Miyakogusa Predicted Gene
- Lj0g3v0130899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0130899.1 Non Chatacterized Hit- tr|C5WSH9|C5WSH9_SORBI
Putative uncharacterized protein Sb01g029480
OS=Sorghu,36.14,7e-17,seg,NULL; PH,Pleckstrin homology domain; no
description,Pleckstrin homology-like domain; PH_DOMAIN,P,CUFF.7944.1
(402 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13170.1 | Symbols: ORP1D | OSBP(oxysterol binding protein)-r... 410 e-114
AT1G13170.2 | Symbols: ORP1D | OSBP(oxysterol binding protein)-r... 409 e-114
AT4G08180.1 | Symbols: ORP1C | OSBP(oxysterol binding protein)-r... 256 2e-68
AT4G08180.3 | Symbols: ORP1C | OSBP(oxysterol binding protein)-r... 252 3e-67
AT4G08180.2 | Symbols: ORP1C | OSBP(oxysterol binding protein)-r... 252 3e-67
AT2G31020.1 | Symbols: ORP1A | OSBP(oxysterol binding protein)-r... 226 2e-59
AT1G77730.1 | Symbols: | Pleckstrin homology (PH) domain superf... 191 7e-49
AT4G22540.1 | Symbols: ORP2A | OSBP(oxysterol binding protein)-r... 170 2e-42
AT4G12460.1 | Symbols: ORP2B | OSBP(oxysterol binding protein)-r... 166 4e-41
>AT1G13170.1 | Symbols: ORP1D | OSBP(oxysterol binding
protein)-related protein 1D | chr1:4488826-4492278
REVERSE LENGTH=816
Length = 816
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/413 (54%), Positives = 274/413 (66%), Gaps = 21/413 (5%)
Query: 1 MNPLCCIAPVSIDRDRPNPVVTKSPGQCQLGLDSTVRTTVNCAFRSVSSAQDSSLAGGDS 60
MNPLCCIAPVSID DR NPVV KS LGL++ V+ S + +S D
Sbjct: 1 MNPLCCIAPVSID-DRTNPVVAKSSNH-HLGLEAI---PVSKHASKPSFSTQASWISQDQ 55
Query: 61 VK--SSTAHDDNDEEPRDSKVFA-----------GGGGSVAGILYKWVNYGKGWRSRWFV 107
++ SS DD + + +D+ + G G VAGI+YKWVNYGKGWR+RWF
Sbjct: 56 LERLSSEVVDDVNLDGKDASSSSNKGCFFFGNCVGAGAGVAGIMYKWVNYGKGWRARWFE 115
Query: 108 LEDGVLSYYKIHGPDKILMSPAKDRGVRVIGEESSKFVKKANWNLNRXXXXXXXXXXTKQ 167
LEDGVLSYYKIHGPDKI+M+P++++GVRVIGEES ++++KA+ + ++
Sbjct: 116 LEDGVLSYYKIHGPDKIVMNPSREKGVRVIGEESVRYIRKASCG-SSNRLGASAVAASRP 174
Query: 168 CKPFGEIHXXXXXXXXXXXXXXXXXIFTGTKTLHLRCVSREDRAMWIEALQCAKDLFPRA 227
CKPFGEIH IFTGTKTLHLRCVS+E+RA W+EA Q AKDLFPR
Sbjct: 175 CKPFGEIHLKVSSIRASKSDDKRLAIFTGTKTLHLRCVSKENRAAWVEAFQVAKDLFPR- 233
Query: 228 LTSGDLATSEDIVVSTEKLRSRLSQEGINEAIISDCESIMLSEVSYLQGKFKFLQQKHFM 287
+ SGD+ SED VVSTEKLR +L QEG+ E ++ DCE+IMLSEVS LQ + K L KH +
Sbjct: 234 VASGDILPSEDAVVSTEKLREKLLQEGVGETVVKDCEAIMLSEVSVLQNRLKVLTHKHII 293
Query: 288 LLDTLKQLETEKIELETTVVDETKERESYCGQVNRRFSDFYSVLSEGSATDSVADNESQX 347
LLDTL+QLETEKIELE TVVDETKE +S CGQ RRFSDFYSV+SE SA+DS ADNESQ
Sbjct: 294 LLDTLRQLETEKIELEATVVDETKEHDSCCGQ-GRRFSDFYSVMSEVSASDSEADNESQD 352
Query: 348 XXXXXXXXXXXXXXXXNEILYSDALRSASYRSREGIGNGSIYDRDYILYDGLH 400
N+IL ++A+RSASYRSRE GNGSIYD+D D L
Sbjct: 353 GADVESDEDDVPYFDTNDILSAEAMRSASYRSREAEGNGSIYDKDPFFSDRLQ 405
>AT1G13170.2 | Symbols: ORP1D | OSBP(oxysterol binding
protein)-related protein 1D | chr1:4488826-4492278
REVERSE LENGTH=837
Length = 837
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/413 (54%), Positives = 274/413 (66%), Gaps = 21/413 (5%)
Query: 1 MNPLCCIAPVSIDRDRPNPVVTKSPGQCQLGLDSTVRTTVNCAFRSVSSAQDSSLAGGDS 60
MNPLCCIAPVSID DR NPVV KS LGL++ V+ S + +S D
Sbjct: 1 MNPLCCIAPVSID-DRTNPVVAKSSNH-HLGLEAI---PVSKHASKPSFSTQASWISQDQ 55
Query: 61 VK--SSTAHDDNDEEPRDSKVFA-----------GGGGSVAGILYKWVNYGKGWRSRWFV 107
++ SS DD + + +D+ + G G VAGI+YKWVNYGKGWR+RWF
Sbjct: 56 LERLSSEVVDDVNLDGKDASSSSNKGCFFFGNCVGAGAGVAGIMYKWVNYGKGWRARWFE 115
Query: 108 LEDGVLSYYKIHGPDKILMSPAKDRGVRVIGEESSKFVKKANWNLNRXXXXXXXXXXTKQ 167
LEDGVLSYYKIHGPDKI+M+P++++GVRVIGEES ++++KA+ + ++
Sbjct: 116 LEDGVLSYYKIHGPDKIVMNPSREKGVRVIGEESVRYIRKASCG-SSNRLGASAVAASRP 174
Query: 168 CKPFGEIHXXXXXXXXXXXXXXXXXIFTGTKTLHLRCVSREDRAMWIEALQCAKDLFPRA 227
CKPFGEIH IFTGTKTLHLRCVS+E+RA W+EA Q AKDLFPR
Sbjct: 175 CKPFGEIHLKVSSIRASKSDDKRLAIFTGTKTLHLRCVSKENRAAWVEAFQVAKDLFPR- 233
Query: 228 LTSGDLATSEDIVVSTEKLRSRLSQEGINEAIISDCESIMLSEVSYLQGKFKFLQQKHFM 287
+ SGD+ SED VVSTEKLR +L QEG+ E ++ DCE+IMLSEVS LQ + K L KH +
Sbjct: 234 VASGDILPSEDAVVSTEKLREKLLQEGVGETVVKDCEAIMLSEVSVLQNRLKVLTHKHII 293
Query: 288 LLDTLKQLETEKIELETTVVDETKERESYCGQVNRRFSDFYSVLSEGSATDSVADNESQX 347
LLDTL+QLETEKIELE TVVDETKE +S CGQ RRFSDFYSV+SE SA+DS ADNESQ
Sbjct: 294 LLDTLRQLETEKIELEATVVDETKEHDSCCGQ-GRRFSDFYSVMSEVSASDSEADNESQD 352
Query: 348 XXXXXXXXXXXXXXXXNEILYSDALRSASYRSREGIGNGSIYDRDYILYDGLH 400
N+IL ++A+RSASYRSRE GNGSIYD+D D L
Sbjct: 353 GADVESDEDDVPYFDTNDILSAEAMRSASYRSREAEGNGSIYDKDPFFSDRLQ 405
>AT4G08180.1 | Symbols: ORP1C | OSBP(oxysterol binding
protein)-related protein 1C | chr4:5169727-5173360
FORWARD LENGTH=814
Length = 814
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 172/273 (63%), Gaps = 10/273 (3%)
Query: 72 EEPRDSKVFAGGGGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKD 131
E P D K+ G +AGILYKWVNYG+GWR RWFVL+DGVLSYYKIHGPDKI +SP +
Sbjct: 91 EPPVDVKINDIVGNGIAGILYKWVNYGRGWRPRWFVLQDGVLSYYKIHGPDKIFVSPETE 150
Query: 132 RGVRVIGEESSKFVKKANWNLNRXXXXXXXXXXTKQCKPFGEIHXXXXXXXXXXXXXXXX 191
+G +VIG+ES++ + + N + KPFGE+H
Sbjct: 151 KGSKVIGDESARMISRHN------RRGGSSSSCQLRRKPFGEVHLKVSSVRESRSDDKRF 204
Query: 192 XIFTGTKTLHLRCVSREDRAMWIEALQCAKDLFPRALTSGDLATSEDIVVSTEKLRSRLS 251
IFTGTK LHLR +REDR W+EALQ KD+FPR S +A + ++ +STEK+R RL
Sbjct: 205 SIFTGTKRLHLRAETREDRTTWVEALQAVKDMFPRMSNSELMAPTNNLAMSTEKIRLRLI 264
Query: 252 QEGINEAIISDCESIMLSEVSYLQGKFKFLQQKHFMLLDTLKQLETEKIELETTVVDETK 311
+EG++E I DCE IM SE S LQ + L+QK ++L+DTL+QLETEK++LE TVVDE++
Sbjct: 265 EEGVSELAIQDCEQIMKSEFSALQSQLVLLKQKQWLLIDTLRQLETEKVDLENTVVDESQ 324
Query: 312 ERESYCGQVNRRFSDFYSVLSEGSATDSVADNE 344
+ R F SEG+AT+S DNE
Sbjct: 325 RQADNGCSGELRHEKF----SEGTATESDDDNE 353
>AT4G08180.3 | Symbols: ORP1C | OSBP(oxysterol binding
protein)-related protein 1C | chr4:5169727-5173360
FORWARD LENGTH=813
Length = 813
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 11/273 (4%)
Query: 72 EEPRDSKVFAGGGGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKD 131
E P D K+ G +AGILYKWVNYG+GWR RWFVL+DGVLSYYKIHGPDKI +SP +
Sbjct: 91 EPPVDVKINDIVGNGIAGILYKWVNYGRGWRPRWFVLQDGVLSYYKIHGPDKIFVSPETE 150
Query: 132 RGVRVIGEESSKFVKKANWNLNRXXXXXXXXXXTKQCKPFGEIHXXXXXXXXXXXXXXXX 191
+G +VIG+ES++ + + N + KPFGE+H
Sbjct: 151 KGSKVIGDESARMISRHN------RRGGSSSSCQLRRKPFGEVHLKVSSVRESRSDDKRF 204
Query: 192 XIFTGTKTLHLRCVSREDRAMWIEALQCAKDLFPRALTSGDLATSEDIVVSTEKLRSRLS 251
IFTGTK LHLR +REDR W+EALQ KD+FPR S +A + ++ +STEK+R RL
Sbjct: 205 SIFTGTKRLHLRAETREDRTTWVEALQAVKDMFPRMSNSELMAPTNNLAMSTEKIRLRLI 264
Query: 252 QEGINEAIISDCESIMLSEVSYLQGKFKFLQQKHFMLLDTLKQLETEKIELETTVVDETK 311
+EG++E I DCE IM SE S LQ + L+QK ++L+DTL+QLETEK++LE TVVDE++
Sbjct: 265 EEGVSELAIQDCEQIMKSEFSALQSQLVLLKQKQWLLIDTLRQLETEKVDLENTVVDESQ 324
Query: 312 ERESYCGQVNRRFSDFYSVLSEGSATDSVADNE 344
+ R F G+AT+S DNE
Sbjct: 325 RQADNGCSGELRHEKF-----SGTATESDDDNE 352
>AT4G08180.2 | Symbols: ORP1C | OSBP(oxysterol binding
protein)-related protein 1C | chr4:5169727-5173360
FORWARD LENGTH=813
Length = 813
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 170/273 (62%), Gaps = 11/273 (4%)
Query: 72 EEPRDSKVFAGGGGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKD 131
E P D K+ G +AGILYKWVNYG+GWR RWFVL+DGVLSYYKIHGPDKI +SP +
Sbjct: 91 EPPVDVKINDIVGNGIAGILYKWVNYGRGWRPRWFVLQDGVLSYYKIHGPDKIFVSPETE 150
Query: 132 RGVRVIGEESSKFVKKANWNLNRXXXXXXXXXXTKQCKPFGEIHXXXXXXXXXXXXXXXX 191
+G +VIG+ES++ + + N + KPFGE+H
Sbjct: 151 KGSKVIGDESARMISRHN------RRGGSSSSCQLRRKPFGEVHLKVSSVRESRSDDKRF 204
Query: 192 XIFTGTKTLHLRCVSREDRAMWIEALQCAKDLFPRALTSGDLATSEDIVVSTEKLRSRLS 251
IFTGTK LHLR +REDR W+EALQ KD+FPR S +A + ++ +STEK+R RL
Sbjct: 205 SIFTGTKRLHLRAETREDRTTWVEALQAVKDMFPRMSNSELMAPTNNLAMSTEKIRLRLI 264
Query: 252 QEGINEAIISDCESIMLSEVSYLQGKFKFLQQKHFMLLDTLKQLETEKIELETTVVDETK 311
+EG++E I DCE IM SE S LQ + L+QK ++L+DTL+QLETEK++LE TVVDE++
Sbjct: 265 EEGVSELAIQDCEQIMKSEFSALQSQLVLLKQKQWLLIDTLRQLETEKVDLENTVVDESQ 324
Query: 312 ERESYCGQVNRRFSDFYSVLSEGSATDSVADNE 344
+ R F G+AT+S DNE
Sbjct: 325 RQADNGCSGELRHEKF-----SGTATESDDDNE 352
>AT2G31020.1 | Symbols: ORP1A | OSBP(oxysterol binding
protein)-related protein 1A | chr2:13201668-13204682
FORWARD LENGTH=760
Length = 760
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 157/242 (64%), Gaps = 5/242 (2%)
Query: 72 EEPRDSKVFAGGGGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKD 131
E P D K+ G S+AGILYKWVNYGKGWR RWFVL+DGVLSYYKI GPDKI++ +
Sbjct: 58 EPPVDVKINDIAGNSIAGILYKWVNYGKGWRPRWFVLQDGVLSYYKIKGPDKIVVIHETE 117
Query: 132 RGVRVIGEESSKFVKKANWNLNRXXXXXXXXXXTKQCKPFGEIHXXXXXXXXXXXXXXXX 191
+G RVIGEES++ + + N+ + KPFGE+H
Sbjct: 118 KGSRVIGEESTRMISR-----NKRHAATNNTNHQLRRKPFGEVHLKVSSIRESRSDDKRF 172
Query: 192 XIFTGTKTLHLRCVSREDRAMWIEALQCAKDLFPRALTSGDLATSEDIVVSTEKLRSRLS 251
IFTGTK LHLR +REDR WIEALQ KD+FPR +A + ++ +S EKLR RL
Sbjct: 173 SIFTGTKRLHLRAETREDREAWIEALQAVKDMFPRMSNCELMAPTNNLDISIEKLRLRLV 232
Query: 252 QEGINEAIISDCESIMLSEVSYLQGKFKFLQQKHFMLLDTLKQLETEKIELETTVVDETK 311
+EG++E+ I DCE I SE S +Q + L+QK ++L+DTL+QLETEK++LE TVVDET+
Sbjct: 233 EEGVSESAIQDCEQITRSEFSAIQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDETQ 292
Query: 312 ER 313
+
Sbjct: 293 RQ 294
>AT1G77730.1 | Symbols: | Pleckstrin homology (PH) domain
superfamily protein | chr1:29214445-29215564 FORWARD
LENGTH=265
Length = 265
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 147/262 (56%), Gaps = 13/262 (4%)
Query: 42 CAFRSVSSAQDSSLAGGDSVKSSTAHD---DNDEEPRDSKVFAGGGGSVAGILYKWVNYG 98
A ++++ + +SL S +++ HD PR ++ G VAGILYKWVNYG
Sbjct: 6 AAKSNLTTTRSASLNIPHSTRTNHNHDLRYSLSAGPRTNEDRPASGNGVAGILYKWVNYG 65
Query: 99 KGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKDRGVRVIGEESSKFVKKANWNLNRXXXX 158
+GW+ RWFVL+DGVLSYY+IHGPDKI +S DR ++IG ES +F+ + +
Sbjct: 66 QGWKRRWFVLQDGVLSYYRIHGPDKISLSVEMDRRSKLIGGESLRFICRHS--------- 116
Query: 159 XXXXXXTKQCKPFGEIHXXXXXXXXXXXXXXXXXIFTGTKTLHLRCVSREDRAMWIEALQ 218
KP G+IH +FTGTK+LHLR + EDRA WIEAL+
Sbjct: 117 -KRGDVHSPGKPLGQIHLKVSSIGQSISDGKRFTVFTGTKSLHLRAATSEDRASWIEALK 175
Query: 219 CAKDLFPRALTSGDLATSEDIVVSTEKLRSRLSQEGINEAIISDCESIMLSEVSYLQGKF 278
K+ FPR +A++ ++ VST+KLR RL +E ++E II DCE IM + L +
Sbjct: 176 AVKETFPRMSNEELMASTTNVSVSTDKLRQRLMEEEVDETIIKDCEDIMKNNFLALHDEV 235
Query: 279 KFLQQKHFMLLDTLKQLETEKI 300
L++ + L+D+LK + I
Sbjct: 236 MSLKRYQYHLIDSLKNVSNSPI 257
>AT4G22540.1 | Symbols: ORP2A | OSBP(oxysterol binding
protein)-related protein 2A | chr4:11860969-11866108
REVERSE LENGTH=721
Length = 721
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 154/305 (50%), Gaps = 54/305 (17%)
Query: 1 MNPLCCIAPVSIDRDRPNPVVTKSPGQCQLGLDSTVRTTVNCAFRSVSSAQDSSLAGGDS 60
++PLCCI S P+ + ++SP + V A S SL GG
Sbjct: 6 LHPLCCITLES-----PHGINSQSPEE-----------PVTTALTRSRSLPAKSLTGGSE 49
Query: 61 VKSSTAHDDNDEEPRDSKVFAGGGGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHG 120
++ VAGILYKW N+GKGWRSRWF+L +G+LSY KI
Sbjct: 50 SET-----------------------VAGILYKWTNFGKGWRSRWFLLRNGILSYSKIRR 86
Query: 121 PDKI-LMSPAKDRGVRVIGEESSKFVKKANWNLNRXXXXXXXXXXTKQCKPFGEIHXXXX 179
P+ + L+SP D VR+IG+ S + + + + R KQ K G +H
Sbjct: 87 PENLNLLSPDDD--VRLIGDISGERLSRMDSCSGRR----------KQQKTVGIVHLKVS 134
Query: 180 XXXXXXXXXXXXXIFTGTKTLHLRCVSREDRAMWIEALQCAKDLFPRALTSGDLA--TSE 237
IFT TKTLHLR S DRA W++AL K +FP +GD + +
Sbjct: 135 SFRESKSDDRKFYIFTATKTLHLRTDSITDRAAWLQALASTKCIFPLRSLNGDFSFIPPK 194
Query: 238 DIVVSTEKLRSRLSQEGINEAIISDCESIMLSEVSYLQGKFKFLQQKHFMLLDTLKQLET 297
D+ +STE+L+ RL +EG+NE ++ +CE IMLSE S + G+ K L ++ LLD L+QLE
Sbjct: 195 DLSISTERLKKRLHEEGMNENLVKECEQIMLSEFSEMHGQVKLLHEERTNLLDALRQLEA 254
Query: 298 EKIEL 302
+E+
Sbjct: 255 ANLEV 259
>AT4G12460.1 | Symbols: ORP2B | OSBP(oxysterol binding
protein)-related protein 2B | chr4:7391400-7396056
FORWARD LENGTH=693
Length = 693
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 132/227 (58%), Gaps = 13/227 (5%)
Query: 84 GGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKI-LMSPAKDRGVRVIGEESS 142
G SVAGILYKW NYGKGWRSRWF+L DG+LSY KI P+ + L+SP+ D +R+IG+ S+
Sbjct: 25 GRSVAGILYKWTNYGKGWRSRWFLLRDGILSYSKIRRPENVNLLSPSDD--LRLIGDIST 82
Query: 143 KFVKKANWNLNRXXXXXXXXXXTKQCKPFGEIHXXXXXXXXXXXXXXXXXIFTGTKTLHL 202
+ + R K K G +H IFT TKTLHL
Sbjct: 83 DRLLRMKSCSGRSRR--------KHHKNIGIVHLKVSSYRESKSDHRKFYIFTATKTLHL 134
Query: 203 RCVSREDRAMWIEALQCAKDLFPRALTSGDLA--TSEDIVVSTEKLRSRLSQEGINEAII 260
R SR DRA W++AL + + P +GD + + +D+ +STE+L+ RL +EG+NE+++
Sbjct: 135 RTDSRSDRAAWLQALASTRGIVPLQSINGDFSFVSPKDLSISTERLKKRLFEEGMNESLV 194
Query: 261 SDCESIMLSEVSYLQGKFKFLQQKHFMLLDTLKQLETEKIELETTVV 307
+CE I+ SE +Q + K L ++ LLD L+QLE +E E + +
Sbjct: 195 KECEQIVDSEFCEVQEQIKLLHEERKKLLDALRQLEMANLEAEASGI 241