Miyakogusa Predicted Gene
- Lj0g3v0132579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0132579.1 Non Chatacterized Hit- tr|I1JK94|I1JK94_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,72.54,0,CYT_DCMP_DEAMINASES,APOBEC/CMP deaminase, zinc-binding;
Cytidine deaminase-like,Cytidine deaminase-l,CUFF.8079.1
(426 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G20960.1 | Symbols: | Cytidine/deoxycytidylate deaminase fam... 394 e-110
AT3G47390.2 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase... 108 5e-24
AT3G47390.1 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase... 108 6e-24
>AT4G20960.1 | Symbols: | Cytidine/deoxycytidylate deaminase family
protein | chr4:11212077-11213530 FORWARD LENGTH=426
Length = 426
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/360 (56%), Positives = 261/360 (72%), Gaps = 8/360 (2%)
Query: 69 EVDDGFYIRKCVELAKKALGFTSPNPLVGCVIVKDGKIVGQGFHPKAGQPHAEVFALRDA 128
EVDD FY+RKCVELAK+A+G TSPNP+VGCVIVKDG IVGQGFHPKAGQPHAEVFALRDA
Sbjct: 71 EVDDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFALRDA 130
Query: 129 GDLAEGATAYVSLEPCNHFGRTGPCSEALIRAKVKKVVIGMVDPNPIVASKGVDRLRDXX 188
G+LAE ATAYVSLEPCNH+GRT PC+EALI+AKV++VVIGMVDPNPIV S G+ RL+D
Sbjct: 131 GELAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGISRLKDAG 190
Query: 189 XXXXXXXXXXLCKSLLEAYIHRMLTGRPFLTLRYSLSVNGNFLVILGNGVTECGGYYSRL 248
LCK + E +IHRMLTG+PFL LRYS+SVNG L +G G ++ GGYYS+L
Sbjct: 191 IDVTVSVEEELCKKMNEGFIHRMLTGKPFLALRYSMSVNGCLLDKIGQGASDSGGYYSKL 250
Query: 249 LQEYDAVILSSSLFSENMSLDSMSASKEPGANQPIRIIIHRNPSSSNQLATNEVTD---- 304
LQEYDA+ILSSSL E S+ S A + QPI+II+ N S+ LA++ +
Sbjct: 251 LQEYDAIILSSSLSDELSSISSQEAINV--SIQPIQIIVASNAQQSHILASSHTVEESGP 308
Query: 305 KMIIFTDYEAAAAPEVAQQGIETVYLDQINLEVIMDYCYRQGLCSVLLDMRGHFSEFEEL 364
K+++FT E+ A ++ G+ETV L++INL+ I+DYCY +GLCSVLLD+RG+ + E L
Sbjct: 309 KVVVFTAKESVAESGISSSGVETVVLEKINLDSILDYCYNRGLCSVLLDLRGNVKDLEVL 368
Query: 365 VKAGIKKKYINTFVAEILPVWNGHAETDPLLPSKILEQGLQVVNLQSKTSDQSVVIEGYF 424
++ G ++K + + E+LP W+ E + K LE V +LQSK SV++EGYF
Sbjct: 369 LRDGFEQKLLQKVIIEVLPEWSTKDERQ-IASMKWLESK-HVKDLQSKQLGGSVLLEGYF 426
>AT3G47390.2 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase
family protein | chr3:17462094-17464655 FORWARD
LENGTH=596
Length = 596
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 170/375 (45%), Gaps = 31/375 (8%)
Query: 72 DGFYIRKCVELAKKALGFTSPNPLVGCVI-VKDGKIVGQGFHPKAGQPHAEVFALRDAGD 130
D +IR+ +L++ + G TSP+P GCVI GK+ G+G+ G AE A+ AG+
Sbjct: 32 DAAFIRRAADLSEMSAGLTSPHPNFGCVIATSSGKVAGEGYLYAQGTKPAEALAVEAAGE 91
Query: 131 LAEGATAYVSLEPCNHFGRTGPCSEALIRAKVKKVVIGMVDPNPIVASKGVDRLRDXXXX 190
+ GATAY+++EP + G S AL++A +++VV+G+ P + + LR
Sbjct: 92 FSRGATAYLNMEPGDCHGDHTAVS-ALVQAGIERVVVGIRHPLQHLRGSAIRELRSHGIE 150
Query: 191 XXXXXXXXLCKSLLEA----------YIHRMLTGRPFLTLRYSLSVNGNFLVILGNGVTE 240
K L +A IHR + PF L+Y+++++G G+
Sbjct: 151 VNVLGEDFESKVLEDARKSCLLVNAPLIHRACSRVPFSVLKYAMTLDGKIAASSGHAAWI 210
Query: 241 CGGYYSRLLQEY----DAVILSSSLFSENMSLDSMSASKEPGANQPIRIIIHRN---PSS 293
+ E DAVI+ + ++ D ++ + P RI++ ++ P
Sbjct: 211 SSKLSRTRVFELRGGSDAVIVGGNTVRQD---DPRLTARHGQGHTPTRIVMTQSLDLPEK 267
Query: 294 SNQLATNEVTDKMIIFTDYEAAAAPEVAQQGIETVYLDQINLEVIMDYCYRQGLCSVLLD 353
+N +EV+ ++ + +A +G+E V D +N +M+Y + +G S+L +
Sbjct: 268 ANLWDVSEVSTIVVTQRGARKSFQKLLASKGVEVVEFDMLNPREVMEYFHLRGYLSILWE 327
Query: 354 MRGHFSEFEELVKAGIKKKYINTFVAEILP-VWNGHAETDPLLPSKILE--QGLQVVNLQ 410
G L + I I+ VA + P + G P+ ++E Q L ++++
Sbjct: 328 CGG------TLAASAISSSVIHKVVAFVAPKIIGGSKAPSPVGDLGMVEMTQALNLIDVC 381
Query: 411 SKTSDQSVVIEGYFK 425
+ +++ G+ +
Sbjct: 382 YEQVGPDMLVSGFLQ 396
>AT3G47390.1 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase
family protein | chr3:17462094-17464655 FORWARD
LENGTH=599
Length = 599
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 170/375 (45%), Gaps = 31/375 (8%)
Query: 72 DGFYIRKCVELAKKALGFTSPNPLVGCVI-VKDGKIVGQGFHPKAGQPHAEVFALRDAGD 130
D +IR+ +L++ + G TSP+P GCVI GK+ G+G+ G AE A+ AG+
Sbjct: 32 DAAFIRRAADLSEMSAGLTSPHPNFGCVIATSSGKVAGEGYLYAQGTKPAEALAVEAAGE 91
Query: 131 LAEGATAYVSLEPCNHFGRTGPCSEALIRAKVKKVVIGMVDPNPIVASKGVDRLRDXXXX 190
+ GATAY+++EP + G S AL++A +++VV+G+ P + + LR
Sbjct: 92 FSRGATAYLNMEPGDCHGDHTAVS-ALVQAGIERVVVGIRHPLQHLRGSAIRELRSHGIE 150
Query: 191 XXXXXXXXLCKSLLEA----------YIHRMLTGRPFLTLRYSLSVNGNFLVILGNGVTE 240
K L +A IHR + PF L+Y+++++G G+
Sbjct: 151 VNVLGEDFESKVLEDARKSCLLVNAPLIHRACSRVPFSVLKYAMTLDGKIAASSGHAAWI 210
Query: 241 CGGYYSRLLQEY----DAVILSSSLFSENMSLDSMSASKEPGANQPIRIIIHRN---PSS 293
+ E DAVI+ + ++ D ++ + P RI++ ++ P
Sbjct: 211 SSKLSRTRVFELRGGSDAVIVGGNTVRQD---DPRLTARHGQGHTPTRIVMTQSLDLPEK 267
Query: 294 SNQLATNEVTDKMIIFTDYEAAAAPEVAQQGIETVYLDQINLEVIMDYCYRQGLCSVLLD 353
+N +EV+ ++ + +A +G+E V D +N +M+Y + +G S+L +
Sbjct: 268 ANLWDVSEVSTIVVTQRGARKSFQKLLASKGVEVVEFDMLNPREVMEYFHLRGYLSILWE 327
Query: 354 MRGHFSEFEELVKAGIKKKYINTFVAEILP-VWNGHAETDPLLPSKILE--QGLQVVNLQ 410
G L + I I+ VA + P + G P+ ++E Q L ++++
Sbjct: 328 CGG------TLAASAISSSVIHKVVAFVAPKIIGGSKAPSPVGDLGMVEMTQALNLIDVC 381
Query: 411 SKTSDQSVVIEGYFK 425
+ +++ G+ +
Sbjct: 382 YEQVGPDMLVSGFLQ 396