Miyakogusa Predicted Gene

Lj0g3v0133819.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0133819.1 Non Chatacterized Hit- tr|B9G1H1|B9G1H1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.69,8e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.8178.1
         (74 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64250.1 | Symbols:  | Aldolase-type TIM barrel family protei...   110   3e-25
AT5G64250.2 | Symbols:  | Aldolase-type TIM barrel family protei...   109   3e-25

>AT5G64250.1 | Symbols:  | Aldolase-type TIM barrel family protein
          | chr5:25697623-25698752 REVERSE LENGTH=293
          Length = 293

 Score =  110 bits (274), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 62/68 (91%)

Query: 1  MRELIKKTRTLTDKPFGVGLVLAFPYEENLKVILDEKVAVLQIYWGDCTRELVAKAHAAG 60
          +RELI+KT+TLT+KPFG+G+VLAFP++ N+K IL+EKVAVLQ+YWGDC++ELV  AH AG
Sbjct: 9  LRELIRKTKTLTEKPFGIGVVLAFPHDLNIKTILEEKVAVLQLYWGDCSQELVDDAHFAG 68

Query: 61 VKVIPQVS 68
          VKVIPQV 
Sbjct: 69 VKVIPQVG 76


>AT5G64250.2 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:25697623-25698945 REVERSE LENGTH=333
          Length = 333

 Score =  109 bits (273), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 62/68 (91%)

Query: 1   MRELIKKTRTLTDKPFGVGLVLAFPYEENLKVILDEKVAVLQIYWGDCTRELVAKAHAAG 60
           +RELI+KT+TLT+KPFG+G+VLAFP++ N+K IL+EKVAVLQ+YWGDC++ELV  AH AG
Sbjct: 49  LRELIRKTKTLTEKPFGIGVVLAFPHDLNIKTILEEKVAVLQLYWGDCSQELVDDAHFAG 108

Query: 61  VKVIPQVS 68
           VKVIPQV 
Sbjct: 109 VKVIPQVG 116