Miyakogusa Predicted Gene

Lj0g3v0138369.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0138369.1 Non Chatacterized Hit- tr|F0WVG9|F0WVG9_9STRA
Putative uncharacterized protein AlNc14C296G10304
OS=A,28.48,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; ZINC FINGER HIT
DOMAIN CONTAINING PROTEIN 2 (PROTEIN FON)-RELATE,CUFF.8414.1
         (347 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63830.1 | Symbols:  | HIT-type Zinc finger family protein | ...   276   1e-74

>AT5G63830.1 | Symbols:  | HIT-type Zinc finger family protein |
           chr5:25543585-25544802 REVERSE LENGTH=405
          Length = 405

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 151/328 (46%), Positives = 196/328 (59%), Gaps = 15/328 (4%)

Query: 1   MKENVVQELQQMQPDEQAKHKMLDILKRFHXXXXXXXXXXXXXXXXXXXXX---TMEKIL 57
           M++NV  EL+Q++ D+Q K KML+ILKRFH                         ++KI+
Sbjct: 63  MRDNVNDELKQVRSDDQTKRKMLEILKRFHEEEEEDDGGIDSITDDEGLSLPEEIIQKIM 122

Query: 58  SGQAISFDDLSLEEKKRFHRAIACGELSKMIKPWEPWWTTPSARKIRLSKDGTQLVQPLX 117
           +G  +S DDLSLEE+K F RA+A GELSKMI+PW+PWW   SAR I L   GTQLVQ + 
Sbjct: 123 NGDEVSLDDLSLEERKGFQRALASGELSKMIQPWDPWWLLASARTINLGLGGTQLVQCV- 181

Query: 118 XXXXXXXXXXXXXXXIXXXXXXXXXXLNKLSSKEPSPLLTVHLVDILYSYCFTLRVYNGD 177
                          I          L+KL+S  PSPLL +HL+DI YSYCFTLR+YNG+
Sbjct: 182 ----EDEEETTVVSEIPRGPDTPLISLSKLTSTNPSPLLPIHLIDIAYSYCFTLRIYNGE 237

Query: 178 WRSDPXXXXXXXXXXXXXXXRCEQPETVMEALSHCLEQTCSPAYRHM-GGLQFGLGVVDD 236
           W+SD                   QPET+ E LS CLEQTCS AY+++ GGL+FGL +VDD
Sbjct: 238 WQSDSLGAATMVLTVSSVLGHNGQPETIKEVLSFCLEQTCSSAYKNLGGGLKFGLNLVDD 297

Query: 237 VISLLALGSSALVCALCDMRRLVQEGGKENKSERRPRRLRKDEIRSAIKMAERKIYFIMC 296
           VI  L+LGS A+VC L D++RL+    KE KS    R L+K      +K+AERK++++MC
Sbjct: 298 VICFLSLGSGAMVCLLGDLQRLILGAIKEVKSS-SGRDLKK-----KLKLAERKVFYMMC 351

Query: 297 WVHEQPEEAWSSLAAIVGAEKVSAVEFH 324
           WV+EQ  E W +L   V AEK S VE +
Sbjct: 352 WVNEQNSEVWEALEPSVRAEKNSVVELN 379