Miyakogusa Predicted Gene

Lj0g3v0140219.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0140219.1 Non Chatacterized Hit- tr|C5Y4B4|C5Y4B4_SORBI
Putative uncharacterized protein Sb05g021440
OS=Sorghu,35.44,3e-18,seg,NULL; coiled-coil,NULL; Transpos_assoc,NULL;
Transposase_24,Transposase, Ptta/En/Spm, plant,CUFF.8567.1
         (822 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G40087.1 | Symbols:  | Plant transposase (Ptta/En/Spm family)...    78   3e-14
AT3G30200.1 | Symbols:  | Plant transposase (Ptta/En/Spm family)...    75   2e-13

>AT1G40087.1 | Symbols:  | Plant transposase (Ptta/En/Spm family) |
           chr1:14999762-15001868 REVERSE LENGTH=390
          Length = 390

 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 49/325 (15%)

Query: 474 HEVVLDDD---GEPIGPTGQIVSDLSHFLGTIARNAKFCPLIYTNFKALVKDNEDLIWGY 530
           H V++  D    +PIG +G +   L  +L  ++ +    P+ YT+++ +    +D  W  
Sbjct: 63  HRVIVHFDEYTNQPIGDSGGL---LGSWLSQLSNDIMLLPINYTDWRLVSPHIKDRAWAV 119

Query: 531 VNDKYIIPEKGRR------AVFSRINDA----WRRYKCCTKRNYFLKYSSMKERLKNRPT 580
           +  K+   +   R      A+ S+  D     WR YK    RN      ++ E L+NRP 
Sbjct: 120 IQSKFRFDDPMMRKDYVMGALGSKCKDVKLRFWREYK----RN------NLNETLQNRPE 169

Query: 581 TIPEAHFKQLMTYWRNSTIQSISQTNAKNRAKLKYIHRTGPVNFARIRAQLRATKENGEE 640
            +PE  +  L+        + + + N KN+      H  G  +F+R R +++   + G+ 
Sbjct: 170 KVPEDQWSHLVHLIFTDKWRKMQERNTKNQKNHIMPHLCGRKSFSRKRDEIKI--KTGKT 227

Query: 641 VTQPEMFVATRQSRKGKEVDKETQ------SVIPKLQDSVK---NSSESETFQSLFGKEK 691
             + E F+ +R+   G  V  E +      + +  L   V     +S  + +  +FG E+
Sbjct: 228 PCRAEFFIESRKKHDGSFVSDEAKLRAEALTTLLNLNPQVTYNGTASLDDEYSQVFGPER 287

Query: 692 SGKVHCYGRTVTPSMFKRKEEIAAIKKQHSNEMTSVKREMEGLKMLVKSLLLQQNPNFDE 751
            G+V C GR  TPS   R       +   ++E+ +       LK  VK+L  Q N     
Sbjct: 288 PGRVRCVGRGPTPSRLVRHSNATRRQDIENSELVA------QLKTQVKTLGDQVN----- 336

Query: 752 EEVNDIMGTALGNENSATPHSSTSN 776
             ++  +G  LGN       + T+N
Sbjct: 337 -AMSTFLGQILGNSTGEQASAWTAN 360


>AT3G30200.1 | Symbols:  | Plant transposase (Ptta/En/Spm family) |
           chr3:11827752-11834262 REVERSE LENGTH=510
          Length = 510

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 35/296 (11%)

Query: 484 PIGPTGQIVSDLSHFLGTIARNAKFCPLIYTNFKALVKDNEDLIWGYVNDKYIIPEKGRR 543
           P+ P  +        +G ++ +    P+ YT+++ +    +D  W  +  K+   +   R
Sbjct: 193 PLAPECKSFKWKIEVIGQLSNDVMLLPINYTDWRLVSPHIKDRAWAVIQSKFRFDDPMMR 252

Query: 544 ------AVFSRINDAWRRYKCCTKRNYFLKYSSMKERLKNRPTTIPEAHFKQLMTYWRNS 597
                 A+ SR  D   R+    KRN      ++ E L+NRP  +PE  +  L+      
Sbjct: 253 KDYVMGALGSRCKDVKLRFWREHKRN------NLNETLENRPEKVPEDQWSHLVHLRFTD 306

Query: 598 TIQSISQTNAKNRAKLKYIHRTGPVNFARIRAQLRATKENGEEVTQPEMFVATRQSRKGK 657
             + + + N KN+      H  G  +F+R R +++   + G+   + E F+ +R+   G 
Sbjct: 307 KWRKMQERNTKNQKNHIMPHLCGRKSFSRKRDEIKI--KTGKTPCRVEFFIESRKKHDGS 364

Query: 658 EVDKETQ------SVIPKLQDSVK---NSSESETFQSLFGKEKSGKVHCYGRTVTPSMFK 708
            V  E +      + +  L   V     +S  + +  +FG E+ G+VHC GR  TPS   
Sbjct: 365 FVSDEAKLRAIALTTLLNLNPQVTYNGTASLDDEYSQVFGPERPGRVHCVGRGPTPSRLV 424

Query: 709 RKEEIAAIKKQHSNEMTSVKREMEGLKMLVKSLLLQQNPNFDEEEVNDIMGTALGN 764
           R       K   ++E+ +       LK  VK+L  Q N       ++  +G  LGN
Sbjct: 425 RHSNATRRKDIENSELVA------QLKTQVKTLGDQVN------AMSTFLGQILGN 468