Miyakogusa Predicted Gene

Lj0g3v0131499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131499.1 Non Chatacterized Hit- tr|B9FX39|B9FX39_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,44.95,7e-19,no
description,NULL; 4HBT,Thioesterase superfamily; Thioesterase/thiol
ester dehydrase-isomerase,NUL,CUFF.7994.1
         (182 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61200.1 | Symbols:  | Thioesterase superfamily protein | chr...   126   9e-30
AT1G04290.1 | Symbols:  | Thioesterase superfamily protein | chr...    72   2e-13

>AT3G61200.1 | Symbols:  | Thioesterase superfamily protein |
           chr3:22657599-22658350 REVERSE LENGTH=188
          Length = 188

 Score =  126 bits (316), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 98/160 (61%), Gaps = 7/160 (4%)

Query: 26  LDPRHASETLTFVTRMGGGVSIPQNCNTNGFYDAFIRSF---IKVDHIQRGRISCTIIAK 82
           +DP +    +  V      +S  ++CN    +D+F   F    +   I RGR+SC++   
Sbjct: 33  IDPNY----VLMVADFFKAISPDESCNDFTSFDSFSVLFQNNTRALSIARGRVSCSVTVT 88

Query: 83  PPICNGYGTLHGGAVGVLVEVLSTACARTVVAEDKQISLGEVSISYLSGTPANEEVLANA 142
           P I N +  LHGGAV  + E ++ AC +TVV+EDK + +GE+S+SYLS  P + E+L   
Sbjct: 89  PGISNFFKGLHGGAVASIAERVAMACVKTVVSEDKHLFIGELSMSYLSSAPISSELLVEG 148

Query: 143 SVVKTGRNLTVVALEFKSKKNGNLLYITHATFYNMPVSSL 182
           +VV+TGRNL+VV +EFK K+   + Y++ ATFY+ P+S L
Sbjct: 149 TVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYHSPISKL 188


>AT1G04290.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:1147721-1148352 REVERSE LENGTH=155
          Length = 155

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 1/127 (0%)

Query: 56  FYDAFIRSFIKVDHIQRGRISCTIIAKPPICNGYGTLHGGAVGVLVEVLSTACARTVVAE 115
           F + F+ + +KVD I+ GRI C++   P + N    LHGGA   LV+++ +A   T  A 
Sbjct: 30  FLERFVTNGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGAS 89

Query: 116 DKQISLGEVSISYLSGTPANEEVLANASVVKTGRNLTVVALEFKSKKNGNLLYITHATFY 175
              +S+ E+++SYL     +EE+   +  ++ G+ + VV++E + K  G ++     T Y
Sbjct: 90  HSGVSV-EINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRHTKY 148

Query: 176 NMPVSSL 182
             P S+L
Sbjct: 149 FAPRSNL 155