Miyakogusa Predicted Gene

Lj0g3v0139109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139109.1 tr|I3SBU4|I3SBU4_LOTJA ER lumen protein retaining
receptor OS=Lotus japonicus PE=2 SV=1,99.29,0,ER LUMEN PROTEIN
RETAINING RECEPTOR,ER lumen protein retaining receptor;
ER_LUMEN_RECEPTOR_1,ER lume,CUFF.8491.1
         (141 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25040.1 | Symbols: ERD2B | endoplasmic reticulum retention d...   226   4e-60
AT1G29330.1 | Symbols: ATERD2, AERD2, ERD2 | ER lumen protein re...   204   2e-53
AT4G38790.1 | Symbols:  | ER lumen protein retaining receptor fa...    70   4e-13
AT3G25160.1 | Symbols:  | ER lumen protein retaining receptor fa...    70   5e-13
AT1G19970.1 | Symbols:  | ER lumen protein retaining receptor fa...    69   1e-12
AT2G21190.1 | Symbols:  | ER lumen protein retaining receptor fa...    68   2e-12
AT1G75760.1 | Symbols:  | ER lumen protein retaining receptor fa...    62   1e-10

>AT3G25040.1 | Symbols: ERD2B | endoplasmic reticulum retention
           defective 2B | chr3:9124479-9126051 FORWARD LENGTH=215
          Length = 215

 Score =  226 bits (576), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 124/141 (87%)

Query: 1   MNIFRLSGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTSYISLYN 60
           MNIFRL+GDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYA+VFATRYLDIFTS++SLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFATRYLDIFTSFVSLYN 60

Query: 61  TTMKLIFLGSSFSIVWYMRHHKIVRRSYDKDQDTFRHYFXXXXXXXXXXXXNEKFTFKEV 120
           T+MKL+FLGSSFSIVWYM++HK V R+YD++QDTFRH+F            +EKFTF EV
Sbjct: 61  TSMKLVFLGSSFSIVWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEV 120

Query: 121 MWAFSLYLEAVAILPQLVLLQ 141
           +W  SLYLEAVAILPQLVLLQ
Sbjct: 121 LWTSSLYLEAVAILPQLVLLQ 141


>AT1G29330.1 | Symbols: ATERD2, AERD2, ERD2 | ER lumen protein
           retaining receptor family protein |
           chr1:10258580-10260906 REVERSE LENGTH=215
          Length = 215

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 97/141 (68%), Positives = 113/141 (80%)

Query: 1   MNIFRLSGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTSYISLYN 60
           MNIFR +GDM+HL SVL+LLLKI+  KSCAG+SLKTQELYALVF TRYLD+FT Y+SLYN
Sbjct: 1   MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN 60

Query: 61  TTMKLIFLGSSFSIVWYMRHHKIVRRSYDKDQDTFRHYFXXXXXXXXXXXXNEKFTFKEV 120
           + MK++F+ SS +IVW MR H +VRRSYDKD DTFRH +            NEKFT +EV
Sbjct: 61  SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFTVQEV 120

Query: 121 MWAFSLYLEAVAILPQLVLLQ 141
            WAFS+YLEAVAILPQLVLLQ
Sbjct: 121 FWAFSIYLEAVAILPQLVLLQ 141


>AT4G38790.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr4:18111426-18112977 FORWARD
           LENGTH=273
          Length = 273

 Score = 70.1 bits (170), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 11/145 (7%)

Query: 2   NIFRLSGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTSYISLYN- 60
           N+F ++ +  H   + VL+ K+   K+CAG+SLK+QEL A+  A R   ++ S +  Y+ 
Sbjct: 48  NLF-VAAEAVHSIGICVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSIVMEYDI 103

Query: 61  -TTMKLIFLGSSFSIVWYMRHHKIVRRSYDKDQDTFRHYFXXXXXXXXXXXXNEKFT--- 116
            T + L  LG++  +++ +R    +R SY +D+D F  Y+            +   +   
Sbjct: 104 HTILDLATLGTTLWVIFMIRFK--LRASYMEDKDNFPLYYVLAPCVALAVFIHPSTSHNI 161

Query: 117 FKEVMWAFSLYLEAVAILPQLVLLQ 141
              + WA  +YLEAV++LPQL ++Q
Sbjct: 162 INRISWALCVYLEAVSVLPQLRVMQ 186


>AT3G25160.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr3:9160337-9162023 REVERSE LENGTH=272
          Length = 272

 Score = 69.7 bits (169), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 10/145 (6%)

Query: 2   NIFRLSGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTSYISLYNT 61
           N F ++ ++ H A +L+L+ K+   K+C+G+SLK+QE+ A+  A R +      I++   
Sbjct: 48  NHFFIASELIHAAGILILIYKLTRQKTCSGLSLKSQEVTAIFLAVRLI----CSINMEGD 103

Query: 62  TMKLIFLGSSFSIVW--YMRHHKIVRRSYDKDQDTFRHYFXXXXXXXXXXXXNEKFT--- 116
              ++   +  S +W  YM  +K+ + SY K  DT  +Y+            N   +   
Sbjct: 104 IHTVLDFATLVSTLWVIYMIRYKL-KASYIKSLDTCYNYYVLVPSAILALIINPSTSYSY 162

Query: 117 FKEVMWAFSLYLEAVAILPQLVLLQ 141
           F  ++WAF +Y E+V++LPQL L+Q
Sbjct: 163 FHRILWAFCVYTESVSVLPQLRLMQ 187


>AT1G19970.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr1:6931194-6932597 REVERSE LENGTH=272
          Length = 272

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 15/147 (10%)

Query: 2   NIFRLSGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTSYISLYNT 61
           N+F ++ +  H   + VL+ K+   K+CAG+SLKTQEL AL  A R    F     L+  
Sbjct: 47  NLF-VASEAVHAVGIAVLIYKLTKEKTCAGISLKTQELTALFLAVRLYCSFVMEFDLHT- 104

Query: 62  TMKLIFLGSS--FSIVW--YMRHHKIVRRSYDKDQDTFRHYFXXXXXXXXXXXXNEK--- 114
                FL S+   + +W  YM   K+ R +Y +D+D F  YF            +     
Sbjct: 105 -----FLDSATLVTTLWVVYMIRFKL-RPTYMEDKDNFAIYFVVIPCAVLSFFIHPSTRH 158

Query: 115 FTFKEVMWAFSLYLEAVAILPQLVLLQ 141
                + WAF +YLEAV++LPQL ++Q
Sbjct: 159 HIINRISWAFCVYLEAVSVLPQLRVMQ 185


>AT2G21190.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr2:9080916-9082642 FORWARD LENGTH=269
          Length = 269

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 81/145 (55%), Gaps = 11/145 (7%)

Query: 2   NIFRLSGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTSYISLYN- 60
           N+F ++ +  H   + VL+ K+   K+CAG+SLK+QEL A+  A R   ++ S++  Y+ 
Sbjct: 44  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 99

Query: 61  -TTMKLIFLGSSFSIVWYMRHHKIVRRSYDKDQDTFRHYFXXXXXXXXXXXXNEKFT--- 116
            T + L  LG++  +++ +R +  ++ +Y +++D F  Y+            +   +   
Sbjct: 100 HTILDLATLGTTLWVIYMIRFN--LKTTYMEEKDNFALYYVLAPCVVLAVWIHPSTSHNI 157

Query: 117 FKEVMWAFSLYLEAVAILPQLVLLQ 141
              + W F +YLEAV++LPQL ++Q
Sbjct: 158 LNRISWGFCVYLEAVSVLPQLRVMQ 182


>AT1G75760.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr1:28446940-28448421 REVERSE
           LENGTH=272
          Length = 272

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 11/145 (7%)

Query: 2   NIFRLSGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTSYISLYN- 60
           N+F ++ +  H   + VL+ K+   ++CAG+SLK+QEL AL  A R   ++ S++  ++ 
Sbjct: 47  NLF-VAAEAVHSLGISVLIYKLTKERTCAGLSLKSQELTALFLAVR---LYCSFVMEFDI 102

Query: 61  -TTMKLIFLGSSFSIVWYMRHHKIVRRSYDKDQDTFRHYFXXXXXXXXXXXXNEK---FT 116
            T +    L ++  +++ +R    ++ SY  D+D F  Y+            +       
Sbjct: 103 HTLLDSATLVTTLFVIYMIRFK--LKASYMDDKDNFAIYYVVIPCVVLSVLIHPSTHHHI 160

Query: 117 FKEVMWAFSLYLEAVAILPQLVLLQ 141
             ++ WAF +YLEAV++LPQL ++Q
Sbjct: 161 INKISWAFCVYLEAVSVLPQLRVMQ 185