Miyakogusa Predicted Gene

Lj0g3v0135869.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0135869.2 tr|Q55FT6|Q55FT6_DICDI DENN domain-containing
protein OS=Dictyostelium discoideum GN=DDB_0202195
PE=,38.46,1e-18,DENN,DENN domain; seg,NULL; UDENN,uDENN domain;
SUPPRESSION OF TUMORIGENICITY 5 (ST5),NULL,CUFF.8327.2
         (285 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   245   3e-65
AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   141   4e-34

>AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr2:8767082-8772271 FORWARD LENGTH=1029
          Length = 1029

 Score =  245 bits (625), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 119/180 (66%), Positives = 140/180 (77%), Gaps = 5/180 (2%)

Query: 2   KDLASFCFPEGVKAWLLERTPSFSELNELVYGQEHLGRDDLSFVFTLKAVDNTTLYGVCL 61
           KDLA+FCFP GVKA LLERTPS S+LNELVYGQEHLG DD SF+F+ K  D+ TLYGVCL
Sbjct: 416 KDLATFCFPGGVKARLLERTPSLSDLNELVYGQEHLGTDDSSFIFSFKVADDATLYGVCL 475

Query: 62  HVPEIVQRPPGILGISSP--HSLVSSRFMVSAPRCYCLLTRVPFFELHFEMLNSLIAQER 119
           HV EIVQRPPG+L  +SP   S   SRF+VSAPRCYCLLTRVPFFELHFEMLNS+IAQER
Sbjct: 476 HVSEIVQRPPGVLSTASPLHSSGGGSRFLVSAPRCYCLLTRVPFFELHFEMLNSMIAQER 535

Query: 120 LNRITEFINEISLTSC--LPPSPKLDDQMSSNANSPDRQSFSDWMSCAIPLDGAAVITTV 177
           L RITEF++E+SL +   LP   + +DQ+ S  +SP R +  DWM+ AIP+DG   +T  
Sbjct: 536 LKRITEFVSEMSLAAACYLPSISRRNDQIDSRVSSP-RSNPDDWMASAIPVDGVMALTAA 594


>AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr5:13742458-13747464 REVERSE LENGTH=765
          Length = 765

 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/162 (46%), Positives = 104/162 (64%), Gaps = 7/162 (4%)

Query: 2   KDLASFCFPEGVKAWLLERTPSFSELNELVYGQEHLGRDDLSFVFTLKAVDNTTLYGVCL 61
           KDL SFCFP G++   +ERTPS SEL+E++  QEHL   DLSFVF L+  DN+TLYG CL
Sbjct: 177 KDLHSFCFPGGIEVHAVERTPSMSELSEIILSQEHLRPSDLSFVFRLQVADNSTLYGCCL 236

Query: 62  HVPEIVQRPPGILGI---SSPHSLVSSRFMVSAPRCYCLLTRVPFFELHFEMLNSLIAQE 118
            V EIV +P  +L       P     SR++++  RCYC+LTR+PFFELHF +LNS+  +E
Sbjct: 237 LVEEIVNKPSRLLSTVLDKQPACSSLSRYVMTTRRCYCVLTRLPFFELHFGVLNSIFLEE 296

Query: 119 RLNRITEFINEISLTSCLPPSPKLDDQMSSNANSPDRQSFSD 160
           RL  +   ++ IS  S  PP+    ++ S N +SP ++   D
Sbjct: 297 RLEHL---MSGISCASLEPPT-DFSNEDSLNDSSPQQRDSGD 334