Miyakogusa Predicted Gene

Lj0g3v0131519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131519.1 Non Chatacterized Hit- tr|I1KIG2|I1KIG2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37538
PE,80,0,coiled-coil,NULL; no description,RAP domain; seg,NULL; RAP,RAP
domain; SUBFAMILY NOT NAMED,NULL; FAS,CUFF.8003.1
         (670 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31890.1 | Symbols: ATRAP, RAP | RAP | chr2:13557100-13559715...   706   0.0  

>AT2G31890.1 | Symbols: ATRAP, RAP | RAP | chr2:13557100-13559715
           REVERSE LENGTH=671
          Length = 671

 Score =  706 bits (1823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/579 (63%), Positives = 446/579 (77%), Gaps = 13/579 (2%)

Query: 85  FVGELDPFGYRAPKKRAKEQRSELLKETEEMDWCVRARKMAMKSIEARGMAYAIEDLVTV 144
           F+GE+DP   + PKKR K++ S+ L++TE MDWCVRARK+A+KSIEARG++  + +++ +
Sbjct: 102 FLGEIDPLDIQPPKKRKKQKNSKALEDTEGMDWCVRARKIALKSIEARGLSSRMAEVMPL 161

Query: 145 XXXXXXXXXXXXXXXXXXXXXX----ETEDDLDYNSDEDFMLSEAMQPVNDVGDLKTKVS 200
                                     + + + +    ED  + + M      GDL+ +VS
Sbjct: 162 KKKKKKKSKKVIVKKDKVKSKSIPEDDFDTEDEDLDFEDGFVEDKM------GDLRKRVS 215

Query: 201 MMANGMFAEKREKTMEEFVNKLSQFSGPSDHRKEFNLNKSIVEAQTAEDVLEVTYETISA 260
            +A GMF EK+EK  E+   +LSQFSGPSD  KE NLNK+I+EAQTAE+VLEVT ETI A
Sbjct: 216 SLAGGMFEEKKEKMKEQLAQRLSQFSGPSDRMKEINLNKAIIEAQTAEEVLEVTAETIMA 275

Query: 261 VMKGLSPSPLSPLNIATSLHRIAKNMEKVSMLQTRRLAFARQREMSMLVGIAMTALPECS 320
           V KGLSPSPLSPLNIAT+LHRIAKNMEKVSM++TRRLAFARQREMSMLV +AMT LPECS
Sbjct: 276 VAKGLSPSPLSPLNIATALHRIAKNMEKVSMMRTRRLAFARQREMSMLVALAMTCLPECS 335

Query: 321 GQGISNISWALSKIGGELLYHSEMDRVAEVALTKVEEFNSQNSANIAGAFAAMQHPAPEL 380
            QGISNISWALSKIGGELLY +EMDRVAEVA +KV EFNSQN ANIAGAFA+M+H APEL
Sbjct: 336 AQGISNISWALSKIGGELLYLTEMDRVAEVATSKVGEFNSQNVANIAGAFASMRHSAPEL 395

Query: 381 FSLLSKRASNIIHTFKEQELAQLLWAFASLFEPADPIFDSLDEVFKDHCQLRGFTGEKTS 440
           F+ LSKRAS II+TFK QE+AQLLW+FASL+EPADP+ +SLD  FK   Q + +  ++ +
Sbjct: 396 FAELSKRASTIINTFKGQEIAQLLWSFASLYEPADPLLESLDSAFKSSDQFKCYLTKEIT 455

Query: 441 NDYEQNRADRSRDSNGSPGSSVLTLSRDQLATIAWSYAVFGQLNRSFFSYVWKTLSHYEE 500
           N  E   A+ S D + SP    L+ +RDQL  IAWSYAV GQ+ R FF+ +W TL+  EE
Sbjct: 456 NSDEVVDAEVSDDVSRSPA---LSFNRDQLGNIAWSYAVLGQVERPFFANIWNTLTTLEE 512

Query: 501 QKLSELYREDMMFASQVHLVNQCLKLEFPHLQLSLCGELEDKVSLAGKTKRFNQKITSSF 560
           Q+LSE YRED+MFASQV+LVNQCLKLE PHLQLSLC ELE+K+S AGKTKRFNQKITSSF
Sbjct: 513 QRLSEQYREDVMFASQVYLVNQCLKLECPHLQLSLCQELEEKISRAGKTKRFNQKITSSF 572

Query: 561 QKEVGRLLVSTGLEWVKEYVVDGYTLDAVIVDKKLALEIDGPTHFSRNTGVPLGHTMLKR 620
           QKEVGRLL+STGL+W KE+ VDGYT+D  +V+KK+ALEIDGPTHFSRN+G+PLGHTMLKR
Sbjct: 573 QKEVGRLLISTGLDWAKEHDVDGYTVDVALVEKKVALEIDGPTHFSRNSGLPLGHTMLKR 632

Query: 621 RYITAAGWDVISVSHQEWEELQGEFEQVEYLKNILKSHI 659
           RY+ AAGW V+S+S QEWEE +G  EQ+EYL+ IL   I
Sbjct: 633 RYVAAAGWKVVSLSLQEWEEHEGSHEQLEYLREILTGCI 671