Miyakogusa Predicted Gene
- Lj0g3v0138979.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0138979.1 tr|G7JY71|G7JY71_MEDTR Receptor kinase-like
protein OS=Medicago truncatula GN=MTR_5g047330 PE=4
SV=1,44.34,1e-18,no description,NULL; LRRNT_2,Leucine-rich
repeat-containing N-terminal, type 2,CUFF.8446.1
(108 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34930.1 | Symbols: | disease resistance family protein / LR... 50 3e-07
AT1G33610.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 50 4e-07
AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein 12... 49 7e-07
AT5G23400.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 48 1e-06
AT3G12610.1 | Symbols: DRT100 | Leucine-rich repeat (LRR) family... 46 6e-06
AT1G47890.1 | Symbols: AtRLP7, RLP7 | receptor like protein 7 | ... 46 6e-06
AT2G25470.1 | Symbols: AtRLP21, RLP21 | receptor like protein 21... 45 7e-06
AT2G25790.1 | Symbols: | Leucine-rich receptor-like protein kin... 45 9e-06
>AT2G34930.1 | Symbols: | disease resistance family protein / LRR
family protein | chr2:14737169-14739886 REVERSE
LENGTH=905
Length = 905
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 39 KCHEREKQSLLNFKQSLLDNFGMLSTWRDDGDNKDCCQWRGIVCNNETGHVMMLDL 94
KC E+Q+LL F+ +L D L +W DCC W G++C+ T HV+ +DL
Sbjct: 32 KCISTERQALLTFRAALTDLSSRLFSW----SGPDCCNWPGVLCDARTSHVVKIDL 83
>AT1G33610.1 | Symbols: | Leucine-rich repeat (LRR) family
protein | chr1:12188910-12190346 FORWARD LENGTH=478
Length = 478
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 15 LFLYTEVSVLGFNQVNQLTKSSYVKCHEREKQSLLNFKQSLL-DNFGMLSTWRDDGDNKD 73
LF++ SV+ F Q L+ + CH ++ LL FK + D GMLS+W+
Sbjct: 8 LFIF---SVITFLQC--LSSTGAATCHPDDEAGLLAFKSGITQDPSGMLSSWKK---GTS 59
Query: 74 CCQWRGIVCNNETGHVMMLDLHG 96
CC W+GI+C N + V ML+L G
Sbjct: 60 CCSWKGIICFN-SDRVTMLELVG 81
>AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein 12 |
chr1:26909905-26912448 FORWARD LENGTH=847
Length = 847
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 29 VNQLTKSSYVKCHEREKQSLLNFKQSLLDN--FGMLSTWRDD-GDNKDCCQWRGIVCNNE 85
V+ L SS C + ++ +LL F+ N + +++ WR + DCC W G+ CN++
Sbjct: 23 VHSLASSSPHFCRDDQRDALLEFRGEFPINASWHIMNQWRGPWNKSTDCCLWNGVTCNDK 82
Query: 86 TGHVMMLDLHGDWDAQYLSTD 106
+G V+ LD+ + YL T+
Sbjct: 83 SGQVISLDIPNTFLNNYLKTN 103
>AT5G23400.1 | Symbols: | Leucine-rich repeat (LRR) family
protein | chr5:7880603-7882372 FORWARD LENGTH=589
Length = 589
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 12 ILMLFLYTEVSVLGFNQVNQLTKSSYVKCHEREKQSLLNFKQSLL-DNFGMLSTWRDDGD 70
+LM L+ V F L+ S V C +++ +LL FK S++ D G+L +W
Sbjct: 7 VLMNLLFVSALVRNF----VLSSSQQVICSSQDRATLLGFKSSIIEDTTGVLDSWV---- 58
Query: 71 NKDCCQ--WRGIVCNNETGHVMMLDLH 95
KDCC W G+ CN TG V L L
Sbjct: 59 GKDCCNGDWEGVQCNPATGKVTGLVLQ 85
>AT3G12610.1 | Symbols: DRT100 | Leucine-rich repeat (LRR) family
protein | chr3:4006661-4007779 REVERSE LENGTH=372
Length = 372
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 40 CHEREKQSLLNFKQSLLD-NFGMLSTWRDDGDNKDCC-QWRGIVCNNETGHVMMLDLHGD 97
C +++ +L FK SL + N G+ +TW +N DCC +W GI C+ ++G V + L G+
Sbjct: 27 CSPKDQTALNAFKSSLSEPNLGIFNTW---SENTDCCKEWYGISCDPDSGRVTDISLRGE 83
>AT1G47890.1 | Symbols: AtRLP7, RLP7 | receptor like protein 7 |
chr1:17643976-17647035 FORWARD LENGTH=1019
Length = 1019
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 9/57 (15%)
Query: 40 CHEREKQSLLNFKQSLLDNFGML--STWRDDGDNKDCCQWRGIVCNNETGHVMMLDL 94
CH +K +LL+FK + FGM+ +W + DCC W GI C+ ++G+V+ LDL
Sbjct: 74 CHSDQKDALLDFK----NEFGMVDSKSWVNK---SDCCSWDGITCDAKSGNVIGLDL 123
>AT2G25470.1 | Symbols: AtRLP21, RLP21 | receptor like protein 21
| chr2:10838420-10841881 FORWARD LENGTH=935
Length = 935
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 38 VKCHEREKQSLLNFKQSLLDNFG------MLSTWRDDGDNKDCCQWRGIVCNNETGHVMM 91
C E+E+++LL K+ L+ +L TW +D DCCQW GI CN +G V+
Sbjct: 11 TSCIEKEREALLELKKYLMSRSRESGLDYVLPTWTND-TKSDCCQWDGIKCNRTSGRVIE 69
Query: 92 LDLHGD 97
L + GD
Sbjct: 70 LSV-GD 74
>AT2G25790.1 | Symbols: | Leucine-rich receptor-like protein
kinase family protein | chr2:11000631-11004031 FORWARD
LENGTH=960
Length = 960
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 41 HEREKQSLLNFKQSLLDNFGMLSTWRDDGDNKDCCQWRGIVCNNETGHVMMLDLHG 96
H E + LL+FK S+ D LS+W N D C W G+VCNN V+ LDL G
Sbjct: 28 HANELELLLSFKSSIQDPLKHLSSWSYSSTN-DVCLWSGVVCNN-ISRVVSLDLSG 81