Miyakogusa Predicted Gene

Lj0g3v0138589.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0138589.1 Non Chatacterized Hit- tr|A9P121|A9P121_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,53.03,0.00000000000002,EF_HAND_1,EF-Hand 1, calcium-binding site; no
description,EF-hand-like domain; EF_hand_3,EF-hand-lik,CUFF.8425.1
         (88 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44310.1 | Symbols:  | Calcium-binding EF-hand family protein...   108   7e-25

>AT2G44310.1 | Symbols:  | Calcium-binding EF-hand family protein
          | chr2:18309285-18309713 FORWARD LENGTH=142
          Length = 142

 Score =  108 bits (270), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 58/65 (89%)

Query: 1  MGVVIIDGTTVRDFVNDEASFTKSVDEQFAALDLNNDGVLSRAELRTAFESMRLIEAHFG 60
          MGVV+IDG+TVR FV+DE  F KSVDE+FAALDLN DGVLSR+ELR AFESMRL+E+HFG
Sbjct: 1  MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61 IDVAT 65
          +DV T
Sbjct: 61 VDVVT 65