Miyakogusa Predicted Gene

Lj0g3v0139579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139579.1 Non Chatacterized Hit- tr|I3SP01|I3SP01_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.98,0,TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED,NULL;
RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM,NULL;,CUFF.8508.1
         (119 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulat...   147   2e-36
AT5G62920.1 | Symbols: ARR6 | response regulator 6 | chr5:252527...   137   1e-33
AT1G74890.1 | Symbols: ARR15 | response regulator 15 | chr1:2813...   131   8e-32
AT1G59940.1 | Symbols: ARR3 | response regulator 3 | chr1:220658...   125   5e-30
AT1G19050.1 | Symbols: ARR7 | response regulator 7 | chr1:657791...   125   5e-30
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regula...   124   1e-29
AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 | chr...   111   8e-26
AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |...   108   6e-25
AT2G40670.2 | Symbols: RR16 | response regulator 16 | chr2:16970...   107   2e-24
AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 | chr...   107   2e-24
AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 | chr3...   105   5e-24

>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulator
           5 | chr3:17759112-17760740 REVERSE LENGTH=184
          Length = 184

 Score =  147 bits (370), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 68/84 (80%), Positives = 76/84 (90%)

Query: 20  LHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVKVNLI 79
           LHVLAVDDS+VDRK IERLL++SSCKVTVVDS TRALQYLGLDGE NSS+GF+ +K+NLI
Sbjct: 25  LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84

Query: 80  MTDYSMPGMTGYELLKKIKVGVCY 103
           MTDYSMPGMTGYELLKKIK    +
Sbjct: 85  MTDYSMPGMTGYELLKKIKESSAF 108


>AT5G62920.1 | Symbols: ARR6 | response regulator 6 |
           chr5:25252745-25254158 REVERSE LENGTH=186
          Length = 186

 Score =  137 bits (345), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 74/87 (85%), Gaps = 1/87 (1%)

Query: 17  SDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVKV 76
            D LHVLAVDDS VDRK IERLL++SSCKVTVVDS TRALQYLGLD EE  S+GF+ +KV
Sbjct: 22  PDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEK-SVGFEDLKV 80

Query: 77  NLIMTDYSMPGMTGYELLKKIKVGVCY 103
           NLIMTDYSMPGMTGYELLKKIK    +
Sbjct: 81  NLIMTDYSMPGMTGYELLKKIKESSAF 107


>AT1G74890.1 | Symbols: ARR15 | response regulator 15 |
          chr1:28131590-28132710 REVERSE LENGTH=206
          Length = 206

 Score =  131 bits (330), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 72/80 (90%), Gaps = 1/80 (1%)

Query: 19 ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVKVNL 78
          ELHVLAVDDS VDRKVIERLLKIS+CKVT V+SGTRALQYLGLDG +N S G   +KVNL
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDG-DNGSSGLKDLKVNL 75

Query: 79 IMTDYSMPGMTGYELLKKIK 98
          I+TDYSMPG+TGYELLKKIK
Sbjct: 76 IVTDYSMPGLTGYELLKKIK 95


>AT1G59940.1 | Symbols: ARR3 | response regulator 3 |
           chr1:22065894-22066895 REVERSE LENGTH=231
          Length = 231

 Score =  125 bits (314), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 76/88 (86%), Gaps = 1/88 (1%)

Query: 16  DSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVK 75
           DSD++HVLAVDDSLVDR VIERLL+I+SCKVT VDSG RAL++LGLD ++ +++ FD +K
Sbjct: 29  DSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLD-DDKAAVEFDRLK 87

Query: 76  VNLIMTDYSMPGMTGYELLKKIKVGVCY 103
           V+LI+TDY MPGMTGYELLKKIK    +
Sbjct: 88  VDLIITDYCMPGMTGYELLKKIKESTSF 115


>AT1G19050.1 | Symbols: ARR7 | response regulator 7 |
           chr1:6577919-6579078 REVERSE LENGTH=206
          Length = 206

 Score =  125 bits (314), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/101 (66%), Positives = 79/101 (78%), Gaps = 8/101 (7%)

Query: 5   ATGEVFRRVLE-------DSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQ 57
           A GEV R  +         + ELHVLAVDDS+VDRKVIERLL+ISSCKVT V+SGTRALQ
Sbjct: 2   AVGEVMRMEIPAGGDLTVTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQ 61

Query: 58  YLGLDGEENSSIGFDGVKVNLIMTDYSMPGMTGYELLKKIK 98
           YLGLDG + +S     +KVNLI+TDYSMPG++GY+LLKKIK
Sbjct: 62  YLGLDGGKGAS-NLKDLKVNLIVTDYSMPGLSGYDLLKKIK 101


>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regulator
           4 | chr1:3442624-3443759 REVERSE LENGTH=259
          Length = 259

 Score =  124 bits (311), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/83 (75%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 16  DSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVK 75
           D DE+HVLAVDDSLVDR VIERLL+I+SCKVT VDSG RAL++LGLD E+ +S  FD +K
Sbjct: 30  DLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEK-ASAEFDRLK 88

Query: 76  VNLIMTDYSMPGMTGYELLKKIK 98
           V+LI+TDY MPGMTGYELLKKIK
Sbjct: 89  VDLIITDYCMPGMTGYELLKKIK 111


>AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 |
          chr3:20905480-20906368 FORWARD LENGTH=153
          Length = 153

 Score =  111 bits (278), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 68/81 (83%)

Query: 18 DELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVKVN 77
          +ELHVLAVDD+L+DRK++ER+LKISSCKVT  ++G RAL+YLGL   + +    + +KVN
Sbjct: 18 EELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVN 77

Query: 78 LIMTDYSMPGMTGYELLKKIK 98
          LI+TDY MPGMTG+ELLKK+K
Sbjct: 78 LIITDYCMPGMTGFELLKKVK 98


>AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |
           chr2:17222280-17223536 FORWARD LENGTH=225
          Length = 225

 Score =  108 bits (271), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%), Gaps = 7/98 (7%)

Query: 13  VLEDSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEEN------ 66
           V+E   + HVLAVDDSL DRK+IERLL+ SSC+VT VDSG++AL++LGL  ++N      
Sbjct: 2   VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61

Query: 67  -SSIGFDGVKVNLIMTDYSMPGMTGYELLKKIKVGVCY 103
            S      V++NLI+TDY MPGMTGY+LLKK+K    +
Sbjct: 62  TSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAF 99


>AT2G40670.2 | Symbols: RR16 | response regulator 16 |
           chr2:16970258-16971120 FORWARD LENGTH=165
          Length = 165

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 69/84 (82%), Gaps = 4/84 (4%)

Query: 18  DELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSI---GFDGV 74
           +ELHVLAVDD+L+DRK++ERLLKIS CKVT  ++  RAL+YLGL G++N  I     + +
Sbjct: 27  EELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL-GDQNQHIDALTCNVM 85

Query: 75  KVNLIMTDYSMPGMTGYELLKKIK 98
           KV+LI+TDY MPGMTG+ELLKK+K
Sbjct: 86  KVSLIITDYCMPGMTGFELLKKVK 109


>AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 |
           chr2:16970258-16971120 FORWARD LENGTH=164
          Length = 164

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 69/84 (82%), Gaps = 4/84 (4%)

Query: 18  DELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSI---GFDGV 74
           +ELHVLAVDD+L+DRK++ERLLKIS CKVT  ++  RAL+YLGL G++N  I     + +
Sbjct: 27  EELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL-GDQNQHIDALTCNVM 85

Query: 75  KVNLIMTDYSMPGMTGYELLKKIK 98
           KV+LI+TDY MPGMTG+ELLKK+K
Sbjct: 86  KVSLIITDYCMPGMTGFELLKKVK 109


>AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 |
           chr3:21110059-21111228 FORWARD LENGTH=234
          Length = 234

 Score =  105 bits (263), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 9/94 (9%)

Query: 19  ELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSS---------I 69
           + HVLAVDDSL DRK+IERLL+ SSC+VT VDSG++AL++LGL    +S+         +
Sbjct: 8   QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPV 67

Query: 70  GFDGVKVNLIMTDYSMPGMTGYELLKKIKVGVCY 103
               V+VNLI+TDY MPGMTGY+LLKK+K    +
Sbjct: 68  NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAF 101