Miyakogusa Predicted Gene

Lj0g3v0134539.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0134539.1 Non Chatacterized Hit- tr|Q9M2S8|Q9M2S8_ARATH
Putative uncharacterized protein T22E16.170
OS=Arabido,52.58,0.00000000000001,seg,NULL; RAD4 PROTEIN RELATED,NULL;
NUCLEOLAR COMPLEX 2 AND RAD4-RELATED,Uncharacterised protein
fa,CUFF.8234.1
         (483 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55510.1 | Symbols: RBL | Noc2p family | chr3:20579232-205821...   275   4e-74
AT2G18220.1 | Symbols:  | Noc2p family | chr2:7928254-7931851 FO...   210   2e-54

>AT3G55510.1 | Symbols: RBL | Noc2p family | chr3:20579232-20582124
           FORWARD LENGTH=594
          Length = 594

 Score =  275 bits (704), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 149/333 (44%), Positives = 212/333 (63%), Gaps = 7/333 (2%)

Query: 153 SYDLGIGENTDEEM---GSDDEERLDRVQPVDDDSAGSWVGKPLTSASVDSLCKLVKEQH 209
           + D   G++ DE +    SD +  LD +  V++  +     K L+ + + + C +V ++ 
Sbjct: 68  AIDAVFGKDDDEVLRDGDSDSDGYLDEL--VNETDSDIMKCKVLSRSFLATCCDMVDKEQ 125

Query: 210 SLSALTCLINAYRAACHNDSEATRVSGCVSSHGIQKSETFCKILMFTLHEADTIFRKFLG 269
            + AL  L+N YRAAC    E + ++     + I+ SETF K+++F L +AD  FR  LG
Sbjct: 126 YVPALVRLLNWYRAACQYGHEPSGIARPNIYYDIEDSETFAKVIIFVLQKADHTFRSILG 185

Query: 270 ISTSSSKKETILDLKNTPKWLSLRPLVKSYLRSTMFLLNQVTESEILTFSICRLRTSIVF 329
           +S SS+K E IL LKN PKW SL+PLVKS+ RST+ L+ Q  + EI++F++ +LR SIVF
Sbjct: 186 LSDSSTK-EKILKLKNNPKWDSLKPLVKSFFRSTLHLVKQAGDLEIISFTLTQLRVSIVF 244

Query: 330 LVAFPSXXXXXXXISVHLWATGDGSLSSDSFLIIQDIASVFSSDCLEICVVKMYKAFISH 389
           L AFP        ISVHLW TG+ ++S  +FLI++DI+ VF+S+C + C++ MYKAF+  
Sbjct: 245 LAAFPDLLKKLIKISVHLWVTGEETISQQAFLILKDISMVFNSECFDSCLINMYKAFLHD 304

Query: 390 AQVVEQRMFQHIHFLRNSFVELCCLDVQKSSNKAMICVQHLGKILQKGWQTKKKEVVKKI 449
             + +    Q   FLR+S VELC  DVQKS  KA + +  L K+L+    TK KE V+KI
Sbjct: 305 CDIPKANSEQR-PFLRDSLVELCSQDVQKSYTKASVSITQLAKLLKMALATKNKEAVEKI 363

Query: 450 CSWQYINCIDLWVTFISANIQDYDLQPLLYMSV 482
            S +YINC+DLWV FISAN+QD DLQPLLY  V
Sbjct: 364 HSGEYINCVDLWVNFISANVQDCDLQPLLYTIV 396


>AT2G18220.1 | Symbols:  | Noc2p family | chr2:7928254-7931851
           FORWARD LENGTH=764
          Length = 764

 Score =  210 bits (535), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 193/357 (54%), Gaps = 32/357 (8%)

Query: 144 DPGFSKFLESYDLG--------IGENTDEEMGSDDEERLDRVQPVDDDSAGSW------- 188
           DP F ++++ +D          I ++ D E  +D    L+  +   DD A          
Sbjct: 70  DPDFFQYMKEHDAELLKFDATEIEDDADVEPDTD----LEDTEKEGDDEATKMEIAKKVH 125

Query: 189 VGKPLTSASVDSLCKLVKEQHSLSALTCLINAYRAACH-----NDSEATRVSGCVSSHGI 243
           V K +T++ VD+  K ++++  L  +  ++ AYR ACH      D ++T+ S       +
Sbjct: 126 VQKTITASMVDAWSKSIEDEAKLGGVRSILRAYRTACHYGDDTGDDQSTKFS-------V 178

Query: 244 QKSETFCKILMFTLHEADTIFRKFLGISTSS-SKKETILDLKNTPKWLSLRPLVKSYLRS 302
             SE F KI+++ L E D I RK L     +   KETIL+L NT  W +   LVKSYL +
Sbjct: 179 MSSEVFNKIMIYVLSEMDGILRKLLRFPEDTRGTKETILELTNTRPWKNYNHLVKSYLGN 238

Query: 303 TMFLLNQVTESEILTFSICRLRTSIVFLVAFPSXXXXXXXISVHLWATGDGSLSSDSFLI 362
           ++ +LNQ+T++E++TF++ RL+ S VFL AFPS       +++H W TG G+L   S L 
Sbjct: 239 SLHVLNQMTDTEMITFTLRRLKHSSVFLAAFPSLLRKYIKVALHFWGTGSGALPVVSLLF 298

Query: 363 IQDIASVFSSDCLEICVVKMYKAFISHAQVVEQRMFQHIHFLRNSFVELCCLDVQKSSNK 422
           ++D+     SDC++ C   MYKA++ + Q V     +HI FL N F+EL   D+  +   
Sbjct: 299 LRDLCIRLGSDCVDDCFKGMYKAYVLNCQFVNADKLKHISFLGNCFIELLGTDISAAYQH 358

Query: 423 AMICVQHLGKILQKGWQTKKKEVVKKICSWQYINCIDLWVTFISANIQDYDLQPLLY 479
           A + ++ L  IL++   TK KE  +K+  W++I+C++LW   + A     +L+P+ Y
Sbjct: 359 AFVFIRQLAMILREALNTKTKEAFRKVYQWKFIHCLELWTGAVCAYSSQSELRPVAY 415