Miyakogusa Predicted Gene

Lj0g3v0134359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0134359.1 Non Chatacterized Hit- tr|I1KAC6|I1KAC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22847 PE,85,0,seg,NULL;
N-GLYCOSYLASE/DNA LYASE,NULL; HhH-GPD,HhH-GPD domain;
OGG_N,8-oxoguanine DNA glycosylase, ,CUFF.8222.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21710.1 | Symbols: OGG1, ATOGG1 | 8-oxoguanine-DNA glycosyla...   333   4e-92
AT3G47830.1 | Symbols:  | DNA glycosylase superfamily protein | ...    60   2e-09

>AT1G21710.1 | Symbols: OGG1, ATOGG1 | 8-oxoguanine-DNA glycosylase
           1 | chr1:7624439-7625869 FORWARD LENGTH=365
          Length = 365

 Score =  333 bits (855), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 160/220 (72%), Positives = 179/220 (81%)

Query: 1   MWKVFSDSDARFAELARHLGGARVLRQDPFECLIQFLCSSNNNIGRITKMVDYVSSLGSY 60
           +W  FS  D RF ELARHL GARVLRQDP ECLIQFLCSSNNNI RITKMVD+VSSLG +
Sbjct: 122 LWSDFSKKDPRFGELARHLRGARVLRQDPLECLIQFLCSSNNNIARITKMVDFVSSLGLH 181

Query: 61  LGPVGDFHFHAFPTXXXXXXXXXXXXRDAGFGYRAKYIIGTVNALQSKPEGGEEWLRSLR 120
           LG +  F FH FP+            R AGFGYRAKYI GTVNALQ+KP GG EWL SLR
Sbjct: 182 LGDIDGFEFHQFPSLDRLSRVSEEEFRKAGFGYRAKYITGTVNALQAKPGGGNEWLLSLR 241

Query: 121 KLDLQDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWKIAKRYILPELAGSSLT 180
           K++LQ+ ++AL TLPGVGPKVAACIALFSLDQH A+PVDTHVW+IA  Y+LP+LAG+ LT
Sbjct: 242 KVELQEAVAALCTLPGVGPKVAACIALFSLDQHSAIPVDTHVWQIATNYLLPDLAGAKLT 301

Query: 181 PKLCNRVAEAFVTKYGKYAGWAQTLLFIAELPSQKTLLPS 220
           PKL  RVAEAFV+KYG+YAGWAQTLLFIAELP+QKTLL S
Sbjct: 302 PKLHGRVAEAFVSKYGEYAGWAQTLLFIAELPAQKTLLQS 341


>AT3G47830.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr3:17647069-17648346 FORWARD LENGTH=293
          Length = 293

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 94  RAKYIIGTVNALQSKPEGGEEWLRSLRKLDLQDVISALSTLPGVGPKVAACIALFSLDQH 153
           +A  I   +N LQ+  E G   L  LR L +++V + LS   GVGPK  +C+ +F+L QH
Sbjct: 152 KAVCIKNILNRLQN--ERGRLCLEYLRGLSVEEVKTELSHFKGVGPKTVSCVLMFNL-QH 208

Query: 154 HAVPVDTHVWKIAK 167
           +  PVDTHV++IAK
Sbjct: 209 NDFPVDTHVFEIAK 222