Miyakogusa Predicted Gene

Lj0g3v0136489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0136489.1 NODE_39494_length_95_cov_1656.789429.path1.1
         (49 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79550.2 | Symbols: PGK | phosphoglycerate kinase | chr1:2992...    89   5e-19
AT1G79550.1 | Symbols: PGK | phosphoglycerate kinase | chr1:2992...    89   5e-19
AT1G56190.1 | Symbols:  | Phosphoglycerate kinase family protein...    78   1e-15
AT1G56190.2 | Symbols:  | Phosphoglycerate kinase family protein...    77   2e-15
AT3G12780.1 | Symbols: PGK1 | phosphoglycerate kinase 1 | chr3:4...    77   3e-15

>AT1G79550.2 | Symbols: PGK | phosphoglycerate kinase |
           chr1:29924347-29926295 REVERSE LENGTH=401
          Length = 401

 Score = 89.4 bits (220), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 47/49 (95%)

Query: 1   MGVFEFDKFAVGTETIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK 49
           MGVFEFDKFA GTE +AK+LAELSGKGVTTIIGGGDSVAAVEKVGLADK
Sbjct: 324 MGVFEFDKFAAGTEAVAKQLAELSGKGVTTIIGGGDSVAAVEKVGLADK 372


>AT1G79550.1 | Symbols: PGK | phosphoglycerate kinase |
           chr1:29924347-29926295 REVERSE LENGTH=401
          Length = 401

 Score = 89.4 bits (220), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 47/49 (95%)

Query: 1   MGVFEFDKFAVGTETIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK 49
           MGVFEFDKFA GTE +AK+LAELSGKGVTTIIGGGDSVAAVEKVGLADK
Sbjct: 324 MGVFEFDKFAAGTEAVAKQLAELSGKGVTTIIGGGDSVAAVEKVGLADK 372


>AT1G56190.1 | Symbols:  | Phosphoglycerate kinase family protein |
           chr1:21028403-21030454 FORWARD LENGTH=478
          Length = 478

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 43/47 (91%)

Query: 1   MGVFEFDKFAVGTETIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLA 47
           MGVFEF+KFA GTE +A KLAELS KGVTTIIGGGDSVAAVEKVG+A
Sbjct: 396 MGVFEFEKFAKGTEAVANKLAELSKKGVTTIIGGGDSVAAVEKVGVA 442


>AT1G56190.2 | Symbols:  | Phosphoglycerate kinase family protein |
           chr1:21028622-21030454 FORWARD LENGTH=405
          Length = 405

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 43/47 (91%)

Query: 1   MGVFEFDKFAVGTETIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLA 47
           MGVFEF+KFA GTE +A KLAELS KGVTTIIGGGDSVAAVEKVG+A
Sbjct: 323 MGVFEFEKFAKGTEAVANKLAELSKKGVTTIIGGGDSVAAVEKVGVA 369


>AT3G12780.1 | Symbols: PGK1 | phosphoglycerate kinase 1 |
           chr3:4061127-4063140 REVERSE LENGTH=481
          Length = 481

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 42/47 (89%)

Query: 1   MGVFEFDKFAVGTETIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLA 47
           MGVFE +KFA GTE IA KLAELS KGVTTIIGGGDSVAAVEKVG+A
Sbjct: 399 MGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAVEKVGVA 445