Miyakogusa Predicted Gene

Lj0g3v0132789.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0132789.2 Non Chatacterized Hit- tr|E1Z4R0|E1Z4R0_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,28.33,1e-18,HYPOTHETICAL PROTEIN,NULL; WD40 REPEAT
FAMILY,NULL; WD40 repeat-like,WD40-repeat-containing domain;
,CUFF.8100.2
         (339 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G12920.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   365   e-101
AT5G12920.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...   364   e-101
AT5G12920.3 | Symbols:  | Transducin/WD40 repeat-like superfamil...   358   3e-99

>AT5G12920.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:4077917-4082585 REVERSE LENGTH=537
          Length = 537

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/343 (52%), Positives = 237/343 (69%), Gaps = 15/343 (4%)

Query: 7   PLNLQLDAVKWNLHNQDEVVCASIKHQGLLIFDVASYSSEPTEVLKTRHRPTVDGYSILK 66
           P   + D  +WN  NQ+EV C S KH  +LIFD++  S +PTEVL+TR + ++ G  I +
Sbjct: 187 PPGREFDVARWNPSNQNEVACTSRKHDQVLIFDISYMSPKPTEVLQTRQKLSIIGRKISR 246

Query: 67  GFSDVAFAPN-DSRIFASDTRGTINVWDKRGKILPCLEFTSASHDILNSIQLSADNQIIF 125
           G SDVA   + DSRIF+ DT G ++VWD+R  + PC+E ++  +D + SIQ+  DNQ IF
Sbjct: 247 GLSDVAITSDEDSRIFSPDTLGMVHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQTIF 306

Query: 126 GAGNKGLLHVWDIRGGRVSTNFQSHKELCYP-------------PLTSVKLATLLEKIGS 172
           GAG +G++H+WD+RGGR S+ FQS K++                PL S+ LA  L+KI S
Sbjct: 307 GAGKEGIIHIWDLRGGRNSSAFQSRKDVSLTRGELELAMAMSQLPLASLHLAPKLQKIAS 366

Query: 173 LKAQTKIISKEIHSIAINPSCPYQLAFHLDDGWSGILDINNFQVTHIHCPPPPWLNDSYV 232
           LKAQ++I+ KEIHSI +NPS P+QLAFHLDDGWSG+LDI   +VTH+HCPPP WL+ S  
Sbjct: 367 LKAQSEIVPKEIHSIDVNPSSPHQLAFHLDDGWSGVLDIYKSEVTHVHCPPPAWLDGSNS 426

Query: 233 PTDVSYLRKPSWLSTCSIYMTGSPCNSGIHLLDFYPSTSSPSHVDYRENIEEFNGQNKQN 292
             D+  LRKPSWL T SIY+ GS    GIH+LDF+PS+ SP HVDY E+ +    ++K N
Sbjct: 427 SADL-ILRKPSWLPTSSIYVVGSMSEKGIHVLDFHPSSRSPCHVDYDEDTQRNEKRDKCN 485

Query: 293 NRNRFISLSEEVISCAAHPLYNAIVAGTKESSLLVISQRRESS 335
           +RN+F+SLSE V  CAAHPL   IVAGT+ SSLL+I+Q   SS
Sbjct: 486 HRNKFVSLSETVTGCAAHPLNGMIVAGTQNSSLLLIAQMHCSS 528


>AT5G12920.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:4077917-4082585 REVERSE LENGTH=572
          Length = 572

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/343 (52%), Positives = 237/343 (69%), Gaps = 15/343 (4%)

Query: 7   PLNLQLDAVKWNLHNQDEVVCASIKHQGLLIFDVASYSSEPTEVLKTRHRPTVDGYSILK 66
           P   + D  +WN  NQ+EV C S KH  +LIFD++  S +PTEVL+TR + ++ G  I +
Sbjct: 222 PPGREFDVARWNPSNQNEVACTSRKHDQVLIFDISYMSPKPTEVLQTRQKLSIIGRKISR 281

Query: 67  GFSDVAFAPN-DSRIFASDTRGTINVWDKRGKILPCLEFTSASHDILNSIQLSADNQIIF 125
           G SDVA   + DSRIF+ DT G ++VWD+R  + PC+E ++  +D + SIQ+  DNQ IF
Sbjct: 282 GLSDVAITSDEDSRIFSPDTLGMVHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQTIF 341

Query: 126 GAGNKGLLHVWDIRGGRVSTNFQSHKELCYP-------------PLTSVKLATLLEKIGS 172
           GAG +G++H+WD+RGGR S+ FQS K++                PL S+ LA  L+KI S
Sbjct: 342 GAGKEGIIHIWDLRGGRNSSAFQSRKDVSLTRGELELAMAMSQLPLASLHLAPKLQKIAS 401

Query: 173 LKAQTKIISKEIHSIAINPSCPYQLAFHLDDGWSGILDINNFQVTHIHCPPPPWLNDSYV 232
           LKAQ++I+ KEIHSI +NPS P+QLAFHLDDGWSG+LDI   +VTH+HCPPP WL+ S  
Sbjct: 402 LKAQSEIVPKEIHSIDVNPSSPHQLAFHLDDGWSGVLDIYKSEVTHVHCPPPAWLDGSNS 461

Query: 233 PTDVSYLRKPSWLSTCSIYMTGSPCNSGIHLLDFYPSTSSPSHVDYRENIEEFNGQNKQN 292
             D+  LRKPSWL T SIY+ GS    GIH+LDF+PS+ SP HVDY E+ +    ++K N
Sbjct: 462 SADL-ILRKPSWLPTSSIYVVGSMSEKGIHVLDFHPSSRSPCHVDYDEDTQRNEKRDKCN 520

Query: 293 NRNRFISLSEEVISCAAHPLYNAIVAGTKESSLLVISQRRESS 335
           +RN+F+SLSE V  CAAHPL   IVAGT+ SSLL+I+Q   SS
Sbjct: 521 HRNKFVSLSETVTGCAAHPLNGMIVAGTQNSSLLLIAQMHCSS 563


>AT5G12920.3 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:4077917-4082585 REVERSE LENGTH=554
          Length = 554

 Score =  358 bits (919), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 179/357 (50%), Positives = 237/357 (66%), Gaps = 29/357 (8%)

Query: 7   PLNLQLDAVKWNLHNQDEVVCASIKHQGLLIFDVASYSSEPTE----------------- 49
           P   + D  +WN  NQ+EV C S KH  +LIFD++  S +PTE                 
Sbjct: 190 PPGREFDVARWNPSNQNEVACTSRKHDQVLIFDISYMSPKPTEKQETQMYRRISILGNCK 249

Query: 50  ----------VLKTRHRPTVDGYSILKGFSDVAFAPN-DSRIFASDTRGTINVWDKRGKI 98
                     VL+TR + ++ G  I +G SDVA   + DSRIF+ DT G ++VWD+R  +
Sbjct: 250 IPVPTWFPKSVLQTRQKLSIIGRKISRGLSDVAITSDEDSRIFSPDTLGMVHVWDRRAGV 309

Query: 99  LPCLEFTSASHDILNSIQLSADNQIIFGAGNKGLLHVWDIRGGRVSTNFQSHKELCYPPL 158
            PC+E ++  +D + SIQ+  DNQ IFGAG +G++H+WD+RGGR S+ FQS K++   PL
Sbjct: 310 SPCIELSTDRYDSIKSIQIYVDNQTIFGAGKEGIIHIWDLRGGRNSSAFQSRKDMSQLPL 369

Query: 159 TSVKLATLLEKIGSLKAQTKIISKEIHSIAINPSCPYQLAFHLDDGWSGILDINNFQVTH 218
            S+ LA  L+KI SLKAQ++I+ KEIHSI +NPS P+QLAFHLDDGWSG+LDI   +VTH
Sbjct: 370 ASLHLAPKLQKIASLKAQSEIVPKEIHSIDVNPSSPHQLAFHLDDGWSGVLDIYKSEVTH 429

Query: 219 IHCPPPPWLNDSYVPTDVSYLRKPSWLSTCSIYMTGSPCNSGIHLLDFYPSTSSPSHVDY 278
           +HCPPP WL+ S    D+  LRKPSWL T SIY+ GS    GIH+LDF+PS+ SP HVDY
Sbjct: 430 VHCPPPAWLDGSNSSADL-ILRKPSWLPTSSIYVVGSMSEKGIHVLDFHPSSRSPCHVDY 488

Query: 279 RENIEEFNGQNKQNNRNRFISLSEEVISCAAHPLYNAIVAGTKESSLLVISQRRESS 335
            E+ +    ++K N+RN+F+SLSE V  CAAHPL   IVAGT+ SSLL+I+Q   SS
Sbjct: 489 DEDTQRNEKRDKCNHRNKFVSLSETVTGCAAHPLNGMIVAGTQNSSLLLIAQMHCSS 545