Miyakogusa Predicted Gene
- Lj0g3v0136749.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0136749.1 Non Chatacterized Hit- tr|C5Y9U4|C5Y9U4_SORBI
Putative uncharacterized protein Sb06g018950
OS=Sorghu,43.02,6e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; ArsA_ATPase,Anion-transporting ATPase-lik,CUFF.8364.1
(238 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10350.1 | Symbols: | P-loop containing nucleoside triphosph... 272 1e-73
AT3G10350.2 | Symbols: | P-loop containing nucleoside triphosph... 230 7e-61
AT5G60730.1 | Symbols: | Anion-transporting ATPase | chr5:24422... 204 4e-53
AT1G01910.3 | Symbols: | P-loop containing nucleoside triphosph... 65 5e-11
AT1G01910.4 | Symbols: | P-loop containing nucleoside triphosph... 65 5e-11
AT1G01910.2 | Symbols: | P-loop containing nucleoside triphosph... 65 5e-11
AT1G01910.1 | Symbols: | P-loop containing nucleoside triphosph... 65 5e-11
>AT3G10350.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:3208310-3210678
FORWARD LENGTH=411
Length = 411
Score = 272 bits (696), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/180 (79%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Query: 58 LQVRLVAAPAEAVAGFDDMVSGTERXXXXXXXXXXXXXTSCASSLAVKFANNGHPTLVVS 117
LQV+ VA+P E ++ FD+MVSGT+R TSCA+SLAV+FANNGHPTLVVS
Sbjct: 63 LQVKSVASPTETISEFDEMVSGTKRKYYMLGGKGGVGKTSCAASLAVRFANNGHPTLVVS 122
Query: 118 TDPAHSLSDSFAQDLTGGLLVPVEGPDSPLFALEINPEKAREEFRNAAKTNGGSGGVKDF 177
TDPAHSLSDSFAQDLTGG+LVPVEGP++PLFALEINPEKAREEFR+A++ NGG+ GVKDF
Sbjct: 123 TDPAHSLSDSFAQDLTGGMLVPVEGPEAPLFALEINPEKAREEFRSASQMNGGT-GVKDF 181
Query: 178 MDGMGLGMIVDQLGELKLGELLDTPPPGLDEAIAISKVIQFLESPEYSMFTRIVFDTAPT 237
MDGMGLGM+V+QLGELKLGELLDTPPPGLDEAIAISKVIQFLESPEY+MFTRIVFDTAPT
Sbjct: 182 MDGMGLGMLVEQLGELKLGELLDTPPPGLDEAIAISKVIQFLESPEYNMFTRIVFDTAPT 241
>AT3G10350.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:3208310-3210678
FORWARD LENGTH=433
Length = 433
Score = 230 bits (586), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 150/180 (83%), Gaps = 10/180 (5%)
Query: 58 LQVRLVAAPAEAVAGFDDMVSGTERXXXXXXXXXXXXXTSCASSLAVKFANNGHPTLVVS 117
+ V+ VA+P E ++ FD+MVSGT+R TSCA+SLAV+FANNGHPTLVVS
Sbjct: 94 VSVKSVASPTETISEFDEMVSGTKRKYYMLGGKGGVGKTSCAASLAVRFANNGHPTLVVS 153
Query: 118 TDPAHSLSDSFAQDLTGGLLVPVEGPDSPLFALEINPEKAREEFRNAAKTNGGSGGVKDF 177
TDPAHSLSDSFAQDLTGG+LVPVEGP++PLFALEINPEKAREEFR+A++ NGG+ GVKDF
Sbjct: 154 TDPAHSLSDSFAQDLTGGMLVPVEGPEAPLFALEINPEKAREEFRSASQMNGGT-GVKDF 212
Query: 178 MDGMGLGMIVDQLGELKLGELLDTPPPGLDEAIAISKVIQFLESPEYSMFTRIVFDTAPT 237
MDGMGLGM+V+QLGELKLGELLDTPPPGLDEAIAISK +F YS+ IVFDTAPT
Sbjct: 213 MDGMGLGMLVEQLGELKLGELLDTPPPGLDEAIAISK--EFC----YSI---IVFDTAPT 263
>AT5G60730.1 | Symbols: | Anion-transporting ATPase |
chr5:24422838-24425352 FORWARD LENGTH=391
Length = 391
Score = 204 bits (519), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 143/222 (64%), Gaps = 7/222 (3%)
Query: 19 AMAIKGVLSFAPSSPPLLHLPQNFTFVSFRAS---PKPPTKPLQVRLVAAPAEAVAGFDD 75
A+ + +S + SS L + F SF A + +VR +A AE + F++
Sbjct: 3 ALLLLNRVSRSTSSISLHRVAGTLGFNSFNAQIHGDRISGTLFRVRSLATLAEGASHFNE 62
Query: 76 MVSGTERXXXXXXXXXXXXXTSCASSLAVKFANNGHPTLVVSTDPAHSLSDSFAQDLTGG 135
MVS +R TSCA+SLAVKFA++GHPT+VVSTDPAHSLSDSF+QDL+GG
Sbjct: 63 MVSVNQRKYYLLGGKGGVGKTSCAASLAVKFASHGHPTIVVSTDPAHSLSDSFSQDLSGG 122
Query: 136 LLVPVEGPDSPLFALEINPEKAREEFRNAAKTNGGSGGVKDFMDGMGLGMIVDQLGELKL 195
+L PV+G DSPL ALEI PE ++E K G VK+ MD MGLGM +LG+L L
Sbjct: 123 VLKPVQGVDSPLLALEITPEIMKDEI----KRQTGDKSVKNMMDSMGLGMFAGELGDLNL 178
Query: 196 GELLDTPPPGLDEAIAISKVIQFLESPEYSMFTRIVFDTAPT 237
++L+ PG+DE AISKV+QF+E+PEYS FTRIVFDTAPT
Sbjct: 179 EDMLNAASPGIDEIAAISKVLQFMEAPEYSRFTRIVFDTAPT 220
>AT1G01910.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313746-315831
REVERSE LENGTH=303
Length = 303
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 30/140 (21%)
Query: 98 CASSLAVKFANNGHPTLVVSTDPAHSLSDSFAQDLTGGLLVPVEGPDSPLFALEINPEKA 157
C+S LA+ A+ L++STDPAH+LSD+F Q T + V+G S LFA+E++P
Sbjct: 35 CSSILAICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTL-VQGF-SNLFAMEVDPTV- 91
Query: 158 REEFRNAAKTNGGSGGVKDFMDGMGLGMIVDQLGELKLGELLDTPPPGLDEAIAISKVIQ 217
E + A T+G G D + + PG+DEA++ +++++
Sbjct: 92 --ETDDMAGTDGMDGLFSDLANAI----------------------PGIDEAMSFAEMLK 127
Query: 218 FLESPEYSMFTRIVFDTAPT 237
+++ +Y+ IVFDTAPT
Sbjct: 128 LVQTMDYA---TIVFDTAPT 144
>AT1G01910.4 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313595-315831
REVERSE LENGTH=353
Length = 353
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 30/140 (21%)
Query: 98 CASSLAVKFANNGHPTLVVSTDPAHSLSDSFAQDLTGGLLVPVEGPDSPLFALEINPEKA 157
C+S LA+ A+ L++STDPAH+LSD+F Q T + V+G S LFA+E++P
Sbjct: 35 CSSILAICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTL-VQGF-SNLFAMEVDPTV- 91
Query: 158 REEFRNAAKTNGGSGGVKDFMDGMGLGMIVDQLGELKLGELLDTPPPGLDEAIAISKVIQ 217
E + A T+G G D + + PG+DEA++ +++++
Sbjct: 92 --ETDDMAGTDGMDGLFSDLANAI----------------------PGIDEAMSFAEMLK 127
Query: 218 FLESPEYSMFTRIVFDTAPT 237
+++ +Y+ IVFDTAPT
Sbjct: 128 LVQTMDYAT---IVFDTAPT 144
>AT1G01910.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313595-315831
REVERSE LENGTH=353
Length = 353
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 30/140 (21%)
Query: 98 CASSLAVKFANNGHPTLVVSTDPAHSLSDSFAQDLTGGLLVPVEGPDSPLFALEINPEKA 157
C+S LA+ A+ L++STDPAH+LSD+F Q T + V+G S LFA+E++P
Sbjct: 35 CSSILAICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTL-VQGF-SNLFAMEVDPTV- 91
Query: 158 REEFRNAAKTNGGSGGVKDFMDGMGLGMIVDQLGELKLGELLDTPPPGLDEAIAISKVIQ 217
E + A T+G G D + + PG+DEA++ +++++
Sbjct: 92 --ETDDMAGTDGMDGLFSDLANAI----------------------PGIDEAMSFAEMLK 127
Query: 218 FLESPEYSMFTRIVFDTAPT 237
+++ +Y+ IVFDTAPT
Sbjct: 128 LVQTMDYAT---IVFDTAPT 144
>AT1G01910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313595-315831
REVERSE LENGTH=353
Length = 353
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 30/140 (21%)
Query: 98 CASSLAVKFANNGHPTLVVSTDPAHSLSDSFAQDLTGGLLVPVEGPDSPLFALEINPEKA 157
C+S LA+ A+ L++STDPAH+LSD+F Q T + V+G S LFA+E++P
Sbjct: 35 CSSILAICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTL-VQGF-SNLFAMEVDPTV- 91
Query: 158 REEFRNAAKTNGGSGGVKDFMDGMGLGMIVDQLGELKLGELLDTPPPGLDEAIAISKVIQ 217
E + A T+G G D + + PG+DEA++ +++++
Sbjct: 92 --ETDDMAGTDGMDGLFSDLANAI----------------------PGIDEAMSFAEMLK 127
Query: 218 FLESPEYSMFTRIVFDTAPT 237
+++ +Y+ IVFDTAPT
Sbjct: 128 LVQTMDYAT---IVFDTAPT 144