Miyakogusa Predicted Gene

Lj0g3v0132279.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0132279.2 tr|E7KK79|E7KK79_YEASL YBR030W-like protein
OS=Saccharomyces cerevisiae (strain Lalvin QA23)
GN=QA23,25.59,1e-18,seg,NULL; UNCHARACTERIZED PUTATIVE
METHYLTRANSFERASE,NULL; SET domain,NULL; no description,NULL;
SET,CUFF.8058.2
         (443 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56570.1 | Symbols:  | SET domain-containing protein | chr3:2...   281   7e-76
AT1G14030.1 | Symbols:  | Rubisco methyltransferase family prote...    54   2e-07
AT3G07670.1 | Symbols:  | Rubisco methyltransferase family prote...    51   2e-06

>AT3G56570.1 | Symbols:  | SET domain-containing protein |
           chr3:20958660-20961137 FORWARD LENGTH=531
          Length = 531

 Score =  281 bits (719), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 131/207 (63%), Positives = 158/207 (76%)

Query: 1   MATRRLRAFKRWMKSNGFEWSDSLEFVDTPEEGIAVRALSQLKEGEVVAKMPKEACLTIK 60
           MATRRLRAFKRWM++NG + S++L  VD   +G++VRA   LKEG+VVA + K ACLTIK
Sbjct: 1   MATRRLRAFKRWMQANGVDCSEALNLVDDENDGVSVRAFCDLKEGDVVANISKTACLTIK 60

Query: 61  TSGASEIIEXXXXXXXXXXXXXIMYERSLGGDSPWYGYLQVLPQQECLPLVWTLNEVNDL 120
           TSGA E+IE             +MYERSLG +SPW GYLQ+LP QE LPLVW+L +++ L
Sbjct: 61  TSGAREMIESADLDGSLGLSVALMYERSLGEESPWAGYLQILPIQEDLPLVWSLEDLDSL 120

Query: 121 LCGTELHQTVQEDKTLMYEDWKENILPLLDLAPSELNPEFFSVEQYFAAKSLITSRGFEI 180
           L GTELH+ V+ED  L+YEDWKENILPL    P  ++ + F +++Y AAKSLI SR FEI
Sbjct: 121 LSGTELHKLVKEDHVLIYEDWKENILPLTSSLPQNVDSDSFGIKEYLAAKSLIASRSFEI 180

Query: 181 DDYHGSGMVPLADLFNHKTGAEDVHFT 207
           DDYHGSGMVPLADLFNHKTGAEDVHFT
Sbjct: 181 DDYHGSGMVPLADLFNHKTGAEDVHFT 207



 Score =  200 bits (508), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/201 (53%), Positives = 133/201 (66%), Gaps = 15/201 (7%)

Query: 255 SSVTEGDASILEMIMIKDVSSGAEVFNTYGIMGNAALLHRYGFTEQDNLFDIVNIDLELV 314
           SS+ + D S L+MIM+KDVS+GAEVFNTYG+MGNAALLHRYGFTE DN +DIVNIDLELV
Sbjct: 282 SSMLQNDQSGLKMIMVKDVSAGAEVFNTYGLMGNAALLHRYGFTELDNPYDIVNIDLELV 341

Query: 315 LQWCSSLFSDRQCRTRVSLWRRLGYSASDSENSEYFEISFDGEPQTEXXXXXXXXXXPDD 374
            +W +S F+ R  R R++LWR+LGY+  +S+NSEYFE+S  GEPQTE          PDD
Sbjct: 342 TEWSTSSFTSRYTRARLALWRKLGYTGCESQNSEYFEVSSTGEPQTELLILLYILLLPDD 401

Query: 375 AYHKLDLSVSVAGNC-----HESSETSLSNMSKKSV---------LTKEVCNALLSLADM 420
            Y+KLDL+ S  G         SS   ++    K V         LT  VC ALL++ D 
Sbjct: 402 TYNKLDLAESTTGASPSKEGKRSSSYEITIGKHKFVYGESGNDILLTDGVCEALLTIVDK 461

Query: 421 RESLYGS-KSMEDDIEALGRC 440
           RESLYGS  S+EDDI  +  C
Sbjct: 462 RESLYGSLSSLEDDIVRVKTC 482


>AT1G14030.1 | Symbols:  | Rubisco methyltransferase family protein
           | chr1:4805493-4807440 REVERSE LENGTH=482
          Length = 482

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 10/196 (5%)

Query: 6   LRAFKRWMKSNGFEWSDSLEFVDTPEEGIAVRALSQLKEGEVVAKMPKEACLTIKTSGAS 65
           +R F +W++  G     S+       EG+ + A   +   EVV ++PK   +  +T  AS
Sbjct: 49  VRNFWKWLRDQGVVSGKSVAEPAVVPEGLGLVARRDIGRNEVVLEIPKRLWINPETVTAS 108

Query: 66  EIIEXXXXXXXXXXXXXIMYERSLGGDSPWYGYLQVLPQQECLPLVWTLNEVNDLLCGTE 125
           +I                +       +S W  YL +LPQ     + W+  E+ + L GT+
Sbjct: 109 KIGPLCGGLKPWVSVALFLIREKYEEESSWRVYLDMLPQSTDSTVFWSEEELAE-LKGTQ 167

Query: 126 LHQTVQEDKTLMYEDW----KENILPLLDLAPSELNPEFFSVEQYFAAKSLITSRGFEID 181
           L  T    K  +  ++    +E +LP  DL  S +     +++ +  A  ++ SR F   
Sbjct: 168 LLSTTLGVKEYVENEFLKLEQEILLPNKDLFSSRI-----TLDDFIWAFGILKSRAFSRL 222

Query: 182 DYHGSGMVPLADLFNH 197
                 ++PLADL NH
Sbjct: 223 RGQNLVLIPLADLINH 238


>AT3G07670.1 | Symbols:  | Rubisco methyltransferase family protein
           | chr3:2451651-2454617 FORWARD LENGTH=504
          Length = 504

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 14/204 (6%)

Query: 8   AFKRWMKSNGFEWSD-SLEFVDTPEEGIAVRALSQLKEGEVVAKMPKEACLTIKT----S 62
           + + W+  +G      +++ VD  E G+   A   L++GE +  +P    ++  +    +
Sbjct: 76  SLQNWLSDSGLPPQKMAIDRVDIGERGLV--ASQNLRKGEKLLFVPPSLVISADSEWTNA 133

Query: 63  GASEIIEXXXXXXXXXXXXXIMYERSLGGDSPWYGYLQVLPQQECLPLVWTLNEVNDLLC 122
            A E+++             ++ E SL   S W+ Y+  LP+Q    L WT  E++  L 
Sbjct: 134 EAGEVMKRYDVPDWPLLATYLISEASLQKSSRWFNYISALPRQPYSLLYWTRTELDMYLE 193

Query: 123 GTELHQTVQEDKTLM---YEDWKENILPLLDLAPSELNPEFFSVEQYFAAKSLITSRGFE 179
            +++ +   E  T +   YED +  I       P     E F+ E +  +  ++ SR   
Sbjct: 194 ASQIRERAIERITNVVGTYEDLRSRI---FSKHPQLFPKEVFNDETFKWSFGILFSRLVR 250

Query: 180 IDDYHGS-GMVPLADLFNHKTGAE 202
           +    G   +VP AD+ NH    E
Sbjct: 251 LPSMDGRFALVPWADMLNHNCEVE 274