Miyakogusa Predicted Gene
- Lj0g3v0140239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0140239.1 tr|G7IL56|G7IL56_MEDTR Auxin response factor
OS=Medicago truncatula GN=MTR_2g005240 PE=4 SV=1,91.38,0,FAMILY NOT
NAMED,NULL; no description,DNA-binding pseudobarrel domain;
DNA-binding pseudobarrel doma,CUFF.8547.1
(614 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 869 0.0
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 868 0.0
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 865 0.0
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 865 0.0
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 547 e-155
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 540 e-153
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 539 e-153
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 537 e-153
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 534 e-152
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 495 e-140
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 495 e-140
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 495 e-140
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 494 e-140
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 478 e-135
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 421 e-117
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 416 e-116
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 414 e-116
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 411 e-115
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 387 e-108
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 375 e-104
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 328 1e-89
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 327 1e-89
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 323 2e-88
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 323 2e-88
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 320 1e-87
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 313 2e-85
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 308 5e-84
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 298 7e-81
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 296 4e-80
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 295 7e-80
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 293 2e-79
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 293 2e-79
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 280 3e-75
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 279 4e-75
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 235 6e-62
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 215 9e-56
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 181 2e-45
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 171 2e-42
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 68 2e-11
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 67 3e-11
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 65 2e-10
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 64 2e-10
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 64 5e-10
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 6e-09
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 6e-09
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 60 6e-09
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 59 1e-08
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 59 1e-08
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 58 2e-08
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 57 4e-08
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 55 2e-07
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 53 6e-07
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 53 6e-07
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 52 2e-06
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 51 3e-06
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 50 4e-06
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/617 (71%), Positives = 490/617 (79%), Gaps = 17/617 (2%)
Query: 1 MNQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE 60
M+QGLE QMPSFNLP KILCKV+NI RAEPETDEVYAQITLLPE DQSE SPD P+ E
Sbjct: 56 MHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE 115
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P +CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDM+QQPPWQELVATDLH +EWH
Sbjct: 116 PEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWH 175
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGEN ELRVGVRR MRQQ+N+PSS
Sbjct: 176 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSS 235
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMH+GVLATA+HAI TGT+FSVFYKPRTSRSEFIVSVN+YLEA+ KLSVGMRFK
Sbjct: 236 VISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFK 295
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RFSGTIVGV+ N SSVW DSEWRSLKVQWDEPSS+ RP+RVSPWELEPL
Sbjct: 296 MRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPL 355
Query: 301 V--STPPANSQPTPRNKRSRPPVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLYASP 358
V STP + QP RNKR RPP LPS S GVWKSP D+P L++ P
Sbjct: 356 VANSTPSSQPQPPQRNKRPRPPGLPSPATGPSDGVWKSPADTP--------SSVPLFSPP 407
Query: 359 KFNSTATSFFCFGGNNS--ASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGNGCRLF 416
+T F GGN S S S +W T +++ E+F+ ES EK+Q GN CRLF
Sbjct: 408 AKAAT----FGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLF 463
Query: 417 GIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKS 476
G +L+EN N +E ++SG + DQ +PS + +S Q SEP N+N+SDIPS S D EKS
Sbjct: 464 GFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKS 523
Query: 477 CLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAK 536
LRSPQESQSRQIRSCTKVHMQG AVGRA+DLT+ + YEDL +KLEEMFDIKGEL S K
Sbjct: 524 SLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK 583
Query: 537 KWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPMNDEGKPSKLD 596
KWQVVYTD+EDDMMMVGDDPW EFC +VRKIFIYT EEVKKLSPK L +N + K D
Sbjct: 584 KWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQ-LKAD 642
Query: 597 SEAVVNPEDQSSVVGPS 613
+E N E +SS + S
Sbjct: 643 AEENGNTEGRSSSMAGS 659
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/619 (71%), Positives = 491/619 (79%), Gaps = 19/619 (3%)
Query: 1 MNQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE 60
M+QGLE QMPSFNLP KILCKV+NI RAEPETDEVYAQITLLPE DQSE SPD P+ E
Sbjct: 56 MHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE 115
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P +CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDM+QQPPWQELVATDLH +EWH
Sbjct: 116 PEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWH 175
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGEN ELRVGVRR MRQQ+N+PSS
Sbjct: 176 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSS 235
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMH+GVLATA+HAI TGT+FSVFYKPRTSRSEFIVSVN+YLEA+ KLSVGMRFK
Sbjct: 236 VISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFK 295
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RFSGTIVGV+ N SSVW DSEWRSLKVQWDEPSS+ RP+RVSPWELEPL
Sbjct: 296 MRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPL 355
Query: 301 V--STPPANSQPTPRNKRSRPPVLPS--TIPDSSQGVWKSPVDSPPFSYRDPQHGRDLYA 356
V STP + QP RNKR RPP LPS T P GVWKSP D+P L++
Sbjct: 356 VANSTPSSQPQPPQRNKRPRPPGLPSPATGPSGPDGVWKSPADTP--------SSVPLFS 407
Query: 357 SPKFNSTATSFFCFGGNNS--ASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGNGCR 414
P +T F GGN S S S +W T +++ E+F+ ES EK+Q GN CR
Sbjct: 408 PPAKAAT----FGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCR 463
Query: 415 LFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAE 474
LFG +L+EN N +E ++SG + DQ +PS + +S Q SEP N+N+SDIPS S D E
Sbjct: 464 LFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPE 523
Query: 475 KSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGS 534
KS LRSPQESQSRQIRSCTKVHMQG AVGRA+DLT+ + YEDL +KLEEMFDIKGEL S
Sbjct: 524 KSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLES 583
Query: 535 AKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPMNDEGKPSK 594
KKWQVVYTD+EDDMMMVGDDPW EFC +VRKIFIYT EEVKKLSPK L +N + K
Sbjct: 584 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQ-LK 642
Query: 595 LDSEAVVNPEDQSSVVGPS 613
D+E N E +SS + S
Sbjct: 643 ADAEENGNTEGRSSSMAGS 661
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/622 (70%), Positives = 492/622 (79%), Gaps = 22/622 (3%)
Query: 1 MNQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE 60
M+QGLE QMPSFNLP KILCKV+NI RAEPETDEVYAQITLLPE DQSE SPD P+ E
Sbjct: 56 MHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE 115
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P +CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDM+QQPPWQELVATDLH +EWH
Sbjct: 116 PEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWH 175
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGEN ELRVGVRR MRQQ+N+PSS
Sbjct: 176 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSS 235
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMH+GVLATA+HAI TGT+FSVFYKPRTSRSEFIVSVN+YLEA+ KLSVGMRFK
Sbjct: 236 VISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFK 295
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RFSGTIVGV+ N SSVW DSEWRSLKVQWDEPSS+ RP+RVSPWELEPL
Sbjct: 296 MRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPL 355
Query: 301 V--STPPANSQPTPRNKRSRPPVLPS-----TIPDSSQGVWKSPVDSPPFSYRDPQHGRD 353
V STP + QP RNKR RPP LPS + P + GVWKSP D+P
Sbjct: 356 VANSTPSSQPQPPQRNKRPRPPGLPSPATGPSGPVTPDGVWKSPADTP--------SSVP 407
Query: 354 LYASPKFNSTATSFFCFGGNNS--ASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGN 411
L++ P +T F GGN S S S +W T +++ E+F+ ES EK+Q GN
Sbjct: 408 LFSPPAKAAT----FGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGN 463
Query: 412 GCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSC 471
CRLFG +L+EN N +E ++SG + DQ +PS + +S Q SEP N+N+SDIPS S
Sbjct: 464 VCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSG 523
Query: 472 DAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGEL 531
D EKS LRSPQESQSRQIRSCTKVHMQG AVGRA+DLT+ + YEDL +KLEEMFDIKGEL
Sbjct: 524 DPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGEL 583
Query: 532 CGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPMNDEGK 591
S KKWQVVYTD+EDDMMMVGDDPW EFC +VRKIFIYT EEVKKLSPK L +N +
Sbjct: 584 LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQ 643
Query: 592 PSKLDSEAVVNPEDQSSVVGPS 613
K D+E N E +SS + S
Sbjct: 644 -LKADAEENGNTEGRSSSMAGS 664
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/622 (70%), Positives = 492/622 (79%), Gaps = 22/622 (3%)
Query: 1 MNQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE 60
M+QGLE QMPSFNLP KILCKV+NI RAEPETDEVYAQITLLPE DQSE SPD P+ E
Sbjct: 56 MHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE 115
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P +CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDM+QQPPWQELVATDLH +EWH
Sbjct: 116 PEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWH 175
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGEN ELRVGVRR MRQQ+N+PSS
Sbjct: 176 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSS 235
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMH+GVLATA+HAI TGT+FSVFYKPRTSRSEFIVSVN+YLEA+ KLSVGMRFK
Sbjct: 236 VISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFK 295
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RFSGTIVGV+ N SSVW DSEWRSLKVQWDEPSS+ RP+RVSPWELEPL
Sbjct: 296 MRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPL 355
Query: 301 V--STPPANSQPTPRNKRSRPPVLPS-----TIPDSSQGVWKSPVDSPPFSYRDPQHGRD 353
V STP + QP RNKR RPP LPS + P + GVWKSP D+P
Sbjct: 356 VANSTPSSQPQPPQRNKRPRPPGLPSPATGPSGPVTPDGVWKSPADTP--------SSVP 407
Query: 354 LYASPKFNSTATSFFCFGGNNS--ASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGN 411
L++ P +T F GGN S S S +W T +++ E+F+ ES EK+Q GN
Sbjct: 408 LFSPPAKAAT----FGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGN 463
Query: 412 GCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSC 471
CRLFG +L+EN N +E ++SG + DQ +PS + +S Q SEP N+N+SDIPS S
Sbjct: 464 VCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSG 523
Query: 472 DAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGEL 531
D EKS LRSPQESQSRQIRSCTKVHMQG AVGRA+DLT+ + YEDL +KLEEMFDIKGEL
Sbjct: 524 DPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGEL 583
Query: 532 CGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPMNDEGK 591
S KKWQVVYTD+EDDMMMVGDDPW EFC +VRKIFIYT EEVKKLSPK L +N +
Sbjct: 584 LESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQ 643
Query: 592 PSKLDSEAVVNPEDQSSVVGPS 613
K D+E N E +SS + S
Sbjct: 644 -LKADAEENGNTEGRSSSMAGS 664
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 547 bits (1409), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/587 (52%), Positives = 379/587 (64%), Gaps = 68/587 (11%)
Query: 2 NQGLE-HQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE 60
NQG+ ++P F+LP KILC+V+++ L+AE ETDEVYAQITL PE DQSE S D P+
Sbjct: 60 NQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG 119
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
PT+ HSF K LTASDTSTHGGFSVLR+HA +CLP LDMTQ P QELV DLHG EW
Sbjct: 120 PTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWR 179
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
F+HIFRGQPRRHLLTTGWS FVSSK+LVAGDAF+FLRGENG+LRVGVRRL R QS MP+S
Sbjct: 180 FKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTS 239
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISS SMHLGVLATASHA+ T T+F VFYKPR S+FIV VNKY+EA H S+G RF+
Sbjct: 240 VISSQSMHLGVLATASHAVRTTTIFVVFYKPRI--SQFIVGVNKYMEAIKHGFSLGTRFR 297
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PER F+GTIVG + SS W S+WRSL+VQWDEP+++ RPD+VSPWE+EP
Sbjct: 298 MRFEGEESPERIFTGTIVG-SGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPF 356
Query: 301 VSTPPANS---QPTPRNKRSRPPVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLYAS 357
++T P ++ QP + KRSR P+ PS K+P P F Y PQ + AS
Sbjct: 357 LATSPISTPAQQPQSKCKRSR-PIEPSV---------KTPA-PPSFLYSLPQSQDSINAS 405
Query: 358 PKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGNGCRLFG 417
K + GG +S+ ET P T RLFG
Sbjct: 406 LKLFQDPSLERISGG----------YSSNNSFKPETPPP-----------PTNCSYRLFG 444
Query: 418 IQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSC 477
L NS A IP Q +P + + C +
Sbjct: 445 FDLTSNSPA-----------------PIP-------QDKQPMDT----CGAAKCQEPITP 476
Query: 478 LRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKK 537
++ + + RS TKV MQG+AVGRAVDLT Y++L+ +LEEMF+I+G+L + K
Sbjct: 477 TSMSEQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL-ARDK 535
Query: 538 WQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGL 584
W VV+TD+E DMM+ GDDPW EFC + +KIFIY+++EVKK++ K+ +
Sbjct: 536 WIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 582
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/603 (51%), Positives = 387/603 (64%), Gaps = 69/603 (11%)
Query: 2 NQGL-EHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE 60
NQG+ + ++P FNLP KILC+V+++ L+AE ETDEVYAQITL PE DQSE S D PL E
Sbjct: 56 NQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE 115
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P + TV SF K LTASDTSTHGGFSVLR+HA +CLP LDMTQ P QELVA DLHG EW
Sbjct: 116 PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 175
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
F+HIFRGQPRRHLLTTGWS FV+SK+LVAGDAF+FLRGE G+LRVGVRRL +QQS MP+S
Sbjct: 176 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 235
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISS SM LGVLATASHA+ T T+F VFYKPR S+FI+SVNKY+ A + S+GMR++
Sbjct: 236 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYR 293
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PER F+GTI+G + SS W S+WRSL++QWDEPSSI RP++VSPWE+EP
Sbjct: 294 MRFEGEESPERIFTGTIIG-SGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF 352
Query: 301 VSTPPANSQPTP-----RNKRSRPPVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLY 355
P+ PTP ++KRSRP + SPV S S H +
Sbjct: 353 ---SPSALTPTPTQQQSKSKRSRP----------ISEITGSPVASSFLSSFSQSHESNPS 399
Query: 356 ASPKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGNGCRL 415
F AT SNKS + S TE +P+ + CRL
Sbjct: 400 VKLLFQDPAT--------ERNSNKSVFSSGLQCKITE--APVT------------SSCRL 437
Query: 416 FGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEK 475
FG L + A ++P D+ + S+D SN++ S + C
Sbjct: 438 FGFD-LTSKPASATIP---------HDKQLISVD---------SNISDS---TTKCQDPN 475
Query: 476 SCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSA 535
S ++ Q RS KV MQG AVGRAVDLT Y++L+++LE+MF+I+GEL
Sbjct: 476 SSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPK 534
Query: 536 KKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPMNDEGKPSKL 595
KW +V+TD+E D M+VGDDPW EFC + +K+FIY ++EVKK+ K L D+G L
Sbjct: 535 DKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL--GDKGTIVNL 592
Query: 596 DSE 598
+S+
Sbjct: 593 ESD 595
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 539 bits (1389), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/603 (51%), Positives = 387/603 (64%), Gaps = 69/603 (11%)
Query: 2 NQGL-EHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE 60
NQG+ + ++P FNLP KILC+V+++ L+AE ETDEVYAQITL PE DQSE S D PL E
Sbjct: 77 NQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE 136
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P + TV SF K LTASDTSTHGGFSVLR+HA +CLP LDMTQ P QELVA DLHG EW
Sbjct: 137 PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 196
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
F+HIFRGQPRRHLLTTGWS FV+SK+LVAGDAF+FLRGE G+LRVGVRRL +QQS MP+S
Sbjct: 197 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 256
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISS SM LGVLATASHA+ T T+F VFYKPR S+FI+SVNKY+ A + S+GMR++
Sbjct: 257 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYR 314
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PER F+GTI+G + SS W S+WRSL++QWDEPSSI RP++VSPWE+EP
Sbjct: 315 MRFEGEESPERIFTGTIIG-SGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF 373
Query: 301 VSTPPANSQPTP-----RNKRSRPPVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLY 355
P+ PTP ++KRSRP + SPV S S H +
Sbjct: 374 ---SPSALTPTPTQQQSKSKRSRP----------ISEITGSPVASSFLSSFSQSHESNPS 420
Query: 356 ASPKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGNGCRL 415
F AT SNKS + S TE +P+ + CRL
Sbjct: 421 VKLLFQDPAT--------ERNSNKSVFSSGLQCKITE--APVT------------SSCRL 458
Query: 416 FGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEK 475
FG L + A ++P D+ + S+D SN++ S + C
Sbjct: 459 FGFD-LTSKPASATIP---------HDKQLISVD---------SNISDS---TTKCQDPN 496
Query: 476 SCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSA 535
S ++ Q RS KV MQG AVGRAVDLT Y++L+++LE+MF+I+GEL
Sbjct: 497 SSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPK 555
Query: 536 KKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPMNDEGKPSKL 595
KW +V+TD+E D M+VGDDPW EFC + +K+FIY ++EVKK+ K L D+G L
Sbjct: 556 DKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL--GDKGTIVNL 613
Query: 596 DSE 598
+S+
Sbjct: 614 ESD 616
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 537 bits (1384), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/590 (51%), Positives = 392/590 (66%), Gaps = 32/590 (5%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLP-ETDQSEVASPDEPLPEPTR 63
L P F LP KILC V+N+ L+AE +TDEVYAQITL+P T+ E SPD PE R
Sbjct: 51 LNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQR 110
Query: 64 CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRH 123
VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDMTQQ P QELVA D+HG +W F+H
Sbjct: 111 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKH 170
Query: 124 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVIS 183
IFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGELRVGVRR QQS+MPSSVIS
Sbjct: 171 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVIS 230
Query: 184 SHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRF 243
SHSMHLGVLATA HA T T+F V+YKPRT S+FI+S+NKYLEA ++K SVGMRFKMRF
Sbjct: 231 SHSMHLGVLATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRF 288
Query: 244 EGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVST 303
EGE+ PERR+SGT++GV+ + S W DS+WR L+V WDEP+SI RP++VSPWE+EP V++
Sbjct: 289 EGEDSPERRYSGTVIGVK-DCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNS 347
Query: 304 PPANSQPTPRNKRSRPPVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLYASPKFNST 363
+NKR R S + ++ +W S + P + S +
Sbjct: 348 ENVPKSVMLKNKRPRQVSEVSALGITASNLWSSVLTQP----------HEFAQSCITSQW 397
Query: 364 ATSFFCFGGNNSASNKSTY----WSTRMENSTETFSPIALKESGEKRQGTGNGCRLFGIQ 419
++ C N + KS + +S T + + +K+ T RLFGI
Sbjct: 398 SSPQQCHRDANEDAKKSDWLNNSYSVSNVAKDSTLNDQMVSPVEQKKPETTANYRLFGID 457
Query: 420 LLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSCLR 479
L+ +S A +P + + S P++D+ SD SE S V+ ++
Sbjct: 458 LMSSSLA---VPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEE-------KKQEPAEG 507
Query: 480 SPQESQSRQ---IRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAK 536
SP+E QS+Q RS TKV MQG+ VGRAVDL GY +L+ +E++FDIKGEL S
Sbjct: 508 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL-RSRN 566
Query: 537 KWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPM 586
+W++V+TD+E DMM+VGDDPW EFC++V++IFI++ EEVKK++P L M
Sbjct: 567 QWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRM 616
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 534 bits (1375), Expect = e-152, Method: Compositional matrix adjust.
Identities = 306/592 (51%), Positives = 392/592 (66%), Gaps = 34/592 (5%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLP-ETDQSEVASPDEPLPEPTR 63
L P F LP KILC V+N+ L+AE +TDEVYAQITL+P T+ E SPD PE R
Sbjct: 51 LNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQR 110
Query: 64 CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRH 123
VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDMTQQ P QELVA D+HG +W F+H
Sbjct: 111 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKH 170
Query: 124 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVIS 183
IFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGELRVGVRR QQS+MPSSVIS
Sbjct: 171 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVIS 230
Query: 184 SHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRF 243
SHSMHLGVLATA HA T T+F V+YKPRT S+FI+S+NKYLEA ++K SVGMRFKMRF
Sbjct: 231 SHSMHLGVLATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRF 288
Query: 244 EGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVST 303
EGE+ PERR+SGT++GV+ + S W DS+WR L+V WDEP+SI RP++VSPWE+EP V++
Sbjct: 289 EGEDSPERRYSGTVIGVK-DCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNS 347
Query: 304 PPANSQPTPRNKRSR--PPVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLYASPKFN 361
+NKR R V + ++ +W S + P + S +
Sbjct: 348 ENVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQP----------HEFAQSCITS 397
Query: 362 STATSFFCFGGNNSASNKSTY----WSTRMENSTETFSPIALKESGEKRQGTGNGCRLFG 417
++ C N + KS + +S T + + +K+ T RLFG
Sbjct: 398 QWSSPQQCHRDANEDAKKSDWLNNSYSVSNVAKDSTLNDQMVSPVEQKKPETTANYRLFG 457
Query: 418 IQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSC 477
I L+ +S A +P + + S P++D+ SD SE S V+ ++
Sbjct: 458 IDLMSSSLA---VPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEE-------KKQEPA 507
Query: 478 LRSPQESQSRQ---IRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGS 534
SP+E QS+Q RS TKV MQG+ VGRAVDL GY +L+ +E++FDIKGEL S
Sbjct: 508 EGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL-RS 566
Query: 535 AKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPM 586
+W++V+TD+E DMM+VGDDPW EFC++V++IFI++ EEVKK++P L M
Sbjct: 567 RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRM 618
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/348 (69%), Positives = 284/348 (81%), Gaps = 6/348 (1%)
Query: 2 NQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDE-PLPE 60
NQ E QMP ++LP K+LC+V+N+ L+AE +TDEVYAQITLLPE +Q E A E PLP
Sbjct: 96 NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P R VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH NEW
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMHLGVLATA HAI+TGT+F+V+YKPRTS SEFIV ++Y+E+ + S+GMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RF+GTIVG+E ++ + W S+WRSLKV+WDE SSI RPDRVSPW++EP
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
Query: 301 VSTPPANSQPTPRNKRSRPPVLPSTIPDSS----QGVWKSPVDSPPFS 344
++ P + P PR KR R + PS+ PDSS +G K+ +D P S
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSS-PDSSMLTREGTTKANMDPLPAS 442
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 19/190 (10%)
Query: 400 KESGEKRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSI-----PSLDAESDQ 454
+E+ + R+G CRLFGI L N N +S T++ L D + P + SDQ
Sbjct: 644 EETAKSREGN---CRLFGIPLTNNMNGTDS--TMSQRNNLNDAAGLTQIASPKVQDLSDQ 698
Query: 455 H--SEPSNVNRSDIPSVSCDAEKSCLRSPQESQSR--QIRSCTKVHMQGMAVGRAVDLTQ 510
S+ +N +R + P+++Q++ RSCTKVH QG+A+GR+VDL++
Sbjct: 699 SKGSKSTNDHREQGRPFQTNNPH-----PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSK 753
Query: 511 FDGYEDLLRKLEEMFDIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIY 570
F YE+L+ +L+ +F+ GEL K W +VYTD E+DMM+VGDDPW EFC +VRKIFIY
Sbjct: 754 FQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIY 813
Query: 571 TAEEVKKLSP 580
T EEV+K++P
Sbjct: 814 TKEEVRKMNP 823
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/348 (69%), Positives = 284/348 (81%), Gaps = 6/348 (1%)
Query: 2 NQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDE-PLPE 60
NQ E QMP ++LP K+LC+V+N+ L+AE +TDEVYAQITLLPE +Q E A E PLP
Sbjct: 96 NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P R VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH NEW
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMHLGVLATA HAI+TGT+F+V+YKPRTS SEFIV ++Y+E+ + S+GMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RF+GTIVG+E ++ + W S+WRSLKV+WDE SSI RPDRVSPW++EP
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
Query: 301 VSTPPANSQPTPRNKRSRPPVLPSTIPDSS----QGVWKSPVDSPPFS 344
++ P + P PR KR R + PS+ PDSS +G K+ +D P S
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSS-PDSSMLTREGTTKANMDPLPAS 442
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 19/190 (10%)
Query: 400 KESGEKRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSI-----PSLDAESDQ 454
+E+ + R+G CRLFGI L N N +S T++ L D + P + SDQ
Sbjct: 644 EETAKSREGN---CRLFGIPLTNNMNGTDS--TMSQRNNLNDAAGLTQIASPKVQDLSDQ 698
Query: 455 H--SEPSNVNRSDIPSVSCDAEKSCLRSPQESQSR--QIRSCTKVHMQGMAVGRAVDLTQ 510
S+ +N +R + P+++Q++ RSCTKVH QG+A+GR+VDL++
Sbjct: 699 SKGSKSTNDHREQGRPFQTNNPH-----PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSK 753
Query: 511 FDGYEDLLRKLEEMFDIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIY 570
F YE+L+ +L+ +F+ GEL K W +VYTD E+DMM+VGDDPW EFC +VRKIFIY
Sbjct: 754 FQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIY 813
Query: 571 TAEEVKKLSP 580
T EEV+K++P
Sbjct: 814 TKEEVRKMNP 823
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/348 (69%), Positives = 284/348 (81%), Gaps = 6/348 (1%)
Query: 2 NQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDE-PLPE 60
NQ E QMP ++LP K+LC+V+N+ L+AE +TDEVYAQITLLPE +Q E A E PLP
Sbjct: 96 NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P R VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH NEW
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMHLGVLATA HAI+TGT+F+V+YKPRTS SEFIV ++Y+E+ + S+GMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RF+GTIVG+E ++ + W S+WRSLKV+WDE SSI RPDRVSPW++EP
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
Query: 301 VSTPPANSQPTPRNKRSRPPVLPSTIPDSS----QGVWKSPVDSPPFS 344
++ P + P PR KR R + PS+ PDSS +G K+ +D P S
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSS-PDSSMLTREGTTKANMDPLPAS 442
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 19/190 (10%)
Query: 400 KESGEKRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSI-----PSLDAESDQ 454
+E+ + R+G CRLFGI L N N +S T++ L D + P + SDQ
Sbjct: 644 EETAKSREGN---CRLFGIPLTNNMNGTDS--TMSQRNNLNDAAGLTQIASPKVQDLSDQ 698
Query: 455 H--SEPSNVNRSDIPSVSCDAEKSCLRSPQESQSR--QIRSCTKVHMQGMAVGRAVDLTQ 510
S+ +N +R + P+++Q++ RSCTKVH QG+A+GR+VDL++
Sbjct: 699 SKGSKSTNDHREQGRPFQTNNPH-----PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSK 753
Query: 511 FDGYEDLLRKLEEMFDIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIY 570
F YE+L+ +L+ +F+ GEL K W +VYTD E+DMM+VGDDPW EFC +VRKIFIY
Sbjct: 754 FQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIY 813
Query: 571 TAEEVKKLSP 580
T EEV+K++P
Sbjct: 814 TKEEVRKMNP 823
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/348 (69%), Positives = 284/348 (81%), Gaps = 6/348 (1%)
Query: 2 NQGLEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDE-PLPE 60
NQ E QMP ++LP K+LC+V+N+ L+AE +TDEVYAQITLLPE +Q E A E PLP
Sbjct: 96 NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155
Query: 61 PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWH 120
P R VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QELVA DLH NEW
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215
Query: 121 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSS 180
FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275
Query: 181 VISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFK 240
VISSHSMHLGVLATA HAI+TGT+F+V+YKPRTS SEFIV ++Y+E+ + S+GMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335
Query: 241 MRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPL 300
MRFEGEE PE+RF+GTIVG+E ++ + W S+WRSLKV+WDE SSI RPDRVSPW++EP
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
Query: 301 VSTPPANSQPTPRNKRSRPPVLPSTIPDSS----QGVWKSPVDSPPFS 344
++ P + P PR KR R + PS+ PDSS +G K+ +D P S
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSS-PDSSMLTREGTTKANMDPLPAS 442
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 19/190 (10%)
Query: 400 KESGEKRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSI-----PSLDAESDQ 454
+E+ + R+G CRLFGI L N N +S T++ L D + P + SDQ
Sbjct: 644 EETAKSREGN---CRLFGIPLTNNMNGTDS--TMSQRNNLNDAAGLTQIASPKVQDLSDQ 698
Query: 455 H--SEPSNVNRSDIPSVSCDAEKSCLRSPQESQSR--QIRSCTKVHMQGMAVGRAVDLTQ 510
S+ +N +R + P+++Q++ RSCTKVH QG+A+GR+VDL++
Sbjct: 699 SKGSKSTNDHREQGRPFQTNNPH-----PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSK 753
Query: 511 FDGYEDLLRKLEEMFDIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIY 570
F YE+L+ +L+ +F+ GEL K W +VYTD E+DMM+VGDDPW EFC +VRKIFIY
Sbjct: 754 FQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIY 813
Query: 571 TAEEVKKLSP 580
T EEV+K++P
Sbjct: 814 TKEEVRKMNP 823
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 277/554 (50%), Positives = 346/554 (62%), Gaps = 68/554 (12%)
Query: 50 EVASPDEPLPEPTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQEL 109
E S D PL EP + TV SF K LTASDTSTHGGFSVLR+HA +CLP LDMTQ P QEL
Sbjct: 18 EPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQEL 77
Query: 110 VATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRR 169
VA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGDAF+FLRGE G+LRVGVRR
Sbjct: 78 VARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRR 137
Query: 170 LMRQQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAR 229
L +QQS MP+SVISS SM LGVLATASHA+ T T+F VFYKPR S+FI+SVNKY+ A
Sbjct: 138 LAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM 195
Query: 230 NHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRP 289
+ S+GMR++MRFEGEE PER F+GTI+G + SS W S+WRSL++QWDEPSSI RP
Sbjct: 196 KNGFSLGMRYRMRFEGEESPERIFTGTIIG-SGDLSSQWPASKWRSLQIQWDEPSSIQRP 254
Query: 290 DRVSPWELEPLVSTPPANSQPTP-----RNKRSRPPVLPSTIPDSSQGVWKSPVDSPPFS 344
++VSPWE+EP P+ PTP ++KRSRP + SPV S S
Sbjct: 255 NKVSPWEIEPF---SPSALTPTPTQQQSKSKRSRP----------ISEITGSPVASSFLS 301
Query: 345 YRDPQHGRDLYASPKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESGE 404
H + F AT SNKS + S TE +P+
Sbjct: 302 SFSQSHESNPSVKLLFQDPAT--------ERNSNKSVFSSGLQCKITE--APVT------ 345
Query: 405 KRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRS 464
+ CRLFG L + A ++P D+ + S+D SN++ S
Sbjct: 346 ------SSCRLFGFD-LTSKPASATIP---------HDKQLISVD---------SNISDS 380
Query: 465 DIPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEM 524
+ C S ++ Q RS KV MQG AVGRAVDLT Y++L+++LE+M
Sbjct: 381 ---TTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKM 437
Query: 525 FDIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGL 584
F+I+GEL KW +V+TD+E D M+VGDDPW EFC + +K+FIY ++EVKK+ K L
Sbjct: 438 FEIEGEL-SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 496
Query: 585 PMNDEGKPSKLDSE 598
D+G L+S+
Sbjct: 497 --GDKGTIVNLESD 508
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/586 (41%), Positives = 345/586 (58%), Gaps = 53/586 (9%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L P + P K+ C+V+ I L+ E +DE YA+ITL+P+T Q + + ++ P
Sbjct: 65 LNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRPL-- 122
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+SF K LTASDTS HGGFSV ++HA +CLPPLDM+Q P QE++A DLHGN+W FRHI
Sbjct: 123 -VNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHI 181
Query: 125 FRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISS 184
+RG +RHLLT GW+ F +SKKLV GD +F+RGE GELRVG+RR QQ N+PSS++S
Sbjct: 182 YRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSI 241
Query: 185 HSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFE 244
SM G++A+A HA +F V YKPR+ S+FIVS +K+L+ N+K +VG RF MRFE
Sbjct: 242 ESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVVNNKFNVGSRFTMRFE 299
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTP 304
G++ ERR GTI+GV + S W SEWRSL+VQWDE +S RP++VSPW++E L
Sbjct: 300 GDDFSERRSFGTIIGVS-DFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWS 358
Query: 305 PANSQPTPRNKRSRPPVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLYASPKFNSTA 364
+ +NKRSR + I SS + PP + + G+ A+P S
Sbjct: 359 NVSRSSFLKNKRSRE---VNEIGSSSSHLL------PPTLTQGQEIGQQSMATPMNISLR 409
Query: 365 TSFFCFGGNNSASNKSTYWSTRME--NSTETFSPIALKESGEKRQGTGNGC---RLFGIQ 419
+ +Y M N +PI + T N RLFG+
Sbjct: 410 YRDITEDAMTPSRLLMSYPVQPMAKLNYNNVVTPI-------EENITTNAVASFRLFGVS 462
Query: 420 LLENSNAEESLPTVTLS-GRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSCL 478
L S ++ + + L RL ++ +S P+ +
Sbjct: 463 LATPSVIKDPVEQIGLEISRLTQEKKF----GQSQILRSPTEI----------------- 501
Query: 479 RSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKKW 538
+S Q S +R +CTKV MQG+ +GRAVDL+ +GY+ L+ +LE++FD+KG+L + +W
Sbjct: 502 QSKQFSSTR---TCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL-QARNQW 557
Query: 539 QVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGL 584
++ +T+NE+D M+VG+DPW EFC++V+KIFIY+ EEVK L + L
Sbjct: 558 EIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSL 603
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/593 (41%), Positives = 341/593 (57%), Gaps = 82/593 (13%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L P +LP K+ C+V+ IHL+ E +DE+YA+ITL+P+T Q + + E P
Sbjct: 65 LNELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL-- 122
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+SF K LTASDTS +GGFSV ++HA +CLPPLDM+Q P QE++A DLH N+W FRH
Sbjct: 123 -VNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHN 181
Query: 125 FRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISS 184
+RG P+RH LTTGW+ F++SKKLV GD +F+RGE GELRVG+RR QQ N+PSS++S
Sbjct: 182 YRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSI 241
Query: 185 HSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFE 244
M GV+A+A HA +F V YKPR+ S+FIVS +K+L+A N+K +VG RF MRFE
Sbjct: 242 DCMRHGVIASAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFE 299
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTP 304
G++ ERR+ GTI+GV + S W SEWRSL+VQWDE +S RP++VSPWE+E LV
Sbjct: 300 GDDFSERRYFGTIIGVS-DFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL 358
Query: 305 PANSQPTPRNKRSR-------------PPVLPSTIPDSSQGVWKSPVDSP---PFSYRDP 348
+NKR R PP+L Q + + V SP YRD
Sbjct: 359 NVPRSSLLKNKRLREVNEFGSSSSHLLPPIL-----TQGQEIGQLSVASPMNISLRYRDT 413
Query: 349 QHG-----RDLYASPKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESG 403
R L + P ++ NN T++E + T
Sbjct: 414 TEAAMNPSRLLMSYPVQPMPKLNY-----NNQM-------VTQIEENITT---------- 451
Query: 404 EKRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNR 463
G RLFG+ L ++ P + I + ++ + +E +
Sbjct: 452 ----KAGTNFRLFGVTL-------DTPPMI--------KDPIKQIGSDISKLTERKKFGQ 492
Query: 464 SDIPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEE 523
S + + S Q S SR +CTKV MQG+ +GRAVDL+ +GY+ L+ +LE+
Sbjct: 493 SQTLRSPIEIQ-----SKQFSSSR---TCTKVQMQGVTIGRAVDLSVLNGYDQLILELEK 544
Query: 524 MFDIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVK 576
+FDIKG+L + +W++ +TD++ M+VGDDPW EFC +V+KI IY+ EEVK
Sbjct: 545 LFDIKGQL-QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/584 (41%), Positives = 337/584 (57%), Gaps = 78/584 (13%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L P +LP K+ C+V+ IHL+ E +DE YA+ITL+P+T Q + + +E R
Sbjct: 65 LNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNE---NQFRP 121
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+SF K LTASDTS HGGF V ++HA +CLP LDM+Q P QEL+A DLHGN+W F H
Sbjct: 122 LVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHN 181
Query: 125 FRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISS 184
+RG P+RHLLTTGW+ F +SKKLVAGD +F+RGE GELRVG+RR QQ N+PSS++S
Sbjct: 182 YRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSI 241
Query: 185 HSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFE 244
M GV+A+A HA +F+V YKPR+S+ FIVS +K+L+A N+K +VG RF MR E
Sbjct: 242 DCMRHGVVASAKHAFDNQCMFTVVYKPRSSK--FIVSYDKFLDAVNNKFNVGSRFTMRLE 299
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTP 304
G++ ERR GTI+GV + S W SEWRSL+VQWDE +S P +VSPW++E L+
Sbjct: 300 GDDFSERRCFGTIIGVS-DFSPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLM--- 355
Query: 305 PANSQPTP---RNKRSR-------------PPVLPSTIPDSSQGVWKSPVDSPPFSYRDP 348
PA + P +NKR R PP+L + V SP++ YRD
Sbjct: 356 PAINVPRSFLLKNKRLREVNEIGSSSSHLLPPILTQGQENEQLSV-ASPMNI-SLRYRDA 413
Query: 349 QHGRDLYASPKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESGEKRQG 408
+ + NN T ME + T
Sbjct: 414 TEDAMNPSKLLMSYPVQPMPKLNYNNQM-------VTEMEENITT--------------K 452
Query: 409 TGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPS 468
TG RLFG+ L ++ P + I + +E + +E S
Sbjct: 453 TGTNFRLFGVTL-------DTPPVI--------KDPIEEIGSEISKLTEGKKFGLS---- 493
Query: 469 VSCDAEKSCLRSPQESQSRQI---RSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMF 525
LRSP E Q++Q R+CTKV MQG+ +GRAVDL+ +GY+ L+ +LE++F
Sbjct: 494 -------QTLRSPTEIQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLF 546
Query: 526 DIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFI 569
DIKG+L + +W++ +TD+++D M+VGDDPW EFC++V+KIFI
Sbjct: 547 DIKGQL-QTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/593 (42%), Positives = 348/593 (58%), Gaps = 96/593 (16%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L P +LP K+ C+V+ I L+ E +DE YA+ITL+P+T Q + + +E R
Sbjct: 65 LNELKPICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNE---NQFRP 121
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+SF K LTASDTS GGF V ++HA +CLPPLDM+Q P QEL+ATDLHGN+W F H
Sbjct: 122 LVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHN 179
Query: 125 FRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISS 184
+RG P+RHLLTTGW+ F +SKKLVAGD +F+RGE GELRVG+RR QQ N+PSS+IS
Sbjct: 180 YRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISI 239
Query: 185 HSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFE 244
SM GV+A+A HA +F V YKPR+ S+FIVS +K+L+A N+K +VG RF MRFE
Sbjct: 240 ESMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFE 297
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTP 304
G++ ERR+ GTI+GV + S W SEWR+L+VQWDE +S RP++VSPWE+E L+
Sbjct: 298 GDDFSERRYFGTIIGVS-DFSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLM--- 353
Query: 305 PANSQPTP---RNKRSR-------------PPVLPSTIPDSSQGVWKSPVDSP---PFSY 345
PA + P P +NKR R PP+L Q + + V SP +Y
Sbjct: 354 PALNVPRPSLLKNKRLREVNEIGSSSSHLLPPIL-----TQGQEIGQLSVASPMNISLTY 408
Query: 346 RDPQH-----GRDLYASPKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALK 400
RD R L + P ++ NN T++E + T
Sbjct: 409 RDTTEDVMNPSRLLMSYPVQPMPKLNY-----NNQM-------VTQIEENITT------- 449
Query: 401 ESGEKRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSN 460
TG RLFG+ L+ P+V I + +E + +E
Sbjct: 450 -------KTGTNFRLFGVSLVT--------PSVI-------KDPIEEIGSEISKLTEGKK 487
Query: 461 VNRSDIPSVSCDAEKSCLRSPQESQSRQI---RSCTKVHMQGMAVGRAVDLTQFDGYEDL 517
+S LRSP E QS+Q R+CTKV MQG+ + RAVDL+ +GY+ L
Sbjct: 488 FGQS-----------QTLRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQL 536
Query: 518 LRKLEEMFDIKGELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIY 570
+ +LEE+FD+KG+L + +W++ +TD++DD M+VGDDPW EFC++V+KI I+
Sbjct: 537 ILELEELFDLKGQL-QTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 588
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 321/575 (55%), Gaps = 62/575 (10%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L P +LP K+ C+V+ IHL+ E +DE YA+ITL+P+T Q + + E P
Sbjct: 65 LNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPL-- 122
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+SF K LTASDTS +GGF V ++HA +CLPPL + P QEL+A DLHGN+W FRH
Sbjct: 123 -VNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHS 177
Query: 125 FRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISS 184
+RG P+RH LTTGW+ F +SKKLV GD +F+RGE GELRVG+RR QQ N+PSS++S
Sbjct: 178 YRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSI 237
Query: 185 HSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFE 244
M GV+A+A HA+ +F V YKP S+FIVS +K+L+A N+K VG RF MRFE
Sbjct: 238 DCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFE 297
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTP 304
G++ ERR+ GTI+GV + S W SEWRSL+VQWDE +S RP++VSPWE+E L+S
Sbjct: 298 GDDFSERRYFGTIIGVN-DFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL 356
Query: 305 PANSQPTPRNKRSRPPVLPSTIPDSSQGVWKSPVDSP---PFSYRDPQHGRDLYASPKFN 361
+NKR R + + Q + + V SP YRD +
Sbjct: 357 NVPRSSLLKNKRLR------EVNEFGQEIGQLSVASPMNTSLRYRDTTE----------D 400
Query: 362 STATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESGEKRQGTGNGCRLFGIQLL 421
+ S K Y + + E + A+ RLFG+ L
Sbjct: 401 AMNPSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAV-----------TNFRLFGVSL- 448
Query: 422 ENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSCLRSP 481
++P V I + ++ + +E +S + + S
Sbjct: 449 -------AIPLVI-------KDPIEEIGSDISKLTEGKKFGQSQTLRSPIEIQSKQFGST 494
Query: 482 QESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKKWQVV 541
+ Q++ T +GRAVDL+ +GY+ L+ +LE++FD+KG+L + +W++
Sbjct: 495 RTCTKVQMQGVT--------IGRAVDLSVLNGYDQLILELEKLFDLKGQL-QTRNQWKIA 545
Query: 542 YTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVK 576
+TD++ M+VGDDPW EFC +V+KI IY+ EEVK
Sbjct: 546 FTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/581 (39%), Positives = 323/581 (55%), Gaps = 67/581 (11%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSE---VASPDEPLPEP 61
L P +LP K+ C+V+ IHL+ E +DE YA+ITL+P+T SE V P +
Sbjct: 65 LNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQN-ENQ 123
Query: 62 TRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHF 121
R V+SF K LTASD S +G FSV ++HA +CLPPLDM+Q P QEL+A DLHGN+W F
Sbjct: 124 FRPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSF 183
Query: 122 RHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSV 181
RH +RG P+RHLLTTGW+ F +SKKLV GD +F+RGE GELRVG+RR QQ N+PSS+
Sbjct: 184 RHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSI 243
Query: 182 ISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKM 241
+S M GV+A+A HA +F V YKPR+ S+FIVS +K+L+A N+K +VG RF M
Sbjct: 244 VSIDCMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTM 301
Query: 242 RFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV 301
RFEG+++ ERR+ GTI+GV N S W S+WRSL+VQWDE +S LRP++VSPWE+E L+
Sbjct: 302 RFEGDDLSERRYFGTIIGVS-NFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLM 360
Query: 302 STPPANSQPTPRNKRSR-------------PPVLPSTIPDSSQGVWKSPVDSPPFSYRDP 348
+NKR R PP+L +QG + S P
Sbjct: 361 PALNVPRSSFLKNKRLREVNEFGSSSSHLLPPIL-------TQG-----QEIGQLSVASP 408
Query: 349 QHGRDLYASPKFNSTATSFFCFGGNNSASNKSTYWSTRMENSTETFSPIALKESGEKRQG 408
+ LY ++ S K Y + + E + A
Sbjct: 409 MNISLLYRETTEDAMNPSRLLMSYPVQPMPKRNYNNQMVTQIEENITTKA---------- 458
Query: 409 TGNGCRLFGIQLLENSNAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPS 468
G RLFG+ L + P V I + ++ + +E +S
Sbjct: 459 -GTNFRLFGVSL--------ATPPVI-------KDPIEQIGSDISKLTEGKKFGQSQTLR 502
Query: 469 VSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIK 528
+ S + Q++ T G AV +V +GY+ L+ +LE++FD+K
Sbjct: 503 SPTKIQSKQFSSTRTCTKVQMQGVTI----GRAVDLSV----LNGYDQLILELEKLFDLK 554
Query: 529 GELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFI 569
G+L + +W++++T +++D M+VGDDPW EFC++V++I+I
Sbjct: 555 GQL-QTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/327 (54%), Positives = 233/327 (71%), Gaps = 5/327 (1%)
Query: 2 NQGLEHQMPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEP--L 58
N+ ++ +P++ +L +++C++ N+ + A+ ETDEVYAQ+TL P Q E P P L
Sbjct: 58 NKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQ-EQKDPYLPAEL 116
Query: 59 PEPTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNE 118
P+R + FCKTLTASDTSTHGGFSV RR A+ PPLD +QQPP QEL+A DLH NE
Sbjct: 117 GVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNE 176
Query: 119 WHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMP 178
W FRHIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ +F+ + +L +G+RR R Q+ MP
Sbjct: 177 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMP 236
Query: 179 SSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNH-KLSVGM 237
SSV+SS SMHLG+LA A+HA AT + F++FY PR S SEF++ + KY++A H ++SVGM
Sbjct: 237 SSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGM 296
Query: 238 RFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWEL 297
RF+M FE EE RR+ GTI G+ + + WA+S WRS+KV WDE ++ R RVS WE+
Sbjct: 297 RFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEI 356
Query: 298 EPLVSTPPANSQPTPRNKRSRPPVLPS 324
EPL + P S R KR PP LPS
Sbjct: 357 EPLTTFPMYPSPFPLRLKRPWPPGLPS 383
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 101/179 (56%), Gaps = 14/179 (7%)
Query: 415 LFGIQLLENS----NAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVS 470
LFG+ + +S N +L ++ + G GD ++P S+ +++ S PS S
Sbjct: 718 LFGVNIDSSSLLMPNGMSNLRSIGIEG--GDSTTLPF--TSSNFNNDFSGNLAMTTPS-S 772
Query: 471 CDAEKSCLRSPQE--SQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIK 528
C E L+S + S++ Q + KV+ G + GR++D+++F Y +L +L MF ++
Sbjct: 773 CIDESGFLQSSENLGSENPQSNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLE 831
Query: 529 GELCGSAKK-WQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPM 586
G+L + WQ+V+ D E+D++++GDDPW EF S V I I + +EV+++ K GL +
Sbjct: 832 GQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG-KRGLEL 889
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/327 (54%), Positives = 233/327 (71%), Gaps = 5/327 (1%)
Query: 2 NQGLEHQMPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEP--L 58
N+ ++ +P++ +L +++C++ N+ + A+ ETDEVYAQ+TL P Q E P P L
Sbjct: 60 NKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQ-EQKDPYLPAEL 118
Query: 59 PEPTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNE 118
P+R + FCKTLTASDTSTHGGFSV RR A+ PPLD +QQPP QEL+A DLH NE
Sbjct: 119 GVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNE 178
Query: 119 WHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMP 178
W FRHIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ +F+ + +L +G+RR R Q+ MP
Sbjct: 179 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMP 238
Query: 179 SSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNH-KLSVGM 237
SSV+SS SMHLG+LA A+HA AT + F++FY PR S SEF++ + KY++A H ++SVGM
Sbjct: 239 SSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGM 298
Query: 238 RFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWEL 297
RF+M FE EE RR+ GTI G+ + + WA+S WRS+KV WDE ++ R RVS WE+
Sbjct: 299 RFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEI 358
Query: 298 EPLVSTPPANSQPTPRNKRSRPPVLPS 324
EPL + P S R KR PP LPS
Sbjct: 359 EPLTTFPMYPSPFPLRLKRPWPPGLPS 385
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 101/179 (56%), Gaps = 14/179 (7%)
Query: 415 LFGIQLLENS----NAEESLPTVTLSGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPSVS 470
LFG+ + +S N +L ++ + G GD ++P S+ +++ S PS S
Sbjct: 720 LFGVNIDSSSLLMPNGMSNLRSIGIEG--GDSTTLPF--TSSNFNNDFSGNLAMTTPS-S 774
Query: 471 CDAEKSCLRSPQE--SQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIK 528
C E L+S + S++ Q + KV+ G + GR++D+++F Y +L +L MF ++
Sbjct: 775 CIDESGFLQSSENLGSENPQSNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLE 833
Query: 529 GELCGSAKK-WQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPM 586
G+L + WQ+V+ D E+D++++GDDPW EF S V I I + +EV+++ K GL +
Sbjct: 834 GQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG-KRGLEL 891
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/307 (54%), Positives = 226/307 (73%), Gaps = 5/307 (1%)
Query: 2 NQGLEHQMPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLPET--DQSEVASPDEPL 58
N+ ++ +P++ +LP +++C++ N+ + A+ ETDEVYAQ+TL P T +Q E P E L
Sbjct: 57 NKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-L 115
Query: 59 PEPTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNE 118
P++ + FCKTLTASDTSTHGGFSV RR A+ PPLD T QPP QEL+A DLH E
Sbjct: 116 GIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVE 175
Query: 119 WHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMP 178
W FRHIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ IF+R E +L +G+R R Q+ +P
Sbjct: 176 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVP 235
Query: 179 SSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNH-KLSVGM 237
SSV+SS SMH+G+LA A+HA AT + F+VF+ PR S+SEF++ ++KY++A H ++SVGM
Sbjct: 236 SSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGM 295
Query: 238 RFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWEL 297
RF+M FE EE RR+ GTI G+ +S W +S WRS+KV WDE ++ R RVS WE+
Sbjct: 296 RFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEI 355
Query: 298 EPLVSTP 304
EPL + P
Sbjct: 356 EPLTTFP 362
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 482 QESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKK-WQV 540
Q + S Q ++ KV+ G +VGR++D+++F Y +L +L +MF I+G L + WQ+
Sbjct: 697 QINSSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQL 755
Query: 541 VYTDNEDDMMMVGDDPW 557
V+ D E+D++++GDDPW
Sbjct: 756 VFVDKENDILLLGDDPW 772
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/307 (54%), Positives = 226/307 (73%), Gaps = 5/307 (1%)
Query: 2 NQGLEHQMPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLPET--DQSEVASPDEPL 58
N+ ++ +P++ +LP +++C++ N+ + A+ ETDEVYAQ+TL P T +Q E P E L
Sbjct: 57 NKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-L 115
Query: 59 PEPTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNE 118
P++ + FCKTLTASDTSTHGGFSV RR A+ PPLD T QPP QEL+A DLH E
Sbjct: 116 GIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVE 175
Query: 119 WHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMP 178
W FRHIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ IF+R E +L +G+R R Q+ +P
Sbjct: 176 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVP 235
Query: 179 SSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNH-KLSVGM 237
SSV+SS SMH+G+LA A+HA AT + F+VF+ PR S+SEF++ ++KY++A H ++SVGM
Sbjct: 236 SSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGM 295
Query: 238 RFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWEL 297
RF+M FE EE RR+ GTI G+ +S W +S WRS+KV WDE ++ R RVS WE+
Sbjct: 296 RFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEI 355
Query: 298 EPLVSTP 304
EPL + P
Sbjct: 356 EPLTTFP 362
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 482 QESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKK-WQV 540
Q + S Q ++ KV+ G +VGR++D+++F Y +L +L +MF I+G L + WQ+
Sbjct: 697 QINSSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQL 755
Query: 541 VYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKL 578
V+ D E+D++++GDDPW F + V I I + E+V ++
Sbjct: 756 VFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/331 (48%), Positives = 219/331 (66%), Gaps = 12/331 (3%)
Query: 8 QMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPE------- 60
++P F+L +I+C+VVN+ L A +TDEVY Q+TLLP + S + + + E
Sbjct: 105 EIPKFDLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEER 164
Query: 61 ----PTRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHG 116
+ T H FCKTLTASDTSTHGGFSV RR A+DC PLD QQ P QEL+A DLHG
Sbjct: 165 NGSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHG 224
Query: 117 NEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSN 176
EW FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLR E GELR+G+RR R ++
Sbjct: 225 VEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNG 284
Query: 177 MPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVG 236
+P S+I +S +L+ ++A++T ++F VFY PR + +EF++ KY+ + + +G
Sbjct: 285 LPDSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIG 343
Query: 237 MRFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWE 296
RF+MRFE ++ PERR +G + GV + W +S+WR L V+WDE +RVSPWE
Sbjct: 344 TRFRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWE 403
Query: 297 LEPLVSTPPANSQPTPRNKRSRPPVLPSTIP 327
++P VS P + Q +PR KR +L +T P
Sbjct: 404 IDPSVSLPHLSIQSSPRPKRPWAGLLDTTPP 434
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 72/92 (78%)
Query: 485 QSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKKWQVVYTD 544
QS R CTKVH QG VGRA+DL++ +GY+DLL +LE +F+++G L K W+++YTD
Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTD 719
Query: 545 NEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVK 576
+E+DMM+VGDDPW +FC+VV KI +YT EEV+
Sbjct: 720 SENDMMVVGDDPWHDFCNVVWKIHLYTKEEVE 751
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 232/353 (65%), Gaps = 21/353 (5%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L+H P F+LP K+ C+VV I + + TDEVYAQI+L+P+T +EV + + + + R
Sbjct: 63 LDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDT--TEVMTHNTTM-DTRRP 119
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+ F K LTASD S GG + +++A +C PPLDM+Q Q LVA DL+G EW F+H+
Sbjct: 120 IVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHV 179
Query: 125 FRGQPRRHLLTTG--WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVI 182
FRG P+RH+ T+G WSVF ++K+L+ GD F+ LRGENGELR G+RR QQ ++PSSVI
Sbjct: 180 FRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVI 239
Query: 183 SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMR 242
S++ M GV+A+ +A T +F+V YKP S S+F++S +K+++A N+ VG RF+M+
Sbjct: 240 SANCMQHGVIASVVNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYIVGSRFRMQ 297
Query: 243 FEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 302
FEG++ E+R+ GTI+GV + S W DSEWRSLKVQWDE S LRP++VSPW++E L+
Sbjct: 298 FEGKDFSEKRYDGTIIGVN-DMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLI- 355
Query: 303 TPPANSQPTPRNKRSRPPVLPSTIPDSSQGVW----------KSPVDSPPFSY 345
P++ K+ + + + I + +W SP+ P FSY
Sbjct: 356 --PSSDISQSSLKKKKHWLQLNEIGATLSNLWTCQEIGQRSMNSPISVPEFSY 406
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 210/294 (71%), Gaps = 3/294 (1%)
Query: 8 QMPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEV-ASPDEPLPEPTRCT 65
Q+P++ NLP +++C+V N+ L A+ ++DE+YAQ++L P + +V PD + ++
Sbjct: 95 QVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHP 154
Query: 66 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIF 125
FCKTLTASDTSTHGGFSV RR A+ PPLD + QPP QELV DLH N W FRHI+
Sbjct: 155 TEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIY 214
Query: 126 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSH 185
RGQP+RHLLTTGWS+FV SK+L AGD+ +F+R E +L VGVRR RQQ+ +PSSV+S+
Sbjct: 215 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSAD 274
Query: 186 SMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAR-NHKLSVGMRFKMRFE 244
SMH+GVLA A+HA A T F +FY PR +EF++ + KY +A +LSVGMRF M FE
Sbjct: 275 SMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFE 334
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELE 298
E+ +RR+ GTIVG+ + W S+WR+L+V+WDEP +P RVSPW++E
Sbjct: 335 TEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 124/279 (44%), Gaps = 41/279 (14%)
Query: 325 TIPDSSQG-----VWKSPVDSPPFSYRDPQHGRDLYASPKFNSTATSFFCFGGNNSASNK 379
+PDS+ VW + ++ F P +DLYAS C S S
Sbjct: 643 VLPDSTNSPLFHDVWDTQLNGLKFDQFSPLMQQDLYASQNI--------CM----SNSTT 690
Query: 380 STYWSTRMENST-ETFSPIALKESGEKRQGTGNGCRLFGIQLLENSNAEESLPTVTLSGR 438
S + N+ + F A+K++ Q +GC + N++ + + + S
Sbjct: 691 SNILDPPLSNTVLDDF--CAIKDT--DFQNHPSGCLVGN----NNTSFAQDVQSQITSAS 742
Query: 439 LGDDQSIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSCLRSPQESQSRQ------IRSC 492
D Q+ D P N + S + D + LR + S Q +R+
Sbjct: 743 FADSQAFSRQDF-------PDNSGGTGTSSSNVDFDDCSLRQNSKGSSWQKIATPRVRTY 795
Query: 493 TKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCG-SAKKWQVVYTDNEDDMMM 551
TKV G +VGR++D+T F YE+L +E MF ++G L + W++VY D E D+++
Sbjct: 796 TKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLL 854
Query: 552 VGDDPWLEFCSVVRKIFIYTAEEVKKLSPKIGLPMNDEG 590
VGDDPW EF VR I I + EV+++S + +N G
Sbjct: 855 VGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAG 893
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/297 (52%), Positives = 213/297 (71%), Gaps = 4/297 (1%)
Query: 9 MPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLP--ETDQSEVASPDEPLPEPTRCT 65
+PS+ NLP K++C + N+ L A+PETDEVYAQ+TL P + D+ + + D L + R
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQP 123
Query: 66 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIF 125
FCKTLTASDTSTHGGFSV RR A+ P LD + QPP QELVA D+H N W FRHI+
Sbjct: 124 NEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIY 183
Query: 126 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSH 185
RGQP+RHLLTTGWSVFVS+K+L AGD+ +F+R +L +G+RR RQQ + SSVISS
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSD 243
Query: 186 SMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFEG 245
SMH+GVLA A+HA A + F++FY PR + +EF+V + KY +A ++S+GMRF+M FE
Sbjct: 244 SMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFET 303
Query: 246 EEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 302
EE RR+ GT+ G+ + W +S+WR+L++ WDE ++ RP RVS W++EP+++
Sbjct: 304 EECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 360
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 484 SQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCG-SAKKWQVVY 542
+Q++++R+ TKV +G +VGR++D+ ++ GY++L L MF I+G+L W++VY
Sbjct: 1031 AQTQRMRTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1089
Query: 543 TDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLS 579
D+E+D+++VGDDPW EF + V+ I I ++ EV+++S
Sbjct: 1090 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/331 (47%), Positives = 208/331 (62%), Gaps = 15/331 (4%)
Query: 3 QGLEHQMPSFN-----LPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSE------- 50
QG Q P F+ LP + C+++++ L AE TDEVYAQ++LLPE++ E
Sbjct: 78 QGHLEQAPDFSAAIYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGI 137
Query: 51 --VASPDEPLPEPTRC-TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQ 107
V +E R T H FCKTLTASDTSTHGGFSV RR A+DC PPLD +Q P Q
Sbjct: 138 IDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQ 197
Query: 108 ELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGV 167
EL+A DLHG EW FRHI+RGQPRRHLLTTGWS FV+ KKLV+GDA +FLRG++G+LR+GV
Sbjct: 198 ELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGV 257
Query: 168 RRLMRQQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLE 227
RR + + S + +M+ + +HAI+T ++FS+ Y P+ S S FI+ K+L+
Sbjct: 258 RRASQIEGTAALSAQYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLK 317
Query: 228 ARNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSIL 287
++ +GMRFK R E E+ ERR G I G+ + W S+WR L V+WD+ +
Sbjct: 318 VVDYPFCIGMRFKARVESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANG 377
Query: 288 RPDRVSPWELEPLVSTPPANSQPTPRNKRSR 318
RVSPWE+EP S + S T KRSR
Sbjct: 378 HQQRVSPWEIEPSGSISNSGSFVTTGPKRSR 408
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/313 (50%), Positives = 214/313 (68%), Gaps = 3/313 (0%)
Query: 13 NLPCKILCKVVNIHLRAEPETDEVYAQITLLP--ETDQSEVASPDEPLPEPTRCTVHSFC 70
NLP K++C + ++ L A+ ETDEVYAQ+TL P + D+ + + D L + R FC
Sbjct: 69 NLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGL-KLNRQPTEFFC 127
Query: 71 KTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPR 130
KTLTASDTSTHGGFSV RR A+ PPLD + QPP QE+VA DLH W FRHI+RGQP+
Sbjct: 128 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPK 187
Query: 131 RHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLG 190
RHLLTTGWSVFVS+K+L AGD+ +F+R E +L +G+RR RQ + SSVISS SMH+G
Sbjct: 188 RHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIG 247
Query: 191 VLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFEGEEVPE 250
+LA A+HA A + F++F+ PR S SEF+V + KY +A ++S+GMRF+M FE E+
Sbjct: 248 ILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGV 307
Query: 251 RRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQP 310
RR+ GT+ G+ + W S+WR+L+V WDE ++ RP RVS WE+EP+++ P
Sbjct: 308 RRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPP 367
Query: 311 TPRNKRSRPPVLP 323
R K R P +P
Sbjct: 368 FFRPKYPRQPGMP 380
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Query: 484 SQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGS-AKKWQVVY 542
+Q++++R+ TKV +G +VGR++D+T++ GY++L L MF I+G+L W++VY
Sbjct: 952 NQTQRMRTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVY 1010
Query: 543 TDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLS 579
TD+E+D+++VGDDPW EF + V+ I I ++ EV+++S
Sbjct: 1011 TDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 213/298 (71%), Gaps = 5/298 (1%)
Query: 9 MPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLP--ETDQSEVASPDEPLPEPTRCT 65
+PS+ NLP K++C + N+ L A+PETDEVYAQ+TL P + D+ + + D L + R
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQP 123
Query: 66 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIF 125
FCKTLTASDTSTHGGFSV RR A+ P LD + QPP QELVA D+H N W FRHI+
Sbjct: 124 NEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIY 183
Query: 126 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSH 185
RGQP+RHLLTTGWSVFVS+K+L AGD+ +F+R +L +G+RR RQQ + SSVISS
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSD 243
Query: 186 SMHLGVLATASHAIATGTLFSVFYKPR-TSRSEFIVSVNKYLEARNHKLSVGMRFKMRFE 244
SMH+GVLA A+HA A + F++FY PR + +EF+V + KY +A ++S+GMRF+M FE
Sbjct: 244 SMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFE 303
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 302
EE RR+ GT+ G+ + W +S+WR+L++ WDE ++ RP RVS W++EP+++
Sbjct: 304 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 361
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 484 SQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCG-SAKKWQVVY 542
+Q++++R+ TKV +G +VGR++D+ ++ GY++L L MF I+G+L W++VY
Sbjct: 1032 AQTQRMRTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1090
Query: 543 TDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLS 579
D+E+D+++VGDDPW EF + V+ I I ++ EV+++S
Sbjct: 1091 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 213/298 (71%), Gaps = 5/298 (1%)
Query: 9 MPSF-NLPCKILCKVVNIHLRAEPETDEVYAQITLLP--ETDQSEVASPDEPLPEPTRCT 65
+PS+ NLP K++C + N+ L A+PETDEVYAQ+TL P + D+ + + D L + R
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQP 123
Query: 66 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIF 125
FCKTLTASDTSTHGGFSV RR A+ P LD + QPP QELVA D+H N W FRHI+
Sbjct: 124 NEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIY 183
Query: 126 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSH 185
RGQP+RHLLTTGWSVFVS+K+L AGD+ +F+R +L +G+RR RQQ + SSVISS
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSD 243
Query: 186 SMHLGVLATASHAIATGTLFSVFYKPR-TSRSEFIVSVNKYLEARNHKLSVGMRFKMRFE 244
SMH+GVLA A+HA A + F++FY PR + +EF+V + KY +A ++S+GMRF+M FE
Sbjct: 244 SMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFE 303
Query: 245 GEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 302
EE RR+ GT+ G+ + W +S+WR+L++ WDE ++ RP RVS W++EP+++
Sbjct: 304 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 361
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 484 SQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCG-SAKKWQVVY 542
+Q++++R+ TKV +G +VGR++D+ ++ GY++L L MF I+G+L W++VY
Sbjct: 1032 AQTQRMRTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1090
Query: 543 TDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLS 579
D+E+D+++VGDDPW EF + V+ I I ++ EV+++S
Sbjct: 1091 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 213/353 (60%), Gaps = 47/353 (13%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L+H P F+LP K+ C+VV I + + TDEVYAQI+L+P+T +EV + + + + R
Sbjct: 63 LDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDT--TEVMTHNTTM-DTRRP 119
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+ F K LTASD S GG + +++A +C PPLDM+Q Q LVA DL+G EW F+H+
Sbjct: 120 IVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHV 179
Query: 125 FRGQPRRHLLTTG--WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVI 182
FRG P+RH+ T+G WSVF ++K+L+ GD F+ LRGENGELR G+RR QQ ++PSSVI
Sbjct: 180 FRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVI 239
Query: 183 SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMR 242
S++ M GV+A+ +A T +F+V YKPR M+
Sbjct: 240 SANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQ 271
Query: 243 FEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 302
FEG++ E+R+ GTI+GV + S W DSEWRSLKVQWDE S LRP++VSPW++E L+
Sbjct: 272 FEGKDFSEKRYDGTIIGVN-DMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLI- 329
Query: 303 TPPANSQPTPRNKRSRPPVLPSTIPDSSQGVW----------KSPVDSPPFSY 345
P++ K+ + + + I + +W SP+ P FSY
Sbjct: 330 --PSSDISQSSLKKKKHWLQLNEIGATLSNLWTCQEIGQRSMNSPISVPEFSY 380
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 213/353 (60%), Gaps = 47/353 (13%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L+H P F+LP K+ C+VV I + + TDEVYAQI+L+P+T +EV + + + + R
Sbjct: 63 LDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDT--TEVMTHNTTM-DTRRP 119
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+ F K LTASD S GG + +++A +C PPLDM+Q Q LVA DL+G EW F+H+
Sbjct: 120 IVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHV 179
Query: 125 FRGQPRRHLLTTG--WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVI 182
FRG P+RH+ T+G WSVF ++K+L+ GD F+ LRGENGELR G+RR QQ ++PSSVI
Sbjct: 180 FRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVI 239
Query: 183 SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMR 242
S++ M GV+A+ +A T +F+V YKPR M+
Sbjct: 240 SANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQ 271
Query: 243 FEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 302
FEG++ E+R+ GTI+GV + S W DSEWRSLKVQWDE S LRP++VSPW++E L+
Sbjct: 272 FEGKDFSEKRYDGTIIGVN-DMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLI- 329
Query: 303 TPPANSQPTPRNKRSRPPVLPSTIPDSSQGVW----------KSPVDSPPFSY 345
P++ K+ + + + I + +W SP+ P FSY
Sbjct: 330 --PSSDISQSSLKKKKHWLQLNEIGATLSNLWTCQEIGQRSMNSPISVPEFSY 380
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 94/149 (63%), Gaps = 17/149 (11%)
Query: 435 LSGRLGDDQ--SIPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSCLRSPQESQSRQIRSC 492
LSG L + +IP+ + SDQ +P + DI + +A SCL +
Sbjct: 390 LSGLLLNHSLLAIPNENYNSDQMIQP---RKEDI---TTEATTSCLLFGVD--------L 435
Query: 493 TKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKKWQVVYTDNEDDMMMV 552
TKVHMQG+A+ RAVDLT GY L++KLEE+FD+K EL + +W++V+T+NE M+V
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDEL-RTRNQWEIVFTNNEGAEMLV 494
Query: 553 GDDPWLEFCSVVRKIFIYTAEEVKKLSPK 581
GDDPW EFC++ ++IFI + EE+KK+ K
Sbjct: 495 GDDPWPEFCNMAKRIFICSKEEIKKMKLK 523
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 193/632 (30%), Positives = 270/632 (42%), Gaps = 100/632 (15%)
Query: 14 LPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVA-----SPDEPLPEPTRCTVHS 68
+P +LC+V+ I A+ E+DEV+A++ L+P D V D E S
Sbjct: 60 IPPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPS 119
Query: 69 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQ 128
F KTLT SD + GGFSV R A+ P LD +PP Q ++A D+HG+ W FRHI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179
Query: 129 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMR---------------- 172
PRRHLLTTGWS FV+ KKLVAGD+ +F+R ENG+L VG+RR R
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239
Query: 173 ------------------QQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTS 214
++SN + V+ A+ AI +G F V Y PR S
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAI-SGRPFEVVYYPRAS 298
Query: 215 RSEFIVSVNKYLEARNHKLSVGMRFKMRFEGEEVPERR-FSGTIVGVEYNNSSVWADSEW 273
SEF V A GMRFKM FE E+ F GT+ V ++ W +S W
Sbjct: 299 TSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPW 358
Query: 274 RSLKVQWDEPSSILRPDRVSPW--ELEPLVSTPPANSQPTPRNKRSRP------------ 319
R L+V WDEP + RV+PW EL V P S PR K P
Sbjct: 359 RLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSI 418
Query: 320 --PVLPSTIPDSSQGVWKSPVDSPPFSYRDPQHGRDLYASPKFNSTATSFFCFGGNNSAS 377
P PS P S +D+ P + +H Y S+S
Sbjct: 419 PVPSFPSN-PLIRSSPLSSVLDNVPVGLQGARHNAHQYYGL----------------SSS 461
Query: 378 NKSTYWSTRMENSTETFSPIALKESGEKRQGTGN--GCRLFGIQLLENSNAEESLPTVTL 435
+ Y+ R S G + T N G + ++ + + L
Sbjct: 462 DLHHYYLNRPPPPPPPSSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPCNDTKSKKSHIVL 521
Query: 436 SGRLGDDQSIPSLDAESDQHSEPSNVNRSDIPS-------------VSCDAEKSCLRSPQ 482
G+L +P ++ +N+ ++ I S S D C +
Sbjct: 522 FGKL----ILPEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEGSPCSKKVH 577
Query: 483 ESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDI-KGELCGSAKKWQVV 541
++ + C KV M+ VGR +DL+ YE+L RKL +MF I K E+ S V+
Sbjct: 578 DASGLETGHC-KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEMLSS-----VL 631
Query: 542 YTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAE 573
Y D + G++P+ EF R++ I T +
Sbjct: 632 YRDASGAIKYAGNEPFSEFLKTARRLTILTEQ 663
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 192/387 (49%), Gaps = 53/387 (13%)
Query: 7 HQMPSFN---LPCKILCKVVNIHLRAEPETDEVYAQITLLP------ETDQSEVASPDEP 57
H P F+ +P ILC+VV++ A+ ETDEV+A+ITLLP + + V P
Sbjct: 41 HAPPDFHAPRVPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPP 100
Query: 58 LPEPT---RCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDL 114
+ + SF KTLT SD + GGFSV R A+ P LD + +PP Q ++A D+
Sbjct: 101 SSDGNGNGKEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDI 160
Query: 115 HGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRR----- 169
HG W FRHI+RG PRRHLLTTGWS FV+ KKL+AGD+ +FLR E+G+L VG+RR
Sbjct: 161 HGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGG 220
Query: 170 -------------------------------LMRQQSNMPSSVISSHSMHLGVLATASHA 198
+M++ N + ++ + + +A A
Sbjct: 221 LGSNAGSDNPYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVAR 280
Query: 199 IATGTLFSVFYKPRTSRSEFIVSVNKYLEARNHKLSVGMRFKMRFEGEEVPERR-FSGTI 257
A G F V Y PR S EF V A + GMRFKM FE E+ F GT+
Sbjct: 281 AACGQAFEVVYYPRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTV 340
Query: 258 VGVEYNNSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQPTPRNKRS 317
V+ + W +S WR L+V WDEP + RVSPW +E + + P + P K+
Sbjct: 341 SAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKI 400
Query: 318 RPPVLPSTIPDSSQGVWKSPVDSPPFS 344
R P P P K P+ SP F+
Sbjct: 401 RIP-QPFEFPFHGT---KFPIFSPGFA 423
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 152/317 (47%), Gaps = 38/317 (11%)
Query: 18 ILCKVVNIHLRAEPETDEVYAQITLLPETDQ-------SEVASPDEPLPEPTRCTVHSFC 70
+ C + +I L A+P TDEV+A + L P T Q S D + + + T +F
Sbjct: 63 VPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVT--TFA 120
Query: 71 KTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPR 130
K LT SD + GGFSV R AD P L+ PP Q+L TD+HG W FRHI+RG PR
Sbjct: 121 KILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPR 180
Query: 131 RHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRR--------------------- 169
RHLLTTGWS FV+SKKL+AGD+ +F+R E+ +GVRR
Sbjct: 181 RHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGY 240
Query: 170 -----LMRQQSNMPSSVI---SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVS 221
+ ++ P + + + A + + G F V + P SEF+V
Sbjct: 241 YSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVR 300
Query: 222 VNKYLEARNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEYNNSSVWADSEWRSLKVQWD 281
+ + + G R KM E E+ + IV Y + W S W+ L++ WD
Sbjct: 301 AEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWD 360
Query: 282 EPSSILRPDRVSPWELE 298
EP + RV+PW++E
Sbjct: 361 EPEILQNVKRVNPWQVE 377
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 5 LEHQMPSFNLPCKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVASPDEPLPEPTRC 64
L P+ +LP K+ C+V+ IHL+ E +DE Y +ITL+P+T Q + + +E P
Sbjct: 65 LNELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRPI-- 122
Query: 65 TVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHI 124
V+SF K LTASDTS G FSV +HA +CLPPLDM+Q P QEL+A DLHGN+W F+H
Sbjct: 123 -VNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHS 181
Query: 125 FRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVR 168
+R PR TTGW+ F +SKKLV GD +F RGE GELRVG+R
Sbjct: 182 YR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 494 KVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDI------KGELCGSAKKWQVVYTDNED 547
KV+M+G+ +GR +DL +GY DL+R L+ MF+ + ++C + K + Y D E
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMC-NEKSHVLTYADKEG 146
Query: 548 DMMMVGDDPWLEFCSVVRKIFIYTA 572
D MMVGD PW F S VR++ I A
Sbjct: 147 DWMMVGDVPWEMFLSTVRRLKISRA 171
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 493 TKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGS--AKKWQVVYTDNEDDMM 550
KV+M+G+ +GR +DL F GYE LL L MFD +CG+ K + Y D + D M
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDT-SIICGNRDRKHHVLTYEDKDGDWM 133
Query: 551 MVGDDPWLEFCSVVRKIFIYTAE 573
MVGD PW F VR++ I E
Sbjct: 134 MVGDIPWDMFLETVRRLKITRPE 156
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 493 TKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDI------KGELCGSAKKWQVVYTDNE 546
KV+M+G+ +GR +DL +GY DL+ L+ MF+ + ++C S K + Y D E
Sbjct: 85 VKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMC-SEKSHVLTYADKE 143
Query: 547 DDMMMVGDDPWLEFCSVVRKIFI 569
D MMVGD PW F S VR++ I
Sbjct: 144 GDWMMVGDVPWEMFLSSVRRLKI 166
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 493 TKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMF-DIKGELCGSAKK----------WQVV 541
KV+M G+ +GR VD+ YE+L + LEEMF + G C K + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLT 186
Query: 542 YTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPK 581
Y D E D M+VGD PW F + V+++ I E L+P+
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPR 226
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 493 TKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKGELCGSAKKWQVVYTDNEDDMMMV 552
K++M+G+ +GR V+L+ ++ Y+ L ++++F K + +++ +VY D E D ++V
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFS-KKDSWDLNRQYTLVYEDTEGDKVLV 141
Query: 553 GDDPWLEFCSVVRKIFIYTAEEVKKLSPK 581
GD PW F S V+++ + LSP+
Sbjct: 142 GDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 494 KVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKG--------------ELCGSAKKWQ 539
KV+M G+A+GR VDL YE+L + LE+MF L + ++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 540 VVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPK 581
+ Y D E D M+VGD PW F + V+++ + E L+ +
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAAR 234
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 494 KVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKG--------------ELCGSAKKWQ 539
KV+M G+A+GR VDL YE+L + LE+MF L + ++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 540 VVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPK 581
+ Y D E D M+VGD PW F + V+++ + E L+ +
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAAR 233
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 494 KVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIKG--------------ELCGSAKKWQ 539
KV+M G+A+GR VDL YE+L + LE+MF L + ++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 540 VVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPK 581
+ Y D E D M+VGD PW F + V+++ + E L+ +
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAAR 233
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 30/141 (21%)
Query: 452 SDQHSEPSNVNRSDIPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTQF 511
++ S +N+SD D EK ++++ K++M G+ +GR VDL +
Sbjct: 126 GNESSHGGQINKSD------DGEKQV-------ETKKEGMFVKINMDGVPIGRKVDLNAY 172
Query: 512 DGYEDLLRKLEEMF-----------DIKGE------LCGSAKKWQVVYTDNEDDMMMVGD 554
+ YE L ++++F D +GE L ++ + Y DNE D M+VGD
Sbjct: 173 NSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGD 232
Query: 555 DPWLEFCSVVRKIFIYTAEEV 575
PW F S V+++ + + E+
Sbjct: 233 VPWQMFVSSVKRLRVIKSSEI 253
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 67 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFR 126
H F K LT SD + ++HA++ P D L D +G W FR+ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNG---TVLDFQDKNGKMWRFRYSYW 90
Query: 127 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRG 158
+ +++T GWS FV KKL AGD F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 487 RQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFD------------------IK 528
RQ K++M G+ +GR VDL+ + YE L ++++F I
Sbjct: 146 RQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPIT 205
Query: 529 GELCGSAKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEV 575
G L G+ + + + Y DNE D M+VGD PW F S V+++ + E+
Sbjct: 206 GLLDGNGE-YTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 67 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFR 126
H F K +T SD + ++HA+ P LD + L D +G W FR+ +
Sbjct: 54 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYW 112
Query: 127 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRG 158
+ +++T GWS FV KKL AGD F RG
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 67 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFR 126
H F K +T SD + ++HA+ P LD + L DL G W FR+ +
Sbjct: 33 HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 127 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLR-----GENGELRVGVRR 169
+ +++T GWS FV KKL AGD F R G + L + RR
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 139
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 67 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVAT--DLHGNEWHFRHI 124
H F K +T SD + ++HA+ P + T + L+ D GN W FR+
Sbjct: 21 HMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYS 80
Query: 125 FRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLR 157
+ + +++T GWS FV KKL AGD F R
Sbjct: 81 YWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 482 QESQSRQIRSCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIK-GELCG----SAK 536
++S+S + KV M G R +DLT + Y +L++ LE MF GE
Sbjct: 80 KKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGS 139
Query: 537 KWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLS 579
+ Y D + D M+VGD PW F S +++ I EVK L
Sbjct: 140 DFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 491 SCTKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIK-GELC------GSAKKWQVVYT 543
S KV M G R +DL + Y +LL+ LE MF + GE C GS + Y
Sbjct: 78 SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSG--FVPTYE 135
Query: 544 DNEDDMMMVGDDPWLEFCSVVRKIFI 569
D + D M+VGD PW F S +++ I
Sbjct: 136 DKDGDWMLVGDVPWDMFSSSCKRLRI 161
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 69 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQ 128
F K +T SD + + HA+ P L D++G W FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 129 PRRHLLTTGWSVFVSSKKLVAGDAFIFLR--GENGELRVG 166
+ ++LT GWS FV K L AGD F R G++ +L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 493 TKVHMQGMAVGRAVDLTQFDGYEDLLRKLEEMFDIK-GELCG----SAKKWQVVYTDNED 547
KV M G R +DL+ + GY +LL+ LE MF GE + Y D +
Sbjct: 95 VKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDG 154
Query: 548 DMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLS 579
D M++GD PW F +++ I E K L
Sbjct: 155 DWMLIGDVPWEMFICTCKRLRIMKGSEAKGLG 186