM 416
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 138/321 (42%), Gaps = 44/321 (13%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++N ++ G REA V +KMTD PD VT+N ++ +A ++ + ++ ++ Y +
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL-SAYKSGRQYSKALSYFEL 273
Query: 92 -----------------------------VELYHQMCVR--ELSPNETTYRSMIRLFCDR 120
++L++ M + E P+ T+ S++ L+ +
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+E + M +GL P+ SY+ ++ + + G AL + ++ GI PDV +Y
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
L+ R+ +A+++F M P TY+ L++AY G ++ + ++ Q
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
G P++V+ L+ ++ +L ++ + +Y++ I +
Sbjct: 454 DG--------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 301 RRIRELRKAFELKLEMDQKET 321
EL KA L M +K+
Sbjct: 506 INAAELEKAIALYQSMRKKKV 526
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 18/275 (6%)
Query: 48 GKLREAEAVLEK-MTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPN 106
GK +E ++ K P+ VTYN LI A + + VE++ QM + PN
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDA-------YGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 107 ETTYRSMIRLFCDRNRVEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
+ +++ C R++ + V +L +G++ + +Y+ I + E+ KA+ +
Sbjct: 460 VVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
M K + D + +LI C + EA +EM + Y +++ AY +
Sbjct: 519 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 578
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G+ ++ + +++ G P ++ Y +++H ++ +A E+ M
Sbjct: 579 GQVTEAESIFNQMKMAG--------CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
++PD ++ SA++ F + + F L M +KE
Sbjct: 631 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y MIRL N V++A G+ M + P A++Y +I+ + + A+ + +ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
I P Y LI EA ++ ++M G+ P T++ ++ AY ++S
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD-- 287
K + + KG P T+N +I+ L + +AL++ M E +
Sbjct: 266 KALSYFE--LMKG------AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317
Query: 288 PDEVSYSAVISGFR---RIRELRKAFE 311
PD V++++++ + I R FE
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFE 344
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 17/256 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD TY+ LI A H + + + L M ++P+ +TY ++I
Sbjct: 44 PDAETYDALINA-------HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 96
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
EA+ + + M + G+ P +++ ++S + ++ KAL M + PD + +
Sbjct: 97 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMS--PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
+I L + +A DLF M + P T+ +++ Y +KGE + + ++
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+G P++V+YNAL+ AL +L + + + PD VSY+ +++ +
Sbjct: 217 EG--------LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 301 RRIRELRKAFELKLEM 316
R R+ KA E+ L M
Sbjct: 269 GRSRQPGKAKEVFLMM 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 138/321 (42%), Gaps = 44/321 (13%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++N ++ G REA V +KMTD PD VT+N ++ +A ++ + ++ ++ Y +
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL-SAYKSGRQYSKALSYFEL 141
Query: 92 -----------------------------VELYHQMCVR--ELSPNETTYRSMIRLFCDR 120
++L++ M + E P+ T+ S++ L+ +
Sbjct: 142 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
+E + M +GL P+ SY+ ++ + + G AL + ++ GI PDV +Y
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
L+ R+ +A+++F M P TY+ L++AY G ++ + ++ Q
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
G P++V+ L+ ++ +L ++ + +Y++ I +
Sbjct: 322 DG--------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 301 RRIRELRKAFELKLEMDQKET 321
EL KA L M +K+
Sbjct: 374 INAAELEKAIALYQSMRKKKV 394
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 18/275 (6%)
Query: 48 GKLREAEAVLEK-MTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPN 106
GK +E ++ K P+ VTYN LI A + + VE++ QM + PN
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDA-------YGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 107 ETTYRSMIRLFCDRNRVEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
+ +++ C R++ + V +L +G++ + +Y+ I + E+ KA+ +
Sbjct: 328 VVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 386
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
M K + D + +LI C + EA +EM + Y +++ AY +
Sbjct: 387 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 446
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G+ ++ + +++ G P ++ Y +++H ++ +A E+ M
Sbjct: 447 GQVTEAESIFNQMKMAG--------CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
++PD ++ SA++ F + + F L M +KE
Sbjct: 499 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 533
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y MIRL N V++A G+ M + P A++Y +I+ + + A+ + +ML
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
I P Y LI EA ++ ++M G+ P T++ ++ AY ++S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD-- 287
K + + KG P T+N +I+ L + +AL++ M E +
Sbjct: 134 KALSYFE--LMKG------AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 288 PDEVSYSAVISGFR---RIRELRKAFE 311
PD V++++++ + I R FE
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFE 212
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 22/283 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN +V+ C + K+ EA V++KM + PD VTYNT+ A C +K VR
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGET-----VRA 242
Query: 92 -VELYHQMCVRELS-PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E+ +M ++E + PN T ++ +C RV + + +R M E + + ++ +I
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ F + + E+ M + + DV Y ++ + +A +F+EM+ G+
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
P Y L + Y E K L L + P++V + +I G C
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEEL---------LETLIVESRPNVVIFTTVISGWCSNG 413
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
D+A+ + M + + P+ ++ ++ G+ +++ KA E+
Sbjct: 414 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 135/296 (45%), Gaps = 28/296 (9%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
+GT+ + FNAV+ G + +A L KM +P TYNTLIK A K
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
S +++L + ++ PN T+ +++ +C + +VEEA +++ M E G+ P
Sbjct: 169 SS----ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 144 SYSRIISRFCKNKEMGKALEMKVE--MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+Y+ I + + + E +A VE ++ + P+ G+++ C + R+ + +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-----SFSPSLV 256
M + +++L+ + EV+ + + +T + ++
Sbjct: 285 RMKEMRVEANLVVFNSLINGFV-------------EVMDRDGIDEVLTLMKECNVKADVI 331
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
TY+ +++ ++A ++ + M + + PD +YS + G+ R +E +KA EL
Sbjct: 332 TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
++ + +R R EA + + +AE G P SY+ +++ K+ G + E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
D + +I + +A +M G++P TY+TL++ Y + G+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 233 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 292
L D ++++G + P++ T+N L+ C ++ +EA E+++ M E + PD V+
Sbjct: 171 ELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 293 YSAVISGF-RRIRELRKAFELKLEMDQKETCWP 324
Y+ + + + ++ +R E+ +M KE P
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 139/319 (43%), Gaps = 53/319 (16%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
N +++R G+ EA+ V + + + P ++Y TL+ AA +K + V V
Sbjct: 52 MNVLIER----GRPHEAQTVFKTLAETGHRPSLISYTTLL-AAMTVQKQYGSISSIVSEV 106
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E + + ++I F + +E+AV L M E GL+P +Y+ +I +
Sbjct: 107 EQSGTKL------DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 153 CKNKEMGKALEMKVEMLDKG---IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ ++ E+ ML++G + P++ + +L+Q C ++++ EA ++ ++M G+
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL-----PYYVTS-------------- 250
P TY+T+ Y KGE + EV++K + P T
Sbjct: 221 PDTVTYNTIATCYVQKGE---TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR 277
Query: 251 -------------FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
+LV +N+LI+G D E+L M E + D ++YS V+
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVM 337
Query: 298 SGFRRIRELRKAFELKLEM 316
+ + + KA ++ EM
Sbjct: 338 NAWSSAGYMEKAAQVFKEM 356
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD---PDCVTYNTLIKAACEAEKNHNPS 85
G + ++ N+++ L E + A V K+ D PD T+N LI C+A K +
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDAR 293
Query: 86 IPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 145
+ M V E +P+ TY S + +C +L M E G +P+ +Y
Sbjct: 294 A-------MMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 146 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
+ ++ K+K++ +AL + +M + G PD Y LI +L R +A ++F++M
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 206 RGMSPGGRTYDTLVEA 221
+G+ Y+T++ A
Sbjct: 407 QGVRRDVLVYNTMISA 422
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 100 VRELSPNE-------TTYRSMIRLFCDRNRVEEAV-GILRLMAEKGLSPHADSYSRIISR 151
V E++ NE T ++R + +AV L + G+ + + ++
Sbjct: 189 VNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDA 248
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
K + A E+ +++ D I PD + +LI C R+ +AR + M + +P
Sbjct: 249 LVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPD 307
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY + VEAYC +G+F +V + +E+ + G +P++VTY ++H L ++
Sbjct: 308 VVTYTSFVEAYCKEGDFRRVNEMLEEMRENGC--------NPNVVTYTIVMHSLGKSKQV 359
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
EAL + M E PD YS++I + + A E+
Sbjct: 360 AEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEI 400
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V++ + V+ C EG R +LE+M +P+ VTY ++ + ++++
Sbjct: 308 VVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ-------VA 360
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ +Y +M P+ Y S+I + R ++A I M +G+ Y+ +I
Sbjct: 361 EALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420
Query: 150 SRFCKNKEMGKALEMKVEMLD---KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
S + AL + M D + P+V Y L+++ CH++++ L M+
Sbjct: 421 SAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKN 480
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
+S TY L+ C+ G+ + +E ++KG +P
Sbjct: 481 DVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVT----YNTLIKAACEAEKNHNP 84
G +V++ V+ L ++ EA V EKM + CV Y++LI + +
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR---- 393
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK---GLSPH 141
+ E++ M + + + Y +MI +R E A+ +L+ M ++ SP+
Sbjct: 394 ---FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 142 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
++Y+ ++ C K+M + M+ + DV Y LLI+ LC ++ EA F+
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 202 EMLLRGMSPGGRTYDTLVE 220
E + +GM P T LV+
Sbjct: 511 EAVRKGMVPRDSTCKMLVD 529
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 18/242 (7%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHN 83
AG E + +++ V+ LC G++ A V M D P+ +T+N L++ +A +
Sbjct: 284 AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE- 342
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+++++Y+QM P+ TY +I C +E AV +L M +K +A
Sbjct: 343 ------KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS 396
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ I K +++ A M +M++ P+ Y +L+++ + + +EM
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ + P TY LV +C G ++ + L E++++ L +PSL Y ++
Sbjct: 457 DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCL-------TPSLSLYEMVLA 509
Query: 264 GL 265
L
Sbjct: 510 QL 511
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 135/327 (41%), Gaps = 33/327 (10%)
Query: 4 LLRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD- 62
++ +S V W++ I + E + +F +++R G EA +M D
Sbjct: 157 MIDLSGKVRQFDLAWHL-IDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDY 215
Query: 63 ---PDCVTYNTLI------KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSM 113
PD + ++ +I + A EA+ + P+ Y ++
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQS--------------FFDSLKDRFEPDVIVYTNL 261
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
+R +C + EA + + M G+ P+ +YS +I C+ ++ +A ++ +MLD G
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
P+ + L+++ R + ++ +M G P TY+ L+EA+C
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVK 381
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
+ + +I+K + T+N + + + + A + M E +P+ V+Y
Sbjct: 382 VLNTMIKK--------KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTY 433
Query: 294 SAVISGFRRIRELRKAFELKLEMDQKE 320
+ ++ F + ++K EMD KE
Sbjct: 434 NILMRMFVGSKSTDMVLKMKKEMDDKE 460
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 42/245 (17%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y MI L + + A ++ LM + + ++++ +I R+ + +A+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARD------------------------------- 198
D G PD A+ ++I L +RR EA+
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 199 ---LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
+F+EM L G+ P TY +++A C G+ S+ + +++ G +P+
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG--------CAPNA 325
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
+T+N L+ R ++ L++ M ++ +PD ++Y+ +I R L A ++
Sbjct: 326 ITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNT 385
Query: 316 MDQKE 320
M +K+
Sbjct: 386 MIKKK 390
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
F + K+ G R ++E +P+ VTYN L++ ++ ++++
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTD-------MVLKMKK 454
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAE-KGLSPHADSYSRIISRFCKN 155
+M +E+ PN TYR ++ +FC A + + M E K L+P Y ++++ +
Sbjct: 455 EMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRA 514
Query: 156 KEMGKALEMKVEMLDKGI 173
++ K E+ +M+ KG+
Sbjct: 515 GQLKKHEELVEKMIQKGL 532
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 34/282 (12%)
Query: 66 VTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEE 125
+T NTLI + +++ + + +Y + + PNE T R MI++ C R++E
Sbjct: 200 ITLNTLIHYSSKSKIDD-------LVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKE 252
Query: 126 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 185
V +L + K P + ++ R + + +++ + +L K + D Y +++
Sbjct: 253 VVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVY 312
Query: 186 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
+ L+ AR +F EML RG S Y V C KG+ + L E+ + G P
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP 372
Query: 246 YYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEALEIL 278
Y T PS +N ++ + + + A EIL
Sbjct: 373 YDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEIL 432
Query: 279 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
+ PDE +YS +I GF ++ +A +L EM+ ++
Sbjct: 433 TKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRK 474
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 133/314 (42%), Gaps = 40/314 (12%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP------ 84
++ +++ LC EG+L+E +L+++ P + +L+ E +
Sbjct: 235 ITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKR 294
Query: 85 ---------SIPYVRIV-------------ELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
+I Y +V +++ +M R S N Y +R+ C++
Sbjct: 295 LLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD 354
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
V+EA +L M E G+SP+ ++++ +I F + K LE M+ +G+ P A+
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+++ + + A ++ + + +G P TY L+ + + + L
Sbjct: 415 MVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL-------- 466
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
F SP + +LI GLC + + + L+ M + L++P+ Y A+I F++
Sbjct: 467 FYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
Query: 303 IRELRKAFELKLEM 316
I + A + EM
Sbjct: 527 IGDKTNADRVYNEM 540
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 22/237 (9%)
Query: 11 VATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCV 66
V+ K F + RGF+A + V+ C +G ++EAE +L +M + P
Sbjct: 321 VSARKVFDEMLQRGFSANS-----FVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 67 TYNTLIKAACE---AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
T+N LI EK +E M R L P+ + + M++ V
Sbjct: 376 TFNCLIGGFARFGWEEKG----------LEYCEVMVTRGLMPSCSAFNEMVKSVSKIENV 425
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
A IL +KG P +YS +I F + ++ +AL++ EM + + P + L
Sbjct: 426 NRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSL 485
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
I LC ++ + M R + P YD L++A+ G+ + + +E+I
Sbjct: 486 IVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 21/275 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + V++N ++ L+EA V +M + PD VTY TLI +A
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG----- 443
Query: 85 SIPYVRI-VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ I +++Y +M LSP+ TY +I + A + M +G +P+
Sbjct: 444 ---FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ +I+ K + AL++ +M + G PD Y +++++L H L EA +F EM
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ P Y LV+ + G K + ++Q G P++ T N+L+
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG--------LRPNVPTCNSLLS 612
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
R EA +L+ M + L P +Y+ ++S
Sbjct: 613 TFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 19/257 (7%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 358 DGHTYTTMVGNLGRAKQ-------FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
+EA+ + M E G P +Y +I K + A++M M + G+ PD Y ++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
I L L A LF EM+ +G +P T++ ++ + + L ++ G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG- 529
Query: 244 LPYYVTSFSPSLVTYNALIH--GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
F P VTY+ ++ G C F +EA + M PDE Y ++ +
Sbjct: 530 -------FQPDKVTYSIVMEVLGHCGFL--EEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 302 RIRELRKAFELKLEMDQ 318
+ + KA++ M Q
Sbjct: 581 KAGNVDKAWQWYQAMLQ 597
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
TY +M+ + E +L M G P+ +Y+R+I + + + +A+ + +M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+ G PD Y LI + L A D++Q M G+SP TY ++ G
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
L E++ +G +P+LVT+N +I + + AL++ R M P
Sbjct: 481 PAAHRLFCEMVGQGC--------TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 327
D+V+YS V+ L +A + EM +K W D+
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN--WVPDE 569
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 123/273 (45%), Gaps = 25/273 (9%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
S+NA++ L G + + + V E+M + PD +TYN ++ A K R+
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD-------RL 276
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
L +M SP+ TY ++ N+ A+ +L M E G+ P ++ +I
Sbjct: 277 YRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ ++ E + G PDV Y ++I L +A ++F+EM +G P
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY++++ +C+ G+F + L E+ +G +P+ V Y+ L++ L +
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRG--------CNPNFVVYSTLVNNLKNAGKV 448
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
EA E+++ M E + Y +IS ++ R
Sbjct: 449 LEAHEVVKDMVE------KGHYVHLISKLKKYR 475
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
Y I +Y QM +P+ TY ++ + + +L M + G SP +Y+
Sbjct: 238 YKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNI 297
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
++ + AL + M + G+ P V + LI L +L + E + G
Sbjct: 298 LLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG 357
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+P Y ++ Y GE K + E+ +KG LP ++ TYN++I G C
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP--------NVFTYNSMIRGFCM 409
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ EA +L+ M +P+ V YS +++ + ++ +A E+ +M +K
Sbjct: 410 AGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + V++N ++ L EA V +M + PD VTY TLI +A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG----- 448
Query: 85 SIPYVRI-VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ I +++Y +M LSP+ TY +I + A + M ++G +P+
Sbjct: 449 ---FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ ++ K + AL++ +M + G PD Y +++++L H L EA +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ P Y LV+ + G K + ++ G P++ T N+L+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--------LRPNVPTCNSLLS 617
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+ EA E+L+ M + L P +Y+ ++S
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 304 RELRKAFELKLEM 316
+ KA++ M
Sbjct: 588 GNVEKAWQWYQAM 600
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 10/219 (4%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
TY +M+ + +L M G P+ +Y+R+I + + + +A+ + +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+ G PD Y LI + L A D++Q M G+SP TY ++ G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
L E++ +G +P+LVTYN ++ + AL++ R M +P
Sbjct: 486 PAAHKLFCEMVDQGC--------TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 327
D+V+YS V+ L +A + EM QK W D+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN--WIPDE 574
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + V++N ++ L EA V +M + PD VTY TLI +A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG----- 448
Query: 85 SIPYVRI-VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ I +++Y +M LSP+ TY +I + A + M ++G +P+
Sbjct: 449 ---FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ ++ K + AL++ +M + G PD Y +++++L H L EA +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ P Y LV+ + G K + ++ G P++ T N+L+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--------LRPNVPTCNSLLS 617
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+ EA E+L+ M + L P +Y+ ++S
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 304 RELRKAFELKLEM 316
+ KA++ M
Sbjct: 588 GNVEKAWQWYQAM 600
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 10/219 (4%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
TY +M+ + +L M G P+ +Y+R+I + + + +A+ + +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+ G PD Y LI + L A D++Q M G+SP TY ++ G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
L E++ +G +P+LVTYN ++ + AL++ R M +P
Sbjct: 486 PAAHKLFCEMVDQGC--------TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 327
D+V+YS V+ L +A + EM QK W D+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN--WIPDE 574
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + V++N ++ L EA V +M + PD VTY TLI +A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG----- 448
Query: 85 SIPYVRI-VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++ I +++Y +M LSP+ TY +I + A + M ++G +P+
Sbjct: 449 ---FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+Y+ ++ K + AL++ +M + G PD Y +++++L H L EA +F EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+ P Y LV+ + G K + ++ G P++ T N+L+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--------LRPNVPTCNSLLS 617
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+ EA E+L+ M + L P +Y+ ++S
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 304 RELRKAFELKLEM 316
+ KA++ M
Sbjct: 588 GNVEKAWQWYQAM 600
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 10/219 (4%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
TY +M+ + +L M G P+ +Y+R+I + + + +A+ + +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+ G PD Y LI + L A D++Q M G+SP TY ++ G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
L E++ +G +P+LVTYN ++ + AL++ R M +P
Sbjct: 486 PAAHKLFCEMVDQGC--------TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 327
D+V+YS V+ L +A + EM QK W D+
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN--WIPDE 574
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 10/235 (4%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+++ +M R+ NE TY ++ + ++V+EAVG+ E G+ ++ ++
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWL 223
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ K + A E + D+ A +++ C + EA+ +++++ P
Sbjct: 224 CRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDV 282
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
+Y T++ A KG+ K L + + T +P + N +I LCF +R
Sbjct: 283 VSYGTMINALTKKGKLGKAMEL--------YRAMWDTRRNPDVKICNNVIDALCFKKRIP 334
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK-ETCWPLD 326
EALE+ R + E DP+ V+Y++++ +IR K +EL EM+ K +C P D
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND 389
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 28/249 (11%)
Query: 7 VSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD---- 62
V V K FW + A+ +VS+ ++ L +GKL +A + M D
Sbjct: 259 VLGNVHEAKRFW----KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRN 314
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD N +I A C ++ IP +E++ ++ + PN TY S+++ C R
Sbjct: 315 PDVKICNNVIDALCFKKR-----IP--EALEVFREISEKGPDPNVVTYNSLLKHLCKIRR 367
Query: 123 VEEAVGILRLMAEKG--LSPHADSYSRIISRFCKNKEMGKALEM----KVEMLDKGIFPD 176
E+ ++ M KG SP+ ++S ++ ++K++ LE K EM
Sbjct: 368 TEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSD----- 422
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
Y L+ +L + + R+++ EM G+ P RTY + KG+ +
Sbjct: 423 --LYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Query: 237 EVIQKGFLP 245
E++ KG +P
Sbjct: 481 EMMSKGMVP 489
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 21/250 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++ ++ R K+ EA V E+ D D V ++ L+ C + +V
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYK--------HVEF 231
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E RE + ++ +C V EA + + P SY +I+
Sbjct: 232 AETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINA 291
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
K ++GKA+E+ M D PDV +I LC ++R+ EA ++F+E+ +G P
Sbjct: 292 LTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPN 351
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY++L++ C KV+ L +E+ KG S SP+ VT++ L L + QR
Sbjct: 352 VVTYNSLLKHLCKIRRTEKVWELVEEMELKG------GSCSPNDVTFSYL---LKYSQRS 402
Query: 272 DEALEILRGM 281
+ +L M
Sbjct: 403 KDVDIVLERM 412
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 38 NAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
N V+ LC + ++ EA V EK DP+ VTYN+L+K C+ + ++ E
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE-------KVWE 373
Query: 94 LYHQMCVR--ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
L +M ++ SPN+ T+ +++ R ++ +L MA+ +D Y+ +
Sbjct: 374 LVEEMELKGGSCSPNDVTFSYLLKY---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRL 430
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ + + K E+ EM G+ PD Y + I L + ++ EA FQEM+ +GM P
Sbjct: 431 YVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Query: 212 GRT 214
RT
Sbjct: 491 PRT 493
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 152/398 (38%), Gaps = 98/398 (24%)
Query: 6 RVSSTVATLKTFWNVPIRGFTAA---------GTEKGLVSFNAVVKRLCGEGKLREAEAV 56
R++ST TL + R AA G V+FN ++ G L EAE++
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 57 LEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRS 112
L+KM + PD TYN L+ +A +E Y ++ L P+ T+R+
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAA-------LEYYRKIRKVGLFPDTVTHRA 415
Query: 113 MIRLFCDRNRVEEA---------------------------------------------- 126
++ + C R V E
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC 475
Query: 127 -------VGILRLMAEKGLSPHADS-----------------YSRIISRFCKNKEMGKAL 162
++ + AEKGL A++ Y+ +I + K K KAL
Sbjct: 476 VLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
+ M ++G +PD Y L Q+L + EA+ + EML G PG +TY ++ +Y
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
G S L E ++K T P+ V Y +LI+G +EA++ R M
Sbjct: 596 VRLGLLSDAVDLY-EAMEK-------TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME 647
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
E + + + +++I + ++ L +A + +M E
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 130/297 (43%), Gaps = 28/297 (9%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN ++ G+L +A + +M D VT+NT+I C + + +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT-CGTHGHLSEA------ 359
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
L +M + +SP+ TY ++ L D +E A+ R + + GL P ++ ++
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C+ K + + + EM I D H+ +++Q+ ++ +++A+ LF+ L +
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCV-LS 478
Query: 212 GRTYDTLVEAYCLKG---EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
T +++ Y KG E VF+ + ++ ++ YN +I
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRN----------MSGQRNDVLEYNVMIKAYGKA 528
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAV---ISGFRRIRELRKAFELKLEMDQKETC 322
+ ++AL + +GM PDE +Y+++ ++G + E ++ L+ K C
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 21/287 (7%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVL---EKMTDP--DCVTYNTLIKAACEAEKNHNPSIPYV 89
+ AV+ +G EAE V M+ D + YN +IKA +A+ +
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHE------- 532
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ + L+ M + P+E TY S+ ++ + V+EA IL M + G P +Y+ +I
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ + + + A+++ M G+ P+ YG LI + EA F+ M G+
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
+L++AY G + + D++ + P + N+++
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKD--------SEGGPDVAASNSMLSLCADLG 704
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
EA I + E D +S++ ++ ++ + L +A E+ EM
Sbjct: 705 IVSEAESIFNALREK-GTCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
L TT+ +++ C R+EE + IL+ M E P +Y+ +I + +L
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASL 318
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
+ EM I PDV AYG L+ LC R+ +LF EM + + Y L+E +
Sbjct: 319 RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGF 378
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
G+ +L ++++ G++ + YNA+I GLC + D+A ++ +
Sbjct: 379 VADGKVRSACNLWEDLVDSGYI--------ADIGIYNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 283 EMLLDPDEVSYSAVISGF 300
E L+PD + S ++ +
Sbjct: 431 EEELEPDFETLSPIMVAY 448
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 131/313 (41%), Gaps = 41/313 (13%)
Query: 31 EKGLV----SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
E GLV +F +VK LC G++ E +L++M + PD Y +IK +E N
Sbjct: 256 EDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLV-SEGNL 314
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
+ S+ ++ +M E+ P+ Y +++ C RVE + M K +
Sbjct: 315 DASL------RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDR 368
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+ Y +I F + ++ A + +++D G D+ Y +I+ LC ++ +A LFQ
Sbjct: 369 EIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQV 428
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF-LPYYVTSF---------- 251
+ + P T ++ AY + S ++ + + + G+ + Y+T F
Sbjct: 429 AIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEK 488
Query: 252 ---------------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
S+ YN L+ L ++L + M ++ +PD SYS
Sbjct: 489 NAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIA 548
Query: 297 ISGFRRIRELRKA 309
I F +++ A
Sbjct: 549 ICCFVEKGDVKAA 561
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 23/289 (7%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+ +++ +GK+R A + E + D D YN +IK C + +
Sbjct: 371 YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD-------KAY 423
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+L+ EL P+ T ++ + NR+ + +L + E G P +D ++
Sbjct: 424 KLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY-PVSDYLTQFFKLL 482
Query: 153 CKNKEMGK-ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
C ++E AL++ + KG V Y +L++ L + ++ LF EM G P
Sbjct: 483 CADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPD 541
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
+Y + + KG+ +++I+ S PS+ Y +L GLC
Sbjct: 542 SSSYSIAICCFVEKGDVKAACSFHEKIIE--------MSCVPSIAAYLSLTKGLCQIGEI 593
Query: 272 DEALEILRG-MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
D + ++R + + P E Y+ + + K ++ EM+Q+
Sbjct: 594 DAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQE 642
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 8/208 (3%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
P+E + +IR+ D R + M + G P Y+RI+ KN AL +
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV 250
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
+ + G+ + + +L++ LC R+ E ++ Q M P Y +++
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVS 310
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
+G + DE+ + P ++ Y L+ GLC R + E+ M
Sbjct: 311 EGNLDASLRVWDEMRR--------DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 285 LLDPDEVSYSAVISGFRRIRELRKAFEL 312
+ D Y +I GF ++R A L
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNL 390
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 43/258 (16%)
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
I E+ M + E E Y MI C R A I+ +M KGL P SY+ II
Sbjct: 291 IFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIH 350
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML------ 204
CK+ +A ++ E + FP + Y LL++ LC + +AR++ + ML
Sbjct: 351 GLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGAD 410
Query: 205 --------LRGMS---------------------PGGRTYDTLVEAYCLKGEFSKVFHLQ 235
LRG+ P T +T++ C G +
Sbjct: 411 RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVL 470
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL-RGMPEMLLDPDEVSYS 294
D+++ F +P VT N ++ GL R +EAL++L R MPE + P V+Y+
Sbjct: 471 DDMMTGKFC-------APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYN 523
Query: 295 AVISGFRRIRELRKAFEL 312
AVI G ++ + +A +
Sbjct: 524 AVIRGLFKLHKGDEAMSV 541
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 130/331 (39%), Gaps = 51/331 (15%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
L ++N ++ +LC ++ +A ++ M + PD VT+ TLI CE +
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCE-----------I 210
Query: 90 RIVELYH----QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILR-----LMAEKGLSP 140
R +E+ H +M V + PN T +I F VE +++ + E S
Sbjct: 211 RELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSM 270
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
A +++ ++ C+ E+ M AYG +I LC RR A +
Sbjct: 271 KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIV 330
Query: 201 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------SFSPS 254
M +G+ P +Y+ ++ C G + + L +E + F P T S
Sbjct: 331 YIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKE 390
Query: 255 LVT---------------------YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
L T YN + GLC P E L +L M + PDE +
Sbjct: 391 LDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 294 SAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+ VI+G ++ + A ++ +M + C P
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKFCAP 481
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 117/304 (38%), Gaps = 40/304 (13%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVT----YNTLIKAACEAEKNHNPS 85
T +F +V +C EG + + E M+ + V Y +I + C +NH +
Sbjct: 268 TSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAA 327
Query: 86 -IPYV---------------------------RIVELYHQMCVRELSPNETTYRSMIRLF 117
I Y+ R +L + E P+E TY+ ++
Sbjct: 328 RIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESL 387
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
C +A +L LM K + Y+ + C + L + V ML PD
Sbjct: 388 CKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDE 447
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLL-RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 236
+ +I LC R+ +A + +M+ + +P T +T++ +G + + +
Sbjct: 448 YTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLN 507
Query: 237 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
V+ + P +V YNA+I GL + DEA+ + + + + D +Y+ +
Sbjct: 508 RVMPE-------NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAII 560
Query: 297 ISGF 300
I G
Sbjct: 561 IDGL 564
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 18/252 (7%)
Query: 46 GEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSP 105
GE EAE +TD + I + C +N + ++ RI++ +C+R P
Sbjct: 37 GEDDAIEAEDRRRSVTDR--AYWRRRIHSICAVRRNPDEAL---RILD---GLCLRGYRP 88
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
+ S+I CD R +EA L G P + + II+R ++ L +
Sbjct: 89 DSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVI 148
Query: 166 VEMLD--KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
++ K P + Y L+ LC R+++A L +M RG P T+ TL+ YC
Sbjct: 149 HRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYC 208
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
E EV K F V P+ +T + LI G + + ++++ + E
Sbjct: 209 EIREL--------EVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
Query: 284 MLLDPDEVSYSA 295
+ + + S A
Sbjct: 261 YMKNETDTSMKA 272
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 131/323 (40%), Gaps = 46/323 (14%)
Query: 32 KGL----VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAAC---EAEK 80
KGL S+NA++ LC +G A +LE+ ++ P TY L+++ C + K
Sbjct: 336 KGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGK 395
Query: 81 NHN--------PSIPYVRIVELY-HQMCVRE----------------LSPNETTYRSMIR 115
N RI +Y +CV + P+E T ++I
Sbjct: 396 ARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVIN 455
Query: 116 LFCDRNRVEEAVGILR-LMAEKGLSPHADSYSRIISRFCKNKEMGKALE-MKVEMLDKGI 173
C RV++A+ +L +M K +P A + + ++ +AL+ + M + I
Sbjct: 456 GLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKI 515
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
P V AY +I+ L + EA +F ++ ++ TY +++ C+ +
Sbjct: 516 KPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKK 575
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
D+VI S Y A + GLC +A L + + P+ V Y
Sbjct: 576 FWDDVIWP--------SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCY 627
Query: 294 SAVISGFRRIRELRKAFELKLEM 316
+ VI+ R R+A+++ EM
Sbjct: 628 NTVIAECSRSGLKREAYQILEEM 650
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+ N V+ LC G++ +A VL+ M PD VT NT++ A+ ++ +
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM-CGLLAQGRAEEALDVLN 507
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
V M ++ P Y ++IR ++ +EA+ + + + ++ + +Y+ II
Sbjct: 508 RV-----MPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIID 562
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFP----DVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
C + ++M + D I+P D Y ++ LC L +A ++
Sbjct: 563 GLCVTNK----VDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADS 618
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
G P Y+T++ G + + + +E+ + G P VT
Sbjct: 619 GAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
+G PD +I LC R EA F L G P RT + ++ ++
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII---------AR 134
Query: 231 VFHLQDEVIQKGFLPYYV---TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
+ + + V G + + F PSL YN L++ LC R +A +++ M
Sbjct: 135 LLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHL 194
Query: 288 PDEVSYSAVISGFRRIRELRKAFELKLEM 316
PD V+++ +I G+ IREL A ++ EM
Sbjct: 195 PDVVTFTTLIGGYCEIRELEVAHKVFDEM 223
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 12/189 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVL-----EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
V+ N V+ L +G+ EA VL E P V YN +I+ + K
Sbjct: 484 VTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEA----- 538
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ ++ Q+ ++ + TTY +I C N+V+ A + A Y+ +
Sbjct: 539 --MSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFL 596
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C++ + A ++ D G P+V Y +I EA + +EM G +
Sbjct: 597 KGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQA 656
Query: 210 PGGRTYDTL 218
P T+ L
Sbjct: 657 PDAVTWRIL 665
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 57/314 (18%)
Query: 18 WNVPIRGFTAAGT------------EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC 65
WN I G+ +G E+ +VS+N++VK L G++ EA + E+M D
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV 202
Query: 66 VTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEE 125
V++ ++ + N + R L+ M R N ++ +MI + NR++E
Sbjct: 203 VSWTAMVDGLAK-----NGKVDEAR--RLFDCMPER----NIISWNAMITGYAQNNRIDE 251
Query: 126 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 185
A + ++M E+ + S++ +I+ F +N+EM KA + M +K + ++ +I
Sbjct: 252 ADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKNVI----SWTTMIT 303
Query: 186 LLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDT----------LVEAYCLKGEFSKVFHL 234
+ EA ++F +ML G + P TY + LVE + SK H
Sbjct: 304 GYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Query: 235 QDEVIQKGFLPYYVTS---------FSPSLV------TYNALIHGLCFFQRPDEALEILR 279
++E++ L Y S F LV ++N++I EA+E+
Sbjct: 364 KNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYN 423
Query: 280 GMPEMLLDPDEVSY 293
M + P V+Y
Sbjct: 424 QMRKHGFKPSAVTY 437
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 133/286 (46%), Gaps = 50/286 (17%)
Query: 40 VVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMC 99
++ LC GK+ EA + + + + D VT+ +I Y+++ ++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITG-------------YIKLGDMRE--- 95
Query: 100 VREL------SPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
REL N T+ +M+ + ++ A + + M E+ + S++ +I +
Sbjct: 96 ARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYA 151
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
++ + KALE+ EM ++ I ++ +++ L + R+ EA +LF+ M R +
Sbjct: 152 QSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDVV---- 203
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
++ +V+ G+ + L D + ++ +++++NA+I G R DE
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPER------------NIISWNAMITGYAQNNRIDE 251
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
A ++ + MPE D S++ +I+GF R RE+ KA L M +K
Sbjct: 252 ADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK 293
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 25/263 (9%)
Query: 46 GEGKLREAEA---VLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRIVELYHQM 98
G ++R+A V ++M + +CV YN L+ A C K+ + Y +++ +M
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALC---KSGDVDGGY----KMFQEM 269
Query: 99 CVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 158
L P+ ++ I +CD V A +L M L P+ +++ II CKN+++
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 159 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 218
A + EM+ KG PD Y ++ C + A L M P TY+ +
Sbjct: 330 DDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMV 389
Query: 219 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 278
++ G F + + + + ++ F P++ TY +IHGL R LE
Sbjct: 390 LKLLIRIGRFDRATEIWEGMSERKFY--------PTVATYTVMIHGLV---RKKGKLEEA 438
Query: 279 RGMPEMLLDPDEVSYSAVISGFR 301
EM++D YS + R
Sbjct: 439 CRYFEMMIDEGIPPYSTTVEMLR 461
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 17/248 (6%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+ R+VE + CV +L ++ CD+ V A G+ P A +YS
Sbjct: 161 FNRMVEFGIKPCVDDLD-------QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
++ + + ++ A ++ EML++ D+ AY L+ LC + +FQEM G
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+ P ++ + AYC G+ + + D + + + P++ T+N +I LC
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV--------PNVYTFNHIIKTLCK 325
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 327
++ D+A +L M + +PD +Y+++++ E+ +A +L MD+ + C P D+
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-CLP-DR 383
Query: 328 DTNESLVK 335
T ++K
Sbjct: 384 HTYNMVLK 391
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 124/295 (42%), Gaps = 23/295 (7%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + + + ++ LC + + A+ K P TY+ L++
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ ++E + CV +L Y +++ C V+ + + M GL P A S
Sbjct: 228 RKVFDEMLE---RNCVVDL----LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ I +C ++ A ++ M + P+V+ + +I+ LC ++ +A L EM+
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
+G +P TY++++ +C E ++ L + + LP TYN ++
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP--------DRHTYNMVLKL 392
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR----IRELRKAFELKLE 315
L R D A EI GM E P +Y+ +I G R + E + FE+ ++
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMID 447
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 14/221 (6%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRL---MAEKGLSPHADSYSRIISRFCKNKEMG 159
+ P+ TY ++R + R+ +A G ++ M E+ +Y+ ++ CK+ ++
Sbjct: 204 IVPSAKTYSILVRGWA---RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 160 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
+M EM + G+ PD +++ + I C + A + M + P T++ ++
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 220 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 279
+ C + + L DE+IQKG +P TYN+++ C + A ++L
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGA--------NPDTWTYNSIMAYHCDHCEVNRATKLLS 372
Query: 280 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 320
M PD +Y+ V+ RI +A E+ M +++
Sbjct: 373 RMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE-AEKNHNPSIP 87
+ +FN ++K LC K+ +A +L++M +PD TYN+++ C+ E N
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN------ 365
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
R +L +M + P+ TY +++L R + A I M+E+ P +Y+
Sbjct: 366 --RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 148 IISRFCKNK----EMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 187
+I + K E + EM M+D+GI P Y +++L
Sbjct: 424 MIHGLVRKKGKLEEACRYFEM---MIDEGIPP----YSTTVEML 460
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACE 77
I+ G ++++ +++ C GK+ +A + ++M+ DCV TY+ +++ C+
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRE----LSPNETTYRSMIRLFCDRNRVEEAVGILRLM 133
+ R +EL +M + +SPN TY +I+ FC++ RVEEA+ +L M
Sbjct: 248 SGDME-------RALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300
Query: 134 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRR 192
+G P+ + +I +N E KAL ++ L K G + L +R
Sbjct: 301 GNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKR 360
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
EA +F+ ML+RG+ P G + CL + F L E+ +K V S
Sbjct: 361 WEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKD-----VKSTI 415
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGM 281
S + + L+ GLC EA ++ + M
Sbjct: 416 DSDI-HAVLLLGLCQQGNSWEAAKLAKSM 443
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 145/305 (47%), Gaps = 25/305 (8%)
Query: 40 VVKRLCGEGKLR-EAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
+V LC + L EA VL K + D V YN +I+ A+K + +I + I E+
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLF--ADKG-DLNIADMLIKEM 191
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
CV L P+ TY SMI +C+ ++++A + + M++ ++ +YSRI+ CK
Sbjct: 192 D---CV-GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 155 NKEMGKALEMKVEML--DKG--IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+ +M +ALE+ EM D G I P+ Y L+IQ C +RR+ EA + M RG P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 211 GGRTYDTLVEAYCLKGEFSKVFH-LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
T L++ E K L D++++ G + FS + V+ L +
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLS-ECFSSATVS-------LIRMK 359
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 329
R +EA +I R M + PD ++ S V + F L E+++K+ +D D
Sbjct: 360 RWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDI 419
Query: 330 NESLV 334
+ L+
Sbjct: 420 HAVLL 424
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
++E Y + E N T R ++ L N +EA+ +LR E + +Y+ +I
Sbjct: 117 VIESYRK---EECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIR 173
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
F ++ A + EM G++PDV Y +I C+ ++ +A L +EM
Sbjct: 174 LFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVL 233
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK--GFLPYYVTSFSPSLVTYNALIHGLCFF 268
TY ++E C G+ + L E+ ++ G L SP+ VTY +I C
Sbjct: 234 NSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGL------ISPNAVTYTLVIQAFCEK 287
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
+R +EAL +L M P+ V+ +I G
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 50 LREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSP 105
++EA V++ M PD +N+L+ CE N NPS + + +M ++ P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
+Y ++ RV E+ IL M G P SY ++ GK ++
Sbjct: 284 TSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIV 343
Query: 166 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 225
EM+++G P+ Y LI +LC R+ A LF++M + G+ YD L+ C
Sbjct: 344 DEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKG 403
Query: 226 GEFSKVFHLQDEVI 239
G F K L +E +
Sbjct: 404 GNFEKGRELWEEAL 417
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 28/258 (10%)
Query: 36 SFNAVVKRLCGEGKLREAEAV---LEKMTDP-DCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+F+ V + L GK +A + L+K + P D T +I A C + H V
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS--RGHVKRALGV-- 195
Query: 92 VELYHQMCVRELSPNE-TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
++H V +S NE + YRS++ + + V+EA +++ M G++P ++ +++
Sbjct: 196 --MHHHKDV--ISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 251
Query: 151 RFCK---NKE----MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
C+ N+ + +AL + +EM I P +Y +L+ L RR+ E+ + ++M
Sbjct: 252 CLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQM 311
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G P +Y +V L G F K + DE+I++G F P Y LI
Sbjct: 312 KRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERG--------FRPERKFYYDLIG 363
Query: 264 GLCFFQRPDEALEILRGM 281
LC +R + AL++ M
Sbjct: 364 VLCGVERVNFALQLFEKM 381
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
E+A+GI +++ + + + IIS C + +AL + D ++ Y L
Sbjct: 155 EDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSL 214
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
+ QR + EAR + Q+M G++P +++L+ C + L E +
Sbjct: 215 LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNI-M 273
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
L P+ ++YN L+ L +R E+ +IL M DPD SY V+
Sbjct: 274 LEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVV 327
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT------DPDCVTYNTLIKAACEAEKNHNPSIP 87
+ ++N ++ LC G ++A +L++M PD TY LI + C
Sbjct: 200 VYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKA 259
Query: 88 YVRIV----ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
R + ++ +M R P+ TY +I C NR+ A+ + M KG P+
Sbjct: 260 IRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQV 319
Query: 144 SYSRIISRFCKNKEMGKALEMKVEM--LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+Y+ I + E+ A+EM M L G+ P Y LI L RR EARDL
Sbjct: 320 TYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLVV 378
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKG 226
EM+ G+ P TY + +A +G
Sbjct: 379 EMVEAGLVPREYTYKLVCDALSSEG 403
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL--SPHADSYSRIISRF 152
+++M P+ Y ++I C ++A +L M G P +Y+ +IS +
Sbjct: 188 FYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSY 247
Query: 153 CK-----------NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
C+ + M +A M EML +G PDV Y LI C R+ A +LF+
Sbjct: 248 CRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE 307
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 261
+M +G P TY++ + Y + E + + + G P TY L
Sbjct: 308 DMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG-------HGVPGSSTYTPL 360
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 296
IH L +R EA +++ M E L P E +Y V
Sbjct: 361 IHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 92/224 (41%), Gaps = 14/224 (6%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK----- 160
NE T R M L N + LR ++ + + + + I C K +G+
Sbjct: 126 NEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT---CLMKCLGEEGFVK 182
Query: 161 -ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM--SPGGRTYDT 217
AL M + PDV+AY +I LC +AR L +M L G P TY
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 218 LVEAYCLKGEFS---KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 274
L+ +YC G + K + + F F P +VTYN LI G C R A
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
LE+ M P++V+Y++ I + E+ A E+ M +
Sbjct: 303 LELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 141/310 (45%), Gaps = 27/310 (8%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPY 88
G E + N+++ GKL + V M D + ++N+++ + + + Y
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK--------LGY 170
Query: 89 VR-IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
V + L +M + L P+ T+ S++ + + ++A+ +L+ M GL P S S
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 148 IISRFCK--NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
++ + + ++GKA+ + L ++ DV+ LI + L AR +F M
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYI--LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+ + L A LK + + ++ E I+ P +T+N+L G
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK------------PDAITWNSLASGY 336
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 325
+P++AL+++ M E + P+ VS++A+ SG + R A ++ ++M Q+E P
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM-QEEGVGP- 394
Query: 326 DQDTNESLVK 335
+ T +L+K
Sbjct: 395 NAATMSTLLK 404
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 142/346 (41%), Gaps = 70/346 (20%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNH-- 82
G + +V++N+++ +G ++A AVL++M P + ++L++A AE H
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV--AEPGHLK 242
Query: 83 ------------------------------NPSIPYVRIVELYHQMCVRELSPNETTYRS 112
+PY R+V + M + N + S
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMV--FDMMDAK----NIVAWNS 296
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
++ +++A ++ M ++G+ P A +++ + S + + KAL++ +M +KG
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL-------------- 218
+ P+V ++ + A +F +M G+ P T TL
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 219 -VEAYCLKGEF----SKVFHLQDEVIQKGFLPYYVTSF----SPSLVTYNALIHGLCFFQ 269
V +CL+ L D + G L + F + SL ++N ++ G F
Sbjct: 417 EVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 476
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRR---IRELRKAFEL 312
R +E + M E ++PD +++++V+S + ++E K F+L
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDL 522
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 132/294 (44%), Gaps = 21/294 (7%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVL----EKMTDPDCVTYNTLIKAACEAEK 80
+ +G E L +F A++ G++ +A K PD V +N LI A +
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ--- 584
Query: 81 NHNPSIPYVRIVELYHQMCVRE--LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
S R ++ +M + P+ + ++++ C+ +VE A + +++ + G+
Sbjct: 585 ----SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI 640
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
+ Y+ ++ K+ + A + +M +K + PD + LI + H + L EA
Sbjct: 641 RGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFG 700
Query: 199 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
+ Q+ +G+ G +Y +L+ A C ++ K L +++ P++ T
Sbjct: 701 ILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS--------IKLRPTISTM 752
Query: 259 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
NALI LC + +A+E L + + L P+ ++YS ++ R + +F+L
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKL 806
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 34/248 (13%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMT------DPDCVTYNTLIKAACEAEK-------- 80
V FNA++ G + A VL +M DPD ++ L+KA C A +
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 81 --------NHNPSIPYVRI------------VELYHQMCVRELSPNETTYRSMIRLFCDR 120
P + + + +Y M ++++P+E + ++I +
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
++EA GIL+ +G+ SYS ++ C K+ KALE+ ++ + P +
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
LI LC +L +A + E+ G+ P TY L+ A K +F F L +
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKG 812
Query: 241 KGFLPYYV 248
G P +
Sbjct: 813 DGVSPNLI 820
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/331 (18%), Positives = 132/331 (39%), Gaps = 55/331 (16%)
Query: 21 PIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKA----AC 76
P R F + + RL +G++++ ++LE + D + + + A AC
Sbjct: 387 PARNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKAC 446
Query: 77 EAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK 136
+ ++ + + +++ L+P +T+ ++ + +E A G+LRL+ E
Sbjct: 447 KKQRAVKEAFRFTKLI----------LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQES 496
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
G++ Y+ +IS K+ ++ E+ +M + G+ ++H +G LI ++ +A
Sbjct: 497 GMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKA 556
Query: 197 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 256
+ + + + P ++ L+ A G + F + E + P +
Sbjct: 557 FGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAE------MKAETHPIDPDHI 610
Query: 257 TYNALIHGLCFFQRPDEALEI--------LRGMPEML----------------------- 285
+ AL+ C + + A E+ +RG PE+
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 286 ----LDPDEVSYSAVISGFRRIRELRKAFEL 312
+ PDEV +SA+I + L +AF +
Sbjct: 671 KEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
L S++A+ L EGKL E E VL M +P Y +KA C A K V
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA----V 353
Query: 90 RIV--ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYS 146
++ E+ C+ P Y +I+ CD + EAVG L+ M+++ + ++Y
Sbjct: 354 SVINKEMMQGHCL----PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ C++ + +A ++ EML K FP V Y ++I+ LC R EA +EM+ +
Sbjct: 410 TLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Query: 207 GMSPGGRTYDTLVEAYCL 224
M P + L E+ C
Sbjct: 470 DMVPESSVWKALAESVCF 487
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 121/301 (40%), Gaps = 48/301 (15%)
Query: 36 SFNAVVKRLCGEGKLREAEAVL--------EKMTDPDCVTYNTLIKAACEA--------- 78
S+ ++K C EGKL EA +L +K + D V Y L+ A C+A
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 79 -------------------EKNH--NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
E H + S R+ L + +R P +Y +M
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE-MKVEMLDKGIFPD 176
+ ++ E +L M KG P Y + C+ ++ +A+ + EM+ P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
V Y +LI+ LC + +EA ++M + TY TLV+ C G+F + +
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
+E++ + S P + TY+ +I GLC R EA+ L M + P+ + A
Sbjct: 429 EEML--------IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKA 480
Query: 296 V 296
+
Sbjct: 481 L 481
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM- 164
++ + S+IR F R+E+A+ + + + E + S+ ++ K E+ A +
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
+ + + A LL+++LC R A +FQEM +G P +Y L++ +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 278
+G+ + HL + F +V Y L+ LC D+A+EIL
Sbjct: 200 EGKLEEATHL----LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 121/284 (42%), Gaps = 26/284 (9%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRIV 92
F +V++ G+L +A ++ + + + +CV +++TL++ + +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA-------C 136
Query: 93 ELYHQMCV-RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++ + C E++ T ++++ C NR + A + + M +G P DSY ++
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 152 FCKNKEMGKALEMKVEML----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
FC ++ +A + M KG D+ Y +L+ LC + +A ++ ++L +G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 208 MSPGGRTYDTLVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+ R Y + + +V L E + +G + P L +Y+A+ L
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI--------PCLDSYSAMATDL 308
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+ E E+L M +P Y A + R +L++A
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
L S++A+ L EGKL E E VL M +P Y +KA C A K V
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA----V 353
Query: 90 RIV--ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYS 146
++ E+ C+ P Y +I+ CD + EAVG L+ M+++ + ++Y
Sbjct: 354 SVINKEMMQGHCL----PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ C++ + +A ++ EML K FP V Y ++I+ LC R EA +EM+ +
Sbjct: 410 TLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQ 469
Query: 207 GMSPGGRTYDTLVEAYCL 224
M P + L E+ C
Sbjct: 470 DMVPESSVWKALAESVCF 487
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 121/301 (40%), Gaps = 48/301 (15%)
Query: 36 SFNAVVKRLCGEGKLREAEAVL--------EKMTDPDCVTYNTLIKAACEA--------- 78
S+ ++K C EGKL EA +L +K + D V Y L+ A C+A
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 79 -------------------EKNH--NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
E H + S R+ L + +R P +Y +M
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE-MKVEMLDKGIFPD 176
+ ++ E +L M KG P Y + C+ ++ +A+ + EM+ P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 177 VHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
V Y +LI+ LC + +EA ++M + TY TLV+ C G+F + +
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
+E++ + S P + TY+ +I GLC R EA+ L M + P+ + A
Sbjct: 429 EEML--------IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKA 480
Query: 296 V 296
+
Sbjct: 481 L 481
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM- 164
++ + S+IR F R+E+A+ + + + E + S+ ++ K E+ A +
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
+ + + A LL+++LC R A +FQEM +G P +Y L++ +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 278
+G+ + HL + F +V Y L+ LC D+A+EIL
Sbjct: 200 EGKLEEATHL----LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 121/284 (42%), Gaps = 26/284 (9%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDCV----TYNTLIKAACEAEKNHNPSIPYVRIV 92
F +V++ G+L +A ++ + + + +CV +++TL++ + +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA-------C 136
Query: 93 ELYHQMCV-RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++ + C E++ T ++++ C NR + A + + M +G P DSY ++
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 152 FCKNKEMGKALEMKVEML----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
FC ++ +A + M KG D+ Y +L+ LC + +A ++ ++L +G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 208 MSPGGRTYDTLVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
+ R Y + + +V L E + +G + P L +Y+A+ L
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI--------PCLDSYSAMATDL 308
Query: 266 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
+ E E+L M +P Y A + R +L++A
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 28/277 (10%)
Query: 31 EKGLV---SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHN 83
++GLV +F V+K L +L++ M + T N ++ C+ +
Sbjct: 140 KRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEE 199
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
++++ E + P+E TYR+MI+ FCD + EA + LM ++G +
Sbjct: 200 AKFVFIKLKEF--------IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIE 251
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+ +I+ K + +A ++ M+ K G D Y ++I LC R+ AR +F E
Sbjct: 252 AGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDE 311
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M RG+ T+ +L+ +K + + L + V +P + Y+ LI
Sbjct: 312 MRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE------------NPDISIYHGLI 359
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
GL +R EA E+ R M + +P +Y ++ G
Sbjct: 360 KGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQG 396
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 137/336 (40%), Gaps = 47/336 (13%)
Query: 17 FWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM--TDP-DCVT-YNTLI 72
F + +RGF A V+ + +VK+ C +GKL EAE L + DP C + L+
Sbjct: 240 FDQISVRGFVCA------VTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILV 293
Query: 73 KAACEAEKNHNPS-----IPYVRIVEL--YHQMCVREL----------------SPNETT 109
A C K + I V V + + + +R L SP E
Sbjct: 294 DALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGC 353
Query: 110 ------YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
Y SM+ N ++ IL M +G+SP+ + + + FCK + +ALE
Sbjct: 354 ELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALE 413
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
+ + G P +Y LI LC + +A D+ + + RG GG+T+ TL A C
Sbjct: 414 LYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALC 473
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
KG+ L ++ LP + +I LC + ++AL I +
Sbjct: 474 WKGKPDMARELVIAAAERDLLPKRIAGCK--------IISALCDVGKVEDALMINELFNK 525
Query: 284 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+D ++++I G + A +L + M +K
Sbjct: 526 SGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 15 KTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKL-REAEAVLEKM-----TDPDCVTY 68
F I A E + +N +++ CG L A V KM + PD TY
Sbjct: 124 NNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETY 183
Query: 69 NTLIKAACEAEKNHNPSIPYVRIV-ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAV 127
L+ + + N Y+ V L QM + P+ +I+ + V+EA+
Sbjct: 184 TLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAI 243
Query: 128 GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 187
+ + MA G P+A +YS ++ C+ +G+ L EM KG+ P+ Y +LI L
Sbjct: 244 RVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSL 303
Query: 188 CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
+RRL EA ++ +ML +SP TY+T++ C G S+ + +E
Sbjct: 304 SMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
PD N +IKA + + + ++ +M + PN TY +++ C++ R
Sbjct: 221 PDTFVLNMIIKAYAKC-------LEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
V + +G + M KG+ P+ Y +I + + +A+E+ +ML + PD+ Y
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
++ LC R EA ++ +E R G R Y TL++
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 29/265 (10%)
Query: 68 YNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDR----NRV 123
Y+T+IK A ++N+ ++ +M V Y +IR C R NR
Sbjct: 111 YHTMIKQAITGKRNNFVETLIEEVIAGACEMSV-------PLYNCIIRFCCGRKFLFNRA 163
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCK--NK------EMGKALEMKVEMLDKGIFP 175
+ +++ P ++Y+ ++S K NK + + +M G+ P
Sbjct: 164 FDVYN--KMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIP 221
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
D ++I+ + EA +F+EM L G P TY LV+ C KG +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
E+ KG +P + Y LI L +R DEA+E++ M L PD ++Y+
Sbjct: 282 KEMQVKGMVP--------NGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 296 VISGFRRIRELRKAFELKLEMDQKE 320
V++ R +A E+ E +++
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRD 358
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
++ + +R R EA + + +AE G P SY+ +++ K+ G + E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
D + +I + +A +M G++P TY+TL++ Y + G+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 233 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 292
L D ++++G + P++ T+N L+ C ++ +EA E+++ M E + PD V+
Sbjct: 171 ELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 293 YSAVISGF-RRIRELRKAFELKLEMDQKETCWP 324
Y+ + + + ++ +R E+ +M KE P
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKP 258
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+FN +V+ C + K+ EA V++KM + PD VTYNT+ A C +K VR
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGET-----VRA 242
Query: 92 -VELYHQMCVRELS-PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E+ +M ++E + PN T ++ +C RV + + +R M E + + ++ +I
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 150 SRFCK---------------------NKEMGKALEMKVEML----DKGIFPDVHAYGLLI 184
+ F + E+ +MKV++L + + DV Y ++
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 185 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
+ +A +F+EM+ G+ P Y L + Y E K L L
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL---------L 413
Query: 245 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
+ P++V + +I G C D+A+ + M + + P+ ++ ++ G+ ++
Sbjct: 414 ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVK 473
Query: 305 ELRKAFEL 312
+ KA E+
Sbjct: 474 QPWKAEEV 481
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 138/308 (44%), Gaps = 27/308 (8%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHN 83
+GT+ + FNAV+ G + +A L KM +P TYNTLIK A K
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 84 PSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
S +++L + ++ PN T+ +++ +C + +VEEA +++ M E G+ P
Sbjct: 169 SS----ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 144 SYSRIISRFCKNKEMGKALEMKVE--MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 201
+Y+ I + + + E +A VE ++ + P+ G+++ C + R+ + +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 202 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKV-----------FHLQDEVIQKGFLPYYVTS 250
M + +++L+ + + + F+ + E++ + V +
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLT 344
Query: 251 F------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
++TY+ +++ ++A ++ + M + + PD +YS + G+ R +
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 404
Query: 305 ELRKAFEL 312
E +KA EL
Sbjct: 405 EPKKAEEL 412
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
V++N +V G +EA V+E MT P+ +TY T+I A +A K
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA------ 405
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
++L++ M PN TY +++ L ++R E + +L M G SP+ +++ +++
Sbjct: 406 -LKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 151 RFCKNKEMGKALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
C NK M K + EM G PD + LI ++A ++ EM G +
Sbjct: 465 -LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 258
TY+ L+ A KG++ ++ ++ KGF P TS+S L Y
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE-TSYSLMLQCY 571
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 19/277 (6%)
Query: 47 EGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRE 102
EG LREA+ ++ +P VTYN L++ +A Y + + +M
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG-------VYTEALSVLKEMEENS 346
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 162
+ TY ++ + +EA G++ +M +KG+ P+A +Y+ +I + K + +AL
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
++ M + G P+ Y ++ LL + R E + +M G SP T++T++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
KG D+ + + F F P T+N LI +A ++ M
Sbjct: 467 GNKG--------MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT 518
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+ +Y+A+++ R + R + +M K
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 47/306 (15%)
Query: 6 RVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD--- 62
R S V K + + GF A T ++NA++ L +G R E V+ M
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVT-----TYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 63 -PDCVTYNTLIKAACEA------EKNHN--------PSIPYVRIVELYHQMCVRELS--- 104
P +Y+ +++ + E+ N PS +R + L + C R L+
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC-RALAGSE 616
Query: 105 ------------PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
P+ + SM+ +F N ++A GIL + E GLSP +Y+ ++ +
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMY 676
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
+ E KA E+ + + PD+ +Y +I+ C + + EA + EM RG+ P
Sbjct: 677 VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCI 736
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
TY+T V Y G F+++ ++VI+ P+ +T+ ++ G C +
Sbjct: 737 FTYNTFVSGYTAMGMFAEI----EDVIE----CMAKNDCRPNELTFKMVVDGYCRAGKYS 788
Query: 273 EALEIL 278
EA++ +
Sbjct: 789 EAMDFV 794
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 100 VRE--LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 157
+RE LSP+ TY S++ ++ R +A IL+ + + L P SY+ +I FC+
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 158 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 217
M +A+ M EM ++GI P + Y + E D+ + M P T+
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776
Query: 218 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYY 247
+V+ YC G++S+ ++ K F P +
Sbjct: 777 VVDGYCRAGKYSEAMDFVSKI--KTFDPCF 804
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 16/236 (6%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D Y T++ A K Y + ++L+ +M SP TY ++ +F R
Sbjct: 209 DVRAYTTILHAYSRTGK-------YEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS 261
Query: 124 -EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
+ +G+L M KGL + S ++S + + +A E E+ G P Y
Sbjct: 262 WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNA 321
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L+Q+ EA + +EM TY+ LV AY G + + + + +KG
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
+ P+ +TY +I + DEAL++ M E P+ +Y+AV+S
Sbjct: 382 VM--------PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y +I C + +EA I + GL P +Y+ +I RF +G+A ++ EM+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RF---SSLGRAEKLYAEMI 72
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
+G+ PD Y +I LC Q +L +AR + S T++TL+ YC
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVK 123
Query: 230 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 289
+L E+ ++G + +++TY LIHG + AL+I + M +
Sbjct: 124 DGMNLFCEMYRRGIV--------ANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 290 EVSYSAVISGFRRIRELRKAFELKLE 315
+++ ++ +ELRKA + L+
Sbjct: 176 SITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 129 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 188
+ ++M E + Y+ II CK + +A + +L G+ PDV Y ++I+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 189 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 248
L A L+ EM+ RG+ P TY++++ C + + ++ +
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-------------- 102
Query: 249 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 308
S S T+N LI+G C R + + + M + + ++Y+ +I GFR++ +
Sbjct: 103 ---SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 309 AFELKLEM 316
A ++ EM
Sbjct: 160 ALDIFQEM 167
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 58 EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLF 117
E D D YN +I C+A K + ++ + + L P+ TY MIR F
Sbjct: 7 ESNMDMDTAGYNIIIHGLCKAGK-------FDEAGNIFTNLLISGLQPDVQTYNMMIR-F 58
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 177
R E+ + M +GL P +Y+ +I CK ++ +A + +
Sbjct: 59 SSLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSC 106
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
+ LI C R+ + +LF EM RG+ TY TL+ + G+F+ + E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 238 VIQKGFLPYYVT 249
++ G +T
Sbjct: 167 MVSNGVYSSSIT 178
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAAC--EAEKNHNPSI---- 86
+N ++ LC GK EA + + PD TYN +I+ + AEK + I
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGL 76
Query: 87 --PYVRIVELYHQMC-------VRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ + H +C R++S + +T+ ++I +C RV++ + + M +G
Sbjct: 77 VPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRG 136
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
+ + +Y+ +I F + + AL++ EM+ G++ + ++ LC ++ L +A
Sbjct: 137 IVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKA 195
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 91 IVELYHQMCV------RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ +L H C+ + + +E + +I + V+E+V I + M + G+ S
Sbjct: 163 VSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKS 222
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y+ + + A +M+ +G+ P H Y L++ RL A F++M
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
RG+SP T++T++ +C F DE +K F+ PS+V+Y +I G
Sbjct: 283 TRGISPDDATFNTMINGFCR-------FKKMDEA-EKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
R D+ L I M ++P+ +YS ++ G
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
T+ MI++ + +++ A IL M EKG+ D + +I + K + +++++ +M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
D G+ + +Y L +++ + R + A+ F +M+ G+ P TY+ ++ + L
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
+++ +G SP T+N +I+G C F++ DEA ++ M + P
Sbjct: 272 ETALRFFEDMKTRG--------ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 289 DEVSYSAVISGF 300
VSY+ +I G+
Sbjct: 324 SVVSYTTMIKGY 335
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 11/225 (4%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
F +++ G ++E+ + +KM D +YN+L K + Y+
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR-------YMMAK 240
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+++M + P TY M+ F R+E A+ M +G+SP +++ +I+ F
Sbjct: 241 RYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGF 300
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ K+M +A ++ VEM I P V +Y +I+ R+ + +F+EM G+ P
Sbjct: 301 CRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNA 360
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
TY TL+ C G+ + ++ ++ K P + F LV+
Sbjct: 361 TTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVS 405
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 12/223 (5%)
Query: 47 EGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPN 106
E LR E + + PD T+NT+I C +K +L+ +M ++ P+
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE-------KLFVEMKGNKIGPS 324
Query: 107 ETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 166
+Y +MI+ + +RV++ + I M G+ P+A +YS ++ C +M +A +
Sbjct: 325 VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRR---LLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
M+ K I P ++ + ++LL Q + + A ++ + M + Y L+E C
Sbjct: 385 NMMAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+++ L D +I+K + + + YN +I LC
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLC 485
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA-DSYSRIISRFCKN 155
Q +R+L P E + + + ++E A+ R GL H D++ ++I +
Sbjct: 105 QNSIRDLVP-EWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEV 163
Query: 156 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTY 215
++ A + ++M +KG+ D + +LI+ + E+ +FQ+M G+ ++Y
Sbjct: 164 SKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSY 223
Query: 216 DTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 275
++L + +G + ++++ +G P+ TYN ++ G R + AL
Sbjct: 224 NSLFKVILRRGRYMMAKRYFNKMVSEG--------VEPTRHTYNLMLWGFFLSLRLETAL 275
Query: 276 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
M + PD+ +++ +I+GF R +++ +A +L +EM
Sbjct: 276 RFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 115/316 (36%), Gaps = 94/316 (29%)
Query: 12 ATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVT 67
L+ F ++ RG + +FN ++ C K+ EAE + +M P V+
Sbjct: 273 TALRFFEDMKTRGISPDD-----ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS 327
Query: 68 YNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAV 127
Y T+IK ++ + + ++ +M + PN TTY +++ CD ++ EA
Sbjct: 328 YTTMIKGYLAVDRVDDG-------LRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAK 380
Query: 128 GILR------------------------------------LMAEKGLSPHADSYSRIISR 151
IL+ MA + A Y +I
Sbjct: 381 NILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIEN 440
Query: 152 FCKNKEMGKALEMKVEMLDKGIF--------PDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
CK +A+++ +++K I + AY +I+ LC+ + +A LF+++
Sbjct: 441 QCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL 500
Query: 204 LLRG-----------------------------MSPGG-----RTYDTLVEAYCLKGEFS 229
+ RG MS G Y+ L+++Y KGE
Sbjct: 501 MKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPG 560
Query: 230 KVFHLQDEVIQKGFLP 245
D +++ G +P
Sbjct: 561 DAKTALDSMVEDGHVP 576
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 132/312 (42%), Gaps = 17/312 (5%)
Query: 5 LRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-- 62
LRV + ++ FW+V + AG + L ++ V ++ + E + E M D
Sbjct: 270 LRVLARPNSVAEFWSV-VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGP 328
Query: 63 --PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDR 120
P + L++ + NP + V V ++ + LS + Y + R
Sbjct: 329 FKPSIQDCSLLLRYLSGSP---NPDLDLVFRVSRKYESTGKSLS--KAVYDGIHRSLTSV 383
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
R +EA I + M G P +YS+++ CK K + +A + +M +G FPD+ +
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
+LIQ C L +A F ML +G D L++ + + +F E+++
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 241 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 300
+ P TY LI L ++ +EAL++L+ M + ++ ++ F
Sbjct: 504 NA-------NVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF 556
Query: 301 RRIRELRKAFEL 312
+ + +K ++
Sbjct: 557 GTLEDAKKFLDV 568
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 26/231 (11%)
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
TY + +R+ N V E ++ M G D+Y ++ +F K++ M + +++
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR--------GMSPGGRTYDTLV 219
M+D P + LL++ L DL +++ R G S YD +
Sbjct: 324 MMDGPFKPSIQDCSLLLRYLSGSPN----PDL--DLVFRVSRKYESTGKSLSKAVYDGIH 377
Query: 220 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 279
+ G F + + + G+ P +TY+ L+ GLC +R +EA +L
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGY--------EPDNITYSQLVFGLCKAKRLEEARGVLD 429
Query: 280 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 330
M PD +++ +I G + EL KA M +K D D+N
Sbjct: 430 QMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEK----GFDIDSN 476
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 126/287 (43%), Gaps = 21/287 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVL---EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+F ++ LC G + +AE + +K+ D +N ++ C N
Sbjct: 226 AFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWC------NIWTDVTEAK 279
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
++ +M ++PN+ +Y MI F + +++ + M ++GL+P + Y+ ++
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
+ +A+++ ++ ++G+ PD Y +I+ LC +L AR++ M+ +SP
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
T+ +EA F K + ++ ++ P+ T+ ++ L ++P+
Sbjct: 400 DTFHAFLEAV----NFEKTLEVLGQM--------KISDLGPTEETFLLILGKLFKGKQPE 447
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
AL+I M + + Y A I G L KA E+ EM K
Sbjct: 448 NALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
V EA I R M ++P+ DSYS +IS F K + +L + EM +G+ P + Y
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
L+ +L + EA L +++ G+ P TY++++ C G+ +V +
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL--------DVARNV 386
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ SP++ T++A + + F ++ LE+L M L P E ++ ++ +
Sbjct: 387 LATMISENLSPTVDTFHAFLEAVNF----EKTLEVLGQMKISDLGPTEETFLLILGKLFK 442
Query: 303 IRELRKAFELKLEMDQKE 320
++ A ++ EMD+ E
Sbjct: 443 GKQPENALKIWAEMDRFE 460
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
+ AV L M G P + S++ C++ + ++ + KG F ++ +Y L+
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
I LC R+ E+ QEM G++P Y+ L+EA C L DE+
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM----- 458
Query: 244 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 303
+V +L TYN LI L +E+L + M E ++PDE Y ++I G +
Sbjct: 459 ---FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 304 RELRKAFEL 312
++ A E+
Sbjct: 516 TKIEAAMEV 524
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 12/243 (4%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
+ A + L +L EA+ V E + N ++ A + +P VE
Sbjct: 296 YRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPD----SAVEFLV 351
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
M P T + + C ++ + + L++ KG SYS +IS CK
Sbjct: 352 YMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAG 411
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 216
+ ++ EM +G+ PDV Y LI+ C + A+ L+ EM + G TY+
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYN 471
Query: 217 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 276
L+ +GE + L D+++++G P Y +LI GLC + + A+E
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERG--------IEPDETIYMSLIEGLCKETKIEAAME 523
Query: 277 ILR 279
+ R
Sbjct: 524 VFR 526
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 46/186 (24%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEK 80
++ G L S++ ++ LC G++RE+ L++M PD YN LI+A C+AE
Sbjct: 388 LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEM 447
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
+L+ +M V N TTY +IR + EE+ LRL +
Sbjct: 448 IRPAK-------KLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEES---LRLFDK----- 492
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
ML++GI PD Y LI+ LC + ++ A ++F
Sbjct: 493 ---------------------------MLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Query: 201 QEMLLR 206
++ + R
Sbjct: 526 RKCMER 531
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 129/288 (44%), Gaps = 21/288 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
S+N ++ G++ E E VL++M + PDC++Y+ LI+ + ++
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS------- 309
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
VE++ + + P+ Y +MI F +E++ R M ++ P+ ++YS+++S
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
K +++ ALE+ EML +G+ P ++ LC A ++Q+ G
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV-TYNALIHGLCFFQR 270
Y L++ G+ + ++ DE+ + G+ PS V Y ++ GLC
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY---------PSDVEVYEYIVDGLCIIGH 480
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
+ A+ ++ P+ YS + S + A++L L++ +
Sbjct: 481 LENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 86 IPYVR-IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD- 143
+ YVR +EL+ + + + ++ +++R C+R+ V A + A+KG P
Sbjct: 199 VHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSC 256
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
SY+ +IS + K E+ + ++ EM++ G PD +Y LI+ L R+ ++ ++F +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
+G P Y+ ++ + +F + ++ + P+L TY+ L+
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDE--------ECEPNLETYSKLVS 368
Query: 264 GLCFFQRPDEALEILRGM 281
GL ++ +ALEI M
Sbjct: 369 GLIKGRKVSDALEIFEEM 386
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 104/233 (44%), Gaps = 14/233 (6%)
Query: 95 YHQMCVRE--LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+ VRE ++ + +Y ++R R + +L+ M +G++P + + + F
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP-G 211
+ + +A+E+ E G+ ++ L++ LC + + A+ +F +G P
Sbjct: 197 VRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFD 254
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
+Y+ ++ + GE ++ + E+++ G F P ++Y+ LI GL R
Sbjct: 255 SCSYNIMISGWSKLGEVEEMEKVLKEMVESG--------FGPDCLSYSHLIEGLGRTGRI 306
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
++++EI + PD Y+A+I F R+ ++ M +E C P
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE-CEP 358
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 19/267 (7%)
Query: 54 EAVLEKMTDP---DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTY 110
E LE + D D +TY+T+I C N Y + +E + +M L P+E TY
Sbjct: 207 EMALEMVKDGVELDNITYSTII--TCAKRCNL-----YNKAIEWFERMYKTGLMPDEVTY 259
Query: 111 RSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 170
+++ ++ +VEE + + G P A ++S + F + + + EM
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
+ P+V Y L++ + + AR LF EML G++P +T LV+ Y
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 231 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML-LDPD 289
L +E+ K + + YN L++ +EA + M E + PD
Sbjct: 380 ALQLWEEMKAK--------KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPD 431
Query: 290 EVSYSAVISGFRRIRELRKAFELKLEM 316
SY+A+++ + + KA EL EM
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMELFEEM 458
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M + G+ +YS II+ + KA+E M G+ PD Y ++ + +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
+ E L++ + G P + L + + G++ + ++ E+
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS--------MDVK 323
Query: 253 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
P++V YN L+ + +P A + M E L P+E + +A++ + + R R A +L
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQL 383
Query: 313 KLEMDQKETCWPLD 326
EM K+ WP+D
Sbjct: 384 WEEMKAKK--WPMD 395
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 47/238 (19%)
Query: 27 AAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNH 82
A G + ++F+ + K G VL++M P+ V YNTL++A A K
Sbjct: 284 ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK-- 341
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAV--------------- 127
P + L+++M L+PNE T ++++++ +A+
Sbjct: 342 -PGLAR----SLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDF 396
Query: 128 ----GILRLMAEKGLSPHAD-----------------SYSRIISRFCKNKEMGKALEMKV 166
+L + A+ GL A+ SY+ +++ + + KA+E+
Sbjct: 397 ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFE 456
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
EML G+ +V L+Q L +R+ + +F + RG+ P R L+ L
Sbjct: 457 EMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMAL 514
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 119/243 (48%), Gaps = 20/243 (8%)
Query: 50 LREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVR--ELSPNE 107
+R E + + T V++N L+ A C KN + ++ +L+ ++ R ++ P++
Sbjct: 122 MRTFEQMDQYGTPRSAVSFNALLNA-CLHSKN------FDKVPQLFDEIPQRYNKIIPDK 174
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
+Y +I+ +CD E+A+ I+R M KG+ +++ I+S K E+ A + E
Sbjct: 175 ISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNE 234
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLE-ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
M+ KG D AY ++++ Q+ E ++L +EM G+ P +Y+ L+ AYC +G
Sbjct: 235 MVKKGCELDNAAYN--VRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERG 292
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 286
+ DE +K + + +P+ T+ LI LC+ + ++ I + M
Sbjct: 293 -------MLDEA-KKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHK 344
Query: 287 DPD 289
PD
Sbjct: 345 IPD 347
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 107 ETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 166
E Y ++IR + + A+ M + G A S++ +++ +K K ++
Sbjct: 102 EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFD 161
Query: 167 EMLDK--GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
E+ + I PD +YG+LI+ C +A ++ ++M +GM + T++ +
Sbjct: 162 EIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYK 221
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
KGE +L +E+++KG YN I + P+ E++ M M
Sbjct: 222 KGELEVADNLWNEMVKKGC--------ELDNAAYNVRIMS-AQKESPERVKELIEEMSSM 272
Query: 285 LLDPDEVSYSAVISGF 300
L PD +SY+ +++ +
Sbjct: 273 GLKPDTISYNYLMTAY 288
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE-MGKALEMKVEMLDK 171
+I+++ + E+ + M E +P +RI+ ++ + KA E+
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 172 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
G+ P+ +Y LL+Q C L A LF +ML R + P +Y L++ +C KG+ +
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 232 FHLQDEVIQKGFLP-----------------------YYVTSFSPSLVTYNALIHGLCFF 268
L D+++ KGF+P FSP N L+ G C F
Sbjct: 245 MELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF 304
Query: 269 QRPDEALEIL 278
+ +EA +++
Sbjct: 305 GKVEEACDVV 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
EL+ + + PN +Y +++ FC + + A + M E+ + P DSY +I F
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
C+ ++ A+E+ +ML+KG PD LI LC Q E + +EM+ +G SP
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 291
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+ LV+ +C G+ + + + V++ G
Sbjct: 292 SVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P+ +YN L++A C N + SI Y +L+ +M R++ P+ +Y+ +I+ FC + +
Sbjct: 188 PNTRSYNLLMQAFC---LNDDLSIAY----QLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
V A+ +L M KG P +I C + + EM+ KG P
Sbjct: 241 VNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 296
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV-FHLQDEV 238
L++ C ++ EA D+ + ++ G + T++ ++ C + E K+ L+D V
Sbjct: 297 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 353
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 58/351 (16%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGKL-REAEAVLEKMTD----PDCVTYNTLIKAACEAEKNH 82
+G LV++N+++ + G+ KL REA ++++M + P+ V+Y+TL+ E K
Sbjct: 254 SGITPDLVAYNSMIN-VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 83 NPSIPYVRI---------------VELYHQM-CVRE------------LSPNETTYRSMI 114
+ + +++Y Q+ V+E + PN +Y +++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
R++ + EA+ + RLM K + + +Y+ +I + K E KA + EM +GI
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY---CLKGEFSKV 231
P+ Y +I + +L A LFQ++ G+ Y T++ AY L G ++
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 232 FH---LQDEVIQKG-----------------FLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
H L D + ++ F + + + + +I+ QR
Sbjct: 493 LHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY 552
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 322
+E+ M PD + V++ + + RE KA + EM Q+E C
Sbjct: 553 VNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM-QEEGC 602
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 127/284 (44%), Gaps = 25/284 (8%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAA---CEAEKNHNPSIPY 88
+++ ++ EG A + L+KM D V Y+ LI+ + C+ Y
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD----------Y 241
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+ + ++ ++ ++P+ Y SMI ++ EA +++ M E G+ P+ SYS +
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
+S + +N + +AL + EM + D+ ++I + + EA LF + +
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
P +Y+T++ Y F + HL F ++VTYN +I
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHL--------FRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
++A +++ M ++P+ ++YS +IS + + +L +A L
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 40/287 (13%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P YN +++ A++ + L+ +M R L+P+ TY ++I F
Sbjct: 153 PSVFAYNVVLRNVLRAKQ-------FDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIIS---RFCKNKEMGKALEMKVEMLDKGIFPDVHA 179
+ A+ L+ M + +S YS +I R C + KA+ + + GI PD+ A
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVA 262
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK---VFHLQD 236
Y +I + + EAR L +EM G+ P +Y TL+ Y +F + VF
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 237 EV------------------------IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
EV + F P++V+YN ++ +
Sbjct: 323 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFG 382
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
EA+ + R M ++ + V+Y+ +I + + E KA L EM +
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 19/216 (8%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACE 77
++ + G E ++++ ++ GKL A + +K+ + D V Y T+I
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI----- 477
Query: 78 AEKNHNPSIPYVRIVELYH-QMCVRELS-PNETTYRSMIRLFCDRNRVEEAVGILRLMAE 135
+ Y R+ + H + + EL P+ + I + R EEA + R E
Sbjct: 478 --------VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFE 529
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
G + +I+ + +N+ +E+ +M G FPD + +++ QR +
Sbjct: 530 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 589
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
A +++EM G + ++ Y K +F V
Sbjct: 590 ADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMV 625
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 112/227 (49%), Gaps = 25/227 (11%)
Query: 57 LEKMTDP-DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVR--ELSPNETTYRSM 113
++K+ P V++N L+ A ++ + R+ +L+ + R ++P++ +Y +
Sbjct: 128 MDKLGTPRTVVSFNALLAACLHSD-------LFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
I+ +CD + E+A+ I+R M KG+ +++ I+ KN + +A + +EM++KG
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 174 FPDVHAYGLLIQLLCHQRRLLE-ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
D Y ++L+ + E ++L +EM G+ P +Y+ L+ AYC+KG S+
Sbjct: 241 DLDNTVYN--VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAK 298
Query: 233 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 279
+ + + Q P+ T+ LI LC D+ L + +
Sbjct: 299 KVYEGLEQ------------PNAATFRTLIFHLCINGLYDQGLTVFK 333
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 32 KGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
K +VS+N+++K G + A + ++M D D +++NT+I YV +
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG-------------YVHV 325
Query: 92 VELYHQMCVRELSPNET--TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ + PN ++ M+ + VE A R EK H S++ II
Sbjct: 326 SRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELA----RHYFEKTPEKHTVSWNSII 381
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ--EMLLRG 207
+ + KNK+ +A+++ + M +G PD H L LL L+ R Q +++++
Sbjct: 382 AAYEKNKDYKEAVDLFIRMNIEGEKPDPHT---LTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+ P ++ L+ Y GE + + DE+ K ++T+NA+I G F
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK-----------REVITWNAMIGGYAF 487
Query: 268 FQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
EAL + M + P +++ +V++
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 25/295 (8%)
Query: 32 KGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+ V++N ++ ++ +A + + M D VT+NT+I S +R
Sbjct: 69 RNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV--------SCGGIRF 120
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+E ++ S + ++ +MI + R+ EA+ + M E+ +A S+S +I+
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITG 176
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM--LLRGMS 209
FC+N E+ A V + K D L+ L RL EA + + L+ G
Sbjct: 177 FCQNGEVDSA----VVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEV---IQKGFLPYYVTSFSPSLVTYNALIHGLC 266
Y+TL+ Y +G+ L D++ + F ++V++N++I
Sbjct: 233 DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA-- 290
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 321
+ + D + R + + + D D +S++ +I G+ + + AF L EM ++
Sbjct: 291 YLKVGD--VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLF-------CDRNRVEEAVGILRLMAEKGLSPHADS 144
+E+Y + PN +Y ++ F R V +L M +KGL P
Sbjct: 401 LEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRH 460
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
++ ++ K E A+++ M+D G P V +YG L+ L + EA ++ M+
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P Y T+ + +F+ + L E+ KG PS+VT+NA+I G
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI--------EPSVVTFNAVISG 572
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
A E M ++P+E++Y +I + R A+EL ++
Sbjct: 573 CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVK 623
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 16/220 (7%)
Query: 10 TVATLKTFWNVPIRGFTAAGTEKGLV----SFNAVVKRLCGEGKLREAEAVLEKMTD--- 62
+ A+ + W +R +KGL +NAV+ + A + + M D
Sbjct: 431 SAASKRGIWRWGVRLLNKM-EDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGE 489
Query: 63 -PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRN 121
P ++Y L+ +A E K ++ + +++ M + PN Y +M + +
Sbjct: 490 KPTVISYGALL-SALEKGKLYDEAF------RVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
+ +L+ MA KG+ P +++ +IS +N G A E M + + P+ Y
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
+LI+ L + + A +L + G+ + YD +V++
Sbjct: 603 MLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 57/285 (20%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMT---DPDCVTYNTLIKAACEAEKNHNPSIPYV 89
G+ FN +++ C E +++EA ++ EK+ +PD T N L+ EA V
Sbjct: 175 GVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGD--------V 226
Query: 90 RIVEL-YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLM--------------- 133
EL YH+M R PN TY I FC + EA+ + M
Sbjct: 227 TATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTL 286
Query: 134 --------------------AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
+++GL+P +Y+ ++S K ++ A+++ EM +KGI
Sbjct: 287 IHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Query: 174 FPD-VHAYGLLIQLLCHQRRLLEAR-DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
PD V + + I ++ + + +Q+M R + P T L++ +C GE +
Sbjct: 347 EPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLG 406
Query: 232 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 276
L +++KG+ P+ + L+T LC +R ++A E
Sbjct: 407 LDLWKYMLEKGYCPH---GHALELLTT-----ALCARRRANDAFE 443
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 13/220 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNP 84
G + V++ + C + EA + E M D TLI + A
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK--- 296
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
++ +L+ ++ R L+P+ Y +++ V A+ +++ M EKG+ P + +
Sbjct: 297 ----IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352
Query: 145 YSRIISRFCKNKEMG--KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+ + K+KE G E +M ++ + P +L++L CH + DL++
Sbjct: 353 FHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKY 412
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
ML +G P G + L A C + + F + +++G
Sbjct: 413 MLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV--- 166
+ ++R FC ++EA I + + +P + + ++ F KE G ++
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGF---KEAGDVTATELFYH 234
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
EM+ +G P+ YG+ I C +R EA LF++M + TL+ +
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 286
K L DE+ ++G +P YNAL+ L A+++++ M E +
Sbjct: 295 NKIKARQLFDEISKRGL--------TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Query: 287 DPDEVSYSAVISGFRRIREL 306
+PD V++ ++ G + +E
Sbjct: 347 EPDSVTFHSMFIGMMKSKEF 366
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 132 LMAE-KGLSPHADSYSRIISRFCKNKEMG---KALEMKVEMLDKGIFPD---VHAYGLLI 184
LMAE + P+ S+ + CK + G + LE V+M +K IF V + +L+
Sbjct: 125 LMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM-EKEIFRKKFGVDEFNILL 183
Query: 185 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
+ C +R + EAR +F+++ R +P +T + L+ + G+ + E++++GF
Sbjct: 184 RAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGF- 241
Query: 245 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
P+ VTY I G C + EAL + M + D + +I G R
Sbjct: 242 -------KPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 305 ELRKAFELKLEMDQK 319
KA +L E+ ++
Sbjct: 295 NKIKARQLFDEISKR 309
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 11/231 (4%)
Query: 5 LRVSSTVATLKTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-- 62
L+V S L T W + G + VSFN +K C G L A + +M
Sbjct: 148 LQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSG 207
Query: 63 --PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDR 120
PD VTY TLI A + E+ V L++ M ++ PN TT+ I+ +R
Sbjct: 208 LTPDVVTYTTLISALYKHER-------CVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNR 260
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
R +A +L LM + + P + +Y+ +I F + A + M KG P++ Y
Sbjct: 261 RRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIY 320
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
+I LC A + ++ + + P T + L++ KG+ +
Sbjct: 321 QTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQA 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 172 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
GI D ++ + I+ C L A +EM G++P TY TL+ A +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISA---------L 222
Query: 232 FHLQDEVIQKGFLPYYV-TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
+ + VI G V P+L T+N I L +R +A ++L MP++ ++PD
Sbjct: 223 YKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDS 282
Query: 291 VSYSAVISGF 300
++Y+ VI GF
Sbjct: 283 ITYNMVIKGF 292
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 67 TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEA 126
YN ++ C+ + +P + ++ +M R + N T+ +I C R EEA
Sbjct: 282 AYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEA 341
Query: 127 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG---IFPDVHAYGLL 183
+ + M E G P A++Y +I + +G+ EM +M G + YG L
Sbjct: 342 MTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFL 401
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
++LC RL A +F+ M G PG +TYD L+ C + ++ L E +KG
Sbjct: 402 -KILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKG 459
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 137 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 196
GL +S + ++ + C+ A +M V+ IFPD + LLI C +L EA
Sbjct: 206 GLKRDKESLTLVVKKLCEKGHASIAEKM-VKNTANEIFPDENICDLLISGWCIAEKLDEA 264
Query: 197 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 256
L EM G G + Y+ +++ C F LQ EV +K L +
Sbjct: 265 TRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEV-EKVLLEMEFRGVPRNTE 323
Query: 257 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
T+N LI+ LC +R +EA+ + M E PD +Y +I
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLI 364
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 115/302 (38%), Gaps = 32/302 (10%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMTDP-----DCVTYNTLIKAACEAEKNHNPSIP 87
G + + + RL G+ ++ EKM + D + ++K CE K H
Sbjct: 174 GGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCE--KGH----- 226
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
I E + E+ P+E +I +C +++EA + M+ G +Y+
Sbjct: 227 -ASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNM 285
Query: 148 IISRFCK----------NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
++ CK E+ K L +EM +G+ + + +LI LC RR EA
Sbjct: 286 MLDCVCKLCRKKDPFKLQPEVEKVL---LEMEFRGVPRNTETFNVLINNLCKIRRTEEAM 342
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
LF M G P TY L+ + + + D++ G+ +
Sbjct: 343 TLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELL------NKKE 396
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
Y + LC +R + A+ + + M P +Y ++ +L +A L E
Sbjct: 397 YYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAA 456
Query: 318 QK 319
+K
Sbjct: 457 KK 458
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNP 84
G + +FN ++ LC + EA + +M + PD TY LI++ +A +
Sbjct: 317 GVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEG 376
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+++ EL N+ Y +++ C R+E A+ + + M G P +
Sbjct: 377 D----EMIDKMKSAGYGELL-NKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKT 431
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGI 173
Y ++ + C N ++ +A + E KGI
Sbjct: 432 YDLLMGKMCANNQLTRANGLYKEAAKKGI 460
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 51/319 (15%)
Query: 36 SFNAVVKRLCGEGKLREAEAVL---EKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
++A + G L EAE V +++ + YN +IKA + S +
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKA-------YGISKSCEKAC 525
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
EL+ M ++P++ TY +++++ + + L M E G Y +IS F
Sbjct: 526 ELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSF 585
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
K ++ A E+ EM++ I PDV YG+LI + +A + M G+
Sbjct: 586 VKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS 645
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQD-EVIQKGFLPYYVTSFSPSLVTYNALIH-------- 263
Y++L++ Y +KV +L + E I + L + P + T N +I+
Sbjct: 646 VIYNSLIKLY------TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMV 699
Query: 264 -----------------------GLCFFQ---RPDEALEILRGMPEMLLDPDEVSYSAVI 297
LC ++ R +EA +I + M EM + D +SY++V+
Sbjct: 700 RKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Query: 298 SGFRRIRELRKAFELKLEM 316
F ++A E EM
Sbjct: 760 GLFALDGRFKEAVETFKEM 778
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 124/312 (39%), Gaps = 41/312 (13%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRI 91
++N ++ G+++EA ++M + P VT+NT+I +N + +
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIY-----GNNGQLG--EV 352
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
L M + +P+ TY +I L N +E A + M + GL P SY ++
Sbjct: 353 TSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYA 411
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSP 210
F + +A + EM D + D + L ++ L ++ F+ + G MS
Sbjct: 412 FSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS 471
Query: 211 GGRTYDTLVEAYCLKG---EFSKVFHLQDEVIQKGFLPYYVT------------------ 249
G Y ++AY +G E +VF EV ++ + Y V
Sbjct: 472 EG--YSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFE 529
Query: 250 -----SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 304
+P TYN L+ L P + L M E D + Y AVIS F ++
Sbjct: 530 SMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLG 589
Query: 305 ELRKAFELKLEM 316
+L A E+ EM
Sbjct: 590 QLNMAEEVYKEM 601
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 133/324 (41%), Gaps = 54/324 (16%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNH--- 82
++ ++ +N ++K +A + E M PD TYNTL++ A+ H
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGR 560
Query: 83 ------------NPSIPYVRIV-------------ELYHQMCVRELSPNETTYRSMIRLF 117
+ IPY ++ E+Y +M + P+ Y +I F
Sbjct: 561 CYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 118 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML---DKGIF 174
D V++A+ + M E G+ ++ Y+ +I + K + +A + ++L +K +
Sbjct: 621 ADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 234
PDV+ +I L + + +A +F M RG T+ ++ Y G F + +
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
++ + L P ++YN+++ R EA+E + M + PD+ ++
Sbjct: 740 AKQMREMKILT------DP--LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFK 791
Query: 295 AVIS----------GFRRIRELRK 308
++ + R+I E+RK
Sbjct: 792 SLGTILMKLGMSKKAVRKIEEIRK 815
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 17/251 (6%)
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ L+ +M + + P +TY ++I ++ A+ L M++ G+ P + ++
Sbjct: 206 VQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQ 265
Query: 151 RFCKNKEMGKALEM------KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+ K +E KA E D + + Y +I ++ EA + F+ ML
Sbjct: 266 MYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML 325
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+ P T++T++ Y G+ +V L + +P TYN LI
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSL---------MKTMKLHCAPDTRTYNILISL 376
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+ A + M + L PD VSY ++ F + +A L EMD
Sbjct: 377 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNV--E 434
Query: 325 LDQDTNESLVK 335
+D+ T +L +
Sbjct: 435 IDEYTQSALTR 445
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 19/209 (9%)
Query: 22 IRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD-------PDCVTYNTLIKA 74
+ AG V +N+++K G L EAEA+ K+ PD T N +I
Sbjct: 633 VEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINL 692
Query: 75 ACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
E VR E + NE T+ M+ ++ R EEA I + M
Sbjct: 693 YSER--------SMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMR 744
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY----GLLIQLLCHQ 190
E + SY+ ++ F + +A+E EM+ GI PD + +L++L +
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSK 804
Query: 191 RRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
+ + + ++ ++ + RG+ T +LV
Sbjct: 805 KAVRKIEEIRKKEIKRGLELWISTLSSLV 833
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 42/317 (13%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+ F+ VV+ G L EA +VLE M + PD + +++ + + Y
Sbjct: 594 IGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYY 653
Query: 90 RI--------VELYH---QMCVREL-----------------SPNETTYRSMIRLFCDRN 121
RI E+Y+ C R L +PN T+ ++ ++ +
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY-GKA 712
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
++ + V L L+A++ SY+ II+ + KNK+ M G + AY
Sbjct: 713 KLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYN 772
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
L+ +++ + R + + M P TY+ ++ Y +G +V + E+ +
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
G P L +YN LI +EA+ +++ M + PD+V+Y+ +++ R
Sbjct: 833 GL--------GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALR 884
Query: 302 RIRELRKAFELKLEMDQ 318
R E +A + L M Q
Sbjct: 885 RNDEFLEAIKWSLWMKQ 901
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 47/275 (17%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
+++N V++ L GK EA +K +K HNP
Sbjct: 311 MAYNYVLEALSENGKFDEA------------------LKLFDAVKKEHNPP--------- 343
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
R L+ N T+ M+ +C + EEA+ + R M + SP S++ ++++ C
Sbjct: 344 ------RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCD 397
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
N+ + +A ++ EM +K + PD + YGLL+ + ++ E ++ M+ + P
Sbjct: 398 NELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAV 457
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 274
Y+ L + G+ K F V+ Y ++ L R DE
Sbjct: 458 YNRLQDQLIKAGKLDDA---------KSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEM 508
Query: 275 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
L+I+ M LD D V S + F + ELRK
Sbjct: 509 LKIVDEM----LDDDTVRVSEELQEFVK-EELRKG 538
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRE-LSPNETTYRSMIRLFCDRN 121
P+ +TYN + +A + K P I +E Y L+P+ T+R +++ +
Sbjct: 163 PNIITYNLIFQAYLDVRK---PEIA----LEHYKLFIDNAPLNPSIATFRILVKGLVSND 215
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK--GIFPDVHA 179
+E+A+ I MA KG YS ++ KN + L++ E+ +K G D
Sbjct: 216 NLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVV 275
Query: 180 YGLLIQLLCHQRRLLEARDLFQEMLLRG--MSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 237
YG L++ + EA + ++E + + Y+ ++EA G+F + L D
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDA 335
Query: 238 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
V ++ P ++ + +L T+N +++G C + +EA+E+ R M + PD +S++ ++
Sbjct: 336 VKKEHNPPRHL---AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLM 392
Query: 298 SGFRRIRELRKAFELKLEMDQK 319
+ L +A +L EM++K
Sbjct: 393 NQLCDNELLAEAEKLYGEMEEK 414
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPY 88
L +FN +V C GK EA V +M D PD +++N L+ C+ E
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNEL-------L 401
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+LY +M + + P+E TY ++ +++E + M E L P+ Y+R+
Sbjct: 402 AEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRL 461
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+ K ++ A +M+ + D AY +++ L RL E + EML
Sbjct: 462 QDQLIKAGKLDDAKSF-FDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E++ +M L PN +M+ C V+EA+ + LM +KG P Y+ ++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
CK ++ A + +M + GI P+ +YG+L+Q L + L +A EML G SP
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
T+ LV+A C + D + QKGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++L+ M + P Y +++ FC +++E+A I R M G++P+A SY ++
Sbjct: 151 MKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQG 210
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ A+ EML+ G P+V + L+ LC + + +A+ + +G +
Sbjct: 211 LYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E++ +M L PN +M+ C V+EA+ + LM +KG P Y+ ++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
CK ++ A + +M + GI P+ +YG+L+Q L + L +A EML G SP
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
T+ LV+A C + D + QKGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
++L+ M + P Y +++ FC +++E+A I R M G++P+A SY ++
Sbjct: 151 MKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQG 210
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ A+ EML+ G P+V + L+ LC + + +A+ + +G +
Sbjct: 211 LYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 8/211 (3%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
Y S++ CD A ++R M KGL P +Y+ +++ +C +M +A E EM
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+G P LLI+ L + L A+++ +M G P +T++ L+EA GE
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
+ + G + TY LI + + DEA +L E P
Sbjct: 304 EFCIEMYYTACKLG--------LCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP 355
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
Y+ +I G R AF +M K
Sbjct: 356 FPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEA 78
RGF + L+ ++ L G L A+ ++ KMT PD T+N LI+A ++
Sbjct: 246 RGFNPPARGRDLL-----IEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKS 300
Query: 79 EKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGL 138
+ + + +E+Y+ C L + TY+++I +++EA +L E G
Sbjct: 301 GE-----VEFC--IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGH 353
Query: 139 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 198
P Y+ II C+N A +M K P+ Y +LI + + ++A +
Sbjct: 354 KPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAAN 413
Query: 199 LFQEMLLRGMSPGGRTYDTLVEA 221
EM G+ P R +D + +
Sbjct: 414 YLVEMTEMGLVPISRCFDMVTDG 436
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 57 LEKMTDPDCV-TYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIR 115
LE+ P V + N L+ A A+ + Y+ + ++Y + P+ TY MIR
Sbjct: 137 LEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG------IEPDLETYNRMIR 190
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
+ C+ + I+ M K + P A S+ +I F K ++ + ++ M + G+
Sbjct: 191 VLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHV 250
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
V Y ++IQ LC +++ EA+ L ++ M P TY L+ +C + + +L
Sbjct: 251 GVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLF 310
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+ ++ G + P Y LIH LC
Sbjct: 311 EVMVCNG--------YKPDSECYFTLIHCLC 333
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 22/294 (7%)
Query: 30 TEKGLVSFNA---VVKRLCGEGKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNH 82
+ G +SFNA V++ L KL A +K + C TYN L+
Sbjct: 236 SSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFL------ 289
Query: 83 NPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 142
N +PY + E+Y M + + +TY +I R++ A + + M E+ L P
Sbjct: 290 NKGLPY-KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSF 348
Query: 143 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
+S ++ K + ++++ +EM G P + LI +L A L+ E
Sbjct: 349 SVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE 408
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
M G P Y ++E++ G+ + ++ + GFLP +PS TY+ L+
Sbjct: 409 MKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP------TPS--TYSCLL 460
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+ D A++I M L P SY ++++ R + A ++ LEM
Sbjct: 461 EMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D N LIK CE+ ++L + ++ PN T+ +IR FC++ +
Sbjct: 201 DACCLNILIKGLCESGNLEAA-------LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF 253
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
EEA +L M ++ + P +++ +IS K + + +++ M KG P+ Y +
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 243
+ L ++R LEA+++ +M+ GM P +Y +V C ++ + +++ GF
Sbjct: 314 LYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Query: 244 LP 245
+P
Sbjct: 374 VP 375
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNP 84
G E N ++K LC G L A +L++ + P+ +T++ LI+ C K
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK---- 252
Query: 85 SIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 144
+ +L +M + P+ T+ +I + RVEE + +L M KG P+ +
Sbjct: 253 ---FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGT 309
Query: 145 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
Y ++ K +A EM +M+ G+ P +Y ++ LC + ++E + ++M+
Sbjct: 310 YQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMV 369
Query: 205 LRGMSPGGRTYDTLVEAYCLKG 226
G P + +V+ K
Sbjct: 370 NHGFVPKTLMWWKVVQCVVSKN 391
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 11/226 (4%)
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN--KEM 158
++ P E+ Y MI F +E ++R + + ++ + + R N +
Sbjct: 89 KDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRI 148
Query: 159 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 218
+A+E+ M D G +P ++ ++ LL + E +F G+ + L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 219 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 278
++ C G L DE Q+ P+++T++ LI G C + +EA ++L
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQ--------KSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 279 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
M + ++PD ++++ +ISG R+ + + +L LE + + C P
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDL-LERMKVKGCEP 305
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 106 NETTYRSMIRLFCD-RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
+E + +++R++ + R+ A+ IL M + G P + S++ I++ K + ++
Sbjct: 130 SEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKI 189
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
V G+ D +LI+ LC L A L E + P T+ L+ +C
Sbjct: 190 FVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCN 249
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
KG+F + F L + + ++ P +T+N LI GL R +E +++L M
Sbjct: 250 KGKFEEAFKLLERMEKE--------RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK 301
Query: 285 LLDPDEVSYSAVISGF 300
+P+ +Y V+ G
Sbjct: 302 GCEPNPGTYQEVLYGL 317
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 25 FTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEK 80
F + +++F+ +++ C +GK EA +LE+M +PD +T+N LI + +
Sbjct: 228 FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
++L +M V+ PN TY+ ++ D+ R EA ++ M G+ P
Sbjct: 288 VEEG-------IDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 185
SY +++ C+ K + + + +M++ G P + ++Q
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
+I+ C+ +E A+ +L ++ P+ ++S +I FC + +A ++ M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 232
I PD + +LI L + R+ E DL + M ++G P TY ++ K +
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 233 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 292
+ ++I G PS ++Y ++ GLC + E +LR M P +
Sbjct: 328 EMMSQMISWG--------MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLM 379
Query: 293 YSAVI 297
+ V+
Sbjct: 380 WWKVV 384
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+F ++K C GK++EA ++ ++ + D + L+K C A N + + I
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRA----NRMVDALEI 386
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
V++ M R+L + Y +I + +N V +A+ ++ + G P +Y+ I+
Sbjct: 387 VDI---MKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQH 442
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
K K+ K + EM++ GI PD A ++ Q R+ EA +F M +G+ P
Sbjct: 443 LFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPT 502
Query: 212 GRTYDTLVEAYCLKGEFSKVF------HLQDEVIQKGFLPYYVTSFSPS 254
++Y V+ C + ++ H VI+ + ++S +
Sbjct: 503 WKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKN 551
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 18/225 (8%)
Query: 44 LCGEGKLREAEAVLE---KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCV 100
LC G ++A++ L+ K+ P V Y+ I+A C K + EL
Sbjct: 795 LCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEA------LSELASFEGE 848
Query: 101 RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 160
R L ++ TY S++ R +++A+ + M E G P Y+ +I F K K++ K
Sbjct: 849 RSL-LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 161 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 220
LE +M + P V Y +I ++ EA + F+ M RG SP +TY +
Sbjct: 908 VLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Query: 221 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
C + L E++ KG +PS + + + +GL
Sbjct: 968 CLCQACKSEDALKLLSEMLDKG--------IAPSTINFRTVFYGL 1004
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 110 YRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 169
Y +M+ + + ++ ++ M + G +++ +IS + K K++GK L + +M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 170 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
G D AY ++I+ LC R A + ++EM+ +G++ G RTY L++ +
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 230 KVFHLQD------EVIQKGFLPYYVTSFSPS--------LVT-------------YNALI 262
V + D E+ + Y + SF S L+ + L+
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 263 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
GLC R +ALEI+ M LD V Y +ISG+ R ++ KA E
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALE 419
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 122/293 (41%), Gaps = 51/293 (17%)
Query: 62 DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRN 121
D D T+ LI +A+K + ++ +M + T Y MIR C
Sbjct: 221 DKDIRTWTILISVYGKAKKIGKGLL-------VFEKMRKSGFELDATAYNIMIRSLCIAG 273
Query: 122 RVEEAVGILRLMAEKGLS-----------------------------------PHADSYS 146
R + A+ + M EKG++ D++
Sbjct: 274 RGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFG 333
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ FC + ++ +ALE+ E+ +K + D + +L++ LC R+++A ++ M R
Sbjct: 334 YLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR 393
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+ Y ++ Y + + SK Q EVI+K P P + TY ++ L
Sbjct: 394 KLDDSN-VYGIIISGYLRQNDVSKALE-QFEVIKKSGRP-------PRVSTYTEIMQHLF 444
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
++ ++ + M E ++PD V+ +AV++G + +A+++ M++K
Sbjct: 445 KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEK 497
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 131/318 (41%), Gaps = 41/318 (12%)
Query: 28 AGTEKGLVSFNAVVKRLCGEGK----LREAEAVLEKMTDPDCVTYNTLIKAACEAEKN-- 81
+G E ++N +++ LC G+ L + ++EK TY L+ ++EK
Sbjct: 253 SGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDV 312
Query: 82 -HNPSIPYVRIVE---------LYHQMCV-----------RELSPNETT-----YRSMIR 115
+ + VRI E L CV REL E + +++
Sbjct: 313 VQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVK 372
Query: 116 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
C NR+ +A+ I+ +M + L ++ Y IIS + + ++ KALE + G P
Sbjct: 373 GLCRANRMVDALEIVDIMKRRKLDD-SNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPP 431
Query: 176 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 235
V Y ++Q L ++ + +LF EM+ G+ P +V + + ++ + +
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Query: 236 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 295
+ +KG P+ +Y+ + LC R DE ++I M + + +S
Sbjct: 492 SSMEEKG--------IKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSW 543
Query: 296 VISGFRRIRELRKAFELK 313
VIS + E K +K
Sbjct: 544 VISSMEKNGEKEKIHLIK 561
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 14/236 (5%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P T+ LI CE +K N + +M P+ + + C+
Sbjct: 746 PSSSTFKCLITVLCE-KKGRNVE----EATRTFREMIRSGFVPDRELVQDYLGCLCEVGN 800
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
++A L + + G P +YS I C+ ++ +AL + D + YG
Sbjct: 801 TKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGS 859
Query: 183 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
++ L + L +A D M G PG Y +L+ + + + KV E QK
Sbjct: 860 IVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVL----ETCQK- 914
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 298
S PS+VTY A+I G + +EA R M E PD +YS I+
Sbjct: 915 ---MEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGIL-RLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 163
P Y IR C ++EEA+ L E+ L +Y I+ + ++ KAL+
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQY-TYGSIVHGLLQRGDLQKALD 875
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
M + G P VH Y LI +++L + + Q+M P TY ++ Y
Sbjct: 876 KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYM 935
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
G+ + ++ + ++G SP TY+ I+ LC + ++AL++L M +
Sbjct: 936 SLGKVEEAWNAFRNMEERGT--------SPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 284 MLLDPDEVSYSAVISGFRR 302
+ P +++ V G R
Sbjct: 988 KGIAPSTINFRTVFYGLNR 1006
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 32/173 (18%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLI--------------KAAC 76
V+++ ++ LC GKL EA + L D TY +++ K
Sbjct: 820 VAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNS 879
Query: 77 EAEKNHNPSIPYV--------------RIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
E P + +++E +M P+ TY +MI + +
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 175
VEEA R M E+G SP +YS+ I+ C+ + AL++ EMLDKGI P
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ-- 190
M +G D+++ +I ++ + A+ EM D G+ P + LI +LC +
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 191 RRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 250
R + EA F+EM+ G P + C G D + + GF
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF------- 816
Query: 251 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 310
P V Y+ I LC + +EAL L D+ +Y +++ G + +L+KA
Sbjct: 817 --PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKAL 874
Query: 311 E 311
+
Sbjct: 875 D 875
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
Y + +E+Y M PN M+ + N V A+ I + + S+
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFF----SFDI 179
Query: 148 IISRFCKNKEMGKALEMKV---EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
+S FC G + +K+ M+ +G +P+ +G +++L C + EA + M+
Sbjct: 180 ALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMI 239
Query: 205 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 264
G+S + LV + GE K L +++IQ G SP+LVTY +LI G
Sbjct: 240 CSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGC--------SPNLVTYTSLIKG 291
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI---RELRKAF 310
DEA +L + L PD V + +I + R+ E RK F
Sbjct: 292 FVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVF 340
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 117 FCDRNRVEEAVGI---LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
FC R + VG+ L+ M +G P+ + + +I+ C+ + +A ++ M+ GI
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGI 243
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
V+ + +L+ +A DLF +M+ G SP TY +L++ + G + F
Sbjct: 244 SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
+ +V +G +P +V N +IH R +EA ++ + + L PD+ ++
Sbjct: 304 VLSKVQSEG--------LAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 294 SAVIS 298
++++S
Sbjct: 356 ASILS 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 18 WNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACE 77
+++ + F + G LV V+KR+ GEG E + + + C
Sbjct: 177 FDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQIL--------RLCCRTGCV 228
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+E ++V L M +S + + ++ F ++AV + M + G
Sbjct: 229 SEA--------FQVVGL---MICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG 277
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
SP+ +Y+ +I F + +A + ++ +G+ PD+ L+I R EAR
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEAR 337
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 231
+F + R + P T+ +++ + CL G+F V
Sbjct: 338 KVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLV 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKM-TDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
+F +++ LC GK + + TD D VT N L + C ++ +N +++
Sbjct: 354 TFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLL--SNCFSKIGYNSYA-----LKV 406
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
M ++ + + TY + C A+ + +++ ++ A +S II +
Sbjct: 407 LSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIE 466
Query: 155 NKEMGKALEM-KVEMLDKGIFP-DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
+ A+ + K +L+K +P DV +Y + I+ L +R+ EA L +M G+ P
Sbjct: 467 LGKYNTAVHLFKRCILEK--YPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNR 524
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
RTY T++ C + E KV + E IQ+G
Sbjct: 525 RTYRTIISGLCKEKETEKVRKILRECIQEG 554
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 20/304 (6%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVE 93
N+++ L GKL + ++M PD VTYNTL+ A C KN P + +E
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL-AGCIKVKNGYP-----KAIE 223
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L ++ + + Y +++ + R EEA ++ M +G SP+ YS +++ +
Sbjct: 224 LIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS 283
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
+ KA E+ EM G+ P+ L+++ +R+L E+ G +
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
Y L++ G+ + + D++ KG ++ S+ +I LC +R E
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRS---DGYANSI-----MISALCRSKRFKE 395
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 333
A E+ R D V + ++ + R E+ + +MD++ P D +T L
Sbjct: 396 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS-P-DYNTFHIL 453
Query: 334 VKDF 337
+K F
Sbjct: 454 IKYF 457
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 28/251 (11%)
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
+ +E+Y + N S++ +++ + + M GL P +Y+ ++
Sbjct: 149 KALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL 208
Query: 150 SRFCKNKE-MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
+ K K KA+E+ E+ GI D YG ++ + R EA + Q+M + G
Sbjct: 209 AGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGH 268
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------------------- 248
SP Y +L+ +Y KG++ K L E+ G +P V
Sbjct: 269 SPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRE 328
Query: 249 -------TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 301
++ + + Y L+ GL + +EA I M + D + S +IS
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 302 RIRELRKAFEL 312
R + ++A EL
Sbjct: 389 RSKRFKEAKEL 399
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 136 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 195
+G+ P +D +I C+ + + A + ++M+ KG P + L++ L E
Sbjct: 370 RGIKPFSD----VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 425
Query: 196 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 255
A+++ + M RG+ P TY ++ Y G + + E +K SP
Sbjct: 426 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH------KKLSP-- 477
Query: 256 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF-RRIRELRKAFELKL 314
VTY+ALI G C + DEAL++L M + P+ Y+ +I F + + KA L
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFE 537
Query: 315 EMDQK 319
EM QK
Sbjct: 538 EMKQK 542
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 112 SMIRLFCDRNRVEEAVGILRL--MAEKGLSPHADSYSRIISRFCKNK-EMGKALEMKVEM 168
++I FC + EEA + L EK L P + +I+ CKN + A EM ++
Sbjct: 306 NIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF--VATLITALCKNDGTITFAQEMLGDL 363
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
+ + + +I LC R + +A+ L +M+ +G +PG ++ +V A G+
Sbjct: 364 SGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDL 423
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
+ + + +G P + TY +I G DEA EIL +
Sbjct: 424 DEAKEVLKLMESRG--------LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKL 475
Query: 289 DEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
V+Y A+I G+ +I E +A +L EMD+
Sbjct: 476 SPVTYHALIRGYCKIEEYDEALKLLNEMDR 505
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 40 VVKRLCGEGKLREAEAVLE------KMTDPDCVTYNTLIKAACEAEKNHNPSIPYVR--I 91
++ C EGK EA +V E K P V TLI A C+ ++ +I + + +
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCK----NDGTITFAQEML 360
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+L + R + P + +I C V++A +L M KG +P ++ ++
Sbjct: 361 GDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
K ++ +A E+ M +G+ PDV+ Y ++I + EA+++ E +
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLS 476
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 271
TY L+ YC E+ + L +E+ + G P+ YN LI C
Sbjct: 477 PVTYHALIRGYCKIEEYDEALKLLNEMDRFG--------VQPNADEYNKLIQSFCLKALD 528
Query: 272 DEALEIL 278
E E+L
Sbjct: 529 WEKAEVL 535
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
+I LF + + A + E G +P+A +Y + CK M A + +ML G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 173 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC--------- 223
+ + G +I C + + EA +++ + S R TL+ A C
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 224 ------LKGE--------FSKVFH----LQDEVIQKGFLPYYVTSF-SPSLVTYNALIHG 264
L GE FS V H +++ K L ++ +P +N ++H
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
DEA E+L+ M L PD +Y+ +ISG+ + + +A E+ E +K
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK 471
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 98 MCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY-SRIISRFCKNK 156
M + + PN + R++ CD V++A+ + ++M KG + + ++I+
Sbjct: 970 MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKG 1029
Query: 157 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 216
E+ KA + + G+ Y +I+ L + L A L ML PG +YD
Sbjct: 1030 EIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYD 1087
Query: 217 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 276
+++ + K E+++ G SPS+ T++ L+H C + E+
Sbjct: 1088 SVINGLLRYNQLDKAMDFHTEMVELGL--------SPSISTWSGLVHKFCEACQVLESER 1139
Query: 277 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD 336
+++ M + P + + VI FR + KA E+ +EM QK + +D +T+ SL+ +
Sbjct: 1140 LIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEM-MEMMQK-CGYEVDFETHWSLISN 1197
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 24/287 (8%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
+N ++K LC E K A A+L++M D P + LI C A K
Sbjct: 742 YNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTA-------- 793
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+ E + + ++I+ ++ +A LR+M GLS + Y+ + +
Sbjct: 794 -----FNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGY 848
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
CK K E+ M+ K I V +Y ++ +C + + L A L + +LL +PGG
Sbjct: 849 CKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGG 908
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
++ Y + + HL+ + K L P T+N L+HG
Sbjct: 909 VIIYNMLIFYMFRAK----NHLE---VNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYS 961
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
+L L M + P+ S AV S +++KA +L M+ K
Sbjct: 962 SSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESK 1008
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELY 95
S AV LC G +++A + + M +++++ IP E +
Sbjct: 981 SLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKA---EDF 1037
Query: 96 HQMCVRE--LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
R ++PN Y ++I+ DR ++ AV +L M + P + SY +I+
Sbjct: 1038 LTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLL 1094
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
+ ++ KA++ EM++ G+ P + + L+ C ++LE+ L + M+ G SP
Sbjct: 1095 RYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQE 1154
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 252
+ T+++ + ++ K + + + + G+ + T +S
Sbjct: 1155 MFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWS 1193
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
S+ +VK C ++ A V+EKM + + ++ + A + + + + +
Sbjct: 374 TSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADILHSLLHA---IDEVLEFDLVRRI 430
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
+ MC + + PN +RS+IRL E A +L + L P++ ++ I++ + +
Sbjct: 431 HSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFR 490
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
K + AL + +M + G+ PD +G LI C Q + ++EM G+ R
Sbjct: 491 EKNVSSALMVVKQMKEAGVKPDSITFGYLIN-NCTQEDAITK--YYEEMKQAGVQATKRI 547
Query: 215 YDTLVEAYCLKGEFSK 230
Y +L++AY G+F K
Sbjct: 548 YMSLIDAYAASGKFEK 563
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 24/280 (8%)
Query: 18 WNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACE 77
+N+ I GF G +S +++E +V PD TYN+LI C
Sbjct: 251 YNICIHGFGCWGDLDAALSLFK---------EMKERSSVYGSSFGPDICTYNSLIHVLCL 301
Query: 78 AEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
K + I ++ ++ V P+ +TYR +I+ C R+++A+ I M G
Sbjct: 302 FGKAKDALI-------VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNG 354
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
P Y+ ++ K +++ +A ++ +M+ +G+ Y +LI L R
Sbjct: 355 FVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
LF ++ +G T+ + C +G+ L +E+ +G FS LVT
Sbjct: 415 TLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRG--------FSVDLVT 466
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
++L+ G R D ++++ + E L P+ + ++A +
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
++ E+++ M V +L+ TY SM+ F + + A G+L M E + +Y+ II
Sbjct: 615 KLFEIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 150 SRFCKNKEMGKALEMKVEMLDK----GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 205
K MG+A ++ +LD+ G + D+ Y LI L RL EA LF M
Sbjct: 673 QGLGK---MGRA-DLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKS 728
Query: 206 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
G++P +Y+T++E G+ + + ++ G LP +VT
Sbjct: 729 NGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 102 ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
P+ TY S+I + C + ++A+ + + G P +Y +I CK+ M A
Sbjct: 284 SFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDA 343
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
+ + EM G PD Y L+ R++ EA LF++M+ G+ TY+ L++
Sbjct: 344 MRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDG 403
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
G F L ++ +KG +V + + S+V LC + + A++++ M
Sbjct: 404 LFRNGRAEAGFTLFCDLKKKG---QFVDAITFSIVGLQ-----LCREGKLEGAVKLVEEM 455
Query: 282 PEMLLDPDEVSYSAVISGFRR 302
D V+ S+++ GF +
Sbjct: 456 ETRGFSVDLVTISSLLIGFHK 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 20/228 (8%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 165
++T + ++ + E A+G+L M E G + Y ++ K E+ AL +
Sbjct: 126 DQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSIL 185
Query: 166 VEMLDKGIFPDVHAYGLLI------------QLLCHQRRLLEARDLFQEML--LRGMSP- 210
++L+ G +I +LL RR + R F+ + L+GM
Sbjct: 186 FKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRA-DMRSEFKRVFEKLKGMKRF 244
Query: 211 --GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 268
+Y+ + + G+ L E+ ++ + Y +SF P + TYN+LIH LC F
Sbjct: 245 KFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSV--YGSSFGPDICTYNSLIHVLCLF 302
Query: 269 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
+ +AL + + +PD +Y +I G + + A + EM
Sbjct: 303 GKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKG------IFPDVHAYGLLIQLLCHQRRLLEAR 197
SY+ I F ++ AL + EM ++ PD+ Y LI +LC + +A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
++ E+ + G P TY L++ C K + + D + G + Y F P +
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCC------KSYRMDDAMRIYGEMQY--NGFVPDTIV 361
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
YN L+ G ++ EA ++ M + + +Y+ +I G R F L ++
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 318 QK 319
+K
Sbjct: 422 KK 423
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 99/254 (38%), Gaps = 20/254 (7%)
Query: 54 EAVLEKMT-DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRS 112
E +L K + PD + +N LI A + Y LY Q+ P E TY
Sbjct: 165 EWILRKSSFQPDVICFNLLIDA-------YGQKFQYKEAESLYVQLLESRYVPTEDTYAL 217
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNK-EMGKALEMKVEM 168
+I+ +C +E A +L M +SP Y+ I K K +A+++ M
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
P Y L+I L + + L+ EM P TY LV A+ +G
Sbjct: 278 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 337
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
K + +++ + G P + YNAL+ P A EI M M +P
Sbjct: 338 EKAEEIFEQLQEDG--------LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 289 DEVSYSAVISGFRR 302
D SY+ ++ + R
Sbjct: 390 DRASYNIMVDAYGR 403
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 130/319 (40%), Gaps = 45/319 (14%)
Query: 33 GLVSFNAVVKRLCG-EGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIP 87
G+ +NA ++ L +G EA V ++M P TYN +I +A K++
Sbjct: 249 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMS--- 305
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+LY +M + PN TY +++ F E+A I + E GL P Y+
Sbjct: 306 ----WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA 361
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
++ + + A E+ M G PD +Y +++ +A +F+EM G
Sbjct: 362 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 421
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP--YYVTSF-------------- 251
++P +++ L+ AY + +K + E+ + G P + + S
Sbjct: 422 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 481
Query: 252 -----------SPSLVTYNALIH---GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
+ + TYN LI+ F +R +E L+ E PD V++++ I
Sbjct: 482 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK---EKNFRPDVVTWTSRI 538
Query: 298 SGFRRIRELRKAFELKLEM 316
+ R + K E+ EM
Sbjct: 539 GAYSRKKLYVKCLEVFEEM 557
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 110/270 (40%), Gaps = 19/270 (7%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
+ ++ A+V EG +AE + E++ + PD YN L+++ A PY
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA------GYPY- 373
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
E++ M P+ +Y M+ + +A + M G++P S+ ++
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
S + K +++ K + EM + G+ PD ++ L + + + EM +
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
TY+ L+ Y G ++ L E+ +K +F P +VT+ + I +
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEK--------NFRPDVVTWTSRIGAYSRKK 545
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISG 299
+ LE+ M + PD + ++S
Sbjct: 546 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA--DSYSRIISRFCKNKEMGK 160
LSP S I+ D ++V + +G L S HA D + + NK+
Sbjct: 107 LSPIAQKILSFIQKETDPDKVADVLGALP-------STHASWDDLINVSVQLRLNKKWDS 159
Query: 161 ALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
+ + +L K F PDV + LLI + + EA L+ ++L P TY L+
Sbjct: 160 IILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 219
Query: 220 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEIL 278
+AYC+ G + EV+ ++V+ + + YNA I GL + +EA+++
Sbjct: 220 KAYCMAGLIERA-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 274
Query: 279 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+ M P +Y+ +I+ + + + +++L EM + C P
Sbjct: 275 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKP 319
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 119/294 (40%), Gaps = 36/294 (12%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+ +VS+ A++K G + A+ + +++ D V++N +I E Y
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN-------YKE 249
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+EL+ M + P+E+T +++ +E + + + G + + +I
Sbjct: 250 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
+ K E LE + ++ + DV ++ LI H EA LFQEML G +P
Sbjct: 310 LYSKCGE----LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 211 GGRTYDTLVEAYCLKG--EFSKVFHLQDEVIQKGFL-----------------------P 245
T +++ A G + + H+ + KG
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 246 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
+ + SL ++NA+I G R D + ++ M ++ + PD++++ ++S
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 164
PN + +M R + A+ + M GL P++ ++ ++ K+K + ++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 165 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 224
+L G D++ + LI + RL +A +F + R + +Y L++ Y
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV----SYTALIKGYAS 212
Query: 225 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 284
+G L DE+ K +V++NA+I G EALE+ + M +
Sbjct: 213 RGYIENAQKLFDEIPVK------------DVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 285 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
+ PDE + V+S + + ++ L +D
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 26/274 (9%)
Query: 19 NVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKA 74
NV GF+ + T+ N +++ G + + +KM D +Y+ +
Sbjct: 178 NVIGNGFSVSNTK----IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDI 233
Query: 75 ACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
C++ K P+ + V+LY +M R + + Y ++IR VE + + R M
Sbjct: 234 MCKSGK------PW-KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMR 286
Query: 135 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 194
E+G P+ +++ II C++ M A M EM +G PD Y L L +L
Sbjct: 287 ERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEIL 346
Query: 195 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 254
LF M+ G+ P TY L+ + G V ++ + + G +P
Sbjct: 347 ---SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG--------DTPD 395
Query: 255 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
YNA+I L D A E M E L P
Sbjct: 396 SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 34 LVSFNAVVKRLCG----EGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+V++N V++ + E +R + E+ +P+ T+NT+IK CE + +
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDA----- 313
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL---MAEKGLSPHADSYS 146
+ +M R P+ TY C +R+E+ IL L M G+ P D+Y
Sbjct: 314 --YRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYV 365
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
++ +F + + L + M + G PD AY +I L + L AR+ +EM+ R
Sbjct: 366 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
Query: 207 GMSPGGR 213
G+SP R
Sbjct: 426 GLSPRRR 432
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGIL--RLMAEKGLSPHADSYSRIISR-FCKNKEMGKAL 162
+ET++ +++ C+ V EA + + + G S +I R + K GK
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 163 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 222
E +M +G+ D+ +Y + + ++C + +A L++EM R M Y+T++ A
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 223 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 282
+ E+ ++G P++ T+N +I LC R +A +L MP
Sbjct: 270 GASQGVEFGIRVFREMRERG--------CEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP 321
Query: 283 EMLLDPDEVSYSAVISGFRRIRELRKAF 310
+ PD ++Y + S + E+ F
Sbjct: 322 KRGCQPDSITYMCLFSRLEKPSEILSLF 349
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 17/230 (7%)
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
E + +M ++ + +Y + + C + +AV + + M + + +Y+ +I
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
++ + + + EM ++G P+V + +I+LLC R+ +A + EM RG P
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 213 RTYDTLVEAYCLKGEF---SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
TY CL S++ L +I+ G P + TY L+ +
Sbjct: 330 ITY------MCLFSRLEKPSEILSLFGRMIRSG--------VRPKMDTYVMLMRKFERWG 375
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
L + + M E PD +Y+AVI + L A E + EM ++
Sbjct: 376 FLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDPDCVT----YNTLIKAACEAEKNHNPSIPYVRI 91
S++ +++L +E + ++ ++ + YN++I +A K +R
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGK-------LIRA 226
Query: 92 VELYHQMCVR---ELSPNETTYRSMIRLFCDRNR--------VEEAVGILRLMAEKGLSP 140
V ++ M E P TY + + R +E + R M + G+ P
Sbjct: 227 VNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEP 286
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEM-LDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 199
+ + ++ + + + AL + +M + P+ Y LI LC Q R + AR+L
Sbjct: 287 DVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINAREL 346
Query: 200 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 259
EM +G P G++Y++LV A+ L GE E+I+ G V F ++Y
Sbjct: 347 LSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG----RVVDF----ISYR 398
Query: 260 ALIHGLCFFQRPDEALEILRGMPE-MLLDPDEVSYSAVIS 298
L+ C + DEA +L + E L+D D SY +++
Sbjct: 399 TLVDESCRKGKYDEATRLLEMLREKQLVDRD--SYDKLVN 436
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 99/254 (38%), Gaps = 20/254 (7%)
Query: 54 EAVLEKMT-DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRS 112
E +L K + PD + +N LI A + Y LY Q+ P E TY
Sbjct: 143 EWILRKSSFQPDVICFNLLIDA-------YGQKFQYKEAESLYVQLLESRYVPTEDTYAL 195
Query: 113 MIRLFCDRNRVEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNK-EMGKALEMKVEM 168
+I+ +C +E A +L M +SP Y+ I K K +A+++ M
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 228
P Y L+I L + + L+ EM P TY LV A+ +G
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 315
Query: 229 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 288
K + +++ + G P + YNAL+ P A EI M M +P
Sbjct: 316 EKAEEIFEQLQEDG--------LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 289 DEVSYSAVISGFRR 302
D SY+ ++ + R
Sbjct: 368 DRASYNIMVDAYGR 381
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 130/319 (40%), Gaps = 45/319 (14%)
Query: 33 GLVSFNAVVKRLCG-EGKLREAEAVLEKMT----DPDCVTYNTLIKAACEAEKNHNPSIP 87
G+ +NA ++ L +G EA V ++M P TYN +I +A K++
Sbjct: 227 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMS--- 283
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+LY +M + PN TY +++ F E+A I + E GL P Y+
Sbjct: 284 ----WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA 339
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
++ + + A E+ M G PD +Y +++ +A +F+EM G
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP--YYVTSF-------------- 251
++P +++ L+ AY + +K + E+ + G P + + S
Sbjct: 400 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 459
Query: 252 -----------SPSLVTYNALIH---GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
+ + TYN LI+ F +R +E L+ E PD V++++ I
Sbjct: 460 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK---EKNFRPDVVTWTSRI 516
Query: 298 SGFRRIRELRKAFELKLEM 316
+ R + K E+ EM
Sbjct: 517 GAYSRKKLYVKCLEVFEEM 535
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 103 LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHA--DSYSRIISRFCKNKEMGK 160
LSP S I+ D ++V + +G L S HA D + + NK+
Sbjct: 85 LSPIAQKILSFIQKETDPDKVADVLGALP-------STHASWDDLINVSVQLRLNKKWDS 137
Query: 161 ALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 219
+ + +L K F PDV + LLI + + EA L+ ++L P TY L+
Sbjct: 138 IILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 197
Query: 220 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEIL 278
+AYC+ G + EV+ ++V+ + + YNA I GL + +EA+++
Sbjct: 198 KAYCMAGLIERA-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 279 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
+ M P +Y+ +I+ + + + +++L EM + C P
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKP 297
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 49/251 (19%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGIL----RLMAEKGLSPHADSYSR 147
+++Y M + +++ + T+Y +++ C RV+ A I R+ + L A +Y
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
II F K AL++K +M G+ P+ H + LI + + +A LF+EML G
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHL--------------QDEVIQKGFL--------- 244
P + ++ L+ A ++ + F L D+++ KG
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN 499
Query: 245 ------------PYYVTS----FSPSLVTYNALIH--GLCFFQRPDEALEILRGMPEMLL 286
PY S F P+ TYN L+ G +++ E++ M + L
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYR----GKELMDEMKSLGL 555
Query: 287 DPDEVSYSAVI 297
P+++++S +I
Sbjct: 556 SPNQITWSTLI 566
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 63 PDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNR 122
P TYN L+KA C + Y R EL +M LSPN+ T+ ++I +
Sbjct: 524 PTTATYNILLKA-CGTD--------YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGD 574
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 182
VE AV ILR M G P +Y+ I +NK + A + EM I P+ Y
Sbjct: 575 VEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNT 634
Query: 183 LIQLLCHQRRLLEARD---LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
L++ LLE R ++Q+M G P L+E +C +G + QD++
Sbjct: 635 LLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQENGQSQDKI 692
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 25/270 (9%)
Query: 15 KTFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKM-----TDPDCVTYN 69
K F +P R ++ ++SFNA++ K E + ++ PD V+YN
Sbjct: 130 KVFEEMPNRD-----CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 70 TLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGI 129
TLIKA CE + S+P V L ++ + L P+ T+ +++ + + E I
Sbjct: 185 TLIKALCEKD-----SLP--EAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 130 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 189
M EK ++ +Y+ + + + + + E+ G+ PDV ++ +I+ +
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 190 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
+ ++ EA ++E++ G P T+ L+ A C G+F L E K +L
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL----- 352
Query: 250 SFSPSLVTYNALIHGLCFFQRPDEALEILR 279
T L+ L + +EA EI++
Sbjct: 353 ---VGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 28/298 (9%)
Query: 16 TFWNVPIRGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAA 75
TF PIR F++A T +VS V + + +++ +P + K A
Sbjct: 11 TFNTCPIRRFSSAAT---VVSEPTAVTAAISPPQ-KSLTSLVNGERNPKRIVEK--FKKA 64
Query: 76 CEAEKNHNPSIPY----VRIVELYHQMCVRELSPNETTYRSM---------IRLFCDRNR 122
CE+E+ Y R+V V E+ + YR M I L+
Sbjct: 65 CESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGM 124
Query: 123 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYG 181
E A + M + S++ ++S + +K+ E+ E+ K I PD+ +Y
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 241
LI+ LC + L EA L E+ +G+ P T++TL+ + LKG+F + ++++K
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK 244
Query: 242 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
+ + + TYNA + GL + E + + + L PD S++A+I G
Sbjct: 245 --------NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIP--Y 88
V++ +++ L G A+ + ++M PD +TYN L+ C+ K +
Sbjct: 17 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKV 76
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+L+ + ++ + PN TY +MI FC + EEA + R M E G P + +Y+ +
Sbjct: 77 EDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTL 136
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 204
I ++ + + E+ EM D YGL+ +L H RL + F EML
Sbjct: 137 IRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKG---FLEML 188
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+EL+ +M R L N TY ++I+ + A I + M G+ P +Y+ ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 152 FCKNKEMGKAL-EMKVE--------MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 202
CKN ++ KAL KVE + KG+ P+V Y +I C + EA LF++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 203 MLLRGMSPGGRTYDTLVEAYCLKGE 227
M G P TY+TL+ A+ G+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGD 145
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
+E+ EM +G+ + Y LIQ L A+++F+EM+ G+ P TY+ L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 222 YCLKGEFSKVFHLQDEVIQKG---FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 278
C G+ K L ++ G F + P++VTY +I G C +EA +
Sbjct: 61 LCKNGKLEKA--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 279 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
R M E PD +Y+ +I R + + EL EM
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 39/296 (13%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
E + S+N +VK + K+ A + +++ PD V+YNTLI +A + + + R
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 91 I----------------------VELYHQMCVRELSPNETTYRSM----IRLFCDRNRVE 124
+ V+L Q+ +S +Y S+ + + +
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 125 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 184
EAV + M E L S++ +I + ++KE KAL + EM+ KG D+ ++
Sbjct: 191 EAVSVFYGMDE--LRDEV-SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 185 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 244
L L+ R +++ G L++ Y G ++ ++V Q+
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD-SEKVFQE--- 303
Query: 245 PYYVTSFSPSLVTYNALIHGLCFFQR-PDEALEILRGMPEMLLDPDEVSYSAVISG 299
SP LV +N +I G + +EA++ R M + PD+ S+ V S
Sbjct: 304 -----ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 134/307 (43%), Gaps = 51/307 (16%)
Query: 18 WNVPIRGFTAAGT------------EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDC 65
WNV I + G VS+N ++ G+ A + ++M + D
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 66 VTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEE 125
V++N +IK +N N + EL+ M R++ ++ +M+ + V++
Sbjct: 127 VSWNVMIKGYV---RNRNLG----KARELFEIMPERDV----CSWNTMLSGYAQNGCVDD 175
Query: 126 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 185
A + M EK + S++ ++S + +N +M +A + + + ++ L+
Sbjct: 176 ARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLG 227
Query: 186 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
+++++EAR F M +R + +++T++ Y G+ + L DE
Sbjct: 228 GFVKKKKIVEARQFFDSMNVRDVV----SWNTIITGYAQSGKIDEARQLFDE-------- 275
Query: 246 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 305
S + T+ A++ G + +EA E+ MPE +EVS++A+++G+ +
Sbjct: 276 ----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGER 327
Query: 306 LRKAFEL 312
+ A EL
Sbjct: 328 MEMAKEL 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 46/308 (14%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
E+ LVS+N ++K L +A + E M + D ++NT++ + N + R
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ-----NGCVDDAR 177
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
V R N+ ++ +++ + +++EEA + + L S++ ++
Sbjct: 178 SV------FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLG 227
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
F K K++ +A + D DV ++ +I ++ EAR LF E ++ +
Sbjct: 228 GFVKKKKIVEAR----QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF- 282
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQD------EVIQKGFLPYYVTS-----------FSP 253
T+ +V Y + L D EV L YV P
Sbjct: 283 ---TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 254 --SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 311
++ T+N +I G + EA + MP+ D VS++A+I+G+ + +A
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEALR 395
Query: 312 LKLEMDQK 319
L ++M+++
Sbjct: 396 LFVQMERE 403
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 123/271 (45%), Gaps = 31/271 (11%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+E+ VS+N+++ L G+LR+A + ++M D +++NT++ +
Sbjct: 181 SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCRE-------MS 233
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD--SYSR 147
+ EL+ +M R N ++ +M+ + +E A R+M +K P + +++
Sbjct: 234 KAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMA----RVMFDKMPLPAKNVVTWTI 285
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR- 206
II+ + + + +A + +M+ G+ D A + I C + LL +L R
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV-ISILAACTESGLLSLGMRIHSILKRS 344
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+ + L++ Y G K F + +++ +K LV++N ++HGL
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK------------DLVSWNTMLHGLG 392
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
EA+E+ M + PD+V++ AV+
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 17/233 (7%)
Query: 23 RGFTAAGTEKGL-----VSFNAVVKRLCGEGKLREAEAVLEKM-----TDPDCVTYNTLI 72
R F + E G+ S VV LC G++ A ++E+M + VT+ ++I
Sbjct: 194 RDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI 253
Query: 73 KAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRL 132
C + ++++E M + +Y+ +I F +VEEA ++ +
Sbjct: 254 -GCCVKRWDFEELDLVLKLMEKESVML------DLDSYKVLIDGFTSYGKVEEAERLVLM 306
Query: 133 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 192
M +K L + Y+ I++ + + + K +E+ EM +G+ P+ Y +L+ LC +
Sbjct: 307 MHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Query: 193 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 245
+ EA E+ + Y TL E G K + E+I+ GF+P
Sbjct: 367 VCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 109 TYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
TY +M+ +F + R++ + LM EKG+ +Y+ +I + ++ A+ + EM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 169 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 227
D G P V +Y +++L R+ EA ++++EML +SP TY L+E G+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L +QM R + + ++I CDR R E A E G+ +Y +I F
Sbjct: 370 LLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFL 429
Query: 154 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
++ E+ K +E+ EM+ + +LI L RR A D+F LL G
Sbjct: 430 RSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFD--LLPDDQKGVA 487
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 265
Y L++ Y G K + E+ ++ + PSL TY+ L+ GL
Sbjct: 488 AYTALMDVYISAGSPEKAMKILREMREREIM--------PSLGTYDVLLSGL 531
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D TY T++ EA + + + ++H M + + + TY S+I V
Sbjct: 121 DHFTYTTMLDIFGEAGRIQS-------MYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
+ A+ + M + G P SY+ + + + +A E+ EML + P+ H Y +L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 184 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 229
++ L + EA D+F +M G+ P + L+ GE S
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETS 279
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 121 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 180
N+ A+ L M E G+ P Y+ +I + + E+ KA EM EM KG P+V Y
Sbjct: 703 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTY 762
Query: 181 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 240
+I+ LC EA L +EM RG +P Y TLV G+ S+ + E+++
Sbjct: 763 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Query: 241 KGFLPYYVT 249
KG + V+
Sbjct: 823 KGHYVHLVS 831
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 194 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 253
L A M G+ P Y TL++ Y + GE K + E+ KG LP
Sbjct: 706 LAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLP-------- 757
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 313
++ TYN++I GLC EA +L+ M +P+ V YS ++ R+ +L +A ++
Sbjct: 758 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVI 817
Query: 314 LEMDQK 319
EM +K
Sbjct: 818 KEMVKK 823
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 19 NVPIRGFTAAGTEKGLVSFNAVVKRLCGEG-KLREAEAVLEKM----TDPDCVTYNTLIK 73
NV + G G G ++ + G+G K A L M DP + Y TLI
Sbjct: 673 NVRVSGILVIGVLDGTQLLLIILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLID 732
Query: 74 A---ACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGIL 130
+ E +K E++ +M V+ PN TY SMIR C EA +L
Sbjct: 733 GYVVSGELDKAK----------EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLL 782
Query: 131 RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 172
+ M +G +P+ YS ++ K ++ +A ++ EM+ KG
Sbjct: 783 KEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 16/228 (7%)
Query: 64 DCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRV 123
D VT++TLI+ + S Y + +Y +M + PN Y +I R
Sbjct: 279 DAVTFSTLIRI-------YGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRP 331
Query: 124 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 183
+A I + + G +P+ +Y+ ++ + + + AL + EM +KG+ V Y L
Sbjct: 332 WQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL 391
Query: 184 IQLLCHQRRLLEARDLFQEML-LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
+ + R + EA ++FQ+M P T+ +L+ Y G S+ +
Sbjct: 392 LSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA--------EAA 443
Query: 243 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
L F P+L ++I ++ D+ + + E+ + PD+
Sbjct: 444 LLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 34 LVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYV 89
++ +N +K L ++E + ++M + PD T+ T+I +C A +N P
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII--SC-ARQNGVPK---- 227
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 149
R VE + +M P+ T +MI + V+ A+ + + A ++S +I
Sbjct: 228 RAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLI 287
Query: 150 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 209
+ + L + EM G+ P++ Y LI + +R +A+ ++++++ G
Sbjct: 288 RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG-- 345
Query: 210 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 269
F+P+ TY AL+ +
Sbjct: 346 -----------------------------------------FTPNWSTYAALVRAYGRAR 364
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 329
D+AL I R M E L + Y+ ++S R + +AFE+ +M ETC P D T
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDP-DSWT 423
Query: 330 NESLV 334
SL+
Sbjct: 424 FSSLI 428
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 25/278 (8%)
Query: 62 DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQM----CVRELSPNETTYRSM---- 113
DP +T K AC+AE Y R V V E+ + Y +M
Sbjct: 50 DPKFITEK--FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEG 107
Query: 114 -----IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 168
I L+ E A + M E+ A S++ +++ +K+ + E+
Sbjct: 108 FVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKEL 167
Query: 169 LDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 227
K I PDV +Y LI+ LC + EA L E+ +G+ P T++ L+ KG+
Sbjct: 168 PGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK 227
Query: 228 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 287
F + + +++K + + +YNA + GL + +E + + + L
Sbjct: 228 FEEGEQIWARMVEK--------NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELK 279
Query: 288 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 325
PD +++A+I GF +L +A E+ +K C PL
Sbjct: 280 PDVFTFTAMIKGFVSEGKLDEAITWYKEI-EKNGCRPL 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSI 86
E + S+N ++K LCG+G EA A+++++ + PD +T+N L+ + K
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 87 PYVRIVE----------------------------LYHQMCVRELSPNETTYRSMIRLFC 118
+ R+VE L+ ++ EL P+ T+ +MI+ F
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 119 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 178
+++EA+ + + + G P ++ ++ CK ++ A E+ E+ K + D
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 179 AYGLLIQLLCHQRRLLEARDLFQ 201
++ L + EA ++ +
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVE 376
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 48 GKLREAEAVLEKMTDPDC----VTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVREL 103
G A+ V ++M + +C +++N L+ A ++K +VE + +L
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKK--------FDLVEGIFKELPGKL 171
Query: 104 S--PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
S P+ +Y ++I+ C + EAV ++ + KGL P +++ ++ + +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
++ M++K + D+ +Y + L + + E LF ++ + P T+ +++
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 281
+ +G+ + E+ + G P +N+L+ +C + A E+ + +
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLK--------FVFNSLLPAICKAGDLESAYELCKEI 343
Query: 282 PEMLLDPDEVSYSAVISG 299
L DE V+
Sbjct: 344 FAKRLLVDEAVLQEVVDA 361
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/299 (17%), Positives = 118/299 (39%), Gaps = 46/299 (15%)
Query: 32 KGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIP---- 87
K + + V+RL K E +LE E+N P++
Sbjct: 69 KNIAVYERTVRRLAAAKKFEWVEEILE--------------------EQNKYPNMSKEGF 108
Query: 88 YVRIVELY-------------HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMA 134
RI+ LY +M R ++ +++ + + + GI + +
Sbjct: 109 VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELP 168
Query: 135 EK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 193
K + P SY+ +I C +A+ + E+ +KG+ PD + +L+ + +
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 194 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 253
E ++ M+ + + R+Y+ + ++ + ++ L D++ KG P
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL--KG------NELKP 280
Query: 254 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+ T+ A+I G + DEA+ + + + P + +++++ + +L A+EL
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
S+ +V LCG ++ A ++E M + V ++ + +A + + + + +
Sbjct: 394 TSYENLVSYLCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQ---ILEFNLVQRI 450
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
Y M + + PN T+R I L E A +L + L+P++ Y+ I++ + +
Sbjct: 451 YSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFR 510
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
K++ AL++ EM + + PD + LI + + + ++EM G+
Sbjct: 511 EKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEATIAK---YYKEMKQAGVEVNKHV 567
Query: 215 YDTLVEAYCLKGEFSKV 231
Y +LV+AY G+F K
Sbjct: 568 YMSLVKAYASCGQFEKA 584
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 128/291 (43%), Gaps = 24/291 (8%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSI 86
E+ ++++N+V+ C GK EA ++++M P VT+N LI +N
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG-------YNQLG 296
Query: 87 PYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 146
++L +M ++ + T+ +MI +A+ + R M G+ P+A +
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 147 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 206
+S K + + E+ + G DV L+ + +L +AR +F + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 207 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+ T+++++ YC G K + L F + P+++T+N +I G
Sbjct: 417 DV----YTWNSMITGYCQAGYCGKAYEL--------FTRMQDANLRPNIITWNTMISGYI 464
Query: 267 FFQRPDEALEILRGM-PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 316
EA+++ + M + + + +++ +I+G+ + + +A EL +M
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 123/284 (43%), Gaps = 21/284 (7%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQ 97
N+++ G+L A +M + D + +N+++ A C+ K+ VEL +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA-------VELVKE 272
Query: 98 MCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 157
M +SP T+ +I + + + A+ +++ M G++ +++ +IS N
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 158 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 217
+AL+M +M G+ P+ + + + + ++ + G ++
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 218 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 277
LV+ Y G+ + D V K + T+N++I G C +A E+
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNK------------DVYTWNSMITGYCQAGYCGKAYEL 440
Query: 278 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL--KLEMDQK 319
M + L P+ ++++ +ISG+ + + +A +L ++E D K
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYV-RIVELYH 96
N++V GKL +A V + + + D T+N++I C+A Y + EL+
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA--------GYCGKAYELFT 442
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG-LSPHADSYSRIISRFCKN 155
+M L PN T+ +MI + EA+ + + M + G + + +++ II+ + +N
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 156 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA---RDLFQEMLLRGMSPGG 212
+ +ALE+ +M P+ ++ LL LL A R++ +L R +
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVT---ILSLLPACANLLGAKMVREIHGCVLRRNLDAIH 559
Query: 213 RTYDTLVEAYCLKG--EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 270
+ L + Y G E+S+ L E + ++T+N+LI G
Sbjct: 560 AVKNALTDTYAKSGDIEYSRTIFLGME--------------TKDIITWNSLIGGYVLHGS 605
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVI 297
AL + M + P+ + S++I
Sbjct: 606 YGPALALFNQMKTQGITPNRGTLSSII 632
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 106 NETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS--RFCKNKEMGKALE 163
N T+ +MI + NR E + RLM + G+ P + +I+ C + E GK +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 164 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 223
V L V L + C + L A F+ M R + +++++ AYC
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGE--LDFATKFFRRMRERDVI----AWNSVLLAYC 258
Query: 224 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 283
G+ + L E+ ++G SP LVT+N LI G + D A+++++ M
Sbjct: 259 QNGKHEEAVELVKEMEKEG--------ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 284 MLLDPDEVSYSAVISGF 300
+ D +++A+ISG
Sbjct: 311 FGITADVFTWTAMISGL 327
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 14/284 (4%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYH 96
F V+ G++ EA V K+ + CV + A S+ V E+
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVP--EILV 168
Query: 97 QMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 156
+ C + E+T+ +I C V+ A ++R M++ + YSR++S CK+K
Sbjct: 169 KACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK 228
Query: 157 EMGKALEM--KVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
+ ++ +E L K F P + Y ++++ L R E + +M + P
Sbjct: 229 D-SSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 273
Y +++ ++ K L DE++ +P + TYN I+GLC +
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLL--------LGLAPDVYTYNVYINGLCKQNDIEG 339
Query: 274 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
AL+++ M ++ +P+ V+Y+ +I + +L +A L EM+
Sbjct: 340 ALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEME 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 33 GLVSFNAVVKRLCGEGKLREAEAVLEKM----TDPDCVTYNTLIKAACEAEKNHNPSIPY 88
GL + V++ L G+ +E +VL +M +PD V Y +++ E Y
Sbjct: 250 GLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED-------Y 302
Query: 89 VRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
+ +L+ ++ + L+P+ TY I C +N +E A+ ++ M + G P+ +Y+ +
Sbjct: 303 PKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNIL 362
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
I K ++ +A + EM G+ + H + ++I ++ A L +E +
Sbjct: 363 IKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNV 422
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHL 234
+ ++ C KG + L
Sbjct: 423 FVKSSRIEEVISRLCEKGLMDQAVEL 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 9/211 (4%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDPDCVT----YNTLIKAACEAEKNHNPSIPYVRI 91
+F ++ LC G++ A ++ M+ + Y+ L+ + C+ H S + +
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK----HKDSSCF-DV 235
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ + SP Y ++R + R +E V +L M + P Y+ ++
Sbjct: 236 IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQG 295
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+++ KA ++ E+L G+ PDV+ Y + I LC Q + A + M G P
Sbjct: 296 VIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
TY+ L++A G+ S+ L E+ G
Sbjct: 356 VVTYNILIKALVKAGDLSRAKTLWKEMETNG 386
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 25/245 (10%)
Query: 62 DPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRN 121
+P Y +IK ++ + N S LYH + E+ +R +I +
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSV------LYHLEVSEKFDTPESIFRDVIAAYGFSG 122
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK----GIFPDV 177
R+EEA+ + + P A + + ++ + ++ +LE+ E+L K G+ +
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ---SLELVPEILVKACRMGVRLEE 179
Query: 178 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE---FSKVFHL 234
+G+LI LC + A +L + M + R Y L+ + C + F + +L
Sbjct: 180 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL 239
Query: 235 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 294
+D ++K T FSP L Y ++ L R E + +L M ++PD V Y+
Sbjct: 240 ED--LRK-------TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 295 AVISG 299
V+ G
Sbjct: 291 IVLQG 295
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 25/252 (9%)
Query: 54 EAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNETTYRSM 113
+++L+K P+ V NTLI + +A K Y + L H+ P+E T+ ++
Sbjct: 308 QSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK-------PDEYTWNAL 360
Query: 114 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMG---KALEMKVEMLD 170
+ NR E+ + + ++ + L + C+ ++G KA+++ EM
Sbjct: 361 LTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQ--KLGYWEKAVKLLYEMEG 418
Query: 171 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 230
G+ +Y L+I R+ A +++ M R P TY +LV + C+ G
Sbjct: 419 SGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGS--- 474
Query: 231 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 290
L DEV + P + YNA IHG+C + A E+ M EM L+PD
Sbjct: 475 ---LWDEVED------ILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDG 525
Query: 291 VSYSAVISGFRR 302
+ + ++ ++
Sbjct: 526 KTRAMMLQNLKK 537
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 16/284 (5%)
Query: 38 NAVVKRLCGEGKLREAEAVLEKMTDPDCVT---YNTLIKAACEAEKNHNPSIPYVRIVEL 94
N+ + L G +++A V E M + VT Y+ ++KA E K ++ R +E
Sbjct: 146 NSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEV-KGCESALRMFRELER 204
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
+ R + Y + I L N V E I R+M G +YS ++S F +
Sbjct: 205 EPK---RRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVR 261
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
AL++ EM++ I A +I + + A +FQ ML +GM P
Sbjct: 262 CGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVA 321
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 274
+TL+ + G+ VF + + G P T+NAL+ L R ++
Sbjct: 322 CNTLINSLGKAGKVGLVFKVYSVLKSLG--------HKPDEYTWNALLTALYKANRYEDV 373
Query: 275 LEILRGM-PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 317
L++ + E L +E Y+ + +++ KA +L EM+
Sbjct: 374 LQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEME 417
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 25/286 (8%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTD---PDCVT-YNTLIKAACEAEKNHNPSIPYVRIV 92
+ V L G+ EA VLE+M D P+ Y+ LI+A EA + V I
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEARE--------VVIT 302
Query: 93 E-LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E L+ + ++L + ++ ++ +E + ++ M + L I++
Sbjct: 303 EKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
F K + +A+++ + + Y + I C + +A LF EM+ +G
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI--HGLCFFQ 269
Y +++ Y S L ++ Q+G P++ YN+LI HG
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGC--------KPNIWIYNSLIDMHGRAMDL 474
Query: 270 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 315
R E +I + M + PD+VSY+++IS + R +EL + EL E
Sbjct: 475 RRAE--KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 26/236 (11%)
Query: 88 YVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
+ V++Y E + TY I +C + +A + M +KG +YS
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
I+ + K + + A+ + +M +G P++ Y LI + L A +++EM
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV------IQKGFLPYYVTSFSPSLVTYNAL 261
+ P +Y +++ AY E + L E I + V FS +
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKT------- 541
Query: 262 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR------RIRELRKAFE 311
R DE + +L+ M D YS+ ++ R +IR L+++F+
Sbjct: 542 -------SRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFD 590
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
+M+D GI PDV A L++ R + R+L EM +G P G++Y++LV A+ L G
Sbjct: 238 QMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 292
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPE 283
E E+I+ G V F ++Y L+ C + DEA LE+LR
Sbjct: 293 EIDDAVKCLWEMIENG----RVVDF----ISYRTLVDESCRKGKYDEATRLLEMLREKQL 344
Query: 284 MLLDPDE 290
+ +D D+
Sbjct: 345 VDIDSDD 351
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 167 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 226
+M+D GI PDV A L++ R + R+L EM +G P G++Y++LV A+ L G
Sbjct: 213 QMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 267
Query: 227 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPE 283
E E+I+ G V F ++Y L+ C + DEA LE+LR
Sbjct: 268 EIDDAVKCLWEMIENG----RVVDF----ISYRTLVDESCRKGKYDEATRLLEMLREKQL 319
Query: 284 MLLDPDE 290
+ +D D+
Sbjct: 320 VDIDSDD 326
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 37 FNAVVKRLCGEGKLREAEAVLE--KMTDPDCVT---YNTLIKAACEAEKNHNPSIPYVRI 91
F AV++ L +L E V + K +P ++ Y +I+ CE EK+ + +I R
Sbjct: 98 FWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISENNYERIIRFLCE-EKSMSEAIRAFRS 156
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
+ H ELSP+ Y S+I + D + EEA+ L M E GL P ++Y +I
Sbjct: 157 MIDDH-----ELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEA 211
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ K K + + M G D Y LLI+ L ++Q ++ R M+
Sbjct: 212 YGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLE 271
Query: 212 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 242
T +++EAY G K+ +++I+ G
Sbjct: 272 PSTLLSMLEAYAEFGLIEKMEETCNKIIRFG 302
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 117/279 (41%), Gaps = 22/279 (7%)
Query: 48 GKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVELYHQMCVRELSPNE 107
G + +A+ V + + D + +NTL+ A E+ + + L++ M + + PN
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA-------LRLFYGMQLEGVPPNV 476
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
T+ +I +V+EA + M G+ P+ S++ +++ +N +A+ +
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK 536
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG--RTYDTLVEAYCLK 225
M + G+ P+ + + + H L R + ++R + +LV+ Y
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTI-HGYIIRNLQHSSLVSIETSLVDMYAKC 595
Query: 226 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 285
G+ +K + + + L NA+I + EA+ + R + +
Sbjct: 596 GDINKAEKV------------FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 286 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 324
L PD ++ + V+S ++ +A E+ ++ K + P
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKP 682
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 33/288 (11%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVRIVEL 94
VS+N+V+K GK+ A + KM + + +++ T+I +A+ N ++L
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEA-------LQL 234
Query: 95 YHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 154
+H+M ++ P+ + + + +E+ I + + + + +I + K
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 155 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 214
EM +ALE+ + K V A+ LI + EA F EM G+ P T
Sbjct: 295 CGEMEEALEVFKNIKKKS----VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 215 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT----SFSPSLVTYNALIHGLCFFQR 270
+ ++ A G ++++G L +Y + P++ Y ++ L
Sbjct: 351 FTAVLTACSYTG-----------LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGL 399
Query: 271 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 318
DEA ++ MP L P+ V + A++ R + K EL E+ +
Sbjct: 400 LDEAKRFIQEMP---LKPNAVIWGALLKACR----IHKNIELGEEIGE 440
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 130/331 (39%), Gaps = 45/331 (13%)
Query: 22 IRGFTAAGTEKGLVSFN-AVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEK 80
I G+ LV+ + A+V G L A + + M + + V++N++I A +
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ--- 314
Query: 81 NHNPSIPYVRIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSP 140
N NP + ++ +M + P + + + D +E I +L E GL
Sbjct: 315 NENPK----EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 141 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 200
+ + +IS +CK KE+ A M ++ + + ++ +I R ++A + F
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMILGFAQNGRPIDALNYF 426
Query: 201 QEMLLRGMSPGGRTYDTLVEAY-------------------CLKGEFSKVFHLQDEVIQK 241
+M R + P TY +++ A CL L D +
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 242 GFLPYYVTSFS----PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 297
G + F + T+NA+I G ALE+ M + + P+ V++ +VI
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 298 S----------GFRRIRELRKAFELKLEMDQ 318
S G + +++ + ++L MD
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDH 577
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 41/265 (15%)
Query: 29 GTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPY 88
G+ +V + +++ + G L EA + E M + + VT N ++ Y
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTG-------------Y 118
Query: 89 VRIVELYHQMCV-RELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 147
V+ + + RE+ N ++ M+ CD R E+AV + M E+ + S++
Sbjct: 119 VKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV----SWNT 174
Query: 148 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 207
+++ +N +M KA ++ M + DV ++ +I+ + EA+ LF +M +
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKN 230
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 267
+ T+ ++V YC G+ + + L E+ ++ ++V++ A+I G +
Sbjct: 231 VV----TWTSMVYGYCRYGDVREAYRLFCEMPER------------NIVSWTAMISGFAW 274
Query: 268 FQRPDEALEILRGMPEMLLDPDEVS 292
+ EAL + EM D D VS
Sbjct: 275 NELYREALMLFL---EMKKDVDAVS 296
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 117 FCDRNRVEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNKEMGKALEMKVEMLDKGI 173
FC + E ++ R + E P +S +R SRF E+ + VE+L+ GI
Sbjct: 69 FCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEV---FSLFVEILEDGI 125
Query: 174 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 233
PD + + L++ + L E R L + G+ TL+ Y +
Sbjct: 126 LPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC 185
Query: 234 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 293
+ D +++ P +V YNA+I G RP+EAL + R M L P+E++
Sbjct: 186 VFDRIVE------------PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITL 233
Query: 294 SAVISG 299
+V+S
Sbjct: 234 LSVLSS 239
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS-----RFCKN---- 155
PNE +Y ++I N+V EAV + RLM EKG+ + S I+S C +
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 156 --KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 213
E+GK ++ L G D+H L+++ + + A +F EM +
Sbjct: 263 YGNELGK--QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV---- 316
Query: 214 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS--------------------- 252
+++ ++ + + K + GF P VT S
Sbjct: 317 SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Query: 253 --PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 306
PS+ +NA++ G ++ +EA+ R M L PD+ + S ++S R+R L
Sbjct: 377 PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 9/207 (4%)
Query: 30 TEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYV 89
+K VS+N+++ G EA V ++ VT+N + + +H+ ++
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL--- 303
Query: 90 RIVELYHQMCVR-ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 148
RI + H +R L + S+I ++C RVE A M K + S++ +
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR----SWTAM 359
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR-G 207
I+ + + KALE+ M+D G+ P+ + ++ H +E F M R G
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 208 MSPGGRTYDTLVEAYCLKGEFSKVFHL 234
+ PG Y +V+ G K + L
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDL 446
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 122/292 (41%), Gaps = 29/292 (9%)
Query: 23 RGFTAAGTEKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLI----KAACEA 78
R F A +K + S+N +V G + A+AV ++M D V++N+L+ K C+
Sbjct: 290 RAFDAM-KKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 79 EKNHNPSIPYVRIVELYHQMCVRE-LSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKG 137
+ EL+++M + E + P+ T S+I + + + L+
Sbjct: 349 RT----------VRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQ 398
Query: 138 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 197
L A S +I +CK + +A + +K DV + +I L +A
Sbjct: 399 LKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK----DVALWTSMITGLAFHGNGQQAL 454
Query: 198 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 257
LF M G++P T ++ A G + H+ + + K F P
Sbjct: 455 QLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK-------FGFDPETEH 507
Query: 258 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 309
Y +L+ LC R +EA +I++ +M + P + + +++S R ++ A
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQ--KKMPMRPSQSMWGSILSACRGGEDIETA 557
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 33/238 (13%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD-----PDCVTYNTLIKAACEAEKNH------- 82
V++N ++ G E E+VL M + PD T N++I +
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYS 310
Query: 83 -------NPSIPYVRIVEL-------YHQMCV-------RELSPNETTYRSMIRLFCDRN 121
P I I+ L Y +MC R S TY +I F
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
Query: 122 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 181
R+E+ + R M +G+ P++ +Y +++ + K + K + ++++ + D +
Sbjct: 371 RIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFN 430
Query: 182 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 239
+I L ++L+ +M R P T+ T+++ Y G F V L+ ++I
Sbjct: 431 CIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 94 LYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 153
L + V + P+ T+ +I C R + I+ M+ G+ +Y+ II +
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 154 KNKEMGKALEMKVEMLDKG-IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 212
K + + +M++ G PDV +I + R + + + L G+ P
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDI 321
Query: 213 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 272
T++ L+ ++ G + K+ + D ++K F FS + VTYN +I R +
Sbjct: 322 TTFNILILSFGKAGMYKKMCSVMD-FMEKRF-------FSLTTVTYNIVIETFGKAGRIE 373
Query: 273 EALEILRGMPEMLLDPDEVSYSAVISGFRR 302
+ ++ R M + P+ ++Y ++++ + +
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 105 PNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA--- 161
P TY + ++ + + ++A + +M +GL P D Y+ +IS + K++ + KA
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 221
LE + D PDV + +LI C R + + EM G+ TY+T+++
Sbjct: 202 LEYMKSVSD--CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDG 259
Query: 222 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 262
Y G F ++ + ++I+ G P + T N++I
Sbjct: 260 YGKAGMFEEMESVLADMIEDG-------DSLPDVCTLNSII 293
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 121/296 (40%), Gaps = 42/296 (14%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTD------PDCVTYNTLIKAACEAEKNHNP 84
EK +V++ +++ LC GK +EA V M D PD ++ A E
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA---- 491
Query: 85 SIPYVRI-VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
+R ++++ M L N S+I L+ E A+ + M+ + +
Sbjct: 492 ----LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV---- 543
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
+++ +IS + +N ++++ ML +GIFPD + ++ + LL+ + L
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS----PSLVTYN 259
L G+ + L++ Y ++ GF Y F SL+T+N
Sbjct: 604 LRLGIPSDTHLKNALIDMY----------------VKCGFSKYAENIFKKMQHKSLITWN 647
Query: 260 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR---IRELRKAFEL 312
+I+G AL + M + PD+V++ ++IS + E + FE
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 108 TTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 167
+ +MI + + ++ +EA+ +++ M G+ P +++ +IS F + K E+
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 168 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE-----AY 222
M G PDV ++ +I L H + +A D F++ML G+ P T TL+ AY
Sbjct: 244 MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 223 CLKGE----FSKVFHLQDEVIQK----------GFLPYYVTSF----SPSLVTYNALIHG 264
G+ +S V L+D + GF+ + F + VT+N++I
Sbjct: 304 MKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFC 363
Query: 265 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 299
D+A+E+ M D ++++A+++
Sbjct: 364 YANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 33/221 (14%)
Query: 115 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 174
RLFC R RV A + G++ +++++ + E GK L+ + ++ D+
Sbjct: 30 RLFC-RGRVLHA-----HLVTSGIARLTRIAAKLVTFYV---ECGKVLDAR-KVFDEMPK 79
Query: 175 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY--CLKGEFSKVF 232
D+ ++I E+ D F+EM G+ +L++A L EF K+
Sbjct: 80 RDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMI 139
Query: 233 HL--------QDEVIQKGFLPYYVT---------SFS----PSLVTYNALIHGLCFFQRP 271
H D I + Y FS LV +NA+I G +
Sbjct: 140 HCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQA 199
Query: 272 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
DEAL +++ M + + PD ++++A+ISGF +R K E+
Sbjct: 200 DEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/356 (18%), Positives = 132/356 (37%), Gaps = 58/356 (16%)
Query: 5 LRVSSTVATLKTFWNVPIRGFTAAGT------------EKGLVSFNAVVKRLCGEGKLRE 52
+R S V + WN +R + G+ + L S+N +V G L E
Sbjct: 111 IRTSGFVPGI-VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEE 169
Query: 53 AEAVLEKMTDPDCVTYNTLIKAACEAEK---------------NHNPSIPYVRIV----- 92
A + ++MT+ D ++ ++ + ++ N P+I V I
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAA 229
Query: 93 ---------ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 143
E++ + L +E + S++ ++ ++EA I + EK +
Sbjct: 230 AVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV---- 285
Query: 144 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 203
S++ +I R+ K+ + + E++ P+ + + ++ + + M
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 204 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 263
G P +LV+ Y G H+ D + P LV++ +LI
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK------------PDLVSWTSLIG 393
Query: 264 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 319
G +PDEAL+ + + PD V++ V+S + K E + +K
Sbjct: 394 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEK 449
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 96 HQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 155
++M R+ N Y +IR++ D ++A+GI+ + E GL + Y+ +I F K
Sbjct: 74 NEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKY 133
Query: 156 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTY 215
E+ + L+ G F D+ G L+ L Q G++P +
Sbjct: 134 GELDEELQF-------GSFEDI---GELVGKLKSQ----------------GVAPSANLF 167
Query: 216 DTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEAL 275
TL AY +G + + + +G P+L+ N LI+ + EAL
Sbjct: 168 CTLANAYAQQGLCKQTVKVLKMMENEG--------IEPNLIMLNVLINAFGTAGKHMEAL 219
Query: 276 EILRGMPE-MLLDPDEVSYSAVISGFRRIRE 305
I + E + + PD V+YS ++ F R ++
Sbjct: 220 SIYHHIKETVWIHPDVVTYSTLMKAFTRAKK 250
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 15/219 (6%)
Query: 31 EKGLVSFNAVVKRLCGEGKLREAEAVLEKMTDPDCVTYNTLIKAACEAEKNHNPSIPYVR 90
K VS+N+++ L ++ EA + EKM D V++ +IK + +
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKG-------FSGKGEISK 390
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
VEL+ M ++ T+ +MI F EEA+ M +K + P++ ++S ++S
Sbjct: 391 CVELFGMMPEKD----NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
++ + L++ ++ I D+ L+ + C +A +F + P
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI----SEP 502
Query: 211 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 249
+Y+T++ Y G K L + G P VT
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 102 ELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 161
E S E TY S++ +C E+A G+L M E ++P + SY+ +++ + K E K
Sbjct: 118 ETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKV 177
Query: 162 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVE 220
M E+ + + PD + Y + ++ L + + +EM G ++P TY +
Sbjct: 178 PAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMAS 237
Query: 221 AYCLKG 226
Y G
Sbjct: 238 IYVDAG 243
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Query: 37 FNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRIV 92
F+ ++ L + ++ EA V+E M D +YN + + C S R++
Sbjct: 163 FHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEAS----RVL 218
Query: 93 ELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 152
+ +SP+ TY +++ C RVE A+ ILR M E+GLS +++ +I
Sbjct: 219 RKMEEEEEGVMSPDTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVIGEM 278
Query: 153 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
++ ++E + K D G L L ++R EA+ + +EM +RG+ G
Sbjct: 279 VESGYYALSVEFVMAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRGLRMG 337
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 90 RIVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRI 148
+++ + +M E P+ TY S++ + V E +G+L M E +S + +Y+ +
Sbjct: 195 KVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTV 254
Query: 149 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 208
++ K L + EM+ GI PD+ +Y +I L + E+ LF EM R +
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Query: 209 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 238
P Y L++ G+F L DE+
Sbjct: 315 RPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 118/286 (41%), Gaps = 35/286 (12%)
Query: 35 VSFNAVVKRLCGEGKLREAEAVLEKMTD----PDCVTYNTLIKAACEAEKNHNPSIPYVR 90
+S+ ++ L G K REA +M P+ T+ L+ A+ +I
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTI---- 246
Query: 91 IVELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 150
+ + VR + N S++ + +++E+AV +L E+ + ++ ++S
Sbjct: 247 ----HSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFL----WTSVVS 298
Query: 151 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 210
F +N +A+ +EM G+ P+ Y ++ L R L + + + + G
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 211 GGRTYDTLVEAY--CLKGEF--SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 266
+ LV+ Y C E S+VF SP++V++ LI GL
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAM---------------VSPNVVSWTTLILGLV 403
Query: 267 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 312
+ +L M + ++P+ V+ S V+ ++R +R+ E+
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 36 SFNAVVKRLCGEGKLREAEAVLEKMTDP----DCVTYNTLIKAACEAEKNHNPSIPYVRI 91
+++ ++ L + K+ EA V+E M D YN + + C + + S +I
Sbjct: 144 TYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKI 203
Query: 92 VELYHQMCVRELSPNETTYRSMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 151
E + SP+ +Y +++ C +VE A+ ILR M E G++ +++ +I+
Sbjct: 204 EEDGN-------SPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITG 256
Query: 152 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 211
+ LE + K + D ++G L L ++R EA + +EM++RG+ G
Sbjct: 257 LVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMG 316