Miyakogusa Predicted Gene
- Lj0g3v0140069.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0140069.1 tr|G7JGD6|G7JGD6_MEDTR Transcription factor
bHLH19 OS=Medicago truncatula GN=MTR_4g097940 PE=4
SV=1,55.52,0,HLH,Helix-loop-helix domain; helix loop helix
domain,Helix-loop-helix domain; AMS (ABORTED MICROSPOR,CUFF.8530.1
(340 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 169 2e-42
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 159 2e-39
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 150 1e-36
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 147 7e-36
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 147 8e-36
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 83 2e-16
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 81 1e-15
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 79 3e-15
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 79 5e-15
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 74 1e-13
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 74 1e-13
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 74 1e-13
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 1e-12
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 69 3e-12
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 4e-12
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 67 2e-11
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 2e-11
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 66 3e-11
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 66 3e-11
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 66 3e-11
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 5e-11
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 5e-11
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 7e-11
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 64 1e-10
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 64 2e-10
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 63 3e-10
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 62 6e-10
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 60 2e-09
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 60 2e-09
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 60 2e-09
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 57 1e-08
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 57 1e-08
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 57 1e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 57 2e-08
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 57 2e-08
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 56 3e-08
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 55 8e-08
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 55 9e-08
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 55 1e-07
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 3e-07
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 52 6e-07
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 52 6e-07
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 52 6e-07
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 52 6e-07
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 8e-07
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 8e-07
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 9e-07
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 51 1e-06
AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-12896... 51 1e-06
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 50 2e-06
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 50 2e-06
AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic helix-loo... 50 2e-06
AT4G14410.2 | Symbols: bHLH104 | basic helix-loop-helix (bHLH) D... 50 2e-06
AT4G14410.1 | Symbols: bHLH104 | basic helix-loop-helix (bHLH) D... 50 2e-06
AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT1G49770.1 | Symbols: RGE1, ZOU | basic helix-loop-helix (bHLH)... 49 4e-06
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 146/215 (67%), Gaps = 15/215 (6%)
Query: 113 VKPKMESGFGENL---DFAA-VISQGAYD----DKSFLYNENKLAATATIRNQVQARDHV 164
VKP M+ + L DF++ VIS A + DK + + R+ V A++HV
Sbjct: 62 VKPMMKINNKQQLISFDFSSNVISSPAAEEIIMDKLVGRGTKRKTCSHGTRSPVLAKEHV 121
Query: 165 LAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL-EEQVADKTV 223
LAERKRREKLS++FIALSA+LPGLKK DK T+L+DAIS +KQL+EQ++TL EE+ A + +
Sbjct: 122 LAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM 181
Query: 224 ETAIFLKRSVVFGDDDGSFSDENS-----DQSLPEIEARVSGKDILIRIHCEKHHGKAVS 278
E+ I +K+S VF D++ + S S DQ+LPEIEA++S DILIRI CEK G ++
Sbjct: 182 ESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCMIN 241
Query: 279 AILVELEKHHLTVQSTSILPFGNNTLDITIVTQVN 313
IL +E L ++++ +LPFG++TLDIT++ Q++
Sbjct: 242 -ILNTIENFQLRIENSIVLPFGDSTLDITVLAQMD 275
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 121/162 (74%), Gaps = 7/162 (4%)
Query: 155 RNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
RNQ A+DH++AERKRREKL+QRF+ALSA++PGLKKMDKA+VL DA+ ++K L+E+V L
Sbjct: 145 RNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEL 204
Query: 215 EEQVADKTVETAIFLKRS-VVFGDDDGSFS----DENSDQSLPEIEARVSGKDILIRIHC 269
EEQ ++ +E+ + +K+S ++ D++ SFS D SD LPEIE R S +D+LI+I C
Sbjct: 205 EEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILC 264
Query: 270 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQ 311
EK G ++ I+ E+EK H+ + ++S+L FG TLDITI+ +
Sbjct: 265 EKQKGH-LAKIMAEIEKLHILITNSSVLNFG-PTLDITIIAK 304
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 118/171 (69%), Gaps = 19/171 (11%)
Query: 161 RDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQ--V 218
++HVLAERKRR+KL++R IALSA+LPGLKK DKATVLEDAI +LKQL+E+VK LEE+ V
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190
Query: 219 ADKTVETAIFLKRSVVF--------------GDDDGSFSDENS--DQSLPEIEARVSGKD 262
K ++ I +KRS V+ S SDE S Q++P IEARVS +D
Sbjct: 191 TKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRD 250
Query: 263 ILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQVN 313
+LIR+HCEK+ G + IL LEK L V ++ LPFGN+TL ITI+T+++
Sbjct: 251 LLIRVHCEKNKGCMIK-ILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMD 300
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 122/172 (70%), Gaps = 10/172 (5%)
Query: 150 ATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKE 209
A + R+Q A+DH+LAERKRREKL+QRF+ALSA++PGLKKMDKA+VL DAI ++K L+E
Sbjct: 114 AQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQE 173
Query: 210 QVKTLEEQVADKTVETAIFLKRSVVFGDDD--------GSFSDENSDQSLPEIEARVSGK 261
VK EEQ +KT+E+ + +K+S + D++ + +S +LPEIE RVSGK
Sbjct: 174 SVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGK 233
Query: 262 DILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQVN 313
D+LI+I CEK G + I+ E+EK L++ ++++LPFG T DI+I+ Q N
Sbjct: 234 DVLIKILCEKQKGNVIK-IMGEIEKLGLSITNSNVLPFG-PTFDISIIAQKN 283
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 122/172 (70%), Gaps = 10/172 (5%)
Query: 150 ATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKE 209
A + R+Q A+DH+LAERKRREKL+QRF+ALSA++PGLKKMDKA+VL DAI ++K L+E
Sbjct: 114 AQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQE 173
Query: 210 QVKTLEEQVADKTVETAIFLKRSVVFGDDD--------GSFSDENSDQSLPEIEARVSGK 261
VK EEQ +KT+E+ + +K+S + D++ + +S +LPEIE RVSGK
Sbjct: 174 SVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGK 233
Query: 262 DILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDITIVTQVN 313
D+LI+I CEK G + I+ E+EK L++ ++++LPFG T DI+I+ Q N
Sbjct: 234 DVLIKILCEKQKGNVIK-IMGEIEKLGLSITNSNVLPFG-PTFDISIIAQNN 283
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 12/169 (7%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQ-VKTLEE--QV 218
+HV AER+RREKL+QRF AL AV+P + KMDKA++L DAI+Y+ +LK + VKT E Q+
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQI 511
Query: 219 ADKTVETAIFL--KRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCEKHH--- 273
++ E + L +++ G D S + EIE ++ G D +IR+ K +
Sbjct: 512 KNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGM-EIEVKIIGWDAMIRVESSKRNHPA 570
Query: 274 GKAVSAIL-VELEKHHLTVQSTSILPFGNNTLDIT--IVTQVNILINLV 319
+ +SA++ +ELE +H ++ + L T+ + I TQ + +L+
Sbjct: 571 ARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQLRASLI 619
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 221
+HV AER+RREKL+QRF +L AV+P + KMDKA++L DAISY+ +LK +++ E +
Sbjct: 416 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEEL 475
Query: 222 TVETAIFLKRSVVFGDDDGSFSDE---NSDQSL---PEIEARVSGKDILIRIHCEK--HH 273
+ + K + G+ S D N + S+ E++ ++ G D +IRI C K H
Sbjct: 476 QKQIDVMNKEA---GNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHP 532
Query: 274 GKAVSAILVELE 285
G L EL+
Sbjct: 533 GAKFMEALKELD 544
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 17/137 (12%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLK---EQVKTLEEQV 218
+HV AER+RREKL+QRF +L AV+P + KMDKA++L DAISY+ +LK +Q ++ +E++
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEI 474
Query: 219 ADKTVETAIFLKRSVVFGDDDGSFSDE----NSDQSLP----EIEARVSGKDILIRIHCE 270
K + + G GS + E N D + EI+ ++ G D++IR+ C
Sbjct: 475 QKKL----DGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCG 530
Query: 271 K--HHGKAVSAILVELE 285
K H G L EL+
Sbjct: 531 KKDHPGARFMEALKELD 547
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 70/108 (64%), Gaps = 19/108 (17%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 221
+HV AER+RREKL+QRF AL +V+P + KMDKA++L DAISY+K+L+E+VK +E D+
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIME----DE 450
Query: 222 TVETAIFLKRSVVFGDDDGSFSDENSD--QSLPEIEARVSGKDILIRI 267
V T D S S+ N+ + PE++ + +++++R+
Sbjct: 451 RVGT-------------DKSLSESNTITVEESPEVDIQAMNEEVVVRV 485
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 19/113 (16%)
Query: 157 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 216
+ +A +HV AER+RREKL+QRF AL +V+P + KMDKA++L DA+SY+ +L ++K +E
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 217 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHC 269
+ E + + D D I + SG+D+ +RI+C
Sbjct: 488 E-----RERLGYSSNPPISLDSD--------------INVQTSGEDVTVRINC 521
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 19/113 (16%)
Query: 157 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 216
+ +A +HV AER+RREKL+QRF AL +V+P + KMDKA++L DA+SY+ +L ++K +E
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 217 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHC 269
+ E + + D D I + SG+D+ +RI+C
Sbjct: 488 E-----RERLGYSSNPPISLDSD--------------INVQTSGEDVTVRINC 521
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 19/113 (16%)
Query: 157 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 216
+ +A +HV AER+RREKL+QRF AL +V+P + KMDKA++L DA+SY+ +L ++K +E
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 217 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHC 269
+ E + + D D I + SG+D+ +RI+C
Sbjct: 488 E-----RERLGYSSNPPISLDSD--------------INVQTSGEDVTVRINC 521
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 147 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 206
++AA ++ HV AE++RREKL+ RF AL A++P + +MDKA++L DA+SY++
Sbjct: 234 RVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIES 293
Query: 207 LKEQVKTLEEQV-------ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVS 259
LK ++ LE ++ DK ++ S V + S N L E++ ++
Sbjct: 294 LKSKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDL-EVQVKIV 352
Query: 260 GKDILIRIHCE--KHHGKAVSAILVELE 285
G++ +IR+ E H A+ + L+E++
Sbjct: 353 GEEAIIRVQTENVNHPTSALMSALMEMD 380
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 21/168 (12%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 221
+HV AER RREKL+ RF AL AV+P + KMDK ++LEDA+ Y+ +LK + + +E +K
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVE---LEK 399
Query: 222 TVETAIFLKRSVVFGDDDGSFSD---ENSDQSLPEIEARV-SGKDILIRIHCEKHH---G 274
F + + G + S E + +IE ++ D ++R+ K H
Sbjct: 400 HAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGA 459
Query: 275 KAVSAIL-VELEKHHLTVQSTSILPFGNNTLDITIVTQVNILINLVIF 321
+ ++A++ +ELE +H ++ + ++ ++ Q N+ + L I+
Sbjct: 460 RLMNALMDLELEVNHASI----------SVMNDLMIQQANVKMGLRIY 497
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 46/57 (80%)
Query: 159 QARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLE 215
+A +HV AER+RREKL+QRF AL AV+P + KMDKA++L DAI+Y+ ++++++ E
Sbjct: 317 EALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYE 373
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 20/134 (14%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 222
HV+AER+RREKL+++FI L +++P + KMDK ++L D I+Y+ L+++V LE ++
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423
Query: 223 VETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCEKHHGKAVSAILV 282
+ KR ++ E+E + D+L+ + CE G + + V
Sbjct: 424 HKRTRTCKR-----------------KTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQV 466
Query: 283 ELEKHHLTVQSTSI 296
H L +++T++
Sbjct: 467 ---LHELGIETTAV 477
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 12/140 (8%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 222
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++ +
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE-- 112
Query: 223 VETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSG---KDILIRIHCEKHHGKAVSA 279
L+ ++ +S + +E +V+ K +++ I C K V
Sbjct: 113 ------LESRSTLLENPMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQL 166
Query: 280 ILVELEKHHLTVQSTSILPF 299
V LE +L + +T+ F
Sbjct: 167 CKV-LESLNLNILTTNFSSF 185
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 221
+H L+E+KRREKL++RF+ L +++P + K+DK ++L+D I YL+ L+++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESA 464
Query: 222 TVETAI-FLKR 231
ET I +KR
Sbjct: 465 DTETRITMMKR 475
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 221
+H L+E+KRREKL++RF+ L +++P + K+DK ++L+D I YL+ L+++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESA 464
Query: 222 TVETAI-FLKR 231
ET I +KR
Sbjct: 465 DTETRITMMKR 475
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 162 DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADK 221
+H L+E+KRREKL++RF+ L +++P + K+DK ++L+D I YL+ L+++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESA 464
Query: 222 TVETAI-FLKR 231
ET I +KR
Sbjct: 465 DTETRITMMKR 475
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 47/58 (81%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVAD 220
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++ +
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 46/56 (82%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 218
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 46/56 (82%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 218
+V++ER RR+KL+QR AL +V+P + K+DKA+V++D+I Y+++L +Q KTLE ++
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
Query: 93 SNVSSVTSSQPFHNMGAANVVKPKMESGFGENLDFAAVISQGAYDDKSFLYNENKLAATA 152
+NVSS + P + GA + V G+G +S+ D +F + +
Sbjct: 42 TNVSSAETFFPSVSGGAVSSV------GYG--------VSETGQDKYAFEHKRSGAKQRN 87
Query: 153 TIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVK 212
+++ + A+ H L+E+KRR K++++ AL ++P K DKA++L++AI YLKQL+ QV+
Sbjct: 88 SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
Query: 213 TL 214
TL
Sbjct: 148 TL 149
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 77/137 (56%), Gaps = 25/137 (18%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 222
+++AER+RR+KL+ R AL +++P + K+D+A++L DAI+Y+K+L+ + K L++++ + +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
Query: 223 --------VETAIFLKRSVVFG----------------DDDGSFSDENSDQSLPEIE-AR 257
+ + L +VV G D D S++ + P+++ A+
Sbjct: 375 ETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQ 434
Query: 258 VSGKDILIRIHCEKHHG 274
+ G++ +++ CE G
Sbjct: 435 LDGREFFVKVICEYKPG 451
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 47/61 (77%)
Query: 160 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVA 219
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIR 112
Query: 220 D 220
+
Sbjct: 113 E 113
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 160 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 218
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 52 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 110
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 160 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 218
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 111
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 46/59 (77%)
Query: 160 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 218
A ++++ER RR+KL+QR AL +V+P + KMDKA++++DAISY++ L+ + K LE ++
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 111
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 159 QARDHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAISYLKQLKEQVKTLE- 215
Q +H+ ER RR ++++ +L A+LP +++ D+A+++ AI+Y+K L++ +++LE
Sbjct: 125 QRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES 184
Query: 216 -----EQVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCE 270
+Q + VE A+ + D + D+ +P+IEA V + +++ CE
Sbjct: 185 QKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTC---IPKIEATVIQNHVSLKVQCE 241
Query: 271 KHHGKAVSAILVELEKHHLTV 291
K G+ + I + LEK LTV
Sbjct: 242 KKQGQLLKGI-ISLEKLKLTV 261
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 159 QARD----HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
+ARD H + E+KRREKL++RF+ L ++P + K+DK ++L+D I YL++L+ +V+ L
Sbjct: 434 EARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
Query: 215 E--EQVADKTVETAIFLKR 231
E + D + +KR
Sbjct: 494 ESCRESTDTETRGTMTMKR 512
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 159 QARDHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAISYLKQLKEQVKTLE- 215
Q +H+ ER RR ++++ +L A+LP +++ D+A+++ AI+Y+K L++ +++LE
Sbjct: 176 QRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES 235
Query: 216 -----EQVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKDILIRIHCE 270
+Q + VE A+ + D + D+ +P+IEA V + +++ CE
Sbjct: 236 QKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTC---IPKIEATVIQNHVSLKVQCE 292
Query: 271 KHHGKAVSAILVELEKHHLTV 291
K G+ + I + LEK LTV
Sbjct: 293 KKQGQLLKGI-ISLEKLKLTV 312
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 18/157 (11%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVAD-- 220
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTP 327
Query: 221 ----------KTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARV-SGKDILIRIHC 269
T +T + + + S Q P +E R+ GK + I + C
Sbjct: 328 PSSSSLHPLTPTPQTLSYRVKEELC--PSSSLPSPKGQQ--PRVEVRLREGKAVNIHMFC 383
Query: 270 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDI 306
+ G +S + L+ L VQ I F LD+
Sbjct: 384 GRRPGLLLSTMRA-LDNLGLDVQQAVISCFNGFALDV 419
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV---- 218
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 219 -ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLP-------EIEARV-SGKDILIRIHC 269
++ F + +E SLP +E R+ G+ + I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 270 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDI 306
+ G + A + L+ L VQ I F LD+
Sbjct: 428 GRRPGLLL-ATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV---- 218
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 219 -ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLP-------EIEARV-SGKDILIRIHC 269
++ F + +E SLP +E R+ G+ + I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 270 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDI 306
+ G + A + L+ L VQ I F LD+
Sbjct: 428 GRRPGLLL-ATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV---- 218
+++AER+RR+KL+ R L +V+P + KMD+A++L DAI YLK+L +++ L ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 219 -ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLP-------EIEARV-SGKDILIRIHC 269
++ F + +E SLP +E R+ G+ + I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 270 EKHHGKAVSAILVELEKHHLTVQSTSILPFGNNTLDI 306
+ G + A + L+ L VQ I F LD+
Sbjct: 428 GRRPGLLL-ATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 147 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 206
+++ T+T R++ A H L+ERKRR+++++R AL ++P K DKA++L++AI Y+K
Sbjct: 274 RVSTTSTKRSRA-AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKS 332
Query: 207 LKEQVKTL 214
L+ Q++ +
Sbjct: 333 LQLQIQMM 340
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 147 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 206
+++ T+T R++ A H L+ERKRR+++++R AL ++P K DKA++L++AI Y+K
Sbjct: 274 RVSTTSTKRSRA-AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKS 332
Query: 207 LKEQVKTL 214
L+ Q++ +
Sbjct: 333 LQLQIQMM 340
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 147 KLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQ 206
+++ T+T R++ A H L+ERKRR+++++R AL ++P K DKA++L++AI Y+K
Sbjct: 203 RVSTTSTKRSRA-AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKS 261
Query: 207 LKEQVKTL 214
L+ Q++ +
Sbjct: 262 LQLQIQMM 269
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 222
H L+ER+RR++++++ AL ++P K+DKA++L++AI YLK L+ QV+ + +
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM-------S 400
Query: 223 VETAIFLKRSVVF 235
+ + +L +V+F
Sbjct: 401 MASGYYLPPAVMF 413
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVADKT 222
H L+ER+RR++++++ AL ++P K+DKA++L++AI YLK L+ QV+ + +
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM-------S 400
Query: 223 VETAIFLKRSVVF 235
+ + +L +V+F
Sbjct: 401 MASGYYLPPAVMF 413
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 115 PKMESGFGENL---DFAAVISQGAYDDKSFLYNENKLAAT----ATIRNQVQARDHVLAE 167
P ++S E+ D +V + G D++ + ++ A T T + + +++E
Sbjct: 77 PDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISE 136
Query: 168 RKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQVA 219
R+RR ++ + AL +++P + KMDKA+++ DA+ Y+++L+ Q K L+ +A
Sbjct: 137 RRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIA 188
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
H +ERKRR+K++QR L ++P K DKA++L++ I YLKQL+ QV +
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 40/52 (76%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
H L+E++RR +++++ AL +++P K DKA++L++AI YLKQL+ QV+ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 148 LAATATIRNQVQAR------DHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAI 201
+AA R +++AR H +AER RRE++++R AL ++P K DKA++L++ I
Sbjct: 128 VAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEII 187
Query: 202 SYLKQLKEQVKTL 214
Y+K L+ QVK L
Sbjct: 188 DYVKFLQLQVKVL 200
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLE 215
+A R+RRE++S++ L ++PG KMD A++L++A +YLK L+ QVK LE
Sbjct: 280 QTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 155 RNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKK-MDKATVLEDAISYLKQLKEQVKT 213
R Q R H LAER RREK+S++ AL ++PG K + KA VL++ I+Y++ L+ QV+
Sbjct: 157 RGQATDR-HSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
Query: 214 L 214
L
Sbjct: 216 L 216
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKM-DKATVLEDAISYLKQLKEQVKTLEEQVADK 221
H LAER RREK+S+R L ++PG K+ KA +L++ I+Y++ L++QV+ L ++A
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 276
Query: 222 TVETAIFLKR 231
E I + R
Sbjct: 277 NPEINIDIDR 286
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 159 QARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEEQV 218
Q +++AER+RR++L+ R L +++P + KMD+ ++L DAI Y+K+L +++ L+++
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE- 233
Query: 219 ADKTVETAIFLKRSVVFGDDDGSFSDENSDQSL----PEIEARVSGKDILIRIHCEKHHG 274
++ + + S +FGD D N+++ L P+ E +D + I C G
Sbjct: 234 -EQELGNSNNSHHSKLFGD----LKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPG 288
Query: 275 KAVSAILVELEKHHLTVQSTSILPFGNNTL 304
+S + LE L ++ I F + +L
Sbjct: 289 LLLSTVNT-LETLGLEIEQCVISCFSDFSL 317
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 98/200 (49%), Gaps = 36/200 (18%)
Query: 147 KLAATATIRNQVQAR--DHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAIS 202
K A T+ +V+++ H+ ER RR+++++ L +++PG +++ D+A+++ AI
Sbjct: 181 KRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE 240
Query: 203 YLKQLKEQVKTLEEQVADKTV-ETA-----------------------IFLKRSVVFGDD 238
++++L++ ++ LE Q + + ET + + +V +
Sbjct: 241 FVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEG 300
Query: 239 DGSFSDENSDQ--SLPEIEARVSGKDILIRIHCEKHHGKAVSAILVELEKHHLTVQSTSI 296
G +E ++ L ++E ++ G D +I+I + G+ + I LE HL++ T+I
Sbjct: 301 GGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTI-AALEDLHLSILHTNI 359
Query: 297 LPFGNNTLDITIVTQVNILI 316
T++ T++ N+ I
Sbjct: 360 -----TTMEQTVLYSFNVKI 374
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 159 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
QA D H +AER RRE++++R +L ++P K DKA++L++ I Y+K L+ QVK L
Sbjct: 136 QATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 166 AERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLEE 216
AER+RREKL R +AL + +P + M KA+++EDAI+Y+ +L+ VK L E
Sbjct: 36 AERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLE 86
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 160 ARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
A H LAER+RREK++++ L ++P K K + L+DAI Y+K L+ Q++ +
Sbjct: 257 AEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 159 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKM-DKATVLEDAISYLKQLKEQVKTLEE 216
QA D H LAER RREK+S+R L ++PG ++ KA +L++ I+Y++ L+ QV+ L
Sbjct: 197 QATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM 256
Query: 217 QVA 219
++A
Sbjct: 257 KLA 259
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 149 AATATIRNQVQARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQL 207
A +T R + +A + H LAER+RREK+++R L ++P K K ++LED I Y+K L
Sbjct: 140 ARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSL 199
Query: 208 KEQVKTLEEQVA 219
+ Q+ +A
Sbjct: 200 EMQINQFMPHMA 211
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 159 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
QA D H +AER RRE++++R +L ++P K DKA++L++ I Y++ L+ QVK L
Sbjct: 105 QATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-128960
FORWARD LENGTH=912
Length = 912
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 139 KSFLYNENKLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLE 198
KS N + +T+T+ Q+ +A R RR ++S RF L +++PG KMD ++L+
Sbjct: 28 KSETGNTKRSRSTSTLSTDPQS----VAARDRRHRISDRFKILQSMVPGGAKMDTVSMLD 83
Query: 199 DAISYLKQLKEQV 211
+AISY+K LK Q+
Sbjct: 84 EAISYVKFLKAQI 96
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 30/199 (15%)
Query: 130 VISQGAYDDKSFLYNENKLAATATIRNQVQARDHVLAERKRREKLSQRFIALSAVLPGLK 189
V+ Q A D K+ KL T +++ ++ +ERKRRE+++Q L AV+P +
Sbjct: 241 VVVQNANDSKA----NKKLLPTENFKSK-----NLHSERKRRERINQAMYGLRAVVPKIT 291
Query: 190 KMDKATVLEDAISYLKQLKEQVKTLEEQVA--DKTVETAIFLKRSVVFGDDDGSFSDENS 247
K++K + DA+ Y+ +L + + LE+++ ++ I + D + S
Sbjct: 292 KLNKIGIFSDAVDYINELLVEKQKLEDELKGINEMECKEIAAEEQSAIADPEAERVSSKS 351
Query: 248 DQSLPEIEARV-----SGKDILIRI---HCEKHHGKAVSAI-LVELEKHHLTVQSTSILP 298
++ + + E ++ +D LIR+ H + + + A+ L ELE I+
Sbjct: 352 NKRVKKNEVKIEVHETGERDFLIRVVQEHKQDGFKRLIEAVDLCELE----------IID 401
Query: 299 FGNNTLDITIVTQVNILIN 317
LD+T++T +N+ N
Sbjct: 402 VNFTRLDLTVMTVLNVKAN 420
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 159 QARD-HVLAERKRREKLSQRFIALSAVLPGLKK-MDKATVLEDAISYLKQLKEQVKTL 214
QA D H LAER RREK+S+R L ++PG K + KA VL++ I+Y++ L+ QV+ L
Sbjct: 142 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 159 QARD-HVLAERKRREKLSQRFIALSAVLPGLKK-MDKATVLEDAISYLKQLKEQVKTL 214
QA D H LAER RREK+S+R L ++PG K + KA VL++ I+Y++ L+ QV+ L
Sbjct: 142 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
| chr4:42601-43197 REVERSE LENGTH=198
Length = 198
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 168 RKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTLE 215
R+RRE++S++ L ++PG KMD A++L++AI Y K LK QV+ L+
Sbjct: 128 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>AT4G14410.2 | Symbols: bHLH104 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:8300418-8301503
FORWARD LENGTH=277
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 167 ERKRREKLSQRFIALSAVL-PG-LKKMDKATVLEDAISYLKQLKEQVKTLEE 216
ER RREKL++RF+ LS+VL PG K DK +L+DAI L QL+++ LEE
Sbjct: 133 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE 184
>AT4G14410.1 | Symbols: bHLH104 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:8300077-8301503
FORWARD LENGTH=283
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 167 ERKRREKLSQRFIALSAVL-PG-LKKMDKATVLEDAISYLKQLKEQVKTLEE 216
ER RREKL++RF+ LS+VL PG K DK +L+DAI L QL+++ LEE
Sbjct: 139 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE 190
>AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=379
Length = 379
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 159 QARD-HVLAERKRREKLSQRFIALSAVLPGLKKMDK-ATVLEDAISYLKQLKEQVKTLEE 216
QA D H LAER RREK++ R L ++PG K+ A VL++ I++++ L+ QV+ L
Sbjct: 210 QATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSM 269
Query: 217 QVADKTVETAIFLKRSVVFGDDDGSFSD 244
++A V I + ++GS D
Sbjct: 270 RLA--AVNPRIDFNLDTILASENGSLMD 295
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVK 212
H L+ER+RR+K+++ AL +LP K D++++L+D I Y+K L+ Q++
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVK 212
H L+ER+RR+K+++ AL +LP K D++++L+D I Y+K L+ Q++
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT1G49770.1 | Symbols: RGE1, ZOU | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:18424578-18426531
FORWARD LENGTH=308
Length = 308
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 163 HVLAERKRREKLSQRFIALSAVLPGLK-KMDKATVLEDAISYLKQLKEQVKTLEEQVADK 221
H+ ER+RR+K+ F L A+LP L K DK+T++++A+S +K L++ ++ LE Q +K
Sbjct: 74 HIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEK 133
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 31/151 (20%)
Query: 159 QARDHVLAERKRREKLSQRFIALSAVLPG--LKKMDKATVLEDAISYLKQLKEQVKTLEE 216
Q H+ ER RR +++ +L +++P +++ D+A+++ AI ++K L++Q+++LE
Sbjct: 191 QRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEA 250
Query: 217 QVADKTVETAIFLKRSVVFGDDDGSFSDENSDQSLPEIEARVSGKD-------------- 262
Q KRS D+ ++NS +++ + R S K+
Sbjct: 251 Q------------KRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIE 298
Query: 263 --ILIRIHCEKHHGKAVSAILVELEKHHLTV 291
+ ++I C + G+ + +I++ LEK TV
Sbjct: 299 SHVNLKIQCTRKQGQLLRSIIL-LEKLRFTV 328
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 157 QVQARDHVLAERKRREKLSQRFIALSAVLPGLKKMDKATVLEDAISYLKQLKEQVKTL 214
+V A+ H AER+RR +++ +F L +LP L K DKA+VL + + Y +LK+ V+ +
Sbjct: 1347 EVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 1404