Miyakogusa Predicted Gene
- Lj0g3v0131909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0131909.1 Non Chatacterized Hit- tr|I1JG31|I1JG31_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21199 PE,61.14,0,FAMILY
NOT NAMED,NULL; helix loop helix domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain;,CUFF.8023.1
(370 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 256 2e-68
AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 167 8e-42
AT2G42280.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 150 1e-36
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 142 5e-34
AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 139 4e-33
AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 137 9e-33
AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 134 1e-31
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 89 6e-18
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 85 9e-17
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 82 7e-16
AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting basic-hel... 78 1e-14
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 76 5e-14
AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 76 5e-14
AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 76 5e-14
AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 8e-14
AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 8e-14
AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 74 2e-13
AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 73 3e-13
AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 73 3e-13
AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 3e-13
AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 72 4e-13
AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 5e-13
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 2e-12
AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 7e-12
AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 69 7e-12
AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 69 8e-12
AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 | chr1:63... 68 8e-12
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 68 1e-11
AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 1e-11
AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 68 1e-11
AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 68 1e-11
AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 1e-11
AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 1e-11
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 67 1e-11
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr... 67 1e-11
AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 2e-11
AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 2e-11
AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 | chr... 65 7e-11
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 63 4e-10
AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 63 4e-10
AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 62 6e-10
AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 7e-10
AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 3e-09
AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 3e-09
AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 4e-09
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 58 8e-09
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 58 8e-09
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 57 3e-08
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 56 3e-08
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 56 3e-08
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 56 4e-08
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 7e-08
AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 | chr5:1503... 55 8e-08
AT5G33210.1 | Symbols: SRS8 | SHI-related sequence 8 | chr5:1246... 54 1e-07
AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 | chr1:247953... 54 1e-07
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 54 2e-07
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 53 4e-07
AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 4e-07
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 9e-07
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
>AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17611428-17613163 REVERSE
LENGTH=359
Length = 359
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 203/371 (54%), Gaps = 61/371 (16%)
Query: 21 RFRSAPSSFLSNLTPS---VINNERLLNRFASYGAADTNSISISCNDTSAASPSFQDFE- 76
RFRSAPSS L+ +++RLL+RF + + + SP F+D
Sbjct: 19 RFRSAPSSVLAAFVDDDKIGFDSDRLLSRFVTSNGVNGD----------LGSPKFEDKSP 68
Query: 77 ---ENKPFSKGMNXXXXXXXXXXXXXXLPPHYPRHGS---SSAAMDGYL----------- 119
N S LPPHYPR +S +D +L
Sbjct: 69 VSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNSVGLDQFLGINNHHTKPVE 128
Query: 120 ---LRQGSSPASLFSNGSFQNGFGAMKCVGNYDAVNGNNGQISPS-IDRLKXXXXXXXXX 175
LRQ SSPA +F+N S QNG+G+M+ + NY+ + SPS + L+
Sbjct: 129 SNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNYEE-----DEESPSNSNGLRRHCSLSSRP 183
Query: 176 XXXXXXXXQISEIEGEEDIGATSPDDXXXXXXXXXXFPYTSWNDTPQLSENFIGLKRGRS 235
QI EI E + FPY+ WND +N LKR
Sbjct: 184 PSSLGMLSQIPEIAPETN------------------FPYSHWNDPSSFIDNLSSLKREAE 225
Query: 236 GNERMFSELQNGELGSQVHTLTHHLSLPK---TSAEMAAMDKLLQFPDSVPCKIRAKRGC 292
+ ++F QNGE G+++ L+HHLSLPK T+++M ++DK LQ DSVPCKIRAKRGC
Sbjct: 226 DDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGC 285
Query: 293 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTLSEK 352
ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ+Q+K L++
Sbjct: 286 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDN 345
Query: 353 RAKCKCVSTQK 363
RA CKC++ +K
Sbjct: 346 RANCKCMNKEK 356
>AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:18943802-18945613 REVERSE
LENGTH=379
Length = 379
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 137/243 (56%), Gaps = 17/243 (6%)
Query: 119 LLRQGSSPASLFSNGSFQNGFGA-MKCVGNYDAVNGNNGQISPSIDRLKXXXXXXXXXXX 177
L R SSPA LFS+ + + A MK +G + G + +S S
Sbjct: 152 LARHNSSPAGLFSSIDVETAYAAVMKSMGGF----GGSNVMSTSNTEASSLTPRSKLLPP 207
Query: 178 XXXXXXQISEIEGEEDIGATSPDDXXXXXXXXXXFPYTSWNDTPQLSENFIGLKRGRSGN 237
ISE++ + + P S+ + S L R +SG
Sbjct: 208 TSRAMSPISEVDVKPGFSSRLPPRTLSGGFNR------SFGNEGSASSKLTALARTQSGG 261
Query: 238 ERMFSELQNGELGSQVHTLTHHLSLPKTSAEMAAMDKLLQFPDSVPCKIRAKRGCATHPR 297
+ + ++ + S+ L HH+SLPK+ ++ +++LL DS+PCKIRAKRGCATHPR
Sbjct: 262 LDQY-KTKDEDSASRRPPLAHHMSLPKS---LSDIEQLLS--DSIPCKIRAKRGCATHPR 315
Query: 298 SIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTLSEKRAKCK 357
SIAERVRRT+ISERMRKLQ+LVPNMD QTNT+DMLDLAV YIKDLQ+Q K L E RA+C+
Sbjct: 316 SIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCR 375
Query: 358 CVS 360
C S
Sbjct: 376 CSS 378
>AT2G42280.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17611891-17613163 REVERSE
LENGTH=300
Length = 300
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 147/311 (47%), Gaps = 61/311 (19%)
Query: 21 RFRSAPSSFLSNLTPS---VINNERLLNRFASYGAADTNSISISCNDTSAASPSFQDFE- 76
RFRSAPSS L+ +++RLL+RF + + + SP F+D
Sbjct: 19 RFRSAPSSVLAAFVDDDKIGFDSDRLLSRFVTSNGVNGD----------LGSPKFEDKSP 68
Query: 77 ---ENKPFSKGMNXXXXXXXXXXXXXXLPPHYPRHGS---SSAAMDGYL----------- 119
N S LPPHYPR +S +D +L
Sbjct: 69 VSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGIMNSVGLDQFLGINNHHTKPVE 128
Query: 120 ---LRQGSSPASLFSNGSFQNGFGAMKCVGNYDAVNGNNGQISPS-IDRLKXXXXXXXXX 175
LRQ SSPA +F+N S QNG+G+M+ + NY+ + SPS + L+
Sbjct: 129 SNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNYEE-----DEESPSNSNGLRRHCSLSSRP 183
Query: 176 XXXXXXXXQISEIEGEEDIGATSPDDXXXXXXXXXXFPYTSWNDTPQLSENFIGLKRGRS 235
QI EI E + FPY+ WND +N LKR
Sbjct: 184 PSSLGMLSQIPEIAPETN------------------FPYSHWNDPSSFIDNLSSLKREAE 225
Query: 236 GNERMFSELQNGELGSQVHTLTHHLSLPK---TSAEMAAMDKLLQFPDSVPCKIRAKRGC 292
+ ++F QNGE G+++ L+HHLSLPK T+++M ++DK LQ DSVPCKIRAKRGC
Sbjct: 226 DDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGC 285
Query: 293 ATHPRSIAERV 303
ATHPRSIAERV
Sbjct: 286 ATHPRSIAERV 296
>AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:13040092-13041907 FORWARD
LENGTH=259
Length = 259
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 78/87 (89%), Gaps = 2/87 (2%)
Query: 272 MDKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDM 331
MDK+ F DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+R+LQELVPNMDKQTNT+DM
Sbjct: 169 MDKI--FEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADM 226
Query: 332 LDLAVDYIKDLQKQFKTLSEKRAKCKC 358
L+ AV+Y+K LQ Q + L+E++ +CKC
Sbjct: 227 LEEAVEYVKALQSQIQELTEQQKRCKC 253
>AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17931680-17935639 REVERSE
LENGTH=309
Length = 309
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
Query: 251 SQVHTLTHHLSLPKTSAEMAAMDKLLQFP-DSVPCKIRAKRGCATHPRSIAERVRRTRIS 309
S TL S+P+T+ EMA M+ L+ P DSVPC+ RAKRG ATHPRSIAER RRTRIS
Sbjct: 195 SDFFTLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRIS 254
Query: 310 ERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTLSEKRAKCKCVSTQK 363
+++KLQELVPNMDKQT+ +DMLDLAV++IK LQ Q ++L + +C C + +K
Sbjct: 255 GKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVESLEKGMERCTCGACKK 308
>AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1744843-1747427 FORWARD
LENGTH=362
Length = 362
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Query: 256 LTHHLSLPKTSAEMAAMDKLLQFP-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRK 314
L SLP ++ M MD +Q P DSVPCKIRAKRGCATHPRSIAER RRTRIS +++K
Sbjct: 253 LFSQYSLPSDTS-MNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKK 311
Query: 315 LQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTLSEKRAKCKCVSTQK 363
LQ+LVPNMDKQT+ SDMLDLAV +IK LQ Q + L + + C C ++K
Sbjct: 312 LQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEK 360
>AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:5847513-5849500 FORWARD
LENGTH=262
Length = 262
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
Query: 229 GLKRGRSGNERMFSELQNGELGSQVHTLTHHLSLPKTSAEMAAMDKLLQFPDSVPCKIRA 288
G KR R E +FS + E SQ+ +P + M+ M+ DSV ++RA
Sbjct: 131 GSKRSRE-MEALFS---SPEFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRA 186
Query: 289 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKT 348
KRGCATHPRSIAERVRRTRIS+R+RKLQELVPNMDKQTNT+DML+ AV+Y+K LQ+Q +
Sbjct: 187 KRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQE 246
Query: 349 LSEKRAKCKCV 359
L+E++ +C C+
Sbjct: 247 LTEEQKRCTCI 257
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 284 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 343
KIRA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 136 TKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQ 194
Query: 344 KQFKTLSEKR-AKCKCVSTQKAE 365
Q K LS R VS+Q +E
Sbjct: 195 LQVKVLSMSRLGGAASVSSQISE 217
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 285 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 344
K+RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ + MLD +DY+K LQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 345 QFKTLSEKR 353
Q K LS R
Sbjct: 188 QVKVLSMSR 196
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 285 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 344
++RA+RG AT P SIAER+RR RI+ERM+ LQELVPN +K T+ + MLD ++Y++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 345 QFKTLSEKR 353
Q K LS R
Sbjct: 157 QVKVLSMSR 165
>AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting
basic-helix-loop-helix 1 | chr4:16498466-16499946
FORWARD LENGTH=335
Length = 335
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT SIAERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ+Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 346 FKTLSEKRA 354
+ LS K A
Sbjct: 232 IEFLSMKLA 240
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT+ S+AERVRR +ISERMR LQELVP +K T + MLD ++Y++ LQ+Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 346 FKTLSEKRA 354
+ LS K A
Sbjct: 266 VEFLSMKLA 274
>AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=485
Length = 485
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 302 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 361
Query: 346 FKTLSEKRAKC 356
+ LS K A
Sbjct: 362 VEFLSMKLATV 372
>AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 346 FKTLSEKRAKC 356
+ LS K A
Sbjct: 363 VEFLSMKLATV 373
>AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 346 FKTLSEKRAKC 356
+ LS K A
Sbjct: 363 VEFLSMKLATV 373
>AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AERVRR +ISERMR LQ LVP DK T + MLD ++Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQ 195
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 196 VEFLSMK 202
>AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AERVRR +ISERMR LQ LVP DK T + MLD ++Y++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQ 195
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 196 VEFLSMK 202
>AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:2341188-2343288 REVERSE
LENGTH=456
Length = 456
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 318 VEFLSMK 324
>AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 223 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 282
Query: 346 FKTLSEKRAKCKCV 359
+ LS K + V
Sbjct: 283 IEFLSMKLSAVNPV 296
>AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 223 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 282
Query: 346 FKTLSEKRAKCKCV 359
+ LS K + V
Sbjct: 283 IEFLSMKLSAVNPV 296
>AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:8880515-8882018 REVERSE
LENGTH=223
Length = 223
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 277 QFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAV 336
Q P V +RAKRG AT S+AERVRR +I+ER++ LQ+LVP K + MLD+ +
Sbjct: 96 QKPKDV-VHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154
Query: 337 DYIKDLQKQFKTLSEK-RAKCKCVSTQKAETNP 368
DY++ LQ Q + LS K A C + P
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLNSLDIEP 187
>AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=339
Length = 339
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT+ S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 172 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 231
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 232 IEFLSMK 238
>AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:19684160-19686871 FORWARD
LENGTH=498
Length = 498
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AERVRR +I ERM+ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 301 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 360
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 361 VEFLSMK 367
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AER RR +ISERM LQ+LVP ++ T + MLD ++Y++ LQ+Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 346 FKTLSEKRA 354
+ LS K A
Sbjct: 251 VEFLSMKLA 259
>AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17621542-17624635 FORWARD
LENGTH=327
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 280 DSVP-CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDY 338
D +P +RA+RG AT S+AER RR +I+ RM+ LQELVP DK T+ +LD +++
Sbjct: 178 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 237
Query: 339 IKDLQKQFKTLSEKRAKC 356
++ LQ+Q + LS + A
Sbjct: 238 VQTLQRQVEMLSMRLAAV 255
>AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=260
Length = 260
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT SIAERVRR +I+ER++ LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 346 FKTLSEKRAKCKCVSTQKAETNPI 369
+ LS K +ET+ +
Sbjct: 207 VEFLSMKLTAASSYYDFNSETDAV 230
>AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=261
Length = 261
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT SIAERVRR +I+ER++ LQ++VP K + MLD ++Y++ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 346 FKTLSEKRAKCKCVSTQKAETNPI 369
+ LS K +ET+ +
Sbjct: 207 VEFLSMKLTAASSYYDFNSETDAV 230
>AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 |
chr1:6331464-6333576 FORWARD LENGTH=260
Length = 260
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 284 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 343
+RA+RG AT S+AERVRR +I+ER+R LQ++VP K + MLD ++Y++ LQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 344 KQFKTLSEKRAKCKCVSTQKAETNPI 369
Q + LS K +ET+ +
Sbjct: 203 NQVEFLSMKLTAASSFYDFNSETDAV 228
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 196 VEFLSMK 202
>AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=379
Length = 379
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 284 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQ 343
+RA+RG AT S+AER RR +I+ RM+ LQELVP DK T+ +LD +++++ LQ
Sbjct: 202 VHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQ 261
Query: 344 KQFKTLSEKRAKC 356
+Q + LS + A
Sbjct: 262 RQVEMLSMRLAAV 274
>AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=302
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 276 LQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLA 335
+Q PD + +RA+RG AT S+AER RR +IS++M+ LQ++VP +K T + MLD
Sbjct: 133 IQKPDYI--HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 336 VDYIKDLQKQFKTLSEK 352
++Y++ LQ+Q + LS K
Sbjct: 191 INYVQSLQQQVEFLSMK 207
>AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=304
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 276 LQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLA 335
+Q PD + +RA+RG AT S+AER RR +IS++M+ LQ++VP +K T + MLD
Sbjct: 133 IQKPDYI--HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEI 190
Query: 336 VDYIKDLQKQFKTLSEK 352
++Y++ LQ+Q + LS K
Sbjct: 191 INYVQSLQQQVEFLSMK 207
>AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=335
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T + MLD ++Y++ LQ+Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 346 FKTLSEKRA 354
+ LS K A
Sbjct: 245 VEFLSMKLA 253
>AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=337
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T + MLD ++Y++ LQ+Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 346 FKTLSEKRA 354
+ LS K A
Sbjct: 245 VEFLSMKLA 253
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 196 VEFLSMK 202
>AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 |
chr4:16239566-16241052 REVERSE LENGTH=352
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 285 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 344
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + S ML+ AV Y+K LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 345 QFKTLS 350
Q K LS
Sbjct: 324 QIKLLS 329
>AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7952546-7954446 REVERSE
LENGTH=364
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AER RR +IS++M+ LQ++VP +K T + MLD ++Y++ LQ+Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 346 FKTLSEKRA 354
+ LS K A
Sbjct: 245 VEFLSMKLA 253
>AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=328
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 285 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 344
K RA RG AT P+S+ R RR RI+ER+R LQ LVPN K + S ML+ AV Y+K LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 345 QFKTLS 350
Q K LS
Sbjct: 295 QIKLLS 300
>AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 |
chr1:9654753-9655806 FORWARD LENGTH=258
Length = 258
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 281 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIK 340
SV K RA +G AT P+S+ R RR +I+ER++ LQ LVPN K + S ML+ AV Y+K
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVK 220
Query: 341 DLQKQFKTLS 350
LQ Q K LS
Sbjct: 221 FLQLQIKLLS 230
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+RA+RG AT S+AER RR +ISE+M LQ+++P +K + +LD ++YI+ LQ+Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 346 FKTLSEK 352
+ LS K
Sbjct: 213 VEFLSMK 219
>AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 279 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDY 338
P S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ + M+D VDY
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDY 197
Query: 339 IKDLQKQFKTLSEKR 353
+K L+ Q K LS R
Sbjct: 198 VKFLRLQVKVLSMSR 212
>AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 279 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDY 338
P S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ + M+D VDY
Sbjct: 139 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDY 197
Query: 339 IKDLQKQFKTLSEKR 353
+K L+ Q K LS R
Sbjct: 198 VKFLRLQVKVLSMSR 212
>AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140117
REVERSE LENGTH=247
Length = 247
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 279 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDY 338
P S+ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ + M+D VDY
Sbjct: 76 PTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDY 134
Query: 339 IKDLQKQFKTLSEKR 353
+K L+ Q K LS R
Sbjct: 135 VKFLRLQVKVLSMSR 149
>AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:17334261-17335234 FORWARD
LENGTH=223
Length = 223
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 281 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIK 340
S+ K +A RG A+ P+S+ R RR RI++R++ LQ LVPN K + S ML+ AV Y+K
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 341 DLQKQFKTLS 350
LQ Q K LS
Sbjct: 186 FLQLQIKLLS 195
>AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=302
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 285 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 344
++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ + M+D VDY+K L+
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 201
Query: 345 QFKTLSEKR 353
Q K LS R
Sbjct: 202 QVKVLSMSR 210
>AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=297
Length = 297
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 285 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 344
++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ + M+D VDY+K L+
Sbjct: 138 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 196
Query: 345 QFKTLSEKR 353
Q K LS R
Sbjct: 197 QVKVLSMSR 205
>AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=341
Length = 341
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 285 KIRAKRGCATHPRSIAERV-------------RRTRISERMRKLQELVPNMDKQTNTSDM 331
K RA RG AT P+S+ R+ RR RI+ER+R LQ LVPN K + S M
Sbjct: 236 KTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTK-VDISTM 294
Query: 332 LDLAVDYIKDLQKQFKTLS 350
L+ AV Y+K LQ Q K LS
Sbjct: 295 LEEAVQYVKFLQLQIKLLS 313
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+ +KR + +++ER RR RI+E+MR LQEL+PN +K + + MLD A++Y+K LQ Q
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQ 395
Query: 346 FKTLS 350
+ +S
Sbjct: 396 VQIMS 400
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 345
+ +KR + +++ER RR RI+E+MR LQEL+PN +K + + MLD A++Y+K LQ Q
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQ 395
Query: 346 FKTLS 350
+ +S
Sbjct: 396 VQIMS 400
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 289 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKT 348
KR A +++ER RR RI+ERM+ LQEL+P +K ++ + MLD A++Y+K LQ Q +
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 268
Query: 349 LS 350
+S
Sbjct: 269 MS 270
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 289 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKT 348
KR A +++ER RR RI+ERM+ LQEL+P +K ++ + MLD A++Y+K LQ Q +
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 349 LS 350
+S
Sbjct: 340 MS 341
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 289 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKT 348
KR A +++ER RR RI+ERM+ LQEL+P +K ++ + MLD A++Y+K LQ Q +
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 349 LS 350
+S
Sbjct: 340 MS 341
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 289 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKT 348
KR +++E+ RR++I+E+M+ LQ+L+PN +K T+ + MLD A++Y+K LQ Q +T
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 349 LS 350
L+
Sbjct: 149 LA 150
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 293 ATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTLSEK 352
+T P+++A R RR RISE++R LQ LVP K +T+ MLD A +Y+K L+ Q K L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 334
Query: 353 RAK 355
R K
Sbjct: 335 RPK 337
>AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 |
chr5:15036197-15037574 FORWARD LENGTH=307
Length = 307
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 296 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTLS 350
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLA 264
>AT5G33210.1 | Symbols: SRS8 | SHI-related sequence 8 |
chr5:12465057-12465713 REVERSE LENGTH=173
Length = 173
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%), Gaps = 2/31 (6%)
Query: 272 MDKLLQFPDSVPCKIRAKRGCATHPRSIAER 302
M+K+ F DSVPC++RAKRGCATHPRSIAER
Sbjct: 5 MEKI--FEDSVPCRVRAKRGCATHPRSIAER 33
>AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 |
chr1:24795326-24796598 FORWARD LENGTH=298
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 296 PRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTLS 350
P+S+A + RR RISER++ LQELVPN K + ML+ A+ Y+K LQ Q K L+
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLA 258
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 290 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTL 349
R H +++E+ RR+RI+E+M+ LQ L+PN +K T+ + MLD A++Y+K LQ Q + L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
Query: 350 S 350
+
Sbjct: 254 T 254
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 290 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKTL 349
R A H +S ER RR +I++RM+ LQ+LVPN K T+ + MLD ++Y+K LQ Q +
Sbjct: 213 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSMM 269
Query: 350 S 350
S
Sbjct: 270 S 270
>AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=426
Length = 426
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 286 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDY 338
+RA+RG AT S+AER RR +I+ RM+ LQELVP DK T+ + + V +
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCF 256
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 289 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFKT 348
KR ++AER RR +I+E+M+ LQ+L+P +K T S LD A++Y+K LQ Q +
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVS-TLDDAIEYVKSLQSQIQG 310
Query: 349 L 349
+
Sbjct: 311 M 311
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 288 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFK 347
+KR A ++ER RR +I+E M+ LQEL+P K T+ S MLD ++Y+K LQ Q +
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 348 TLS 350
S
Sbjct: 332 MFS 334
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 289 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQF 346
KR A ++AER RR +I+ERM+ LQ+L+P +K T S ML+ ++Y+K L+ Q
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQI 203
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 288 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQFK 347
+KR A ++ER RR +I+E M+ LQEL+P K T+ S MLD ++Y+K LQ Q +
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331