Miyakogusa Predicted Gene

Lj0g3v0139839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139839.1 tr|G7J4S2|G7J4S2_MEDTR GRAM domain-containing
protein 1B OS=Medicago truncatula GN=MTR_3g077000
PE=4,89.58,4e-18,C2,C2 calcium-dependent membrane targeting; no
description,NULL; OS08G0492400 PROTEIN,NULL; MCTP-REL,CUFF.8519.1
         (48 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G50170.1 | Symbols:  | C2 calcium/lipid-binding and GRAM doma...    87   3e-18
AT1G03370.1 | Symbols:  | C2 calcium/lipid-binding and GRAM doma...    73   4e-14

>AT5G50170.1 | Symbols:  | C2 calcium/lipid-binding and GRAM domain
           containing protein | chr5:20421150-20425524 FORWARD
           LENGTH=1027
          Length = 1027

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 38/48 (79%), Positives = 43/48 (89%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           +E+T L DPYVV TCNG+TR+SSVKLQ  DPQWNEV+EFDAMEEPPSV
Sbjct: 554 VEATELFDPYVVFTCNGKTRTSSVKLQAQDPQWNEVIEFDAMEEPPSV 601


>AT1G03370.1 | Symbols:  | C2 calcium/lipid-binding and GRAM domain
           containing protein | chr1:830968-834996 FORWARD
           LENGTH=1020
          Length = 1020

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 37/45 (82%)

Query: 4   TGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           +G  DPY+V T NG+TR+SS+K Q S+PQWNE+ EFDAM +PPSV
Sbjct: 553 SGHCDPYIVFTSNGKTRTSSIKFQKSNPQWNEIFEFDAMADPPSV 597