Miyakogusa Predicted Gene

Lj0g3v0131779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131779.1 Non Chatacterized Hit- tr|G7JGH1|G7JGH1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,66.67,2e-18,ALMT,Aluminum-activated malate
transporter,CUFF.8014.1
         (84 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17970.1 | Symbols: ALMT12, ATALMT12 | aluminum-activated, ma...    75   1e-14
AT5G46610.1 | Symbols:  | Aluminium activated malate transporter...    73   5e-14
AT5G46610.2 | Symbols:  | Aluminium activated malate transporter...    72   6e-14
AT5G46610.3 | Symbols:  | Aluminium activated malate transporter...    72   7e-14
AT5G46600.1 | Symbols:  | Aluminium activated malate transporter...    62   7e-11

>AT4G17970.1 | Symbols: ALMT12, ATALMT12 | aluminum-activated,
           malate transporter 12 | chr4:9975482-9977722 FORWARD
           LENGTH=560
          Length = 560

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 45/61 (73%)

Query: 1   MRLAAKVSKVLREVAGNIRSCHQCSPETLSDHLHDTLQDVNAAIKSQPPLFLGSNNSQAN 60
           +RLA +V K L E+A +I +   CSPE LSDHLH  LQD+N+AIKSQP LFLGSN  + N
Sbjct: 331 VRLAGEVCKALTELADSISNHRHCSPEILSDHLHVALQDLNSAIKSQPKLFLGSNLHRHN 390

Query: 61  N 61
           N
Sbjct: 391 N 391


>AT5G46610.1 | Symbols:  | Aluminium activated malate transporter
           family protein | chr5:18913115-18915736 REVERSE
           LENGTH=543
          Length = 543

 Score = 72.8 bits (177), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 1   MRLAAKVSKVLREVAGNIRSCHQCSPETLSDHLHDTLQDVNAAIKSQPPLFLGSNNSQAN 60
           +RLA ++ KVL E+A +IR+   CSPE LSD L   LQD+N AIKSQP LFLGS+    N
Sbjct: 336 VRLAGEICKVLSELAASIRNRRHCSPEILSDSLQVALQDLNTAIKSQPKLFLGSSQ---N 392

Query: 61  NNMFTVAAAAQTTHIYLFQDINK 83
            N+    +     ++ + Q INK
Sbjct: 393 GNVSQGNSGRHNPNVAVSQHINK 415


>AT5G46610.2 | Symbols:  | Aluminium activated malate transporter
           family protein | chr5:18913115-18915736 REVERSE
           LENGTH=519
          Length = 519

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 1   MRLAAKVSKVLREVAGNIRSCHQCSPETLSDHLHDTLQDVNAAIKSQPPLFLGSNNSQAN 60
           +RLA ++ KVL E+A +IR+   CSPE LSD L   LQD+N AIKSQP LFLGS+    N
Sbjct: 312 VRLAGEICKVLSELAASIRNRRHCSPEILSDSLQVALQDLNTAIKSQPKLFLGSSQ---N 368

Query: 61  NNMFTVAAAAQTTHIYLFQDINK 83
            N+    +     ++ + Q INK
Sbjct: 369 GNVSQGNSGRHNPNVAVSQHINK 391


>AT5G46610.3 | Symbols:  | Aluminium activated malate transporter
           family protein | chr5:18913115-18915736 REVERSE
           LENGTH=496
          Length = 496

 Score = 72.0 bits (175), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 1   MRLAAKVSKVLREVAGNIRSCHQCSPETLSDHLHDTLQDVNAAIKSQPPLFLGSNNSQAN 60
           +RLA ++ KVL E+A +IR+   CSPE LSD L   LQD+N AIKSQP LFLGS+    N
Sbjct: 289 VRLAGEICKVLSELAASIRNRRHCSPEILSDSLQVALQDLNTAIKSQPKLFLGSSQ---N 345

Query: 61  NNMFTVAAAAQTTHIYLFQDINK 83
            N+    +     ++ + Q INK
Sbjct: 346 GNVSQGNSGRHNPNVAVSQHINK 368


>AT5G46600.1 | Symbols:  | Aluminium activated malate transporter
           family protein | chr5:18907849-18910742 REVERSE
           LENGTH=539
          Length = 539

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/55 (52%), Positives = 40/55 (72%)

Query: 1   MRLAAKVSKVLREVAGNIRSCHQCSPETLSDHLHDTLQDVNAAIKSQPPLFLGSN 55
           +RLA ++ KVL E++ +I++   CS E LSD L   L+D+N+ IKSQP LFLGSN
Sbjct: 340 VRLAGEICKVLSELSESIQNRRHCSSEILSDSLEAALKDLNSTIKSQPKLFLGSN 394